Sed0024277 (gene) Chayote v1

Overview


Name	Sed0024277
Type	gene
Organism	Sechium edule (Chayote v1)
Description	3'-5' exoribonuclease 1-like
Location	LG04: 309414 .. 316215 (-)
RNA-Seq Expression	Sed0024277
Synteny	Sed0024277

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCAAACTGCTTCCCTTCTCTCTCACGGCTCACCTTCCAGATCACCCCAGGTCTCTCTCTTCTCCGTTTTCAATTTCCCTTTATTTTTCCATTTAGTATGTGAATATATATGGCAATTCTTCGGCATAATTGATCTTGTAATCGGGTTTCTGTAGGAGGGAATTTCGGTGGTAGATCTGATGTACTTGGTGGTCGATCTCAATTACTCTCAAGATCATGATGGCCCTTGAACGCAAAGGTTTGTGTTTCCTTGAATCGTTTTTGGAACTGTTTAAGGTTTCTATTTACTGGTCATTAGTTTGGTTTTACGATCCAATCAGTTTAGTTTTGTGCTGATTTAGTCGCATTGCTCGAGGGGGATTCTGCGACTTTGTTTTGTATCTTTTCGAGCAATATCTAGAACTAGTAAAAATCTATGATTCTGTATAGCGTTGTTATTGCTTTTGAGATGAGAGTAGTTTCTGAAGGGGAATCGAGGAGTTAAGTGAAGAATTGAAATGGGTATTTTTTGTTATGGAATTTAGAGACCAGATGAGGCGAGGCGACTGATTGGAGATATTGATATACAACACATGTTTTTACAGATTGGGTTTTTGAGCACCGTACTGATAGTAGCTAAGAGTTTAGATGACAAGACCCATCAATCAGAAGTTTTTTACTTCAATGTTTCTTTAACATTTAAAGAGTAGGAATTGTGTTTACAGAGAATGATCATTTGGATTTTCTTCCTTTTTTGGGGAATTTGAATATTAAGGCTGAAGATTTAAAGGAGGTTTTATGTGCTAGTTTGGAATTGAATTGCTGGTGTTGTCTCCAAGATCACATTTGTTAGGGGTAAATGCAGTTAAAGATGTAGTTTCATAAATCTGGTTGGAACACAGTCAAAGGGTTTTTGAGAACAAACAAATTTATTGGTTAGATTGGTTCAAGTCAACTAGATTGAAAGCTCCACAATTGGACTTTTCTTTGCATGAAGTTTGTATGAAACTGAAGAACTTTCAGGGATAAGGAAACAAACCTAATTTCTTTTCTTCATTCTTTAGTTAATGTGGGCGTCTCTTGGTGTTAACAATTTAATCACTTTTTTCATTATAGCTATACCACCCTCCTTTCTTATGTATTTTTTTGAAACAAGGGTAACGACACCTGTCCCTAGGCCAGGCACTGGAAGACATCGAAGGAGTAATGTCACATCTGAGTCTCGAACCTGGGACCTTGAGGGGAGCATACCCTCAAAGCCCAAGTCTTCAACCACTGTAACTATCCCTTCGAGGAAAGCTTTTATTAACTTCTTACACCACGGAAATTGTTCTTATCCTATAAAAGAAAGAATATTTTGTATGAAATGCGAGGCTTTTATAGCTCATTAAAAGGACCCATGTTGGTCTATGGGTATAGTCTTTAATCTTATAAGCAATCCAGACAAGTAGAAGTTGGTAACCTATCAATGTCAGGTTGTAGGAAATGCTGAGACCGTCAGATGCAAAATTTGGATATCCTGATTCGAATTCTAGGCTTGAGGCGTTACCCATAGCCTGTAATTGGATGGTGTGATTTTCTTTGGAAGAGGGACATATCATATGAATTCACTATTAGACCAAAAAGATCAAGTGATAGGTTATCGAGGTTAAATCTTTACCCATACTTTTTTCTTTTAGTTCAACAACAATTGAGGATTGAGGATTCGAACCCATGATTTTTTTGTCATGAGATTTAATATTTGTAGAAGCTTATATATTTGAGGGTGATATCTATTCTTGTTTTTCTCCAAAAACACAAATGGTCTTCTAAATGTTTAAACTATATATTTTTATTGGATATTTTCTTTGTCATGTAAACGGTCGAACTTTTCATGTTCTCTATACAATGTTGAATTCATAATCATTTTAACTTCCTTTGCTTTTTTTGTTGCTTTCGTTGGTTTATGTTTATTTTTAATTATTTTTTATTTTATGATTAGATTAAATATTATTTTCTATTTTTCTTTTTATGATTAGACATTATCTTTTTCTTTTATGATTAGGTCATCTCTTGTAATCTATTTAAAACTAATATTGAGTTCATTATTAAATAAGAATTTGAAGAATTTGAAATCCATCTTTCAGCATGGTATCAAAATCTCAAAGTTTTCGTTTTGATCCAGATAAACCTTTTCCTCTTCTCCTTTCCACTTTCTTCATCATCCTGGTACGAATCCATCCCAATTGGTCTTCTCCAGGTTTCCCAATTGGCCCTTCTTCAGCTTTTCTAATTGGCCCTTATTCAACTTTCCCAATTGGCTTATTCAGCTTGCCCTTATCCATCTTTCCCAATTGACCTTTATATCTAGGTTTCCCAATTGACCTTTATATCCAGCTTTCCAATTGGTCCTTATCCAACTTTCCCAATTCCCAGTTGGCCGCGCTTTTTCCATTTGCAGGTACTTTTCTCATTTGGCGGTGCTTTTCCGAGTTGGCAATTATTATTCCAATTGGCGCATCATCATCCTAGTTGGTACATCATCATCCCAATTTGCGCATCATCATCCAAATTCAATTCACATCACCATCAAATTGCAGAGTATTATCGAGGACCAATTCGATAAAATTAACTTCAAGGTTGAGGGGGAGTGTTGGTTTATGTTTATTTTAATATTTTAGTATTTTTATCTTTATAATTATTTTTTTCTTTTCGTTTCATGATTAGATATTATCTTTTCCTTTTATGATTAGGTCATCTCTTGTAGTTTATTTAAGTCTAATATTGGGTTCATTATTAAACAAGAATTTGAATTTCATTTTTCGACATCTTTGTTTGCAGAAAGTACGCAGAGGAACTGTGAGGCCTCTATAAATTGCCTCCAGAACAATGGAATTCCATTTAGTTTGCAACATGGTGTAAATTCTGTTGATGGGTTCCAGGAACATACAGATGAAATTAGTTGTCATGCCAGCAATGATATTCCTCAAACAAACCATCCGCTGGTTAACAATTTCATAGAGCGTCCAAATGAATTTCACAATAAACCTGCTTTTCAGCATAATTCTGGACCATGGCCAGCCTTCCATTTTGACTCTCAAAAGGTGCAGCAGTTCCAGATGAGTGCTTCCGAATGCCAGTTCTACTCTTTGCCAGTGGAGAATCGCTTCCATTATGTTCCTTTCAAAATGTTTGAACAAAATTACCATTGCGATCTTCGGTTGCAAGAATTTCAATATTTTGTGGTTATAGACTTTGAGGCAACATGTGATAAAGATAAAAACCCCCATCCACAGGAGATAATTGAGTTCCCATCTGTCATTGTTAGCAGTGTGACTGGCCAACTGGAAGCTTGCTTTCAGACATATGTGCGCCCAACTTGCAATCAGCACTTGAGCGATTTCTGCAGGGATCTAACTGGAATTCAGCAAATTCAGGTTTGTTCAAAGCTTAGCTTATTTTTTCTTCAAATAAAATAAGAGTCAGGGTAATTTTTATCTTCTCTTATTCACTTTTCCAATATTTTTTCATATTTTTAGTTTGGTACAAAGTTTTCTTTTGATAATTTTGTCAAATTTCTGATGTTGTAATTTAGGTGCTTTGAAGTTCTGGTTCAACCATGTGCCCTACCCACCATTTAGAATAGGGTGTTAATGGGTTTGTTTGACTAAGATATAGACTAGAATTGAACAAGAAGACTCTAATTCCCCTTACACGTGACATTGATTCTCTTTAAGGCACTTCCCTTTCCTTAATGTTGAAATGGGAAGATTCTCCTTTCTTCTATATTGATTGTCATGTTTTTCCCCAAGTATTTACTTAGATGGAACATTTAAGGGATCTGGGGTTCCATGAAACTAGATCTTTGGAGTCTTATTCTGTTTCCTTAACCATCTGGGTTGGCTGAATGGCCAAAAATGGCCTTGGGTATTTAGGAGGTTATGAGTTCCATCCATGTTGACCAATTACCAAGGAATTAATTTCCTACGTGTTACCTCGACAACCAAATGTTGTAGGATCAGACGATTTGTCCCGTGAAAATAGTTGAAGTGTGGTCTGACTCTCACGAATATATATATATATATATATATGTAGGAATTAATTTCCTACATATAATTTTATATATATATATATATTAAATTATGTTTCCTTTATAATTCTACTTCATCATTGCTTATCTGGTTTAAGACCTTATGATTTTTATCTAATCTCATTGCTACCTATAGGTGGACAGAGGTGTTACTCTCAATGAAGCTCTTCTCAGGCATGATAAATGGCTTGAAAACAAGGGGATAAAGAATACAAATTTTGCAGTGGTGACTTGGTCAAACTGGGATTGCCGAGTCATGTTAGAATCAGAATGCCGTTTCAAGAAAATTAGGAAGCCTCCATATTTCAACCGGTAAATGACCCGTATAGAAATTGTTTCTTCATATGGCACAAATAATAATTAAAATCATATCACCCTAAACAATCTCGAACTTGAAAGTGGTACTAGAAGACCACAAAATCCAGGGAGGAAATGAATTTTAATGCTAGTCATTGTAGGAGCATCCACACATTTGGAGCATAAAATCTCCCAGGAAAACAAATCAATTAGTTAGGCCCCGTTTGATAACCATTTTGTTTTTAATTTTTGGTTTTTGAAATTTAAGCCTACAACAACTATCTTACCCTTTTTTTTTCTCACTTGGATATATACATTTTACCTATATTGTTAGAAACCAAACCAAAATTTGGAAACAAAAAAAAGTAGCTTCCAAAAGTTTGTTTTTGTTTTTGAAATGTGGTTAGCATTTACTTACTTTCTTAAGGAAAGATGAATACAGATACATTGTAGGAAAGATGGAACACATTATAGGAAATATGAGTAAAAATAGGCTTAAATTTCAAAAACCAAAAACAGAAAACTAAGGCCTCGTTTGATAACCATTTCGTTTTTTTTTGTTTCTAGTTTTTCATTTTTTGTTTTTGGTTTTTTCTTTTAAAAAATAAAAACTGTACATGTTTGATAACTGATTTTAGTTTTATGTTTTAAAAAACTAAAAACCAAAAAACATGTTTGATAACTATTTTTTGTTTTTCAAACATCACATTTTGTTTTGATTTTTTTAGTTTTTACTATTTATTCTTGATTTTTTCATTCTTTTTTAAAAACGAAAATAAAACTTGTTTTTAAAAGCTAGTTTTTTTAGCTTTTAGAATTCCTTTAATAATTTTAAAACGTTTATAAAATTTTAAAAACAAAAACCAAAATGGTTATCAAACAAACCTGTTTTTAAAATATTAAAAACGAAAACAAAAAATTAAAAACGAAATGATTATTAAACGGGACTTAAATAATTATCAAACGGGGTCTTAATAATTGATAATGATACTTCACCAGTTAACAATTTGCCAATTCCAAATTTGTCAGCTTTAGGTGGTGGTGCAAATTTTTTCCTCAATCGTAATAGAGTGTTCATCAATTTTGTTAAAATAAAACTTCAGTGTGAAAATTTCCAACATTTAGTTGAAAAGCGCCATTTATTTGGCTTTAAATGGACTGTTATAGCCATCTTCATGTAGAACACTTTCCTTTTGTATTGTTCGTTGACAGGCAGTTTCTTATTCTAAGTACAAAAACATACATTCAATAAGAAATGATGTTTGTCTGCATGAAACACAATGTTACCACCATGATGCCAACGACTTCTATTTATAGTTATATTTAGTTCTTACTTCTCTTCTAATTTGATTGACAGATGGATCAACTTAAAAATTCCGTTCGGTGAGGCTTTCGGTGGGCAGCGATGCAATCTAAAAGAAGCCGTTGAGATGGCAGGCTTAGCTTGGCAAGGTCGTGCACACTGCGGTCTTGATGATGCCAAGAACACTGCTCGTTTACTCGCTCTTCTTATGCACAGAGGCTTCAGACTCTCCATCACCAATTCATTGATGTGGCAGACTTCTGACTGCCCATTGCAATGGAAACTACAATCTCCAGAAGCCATGACACTCCCTCCGCAACCGCCAATGAAACCGAAGCCCGTGCACCTTCCTTGTGTCCAGTACTACCGGCACTGTTTCTGCGGGGTTAGGAGCAGCAGAGGCATGGTTCGCAAGCCGGGGCCGAAGCAGGGAAGCTTTTTCTTTGGCTGTGGGAACTGGACTGCCACCAAGGGGGCACGTTGCCAATACTTCGAATGGGCGTCTCCCTGATGGTGATGATGATGATGCATGACGAAAAAGGTTTATGAATCTTCTCTTCTTTGAAGCGTTTGCTAAATGAATTTATGTAAAAAAAGAAAACTAAAAATAAAGAAAAAGAGTAAGAAAAAATGTACTGGAAGATATGAAGTTTGATGATCTCTGTCTCCTGGTAGAGAAGGTGCTTGGCGAGGTTTCTGAGTCATACAGAATTTAGATGAGTTGGTGGTTAAAAGAAAAGTGGTTCAAGCTTTTTGGGAGCCGTTCAACATGTAAAGCTGACTTTTTTAATTGACTGGAGAACCTATTGGGGTGTGAGTTTCTAGAGTCGATGATGGGTAGTGTTAGGATGGTTGGTGCTTTTATAATGAGGCATGCTAAATTATCTGAATAATCTTTTGGATAGTTATGCTCTGCTTTTTATTTTTATTATTTAATCTTAATCTAATGGCAATCAATAGAATTGCTTATTATCAACATCCCCGCCTGGTTTTTTAATTGCTTTTATTGTTTGTTACTCTGCCTTTTAGATTTTTTGTTTTTTTGTAAGCTTACGATTGGAGTTTTGCCCCTCTACTTATTTGGAGGCACTTATACCCGCTTCAAGGTCCGGACTCAAGAGACAACAATAAATTTCTCATTCATGGGTTCGAAA

