Sed0023461 (gene) Chayote v1

Overview
NameSed0023461
Typegene
OrganismSechium edule (Chayote v1)
Descriptionnuclear speckle splicing regulatory protein 1-like
LocationLG11: 27750930 .. 27756890 (+)
RNA-Seq ExpressionSed0023461
SyntenySed0023461
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCAAAATCAACCCTTTATGGTAACCTTCCATTATCCTAGTGAAATCCATGCTCCAAGATACCTTAAATCATAGTATGCCGTATTTTGGGTTATTGTAGAAATTCACCAATTTCGTCCCTCTTCTTCCATTTTCAGAATCAGAGAGCACTGCCGGGCCGCTCCACCATCGCGCTGTAGCCTCTTCGATCTTCTTCATATATCGGATCTCAGGTATTGTTCGTAATTTCATTCTTTTTCGCTCAACCCTAGTTCTATTATTACGTTTCGAATCGAATCGAATCCAATGGGCATTGGCAGTACAATTGATTTCTGGTTAAATTCTTTCGAGCTTGCTTGTGTTATGATTTTGTGTTCTTCAGCCCAGTTCTGGTTTTGAACTTCTCTAGCTCTGAATCGCTGACATCTTATCGATTTGATTTTTTCGTGTAATCTTTTTCTGTTCTTTTGTTTTTGCACTTGTCCCGCAACCCTATATTTCGATTTTATTTTCCTTTCTATTGATTTCATCATTGCAAGTTCAGTCATAATCTTTTTCTCTTCTAGAATGTTTTTTTTTCCCACCCATGTTGTCCTAGACTCGAATTCGTATCAAACTGCTCTTAAGTTTTAACCAGACGGATAGGAACAAAGGGTTGGAATAGAATTTGTTCTGAAAACTTGAATAACGAAAAAACACAGTGAAATGTTCCAAAGCAACTTATCCAGATTTTGTGCTATTTTCTCACTTGTTTTTTTTTTTGAAACAAGGATAACACGCCTGTCCCTAGGCTAGATACCAAGAGACATCGAAGGAGTAATGTCACAATAATAAATAGGGGTGAAATAAAAAATAAAAAACGACTAAACTGAATCAATCCATTGGTTAGATCGGTTTTTAAGAAGCATATTGGATCTATTAGTTTGAAATTATAGAAAATCGAGTTTGACTGGTTCGATTCAGTTTTATATTGAGAAACCAATAAACCTGAATCCACTTACTGAGGATCTTTTATCACTATTACCTCCTCCAACTTTGTCATCCACAGTTGATCAAATCGTGAAATGGAACGTGTATCGAAATTTAAATTTAATGTATCGTGTATCATAAGTTACAGACTTATAAATAATTATTAATTTTTATATTTATATACATATAAATATAAATAATCAACTGACCTAACTTCAAAATATATAGATATAATTTTTTTATTTTTTTTGAAATCACATATAGAATGTTTAATTCTACATTCTATTTAAAATTTTCATAAAACATGAATATCAATATATTAACGGTTGATATTTTTATTTTAAAATAAAAATTGACATCCTTTTCGTTAATTATCATGAATGGAAAAGACAACTCATTAAATTTTCGTAAATTGAATAGGAACAGATATTTGAATTTTACTAAAAAAATAAACAAAAAGCCCCAACTTCTCAGCACAGCCGCCCCTTTCTCACACATCTCTTTCTCTGCTGCTCGTTTTATTTTGTACAAAATCTCTGTATTCAAAGAACGAATGAAGAACTATTTCATCTGCTATTCATCTTCGACGTCTCTTTGATAGTAAAAAAGGTATGATTTTTTTTTGAATCGTTCCGATATGCAGGTGAATCGTTTCTTTTTAACTCTGAAAATGTCCGATTCGGGCGAAATGCGATTCAAAATTACGATGTGAATCGATTTCTTCACGATTCGTTTCAAATCGAAAAACACACGTTTTTGATAACCTTGGTCACAGCTGAATCTCGAACCTAGAACCTTGAGGGGAGCATACCCCCTCGAAACTCAGGTCTTCAACCACTGTGCCATCCGTTGGGGACGTTCTTAGCTACGCAGGTGAATCGTTTCTTTTTAACTCTGAAAACGTCTGATTCGGGCGAAATGCGATTCAAAATTACCATGTGAATCGATTTCTTGAATCGCACATTTTTTATAACCTCGGTCAACAGCTGAGTCTCGAACCTAGAACCTTGAGGGGAACATAATCCCTCGAAGCCCAGATCTTCAACCACTACTGTGCCATCCATTGGGGACTTTCTTAATTACTCTATTTATAACTTCTCTACTAAAAAAAACTACGTCATTAAAAGCTATTATGTCGCCGATATTCTAATCATATCTCTAATATTCCTTGATTCCTAACACTCTTCTTTACTACATCTATGGCTCACTTGGAATGATGTCAGTTATGTGTTTTACATTTTTAGTTATTTTTGTCTGTATAATCTTTCCTTGAAGGAAATTGGTGATTTTTTTGTCTCGAAGAGGCGGCCTTGTTGGTTGAGGCTTGGGGCTTTCAAGACATGCATCTTTGGAAGTCTCTGTTTCGAGTCCCACGAATGAGCTTAGTTGTAAAACTCCATGTTATCTTTTGGGTCTGGGCCTTGGAATGGGCGTGGGTGCCCCCGAGTATAAGGGAATGAAGCTCTGATTTCCCGGTTTTCAGAAACAAAAAATATGGAAGATTTTTTTGTATGCTTTATGCATCAATAAGTTACATTAAGATTTTTCACAGGAACAGCTAGAAGACAGTAAAAATGAGCAAGTATGGATTGCAGCTAAGGGTTAAGTCATCACAACAGAAAAAACCTACAAGACCGCCCCTTCCTGCTCCTCTTGGATTTCAAGATGACGATGACGATGATGTCGAGAGAGAGATATCCCGCCATGCTTCCAAGAATAAGGCACTTAAGGATGTAAGTTGGCATGTGTATGGCCATTTATTTTTCTCTGTTTGTTAGTGCTTTTCCTTTACCATTGACTATTTATTGAGCAAAGATAATGTCGTTAACAAGAATCTTGAGGTTGTATGCTAGCCTTATTTTATTTTCCCTTTGAAAAATCAATTTAGATTGAGGAGCAACACAAGAAAGCACTAGAAGAGGATCCGTCTGTTTTTGACTATGATGGAGTTTATGATGAAATGAAAGAAAAGGCTGTTCAACCTCGAGCAAATGACCGTGAAGAGAGAAAGGTATGTTCATTTTTTGTCCCAAAATTGCTTGGGTCCCTTCTTACCCACTTACCCTAGGTTTTATTTTATTTTTTGAGAGATCTCAAGGTTTTAATTAATCAATAGTCCTAAATTTCAATGTAATTTTTAACTTCTCCCAAAAGGGTTTTAAGATTTGGCAGTTGGAGCTGTGAGCTCTACGATTTTGACCATCGGCTGGGTCTTTGTATGATACCTTTTATGCCAAGTTTGAAACTAAAAGTTGTTACATGGTTGGATAGCTTAGTAGTTAGTTCTTCGATGTATGTTTAGTTAAGCTGGAATAAAAAGTACTGTAGCTTCTGTTGCTGTTCATCTGGAGTTTTAGACTTTAGTTCAGATATCGAAACACAAAATGTCTGCTAGAAAACTGATTATTACTCTATTTACCATGCTGGGGTAATTGATGCAGCAGCTTAATTCAAAATAAATGAACGTACGTACCACAACTTTGGTTGCTAATAAATTTTAACTAGGATTTATAATCTAATTTGAGTAAGGTTTTTAAGAAAACTAATGAACTTCTACTCAACTTGTTATTCCTAATAAAAGAAAACCTAATGTCTCCAAGGGGTGGCGCAGTGGTTGAAGATTTGGGCTTTGAGGGTATGCTCCTCTCAAAGTCTCGAGTTCGAGACTCACTTGTGACATTACTCATTCGATGTCTTTGGTGCATGGCCTAGGGACGGGCGTGGTTATCCTTGTTTAAAAAAAGAAAACCTAATACTTAATGAAACATAAAAATGAAGTTGACAGAACTCAATCAATTTTATTTATGTTTCAAGCACGAAGCCAGACTCTCCTTCACACGCACGAAGCAAATATTCAGAATGAAAAAAAGAACAGCAAACCAATAACATAAATATTTGGCCCCGTTTGATAACCATTTGGTTTTTCGTTTTTTGTTTATGAAATTTAAATGCTTCATCTTTCCTACAATGTATCCATAATTCTTTAAAAAAGTAGGGGAAGACTAACCAAATTTCAAAAACAAAAACAAGCTTTTGTGAAACTGCTTTTTTTTGTTTACAAATTTTGGTTTTGTTTATTAAAAGATAGGTAAGATGTAGATATGCAAATAAGGAAAAAGGTATAGTGAGGTAGTTGTTGTAGGCTTAAATTTCATAAGCAAAAAACGAAAAACAAAATGGTTATCAAACGGGCCTTAAATACTCGTTCACACACGATCCTCCTCTGCCAATGGTTTTGGGTCATGTGGAATACTTTTATAACCAACCTTCCAACTCATGTCTTTGTTTTCCTTCGGGAATAAACCTCCAAGGGTGGAGGTGTATGAGAAGTCGTATAGAAAACCGTATGCATGTACAAAAATACATTATCACCTTAATCTAATTCTGCCACTAGTGAAAACACTTATTTGACTCACTGCTTTTCTGTTGCAGCCAAAGTATATTCAAAATTTACTCAAGAAGGCAAAAGAGCGAGAGAGAGAACAGGAGATCATATATGAAAGAAAACTGGCCAAGGACAGAAGCAAAGAGGATCATCTCTATGTTGATAAGGACAAATTTGTCACTGGTGCCTACAAAAGGAAACTTGCAGAACAAGCAAAATGGATGGAGGAAGAGCGTCTTCGACAGCTTCGGGAGGAGAAAGAGGATGTATGTAAAACAAATTCTCTGTCTTCTTCACTTATATAAATTTATAAATTCTTATGGTTTGTGAAATACTTTCTACAGTTAAAACAAGAAAGTGGGAGTGTTAATTTATCCTGATTTTCGTGACTGTTAGTTTGCTGATGTTCACATGTAATCTTGTTTGTGGCATTTCTTTGGTACTGTAACATCCCCATGACCAATTCTAGGCCATAGAGGATATTTACTGACTGGGAACAAGTACCACCCTTGCATCCTAGCTTTGCATATCCCATATTTTATATTTTATATTGTACGCTCAAGTAAGCACACTCTATAGTGGAGCGAAACTTCAATTTCTCGGTTTAAAAAAAAAGTATGCACAATCCAACTGGTTTCTATTGCATCCTCTAGGATTTGGGCTTCTATCATCCCCATTAAGAAAGTAAAACCAGGTTATTTTTCTGGTAGTGCATCCATGCTGCTAAAAATAATTGTATTGCAAGTTTTGGGAGGGGACAATTTTGTCTCTTAGATGAAAAATATTTTCTCTTCATATTATACAGAATGATGTTTTTGTGTTACATATAGTACTTAATGATGCAATGCACGTCTCCATCATCGTCTTGTTGGGTTATCTTTGGAATAGCTTTATGCTTTCTTTAATGTATGTTTTCCATAGACTACCACAAAGCTGATTGTTCTTTTTCCACCTATTTGAAGGTTACCAAGAAAAGCGACATTACCGACTTTTACTTCAACCTTCAAAAGAATATTGCCTACGGTGCTGCAGATGCAGTCAAGCCGAGGGAACCTTCAAAGCTTCAATCAGAGAAACCGGAGAAGCAGACCGATGTTTTGAAGCCGACCGACTTTCAGAAATTGGAAAAGCATGAAGAGAGTGCTTCTGATACCTCCGATAACCTTCCGTCATCGAAGTACTCCGATTTACCTTCCCAGTCAGCGAAGACGATAGAAGATCATCCTCATCTTGCAGAAAAAGACCATTCAGTTTCAAACAAAACAACACCGCCTGATGCAGGAGATACTAGCCCCCTTTCATTAAGCGATAAAACTGCGGTTGAGGAACAACCCAAGCTCGACGAAGGCGAACAACAACCAAAACGCGATCATCATAAAAGAAGTGAAGATGCTGTAACTGCAGCAAAAGCACGCTTTTTGGCTCGCAAAAGAGCAAAGGAGGTGTAAAATACTTGTTGAACCAAATTTAAACTGAGGACAACTATGTGCATGATATTGTTGTCTCGAGGATAGATGATAATTACGTTTTTAATGGTGAAAGTTCTGTCTTTGTTTTTGTCTTCCATGTGAGATTCCTTGTGTTGATGAATAGGAGAGCTTCAGAAGAAACTCGAACAACTAGCTGCTC