mRNA sequence

CCCAAACTGCTTCCCTTCTCTCTCACGGCTCACCTTCCAGATCACCCCAGGAGGGAATTTCGGTGGTAGATCTGATGTACTTGGTGGTCGATCTCAATTACTCTCAAGATCATGATGGCCCTTGAACGCAAAGAAAGTACGCAGAGGAACTGTGAGGCCTCTATAAATTGCCTCCAGAACAATGGAATTCCATTTAGTTTGCAACATGGTGTAAATTCTGTTGATGGGTTCCAGGAACATACAGATGAAATTAGTTGTCATGCCAGCAATGATATTCCTCAAACAAACCATCCGCTGGTTAACAATTTCATAGAGCGTCCAAATGAATTTCACAATAAACCTGCTTTTCAGCATAATTCTGGACCATGGCCAGCCTTCCATTTTGACTCTCAAAAGGTGCAGCAGTTCCAGATGAGTGCTTCCGAATGCCAGTTCTACTCTTTGCCAGTGGAGAATCGCTTCCATTATGTTCCTTTCAAAATGTTTGAACAAAATTACCATTGCGATCTTCGGTTGCAAGAATTTCAATATTTTGTGGTTATAGACTTTGAGGCAACATGTGATAAAGATAAAAACCCCCATCCACAGGAGATAATTGAGTTCCCATCTGTCATTGTTAGCAGTGTGACTGGCCAACTGGAAGCTTGCTTTCAGACATATGTGCGCCCAACTTGCAATCAGCACTTGAGCGATTTCTGCAGGGATCTAACTGGAATTCAGCAAATTCAGGTGGACAGAGGTGTTACTCTCAATGAAGCTCTTCTCAGGCATGATAAATGGCTTGAAAACAAGGGGATAAAGAATACAAATTTTGCAGTGGTGACTTGGTCAAACTGGGATTGCCGAGTCATGTTAGAATCAGAATGCCGTTTCAAGAAAATTAGGAAGCCTCCATATTTCAACCGATGGATCAACTTAAAAATTCCGTTCGGTGAGGCTTTCGGTGGGCAGCGATGCAATCTAAAAGAAGCCGTTGAGATGGCAGGCTTAGCTTGGCAAGGTCGTGCACACTGCGGTCTTGATGATGCCAAGAACACTGCTCGTTTACTCGCTCTTCTTATGCACAGAGGCTTCAGACTCTCCATCACCAATTCATTGATGTGGCAGACTTCTGACTGCCCATTGCAATGGAAACTACAATCTCCAGAAGCCATGACACTCCCTCCGCAACCGCCAATGAAACCGAAGCCCGTGCACCTTCCTTGTGTCCAGTACTACCGGCACTGTTTCTGCGGGGTTAGGAGCAGCAGAGGCATGGTTCGCAAGCCGGGGCCGAAGCAGGGAAGCTTTTTCTTTGGCTGTGGGAACTGGACTGCCACCAAGGGGGCACGTTGCCAATACTTCGAATGGGCGTCTCCCTGATGGTGATGATGATGATGCATGACGAAAAAGGTTTATGAATCTTCTCTTCTTTGAAGCGTTTGCTAAATGAATTTATGTAAAAAAAGAAAACTAAAAATAAAGAAAAAGAGTAAGAAAAAATGTACTGGAAGATATGAAGTTTGATGATCTCTGTCTCCTGGTAGAGAAGGTGCTTGGCGAGGTTTCTGAGTCATACAGAATTTAGATGAGTTGGTGGTTAAAAGAAAAGTGGTTCAAGCTTTTTGGGAGCCGTTCAACATGTAAAGCTGACTTTTTTAATTGACTGGAGAACCTATTGGGGTGTGAGTTTCTAGAGTCGATGATGGGTAGTGTTAGGATGGTTGGTGCTTTTATAATGAGGCATGCTAAATTATCTGAATAATCTTTTGGATAGTTATGCTCTGCTTTTTATTTTTATTATTTAATCTTAATCTAATGGCAATCAATAGAATTGCTTATTATCAACATCCCCGCCTGGTTTTTTAATTGCTTTTATTGTTTGTTACTCTGCCTTTTAGATTTTTTGTTTTTTTGTAAGCTTACGATTGGAGTTTTGCCCCTCTACTTATTTGGAGGCACTTATACCCGCTTCAAGGTCCGGACTCAAGAGACAACAATAAATTTCTCATTCATGGGTTCGAAA

Coding sequence (CDS)

ATGATGGCCCTTGAACGCAAAGAAAGTACGCAGAGGAACTGTGAGGCCTCTATAAATTGCCTCCAGAACAATGGAATTCCATTTAGTTTGCAACATGGTGTAAATTCTGTTGATGGGTTCCAGGAACATACAGATGAAATTAGTTGTCATGCCAGCAATGATATTCCTCAAACAAACCATCCGCTGGTTAACAATTTCATAGAGCGTCCAAATGAATTTCACAATAAACCTGCTTTTCAGCATAATTCTGGACCATGGCCAGCCTTCCATTTTGACTCTCAAAAGGTGCAGCAGTTCCAGATGAGTGCTTCCGAATGCCAGTTCTACTCTTTGCCAGTGGAGAATCGCTTCCATTATGTTCCTTTCAAAATGTTTGAACAAAATTACCATTGCGATCTTCGGTTGCAAGAATTTCAATATTTTGTGGTTATAGACTTTGAGGCAACATGTGATAAAGATAAAAACCCCCATCCACAGGAGATAATTGAGTTCCCATCTGTCATTGTTAGCAGTGTGACTGGCCAACTGGAAGCTTGCTTTCAGACATATGTGCGCCCAACTTGCAATCAGCACTTGAGCGATTTCTGCAGGGATCTAACTGGAATTCAGCAAATTCAGGTGGACAGAGGTGTTACTCTCAATGAAGCTCTTCTCAGGCATGATAAATGGCTTGAAAACAAGGGGATAAAGAATACAAATTTTGCAGTGGTGACTTGGTCAAACTGGGATTGCCGAGTCATGTTAGAATCAGAATGCCGTTTCAAGAAAATTAGGAAGCCTCCATATTTCAACCGATGGATCAACTTAAAAATTCCGTTCGGTGAGGCTTTCGGTGGGCAGCGATGCAATCTAAAAGAAGCCGTTGAGATGGCAGGCTTAGCTTGGCAAGGTCGTGCACACTGCGGTCTTGATGATGCCAAGAACACTGCTCGTTTACTCGCTCTTCTTATGCACAGAGGCTTCAGACTCTCCATCACCAATTCATTGATGTGGCAGACTTCTGACTGCCCATTGCAATGGAAACTACAATCTCCAGAAGCCATGACACTCCCTCCGCAACCGCCAATGAAACCGAAGCCCGTGCACCTTCCTTGTGTCCAGTACTACCGGCACTGTTTCTGCGGGGTTAGGAGCAGCAGAGGCATGGTTCGCAAGCCGGGGCCGAAGCAGGGAAGCTTTTTCTTTGGCTGTGGGAACTGGACTGCCACCAAGGGGGCACGTTGCCAATACTTCGAATGGGCGTCTCCCTGA

Protein sequence

MMALERKESTQRNCEASINCLQNNGIPFSLQHGVNSVDGFQEHTDEISCHASNDIPQTNHPLVNNFIERPNEFHNKPAFQHNSGPWPAFHFDSQKVQQFQMSASECQFYSLPVENRFHYVPFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKIPFGEAFGGQRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFRLSITNSLMWQTSDCPLQWKLQSPEAMTLPPQPPMKPKPVHLPCVQYYRHCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCQYFEWASP

Homology

[Close]

BLAST of Sed0024277 vs. NCBI nr
Match: XP_022997162.1 (3'-5' exoribonuclease 1-like [Cucurbita maxima])

HSP 1 Score: 814.3 bits (2102), Expect = 4.8e-232
Identity = 381/416 (91.59%), Postives = 389/416 (93.51%), Query Frame = 0


Query: 1   MMALERKESTQRNCEASINCLQNNGIPFSLQHGVNSVDGFQEHTDEISCHASNDIPQTNH 60
           MMALERKES QRNCEASI CLQNNGIPFSLQH  NS DGFQE TDEISCH SNDIP+TNH
Sbjct: 1   MMALERKESMQRNCEASIKCLQNNGIPFSLQHSGNSADGFQELTDEISCHGSNDIPETNH 60

Query: 61  PLVNNFIERPNEFHNKPAFQHNSGPWPAFHFDSQKVQQFQMSASECQFYSLPVENRFHYV 120
            L NNFIERPNEFHNKPA+QHNSG W AFHFDSQKVQQ QMSASECQFYSLPVENRF Y 
Sbjct: 61  LLANNFIERPNEFHNKPAYQHNSGSWQAFHFDSQKVQQCQMSASECQFYSLPVENRFQYF 120

Query: 121 PFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACF 180
           PFKMFEQNYHCD RLQEFQYFVVIDFEATCDKD+NPHPQEIIEFPSVIVSSVTGQLEACF
Sbjct: 121 PFKMFEQNYHCDRRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACF 180

Query: 181 QTYVRPTCNQHLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLENKGIKNTNFAVVTWS 240
           QTYVRPTCNQ LSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLE KGIKNTNFAVVTWS
Sbjct: 181 QTYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWS 240

Query: 241 NWDCRVMLESECRFKKIRKPPYFNRWINLKIPFGEAFGGQRCNLKEAVEMAGLAWQGRAH 300
           NWDCRVMLESECRFKKIRKPPYFNRWINLK+PF E FGG +CNLKEAVEMAGLAWQGRAH
Sbjct: 241 NWDCRVMLESECRFKKIRKPPYFNRWINLKLPFREVFGGAQCNLKEAVEMAGLAWQGRAH 300

Query: 301 CGLDDAKNTARLLALLMHRGFRLSITNSLMWQTSDCPLQWKLQSPEAMTLPPQPPMKPKP 360
           CGLDDAKNTARLLALLMHRGFR SITNSLMWQTSDCP QWK QSPEAMTLPPQPPMKPKP
Sbjct: 301 CGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWK-QSPEAMTLPPQPPMKPKP 360

Query: 361 VHLPCVQYYRHCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCQYFEWASP 417
           VH+P +QYY +CFCGVRSSRGMVRKPGPKQGS FFGCGNWTATKGARC YFEWASP
Sbjct: 361 VHVPIIQYYPYCFCGVRSSRGMVRKPGPKQGSCFFGCGNWTATKGARCHYFEWASP 415

[Close]

BLAST of Sed0024277 vs. NCBI nr
Match: KAG6585276.1 (ERI1 exoribonuclease 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020195.1 ERI1 exoribonuclease 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 811.2 bits (2094), Expect = 4.1e-231
Identity = 375/416 (90.14%), Postives = 388/416 (93.27%), Query Frame = 0


Query: 1   MMALERKESTQRNCEASINCLQNNGIPFSLQHGVNSVDGFQEHTDEISCHASNDIPQTNH 60
           MMALERKES QRNCEASI CLQNNG+PFSLQH  NSVDGFQE TDEISC++SNDIP+TNH
Sbjct: 1   MMALERKESMQRNCEASIKCLQNNGMPFSLQHSGNSVDGFQERTDEISCYSSNDIPETNH 60

Query: 61  PLVNNFIERPNEFHNKPAFQHNSGPWPAFHFDSQKVQQFQMSASECQFYSLPVENRFHYV 120
           PLVNNFIERPNEFHNKPA+QHNSG WPAFHFDSQKVQQ QMSASECQFYSLPVENRFHYV
Sbjct: 61  PLVNNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQMSASECQFYSLPVENRFHYV 120

Query: 121 PFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACF 180
           PFKMFEQNYHCD RLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACF
Sbjct: 121 PFKMFEQNYHCDFRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACF 180

Query: 181 QTYVRPTCNQHLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLENKGIKNTNFAVVTWS 240
           QTYVRPTCNQ LSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLE KGIKN NFAVVTWS
Sbjct: 181 QTYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNANFAVVTWS 240

Query: 241 NWDCRVMLESECRFKKIRKPPYFNRWINLKIPFGEAFGGQRCNLKEAVEMAGLAWQGRAH 300
           NWDCRVMLESECRFKKIRKP YFNRWINLKIPF E FGGQRCNLKEAVEMAGL+WQGRAH
Sbjct: 241 NWDCRVMLESECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGRAH 300

Query: 301 CGLDDAKNTARLLALLMHRGFRLSITNSLMWQTSDCPLQWKLQSPEAMTLPPQPPMKPKP 360
           CGLDDAKNTARLLALLMHRGFR SITNSLMWQTSDCP QWK Q P  +T PPQPP+K KP
Sbjct: 301 CGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQQPPGGVTFPPQPPLKSKP 360

Query: 361 VHLPCVQYYRHCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCQYFEWASP 417
           +H+P   Y+ +C CGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARC YF+WASP
Sbjct: 361 MHIPIFHYHPYCICGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFQWASP 416

[Close]

BLAST of Sed0024277 vs. NCBI nr
Match: XP_023537711.1 (3'-5' exoribonuclease 1-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 810.1 bits (2091), Expect = 9.1e-231
Identity = 374/416 (89.90%), Postives = 388/416 (93.27%), Query Frame = 0


Query: 1   MMALERKESTQRNCEASINCLQNNGIPFSLQHGVNSVDGFQEHTDEISCHASNDIPQTNH 60
           MMALERKES QRNCEASI CLQNNG+PFSLQH  NSVDGFQE TDEISC++SNDIP+TNH
Sbjct: 1   MMALERKESMQRNCEASIKCLQNNGMPFSLQHSGNSVDGFQERTDEISCYSSNDIPETNH 60

Query: 61  PLVNNFIERPNEFHNKPAFQHNSGPWPAFHFDSQKVQQFQMSASECQFYSLPVENRFHYV 120
           PLVNNFIERPNEFHNKPA+QHNSG WPAFHFDSQKVQQ QMSASECQFYSLP+ENRFHYV
Sbjct: 61  PLVNNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQMSASECQFYSLPLENRFHYV 120

Query: 121 PFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACF 180
           PFKMFEQNYHCD RLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACF
Sbjct: 121 PFKMFEQNYHCDFRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACF 180

Query: 181 QTYVRPTCNQHLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLENKGIKNTNFAVVTWS 240
           QTYVRPTCNQ LSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLE KGIKN NFAVVTWS
Sbjct: 181 QTYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNANFAVVTWS 240

Query: 241 NWDCRVMLESECRFKKIRKPPYFNRWINLKIPFGEAFGGQRCNLKEAVEMAGLAWQGRAH 300
           NWDCRVMLESECRFKKIRKP YFNRWINLKIPF E FGGQRCNLKEAVEMAGL+WQGRAH
Sbjct: 241 NWDCRVMLESECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGRAH 300

Query: 301 CGLDDAKNTARLLALLMHRGFRLSITNSLMWQTSDCPLQWKLQSPEAMTLPPQPPMKPKP 360
           CGLDDAKNTARLLALLMHRGFR SITNSLMWQTSDCP QWK Q P  +T PPQPP+K KP
Sbjct: 301 CGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQQPPGGVTFPPQPPLKSKP 360

Query: 361 VHLPCVQYYRHCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCQYFEWASP 417
           +H+P   Y+ +C CGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARC YF+WASP
Sbjct: 361 MHIPIFHYHPYCICGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFQWASP 416

[Close]

BLAST of Sed0024277 vs. NCBI nr
Match: XP_022951243.1 (3'-5' exoribonuclease 1-like isoform X2 [Cucurbita moschata] >XP_022951244.1 3'-5' exoribonuclease 1-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 809.3 bits (2089), Expect = 1.5e-230
Identity = 374/416 (89.90%), Postives = 387/416 (93.03%), Query Frame = 0


Query: 1   MMALERKESTQRNCEASINCLQNNGIPFSLQHGVNSVDGFQEHTDEISCHASNDIPQTNH 60
           MMALERKES QRNCEASI CLQNNG+PFSLQH  NSVDGFQE TDEISC++ NDIP+TNH
Sbjct: 1   MMALERKESMQRNCEASIKCLQNNGMPFSLQHSGNSVDGFQERTDEISCYSRNDIPETNH 60

Query: 61  PLVNNFIERPNEFHNKPAFQHNSGPWPAFHFDSQKVQQFQMSASECQFYSLPVENRFHYV 120
           PLVNNFIERPNEFHNKPA+QHNSG WPAFHFDSQKVQQ QMSASECQFYSLPVENRFHYV
Sbjct: 61  PLVNNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQMSASECQFYSLPVENRFHYV 120