mRNA sequence

ATCAAAATCAACCCTTTATGGTAACCTTCCATTATCCTAGTGAAATCCATGCTCCAAGATACCTTAAATCATAGTATGCCGTATTTTGGGTTATTGTAGAAATTCACCAATTTCGTCCCTCTTCTTCCATTTTCAGAATCAGAGAGCACTGCCGGGCCGCTCCACCATCGCGCTGTAGCCTCTTCGATCTTCTTCATATATCGGATCTCAGGAACAGCTAGAAGACAGTAAAAATGAGCAAGTATGGATTGCAGCTAAGGGTTAAGTCATCACAACAGAAAAAACCTACAAGACCGCCCCTTCCTGCTCCTCTTGGATTTCAAGATGACGATGACGATGATGTCGAGAGAGAGATATCCCGCCATGCTTCCAAGAATAAGGCACTTAAGGATATTGAGGAGCAACACAAGAAAGCACTAGAAGAGGATCCGTCTGTTTTTGACTATGATGGAGTTTATGATGAAATGAAAGAAAAGGCTGTTCAACCTCGAGCAAATGACCGTGAAGAGAGAAAGCCAAAGTATATTCAAAATTTACTCAAGAAGGCAAAAGAGCGAGAGAGAGAACAGGAGATCATATATGAAAGAAAACTGGCCAAGGACAGAAGCAAAGAGGATCATCTCTATGTTGATAAGGACAAATTTGTCACTGGTGCCTACAAAAGGAAACTTGCAGAACAAGCAAAATGGATGGAGGAAGAGCGTCTTCGACAGCTTCGGGAGGAGAAAGAGGATGTTACCAAGAAAAGCGACATTACCGACTTTTACTTCAACCTTCAAAAGAATATTGCCTACGGTGCTGCAGATGCAGTCAAGCCGAGGGAACCTTCAAAGCTTCAATCAGAGAAACCGGAGAAGCAGACCGATGTTTTGAAGCCGACCGACTTTCAGAAATTGGAAAAGCATGAAGAGAGTGCTTCTGATACCTCCGATAACCTTCCGTCATCGAAGTACTCCGATTTACCTTCCCAGTCAGCGAAGACGATAGAAGATCATCCTCATCTTGCAGAAAAAGACCATTCAGTTTCAAACAAAACAACACCGCCTGATGCAGGAGATACTAGCCCCCTTTCATTAAGCGATAAAACTGCGGTTGAGGAACAACCCAAGCTCGACGAAGGCGAACAACAACCAAAACGCGATCATCATAAAAGAAGTGAAGATGCTGTAACTGCAGCAAAAGCACGCTTTTTGGCTCGCAAAAGAGCAAAGGAGGTGTAAAATACTTGTTGAACCAAATTTAAACTGAGGACAACTATGTGCATGATATTGTTGTCTCGAGGATAGATGATAATTACGTTTTTAATGGTGAAAGTTCTGTCTTTGTTTTTGTCTTCCATGTGAGATTCCTTGTGTTGATGAATAGGAGAGCTTCAGAAGAAACTCGAACAACTAGCTGCTC

Coding sequence (CDS)

ATGAGCAAGTATGGATTGCAGCTAAGGGTTAAGTCATCACAACAGAAAAAACCTACAAGACCGCCCCTTCCTGCTCCTCTTGGATTTCAAGATGACGATGACGATGATGTCGAGAGAGAGATATCCCGCCATGCTTCCAAGAATAAGGCACTTAAGGATATTGAGGAGCAACACAAGAAAGCACTAGAAGAGGATCCGTCTGTTTTTGACTATGATGGAGTTTATGATGAAATGAAAGAAAAGGCTGTTCAACCTCGAGCAAATGACCGTGAAGAGAGAAAGCCAAAGTATATTCAAAATTTACTCAAGAAGGCAAAAGAGCGAGAGAGAGAACAGGAGATCATATATGAAAGAAAACTGGCCAAGGACAGAAGCAAAGAGGATCATCTCTATGTTGATAAGGACAAATTTGTCACTGGTGCCTACAAAAGGAAACTTGCAGAACAAGCAAAATGGATGGAGGAAGAGCGTCTTCGACAGCTTCGGGAGGAGAAAGAGGATGTTACCAAGAAAAGCGACATTACCGACTTTTACTTCAACCTTCAAAAGAATATTGCCTACGGTGCTGCAGATGCAGTCAAGCCGAGGGAACCTTCAAAGCTTCAATCAGAGAAACCGGAGAAGCAGACCGATGTTTTGAAGCCGACCGACTTTCAGAAATTGGAAAAGCATGAAGAGAGTGCTTCTGATACCTCCGATAACCTTCCGTCATCGAAGTACTCCGATTTACCTTCCCAGTCAGCGAAGACGATAGAAGATCATCCTCATCTTGCAGAAAAAGACCATTCAGTTTCAAACAAAACAACACCGCCTGATGCAGGAGATACTAGCCCCCTTTCATTAAGCGATAAAACTGCGGTTGAGGAACAACCCAAGCTCGACGAAGGCGAACAACAACCAAAACGCGATCATCATAAAAGAAGTGAAGATGCTGTAACTGCAGCAAAAGCACGCTTTTTGGCTCGCAAAAGAGCAAAGGAGGTGTAA