Query: 121 PFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACF 180
           PFKMFEQNYHCD RLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACF
Sbjct: 121 PFKMFEQNYHCDFRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACF 180

Query: 181 QTYVRPTCNQHLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLENKGIKNTNFAVVTWS 240
           QTYVRPTCNQ LSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLE KGIKN NFAVVTWS
Sbjct: 181 QTYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNANFAVVTWS 240

Query: 241 NWDCRVMLESECRFKKIRKPPYFNRWINLKIPFGEAFGGQRCNLKEAVEMAGLAWQGRAH 300
           NWDCRVMLESECRFKKIRKP YFNRWINLKIPF E FGGQRCNLKEAVEMAGL+WQGRAH
Sbjct: 241 NWDCRVMLESECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGRAH 300

Query: 301 CGLDDAKNTARLLALLMHRGFRLSITNSLMWQTSDCPLQWKLQSPEAMTLPPQPPMKPKP 360
           CGLDDAKNTARLLALLMHRGFR SITNSLMWQTSDCP QWK Q P  +T PPQPP+K KP
Sbjct: 301 CGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQQPPGGVTFPPQPPLKSKP 360

Query: 361 VHLPCVQYYRHCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCQYFEWASP 417
           +H+P   Y+ +C CGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARC YF+WASP
Sbjct: 361 MHIPIFHYHPYCICGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFQWASP 416

[Close]

BLAST of Sed0024277 vs. NCBI nr
Match: XP_023546233.1 (uncharacterized protein LOC111805389 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 808.9 bits (2088), Expect = 2.0e-230
Identity = 379/416 (91.11%), Postives = 388/416 (93.27%), Query Frame = 0


Query: 1   MMALERKESTQRNCEASINCLQNNGIPFSLQHGVNSVDGFQEHTDEISCHASNDIPQTNH 60
           MMALERKES QRNCEASI CLQNNGIPFSLQH  NS DGFQE +DEISCH SNDIP+TNH
Sbjct: 1   MMALERKESMQRNCEASIKCLQNNGIPFSLQHSGNSADGFQEISDEISCHGSNDIPETNH 60

Query: 61  PLVNNFIERPNEFHNKPAFQHNSGPWPAFHFDSQKVQQFQMSASECQFYSLPVENRFHYV 120
            L NNFIERPNEFHNKPA+QHNSG W AFHFDSQKVQQ QMSASECQFYSLPVENRF YV
Sbjct: 61  LLANNFIERPNEFHNKPAYQHNSGSWQAFHFDSQKVQQCQMSASECQFYSLPVENRFQYV 120

Query: 121 PFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACF 180
           PFKMFEQNYHCD RLQEFQYFVVIDFEATCDKD+NPHPQEIIEFPSVIVSSVTGQLEACF
Sbjct: 121 PFKMFEQNYHCDRRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACF 180

Query: 181 QTYVRPTCNQHLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLENKGIKNTNFAVVTWS 240
           QTYVRPTCNQ LSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLE KGIKNTNFAVVTWS
Sbjct: 181 QTYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWS 240

Query: 241 NWDCRVMLESECRFKKIRKPPYFNRWINLKIPFGEAFGGQRCNLKEAVEMAGLAWQGRAH 300
           NWDCRVMLESECRFKKIRKPPYFNRWINLK+PF E FGG +CNLKEAVEMAGLAWQGRAH
Sbjct: 241 NWDCRVMLESECRFKKIRKPPYFNRWINLKLPFREVFGGAQCNLKEAVEMAGLAWQGRAH 300

Query: 301 CGLDDAKNTARLLALLMHRGFRLSITNSLMWQTSDCPLQWKLQSPEAMTLPPQPPMKPKP 360
           CGLDDAKNTARLLALLMHRGFR SITNSLMWQTSDCP QWK QSP AMTL PQPPMKPKP
Sbjct: 301 CGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWK-QSPGAMTLTPQPPMKPKP 360

Query: 361 VHLPCVQYYRHCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCQYFEWASP 417
           VH+P +QYY +CFCGVRSSRGMVRKPGPKQGS FFGCGNWTATKGARC YFEWASP
Sbjct: 361 VHVPIIQYYPYCFCGVRSSRGMVRKPGPKQGSCFFGCGNWTATKGARCHYFEWASP 415

[Close]

BLAST of Sed0024277 vs. ExPASy Swiss-Prot
Match: A8K979 (ERI1 exoribonuclease 2 OS=Homo sapiens OX=9606 GN=ERI2 PE=2 SV=2)

HSP 1 Score: 162.5 bits (410), Expect = 1.0e-38
Identity = 88/211 (41.71%), Postives = 126/211 (59.72%), Query Frame = 0


Query: 136 QEFQYFVVIDFEATCDKD-KNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSD 195
           Q F Y +VIDFE+TC  D K+ H QEIIEFP+V++++ TGQ+++ FQ YV+P  +  LS+
Sbjct: 32  QLFDYLIVIDFESTCWNDGKHHHSQEIIEFPAVLLNTSTGQIDSEFQAYVQPQEHPILSE 91

Query: 196 FCRDLTGIQQIQVDRGVTLNEALLRHDKWLEN-KGIKNTNFAV---------------VT 255
           FC +LTGI+Q QVD GV L   L +  KW+   +  KN  FA                VT
Sbjct: 92  FCMELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGISEPSASEVKLCAFVT 151

Query: 256 WSNWDCRVMLESECRFKKIRKPPYFNRWINLKIPFGEAFGGQRCNLKEAVEMAGLAWQGR 315
           WS+WD  V LE EC+ K++ KP + N WI+L+  +   +  +   L  A++  G+ + GR
Sbjct: 152 WSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYRRKPKGLSGALQEVGIEFSGR 211

Query: 316 AHCGLDDAKNTARLLALLMHRGFRLSITNSL 330
            H GLDD++NTA L   ++  G  + IT SL
Sbjct: 212 EHSGLDDSRNTALLAWKMIRDGCVMKITRSL 242

[Close]

BLAST of Sed0024277 vs. ExPASy Swiss-Prot
Match: Q5HZL1 (ERI1 exoribonuclease 2 OS=Xenopus laevis OX=8355 GN=eri2 PE=2 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 3.8e-38
Identity = 85/210 (40.48%), Postives = 125/210 (59.52%), Query Frame = 0


Query: 136 QEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDF 195
           Q F+Y ++IDFE+TC KD     QEIIEFP+V+++   G++E+ F TYV+P  +  LSDF
Sbjct: 33  QFFEYLIIIDFESTCWKDGKHSTQEIIEFPAVLLNVSNGEIESEFHTYVQPQEHPILSDF 92

Query: 196 CRDLTGIQQIQVDRGVTLNEALLRHDKWLE----NKGI------------KNTNFAVVTW 255
           C +LTGI Q QVD GV L   L + + W++     KGI            ++   A VTW
Sbjct: 93  CTELTGINQQQVDDGVPLKICLSQFNSWIQKLQKEKGIAFVTAVPTHSTAEHKMCAFVTW 152

Query: 256 SNWDCRVMLESECRFKKIRKPPYFNRWINLKIPFGEAFGGQRCNLKEAVEMAGLAWQGRA 315
           S+WD  V L  ECR K+++KP   N WI+L+  +   +  +   L  A++  G+ + GR 
Sbjct: 153 SDWDLGVCLLYECRRKQMKKPDILNSWIDLRATYKLFYNRRPKGLNGALQDLGIEFSGRE 212

Query: 316 HCGLDDAKNTARLLALLMHRGFRLSITNSL 330
           H GLDD++NTA+L + ++  G  + IT SL
Sbjct: 213 HSGLDDSRNTAKLASRMICDGCVMKITKSL 242

[Close]

BLAST of Sed0024277 vs. ExPASy Swiss-Prot
Match: Q5BKS4 (ERI1 exoribonuclease 2 OS=Mus musculus OX=10090 GN=Eri2 PE=2 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 7.1e-37
Identity = 83/211 (39.34%), Postives = 123/211 (58.29%), Query Frame = 0


Query: 136 QEFQYFVVIDFEATCDKDKNPHPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSD 195
           Q + Y +V+DFE+TC  D   H   EIIEFP+V++++ TG++E+ F  YV+P  +  LS+
Sbjct: 32  QLYAYLIVVDFESTCWNDGKHHSSPEIIEFPAVLLNTATGEIESEFHAYVQPQEHPILSE 91

Query: 196 FCRDLTGIQQIQVDRGVTLNEALLRHDKWLENKGIKNT-NFAV---------------VT 255
           FC +LTGI+Q+QVD GV L   L +  KW+     + T +FA                VT
Sbjct: 92  FCTELTGIKQVQVDEGVPLKICLSQFCKWIHKLQQQQTISFAAGDSEPSTSEVKLCAFVT 151

Query: 256 WSNWDCRVMLESECRFKKIRKPPYFNRWINLKIPFGEAFGGQRCNLKEAVEMAGLAWQGR 315
           WS+WD  V LE ECR K++ KP + N WI+L+  +   +  +   L  A++  G+ + GR
Sbjct: 152 WSDWDLGVCLEYECRRKQLLKPVFLNSWIDLRATYRLFYKRKPKGLSGALQEVGIEFSGR 211

Query: 316 AHCGLDDAKNTARLLALLMHRGFRLSITNSL 330
            H GLDD++NTA L   ++  G  + IT SL
Sbjct: 212 EHSGLDDSRNTALLAWKMIRDGCLMKITRSL 242

[Close]

BLAST of Sed0024277 vs. ExPASy Swiss-Prot
Match: Q8IV48 (3'-5' exoribonuclease 1 OS=Homo sapiens OX=9606 GN=ERI1 PE=1 SV=3)

HSP 1 Score: 148.7 bits (374), Expect = 1.5e-34
Identity = 82/227 (36.12%), Postives = 123/227 (54.19%), Query Frame = 0


Query: 138 FQYFVVIDFEATCDKDKNPH-PQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFC 197
           + Y  +IDFEATC++   P    EIIEFP V++++ T ++E  FQ YVRP  N  LSDFC
Sbjct: 127 YDYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFC 186

Query: 198 RDLTGIQQIQVDRGVTLNEALLRHDKWLENKGI-KNTNFAVVTWSNWDCRVMLESECRFK 257
             LTGI Q QVDR  T  + L +   W++ K +     ++++T  +WD    L  +C+  
Sbjct: 187 ISLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYSLLTDGSWDMSKFLNIQCQLS 246

Query: 258 KIRKPPYFNRWINLKIPFGEAFGGQRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLL 317
           +++ PP+  +WIN++  +G  +   R   K  +  E  G+ + GR HCGLDD+KN AR+ 
Sbjct: 247 RLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHCGLDDSKNIARIA 306

Query: 318 ALLMHRGFRLSI-----TNSLMWQTSDCPLQWKLQSPEAMTLPPQPP 356
             ++  G  L I        LM  +S  P++         T PPQ P
Sbjct: 307 VRMLQDGCELRINEKMHAGQLMSVSSSLPIEG--------TPPPQMP 345

[Close]

BLAST of Sed0024277 vs. ExPASy Swiss-Prot
Match: A6QLH5 (ERI1 exoribonuclease 3 OS=Bos taurus OX=9913 GN=ERI3 PE=2 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.9e-34
Identity = 76/189 (40.21%), Postives = 111/189 (58.73%), Query Frame = 0


Query: 136 QEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDF 195
           Q + YF+V+DFEATCDK +  HPQEIIEFP + ++  T ++E+ F  YV+P  +  L+ F
Sbjct: 141 QRYHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPF 200

Query: 196 CRDLTGIQQIQVDRGVTLNEALLRHDKWLENKGI--KNTNFAVVTWSNWDCRVMLESECR 255
           C +LTGI Q  VD   +L + L R D+W+  +G+   N     VT  +WD +VML  +C+
Sbjct: 201 CTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQ 260

Query: 256 FKKIRKPPYFNRWINLKIPFGEAFG-GQRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARL 315
           +  +    YF +WINLK  +  A G   +  L +  +   L   GR H G+DD KN A +
Sbjct: 261 YLGLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHIGRPHSGIDDCKNIANI 320

Query: 316 LALLMHRGF 322
           +  L +RGF
Sbjct: 321 MKTLAYRGF 328

[Close]

BLAST of Sed0024277 vs. ExPASy TrEMBL
Match: A0A6J1K486 (3'-5' exoribonuclease 1-like OS=Cucurbita maxima OX=3661 GN=LOC111492144 PE=4 SV=1)

HSP 1 Score: 814.3 bits (2102), Expect = 2.3e-232
Identity = 381/416 (91.59%), Postives = 389/416 (93.51%), Query Frame = 0


Query: 1   MMALERKESTQRNCEASINCLQNNGIPFSLQHGVNSVDGFQEHTDEISCHASNDIPQTNH 60
           MMALERKES QRNCEASI CLQNNGIPFSLQH  NS DGFQE TDEISCH SNDIP+TNH
Sbjct: 1   MMALERKESMQRNCEASIKCLQNNGIPFSLQHSGNSADGFQELTDEISCHGSNDIPETNH 60

Query: 61  PLVNNFIERPNEFHNKPAFQHNSGPWPAFHFDSQKVQQFQMSASECQFYSLPVENRFHYV 120
            L NNFIERPNEFHNKPA+QHNSG W AFHFDSQKVQQ QMSASECQFYSLPVENRF Y 
Sbjct: 61  LLANNFIERPNEFHNKPAYQHNSGSWQAFHFDSQKVQQCQMSASECQFYSLPVENRFQYF 120

Query: 121 PFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACF 180
           PFKMFEQNYHCD RLQEFQYFVVIDFEATCDKD+NPHPQEIIEFPSVIVSSVTGQLEACF
Sbjct: 121 PFKMFEQNYHCDRRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACF 180

Query: 181 QTYVRPTCNQHLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLENKGIKNTNFAVVTWS 240
           QTYVRPTCNQ LSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLE KGIKNTNFAVVTWS
Sbjct: 181 QTYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWS 240

Query: 241 NWDCRVMLESECRFKKIRKPPYFNRWINLKIPFGEAFGGQRCNLKEAVEMAGLAWQGRAH 300
           NWDCRVMLESECRFKKIRKPPYFNRWINLK+PF E FGG +CNLKEAVEMAGLAWQGRAH
Sbjct: 241 NWDCRVMLESECRFKKIRKPPYFNRWINLKLPFREVFGGAQCNLKEAVEMAGLAWQGRAH 300

Query: 301 CGLDDAKNTARLLALLMHRGFRLSITNSLMWQTSDCPLQWKLQSPEAMTLPPQPPMKPKP 360
           CGLDDAKNTARLLALLMHRGFR SITNSLMWQTSDCP QWK QSPEAMTLPPQPPMKPKP
Sbjct: 301 CGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWK-QSPEAMTLPPQPPMKPKP 360

Query: 361 VHLPCVQYYRHCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCQYFEWASP 417
           VH+P +QYY +CFCGVRSSRGMVRKPGPKQGS FFGCGNWTATKGARC YFEWASP
Sbjct: 361 VHVPIIQYYPYCFCGVRSSRGMVRKPGPKQGSCFFGCGNWTATKGARCHYFEWASP 415

[Close]

BLAST of Sed0024277 vs. ExPASy TrEMBL
Match: A0A6J1GI48 (3'-5' exoribonuclease 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111454139 PE=4 SV=1)

HSP 1 Score: 809.3 bits (2089), Expect = 7.5e-231
Identity = 374/416 (89.90%), Postives = 387/416 (93.03%), Query Frame = 0


Query: 1   MMALERKESTQRNCEASINCLQNNGIPFSLQHGVNSVDGFQEHTDEISCHASNDIPQTNH 60
           MMALERKES QRNCEASI CLQNNG+PFSLQH  NSVDGFQE TDEISC++ NDIP+TNH
Sbjct: 1   MMALERKESMQRNCEASIKCLQNNGMPFSLQHSGNSVDGFQERTDEISCYSRNDIPETNH 60

Query: 61  PLVNNFIERPNEFHNKPAFQHNSGPWPAFHFDSQKVQQFQMSASECQFYSLPVENRFHYV 120
           PLVNNFIERPNEFHNKPA+QHNSG WPAFHFDSQKVQQ QMSASECQFYSLPVENRFHYV
Sbjct: 61  PLVNNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQMSASECQFYSLPVENRFHYV 120

Query: 121 PFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACF 180
           PFKMFEQNYHCD RLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACF
Sbjct: 121 PFKMFEQNYHCDFRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACF 180

Query: 181 QTYVRPTCNQHLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLENKGIKNTNFAVVTWS 240
           QTYVRPTCNQ LSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLE KGIKN NFAVVTWS
Sbjct: 181 QTYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNANFAVVTWS 240

Query: 241 NWDCRVMLESECRFKKIRKPPYFNRWINLKIPFGEAFGGQRCNLKEAVEMAGLAWQGRAH 300
           NWDCRVMLESECRFKKIRKP YFNRWINLKIPF E FGGQRCNLKEAVEMAGL+WQGRAH
Sbjct: 241 NWDCRVMLESECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGRAH 300

Query: 301 CGLDDAKNTARLLALLMHRGFRLSITNSLMWQTSDCPLQWKLQSPEAMTLPPQPPMKPKP 360
           CGLDDAKNTARLLALLMHRGFR SITNSLMWQTSDCP QWK Q P  +T PPQPP+K KP
Sbjct: 301 CGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQQPPGGVTFPPQPPLKSKP 360

Query: 361 VHLPCVQYYRHCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCQYFEWASP 417
           +H+P   Y+ +C CGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARC YF+WASP
Sbjct: 361 MHIPIFHYHPYCICGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFQWASP 416

[Close]

BLAST of Sed0024277 vs. ExPASy TrEMBL
Match: A0A6J1KU41 (uncharacterized protein LOC111496425 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111496425 PE=4 SV=1)

HSP 1 Score: 808.5 bits (2087), Expect = 1.3e-230
Identity = 373/416 (89.66%), Postives = 387/416 (93.03%), Query Frame = 0


Query: 1   MMALERKESTQRNCEASINCLQNNGIPFSLQHGVNSVDGFQEHTDEISCHASNDIPQTNH 60
           MM LERKES QRNCEASI CLQNNG+PFSLQH  NSVDGFQE TDEISC++SNDIP+TNH
Sbjct: 1   MMTLERKESMQRNCEASIKCLQNNGMPFSLQHSGNSVDGFQERTDEISCYSSNDIPETNH 60

Query: 61  PLVNNFIERPNEFHNKPAFQHNSGPWPAFHFDSQKVQQFQMSASECQFYSLPVENRFHYV 120
           PLVNNFIERPNEFHNKPA+QHNSG WPAFHFDSQKVQQ QMSASECQFYSLPVENRFHYV
Sbjct: 61  PLVNNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQMSASECQFYSLPVENRFHYV 120

Query: 121 PFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACF 180
           PFKMFEQNYHCD RLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACF
Sbjct: 121 PFKMFEQNYHCDFRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACF 180

Query: 181 QTYVRPTCNQHLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLENKGIKNTNFAVVTWS 240
           QTYVRPTCNQ LSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLE KGIKN NFAVVTWS
Sbjct: 181 QTYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNANFAVVTWS 240

Query: 241 NWDCRVMLESECRFKKIRKPPYFNRWINLKIPFGEAFGGQRCNLKEAVEMAGLAWQGRAH 300
           NWDCRVMLESECRFKKIRKP YFNRWINLKIPF E FGGQRCNLKEAVEMAGL+WQGRAH
Sbjct: 241 NWDCRVMLESECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGRAH 300

Query: 301 CGLDDAKNTARLLALLMHRGFRLSITNSLMWQTSDCPLQWKLQSPEAMTLPPQPPMKPKP 360
           CGLDDAKNTARLLALLMHRGFR SITNSL+WQTSDCP QWK Q P  +T PPQPP+K KP
Sbjct: 301 CGLDDAKNTARLLALLMHRGFRFSITNSLLWQTSDCPFQWKQQPPGGVTFPPQPPLKSKP 360

Query: 361 VHLPCVQYYRHCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCQYFEWASP 417
           +H+P   Y+ +C CGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARC YF+WASP
Sbjct: 361 MHIPIFHYHPYCICGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFQWASP 416

[Close]

BLAST of Sed0024277 vs. ExPASy TrEMBL
Match: A0A6J1HFU9 (uncharacterized protein LOC111462643 OS=Cucurbita moschata OX=3662 GN=LOC111462643 PE=4 SV=1)

HSP 1 Score: 805.8 bits (2080), Expect = 8.3e-230
Identity = 378/416 (90.87%), Postives = 386/416 (92.79%), Query Frame = 0


Query: 1   MMALERKESTQRNCEASINCLQNNGIPFSLQHGVNSVDGFQEHTDEISCHASNDIPQTNH 60
           MMALERKES QRNCEASI CLQNNGIPFSLQH  NS DGFQE TDEISCH SNDIP+TNH
Sbjct: 1   MMALERKESMQRNCEASIKCLQNNGIPFSLQHSGNSADGFQELTDEISCHGSNDIPETNH 60

Query: 61  PLVNNFIERPNEFHNKPAFQHNSGPWPAFHFDSQKVQQFQMSASECQFYSLPVENRFHYV 120
            L NNFIERPNEFHNKPA+QHNSG W A HFDSQKVQQ QMSASECQFYSLPVENRF Y 
Sbjct: 61  LLANNFIERPNEFHNKPAYQHNSGSWQAVHFDSQKVQQCQMSASECQFYSLPVENRFQYF 120

Query: 121 PFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACF 180
           PFKMFEQNYHCD RLQEFQYFVVIDFEATCDKD+NPHPQEIIEFPSVIVSSVTGQLEACF
Sbjct: 121 PFKMFEQNYHCDRRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACF 180

Query: 181 QTYVRPTCNQHLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLENKGIKNTNFAVVTWS 240
           QTYVRPTCNQ LSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLE KGIKNTNFAVVTWS
Sbjct: 181 QTYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWS 240

Query: 241 NWDCRVMLESECRFKKIRKPPYFNRWINLKIPFGEAFGGQRCNLKEAVEMAGLAWQGRAH 300
           NWDCRVMLESECRFKKIRKPPYFNRWINLK+PF E FGG +CNLKEAVEMAGLAWQGRAH
Sbjct: 241 NWDCRVMLESECRFKKIRKPPYFNRWINLKLPFREVFGGAQCNLKEAVEMAGLAWQGRAH 300

Query: 301 CGLDDAKNTARLLALLMHRGFRLSITNSLMWQTSDCPLQWKLQSPEAMTLPPQPPMKPKP 360
           CGLDDAKNTARLLALLMHRGFR SITNSLMWQTSDCP QWK QSP AMTL PQPPMKPKP
Sbjct: 301 CGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWK-QSPGAMTLTPQPPMKPKP 360

Query: 361 VHLPCVQYYRHCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCQYFEWASP 417
           VH+P +QYY +CFCGVRSSRGMVRKPGPKQGS FFGCGNWTATKGARC YFEWASP
Sbjct: 361 VHVPIIQYYPYCFCGVRSSRGMVRKPGPKQGSCFFGCGNWTATKGARCHYFEWASP 415

[Close]

BLAST of Sed0024277 vs. ExPASy TrEMBL
Match: A0A1S3BCJ6 (3'-5' exoribonuclease 1-like OS=Cucumis melo OX=3656 GN=LOC103488427 PE=4 SV=1)

HSP 1 Score: 802.4 bits (2071), Expect = 9.2e-229
Identity = 370/416 (88.94%), Postives = 390/416 (93.75%), Query Frame = 0


Query: 1   MMALERKESTQRNCEASINCLQNNGIPFSLQHGVNSVDGFQEHTDEISCHASNDIPQTNH 60
           MMALERKES QRNCEASI CLQNNG+PFSLQH  NS DGFQE TDEISCHA+NDIP+TNH
Sbjct: 1   MMALERKESMQRNCEASIKCLQNNGMPFSLQHSGNSADGFQELTDEISCHANNDIPETNH 60

Query: 61  PLVNNFIERPNEFHNKPAFQHNSGPWPAFHFDSQKVQQFQMSASECQFYSLPVENRFHYV 120
           PLVNNFIERPNEFHNKPA+QHNS  WPAFHF+SQKVQQ QMSAS+CQFYSLPVENRF Y 
Sbjct: 61  PLVNNFIERPNEFHNKPAYQHNSSSWPAFHFESQKVQQCQMSASDCQFYSLPVENRFQYF 120

Query: 121 PFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACF 180
           PFKMFE NY CD+RLQEFQYFVVIDFEATCDKD+NPHPQEIIEFPSVIV+SVTG LEACF
Sbjct: 121 PFKMFEHNY-CDVRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVNSVTGHLEACF 180

Query: 181 QTYVRPTCNQHLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLENKGIKNTNFAVVTWS 240
           QTYVRPTCNQHLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLE +GIKNTNFAVVTWS
Sbjct: 181 QTYVRPTCNQHLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKRGIKNTNFAVVTWS 240

Query: 241 NWDCRVMLESECRFKKIRKPPYFNRWINLKIPFGEAFGGQRCNLKEAVEMAGLAWQGRAH 300
           NWDCRVMLESECRFKKIRKPPYFNRWINLK+PF E FGG RCNLKEAVEMAGL W+GRAH
Sbjct: 241 NWDCRVMLESECRFKKIRKPPYFNRWINLKVPFREVFGGARCNLKEAVEMAGLDWEGRAH 300

Query: 301 CGLDDAKNTARLLALLMHRGFRLSITNSLMWQTSDCPLQWKLQSPEAMTLPPQPPMKPKP 360
           CGLDDAKNTARLLAL+MH+GFR SITNSLMWQT+DCPLQWK QSPE +T PPQPPMKPKP
Sbjct: 301 CGLDDAKNTARLLALIMHKGFRFSITNSLMWQTTDCPLQWK-QSPETVTFPPQPPMKPKP 360

Query: 361 VHLPCVQYYRHCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCQYFEWASP 417
           +H+P VQY+ +CFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARC YFEWASP
Sbjct: 361 MHIPIVQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFEWASP 414

[Close]

BLAST of Sed0024277 vs. TAIR 10
Match: AT3G15140.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 101.3 bits (251), Expect = 1.9e-21
Identity = 59/204 (28.92%), Postives = 94/204 (46.08%), Query Frame = 0


Query: 136 QEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPT------CN 195
           QEF +F+VID E            EI+EFP +IV + T ++   F  +VRPT       N
Sbjct: 124 QEFNFFLVIDLEGKV---------EILEFPILIVDAKTMEVVDLFHRFVRPTKMSEQAIN 183

Query: 196 QHLSDFCRDLTGIQQIQVDRGVTLNEA-------LLRHDKWLENKGIKNTNFAVVTWSNW 255
           +++     +L G+ ++  D  +   +        L  HD W ++      + A VT  NW
Sbjct: 184 KYIEGKYGEL-GVDRVWHDTAIPFKQVVEEFEVWLAEHDLWDKDTDWGLNDAAFVTCGNW 243

Query: 256 DCRVMLESECRFKKIRKPPYFNRWINLKIPFGEAFGGQRCNLKEAVEMAGLAWQGRAHCG 315
           D +  +  +C    I  PPYF  WINLK  +   +G +   +   +   G+   G  H G
Sbjct: 244 DIKTKIPEQCVVSNINLPPYFMEWINLKDVYLNFYGREARGMVSMMRQCGIKLMGSHHLG 303

Query: 316 LDDAKNTARLLALLMHRGFRLSIT 327
           +DD KN  R++  ++  G  L +T
Sbjct: 304 IDDTKNITRVVQRMLSEGAVLKLT 317

The following BLAST results are available for this feature:

BLAST of Sed0024277 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022997162.1	4.8e-232	91.59	3'-5' exoribonuclease 1-like [Cucurbita maxima]	[more]
KAG6585276.1	4.1e-231	90.14	ERI1 exoribonuclease 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020...	[more]
XP_023537711.1	9.1e-231	89.90	3'-5' exoribonuclease 1-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022951243.1	1.5e-230	89.90	3'-5' exoribonuclease 1-like isoform X2 [Cucurbita moschata] >XP_022951244.1 3'-...	[more]
XP_023546233.1	2.0e-230	91.11	uncharacterized protein LOC111805389 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0024277 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A8K979	1.0e-38	41.71	ERI1 exoribonuclease 2 OS=Homo sapiens OX=9606 GN=ERI2 PE=2 SV=2	[more]
Q5HZL1	3.8e-38	40.48	ERI1 exoribonuclease 2 OS=Xenopus laevis OX=8355 GN=eri2 PE=2 SV=1	[more]
Q5BKS4	7.1e-37	39.34	ERI1 exoribonuclease 2 OS=Mus musculus OX=10090 GN=Eri2 PE=2 SV=1	[more]
Q8IV48	1.5e-34	36.12	3'-5' exoribonuclease 1 OS=Homo sapiens OX=9606 GN=ERI1 PE=1 SV=3	[more]
A6QLH5	1.9e-34	40.21	ERI1 exoribonuclease 3 OS=Bos taurus OX=9913 GN=ERI3 PE=2 SV=1	[more]

BLAST of Sed0024277 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K486	2.3e-232	91.59	3'-5' exoribonuclease 1-like OS=Cucurbita maxima OX=3661 GN=LOC111492144 PE=4 SV...	[more]
A0A6J1GI48	7.5e-231	89.90	3'-5' exoribonuclease 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1KU41	1.3e-230	89.66	uncharacterized protein LOC111496425 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HFU9	8.3e-230	90.87	uncharacterized protein LOC111462643 OS=Cucurbita moschata OX=3662 GN=LOC1114626...	[more]
A0A1S3BCJ6	9.2e-229	88.94	3'-5' exoribonuclease 1-like OS=Cucumis melo OX=3656 GN=LOC103488427 PE=4 SV=1	[more]

BLAST of Sed0024277 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15140.1	1.9e-21	28.92	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 4..24
None	No IPR available	PANTHER	PTHR23044	3'-5' EXONUCLEASE ERI1-RELATED	coord: 1..415
None	No IPR available	PANTHER	PTHR23044:SF64	ERI1 EXORIBONUCLEASE 2-LIKE	coord: 1..415
None	No IPR available	CDD	cd06133	ERI-1_3'hExo_like	coord: 141..317 e-value: 7.10029E-68 score: 211.31
IPR013520	Exonuclease, RNase T/DNA polymerase III	SMART	SM00479	exoiiiendus	coord: 140..322 e-value: 2.1E-19 score: 80.5
IPR013520	Exonuclease, RNase T/DNA polymerase III	PFAM	PF00929	RNase_T	coord: 142..313 e-value: 2.4E-26 score: 93.2
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 130..346 e-value: 2.0E-75 score: 255.1
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 138..327

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0024277.1	Sed0024277.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000467	exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
molecular_function	GO:0000175	3'-5'-exoribonuclease activity
molecular_function	GO:0003676	nucleic acid binding