Protein sequence

MSKYGLQLRVKSSQQKKPTRPPLPAPLGFQDDDDDDVEREISRHASKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKEKAVQPRANDREERKPKYIQNLLKKAKEREREQEIIYERKLAKDRSKEDHLYVDKDKFVTGAYKRKLAEQAKWMEEERLRQLREEKEDVTKKSDITDFYFNLQKNIAYGAADAVKPREPSKLQSEKPEKQTDVLKPTDFQKLEKHEESASDTSDNLPSSKYSDLPSQSAKTIEDHPHLAEKDHSVSNKTTPPDAGDTSPLSLSDKTAVEEQPKLDEGEQQPKRDHHKRSEDAVTAAKARFLARKRAKEV
Homology
BLAST of Sed0023461 vs. NCBI nr
Match: XP_022142663.1 (nuclear speckle splicing regulatory protein 1-like [Momordica charantia])

HSP 1 Score: 466.8 bits (1200), Expect = 1.5e-127
Identity = 265/330 (80.30%), Postives = 291/330 (88.18%), Query Frame = 0

Query: 1   MSKYGLQLRVKSSQQKKPTRPPLPAPLGFQDDDDDDVEREISRHASKNKALKDIEEQHKK 60
           MSKYGLQLRVK SQQK+PTRPPLP  LGFQDDDD+DVEREISR A+KNKALKDIEEQHKK
Sbjct: 1   MSKYGLQLRVKPSQQKQPTRPPLPPSLGFQDDDDNDVEREISRQATKNKALKDIEEQHKK 60

Query: 61  ALEEDPSVFDYDGVYDEMKEKAVQPRANDREERKPKYIQNLLKKAKEREREQEIIYERKL 120
           ALEEDPSVFDYDGVYDEMKE+ VQPRA+DREERKPKYIQNL+KKAKEREREQEIIYERKL
Sbjct: 61  ALEEDPSVFDYDGVYDEMKERMVQPRAHDREERKPKYIQNLMKKAKEREREQEIIYERKL 120

Query: 121 AKDRSKEDHLYVDKDKFVTGAYKRKLAEQAKWMEEERLRQLREEKEDVTKKSDITDFYFN 180
           AK+RSKEDHLY  KDKFVTGAYK+KLAEQAKWMEEERLRQLREEKEDVTKKSDI+DFYFN
Sbjct: 121 AKERSKEDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDFYFN 180

Query: 181 LQKNIAYGAADAVKPREPSK-LQSEKPEKQTDVLKPTDFQKLEKHEESA-SDTSDNLPSS 240
           LQKNIA+GA +AVK REP K LQSE+ EK ++V      ++LEKHEESA +DTS+N  SS
Sbjct: 181 LQKNIAFGAENAVKSREPPKQLQSEEQEKHSEV------RELEKHEESANADTSNNSQSS 240

Query: 241 KYSDLPSQSAKTIEDHPHLAEKDHSVSNKTTPPDAGDTSPLSLSDKTAVEEQPKLDEGEQ 300
           K S+LPSQSAK +E+HP   E+D  VSNKTTP    D SP SL DKT+V+EQPK  +GEQ
Sbjct: 241 KQSNLPSQSAKMVEEHP---EEDFLVSNKTTP---SDVSPPSLHDKTSVQEQPKHGQGEQ 300

Query: 301 QPKRDHHKRSEDAVTAAKARFLARKRAKEV 329
           QPKRDHHKRSEDAVTAAK RFLARKRAK+V
Sbjct: 301 QPKRDHHKRSEDAVTAAKERFLARKRAKDV 318

BLAST of Sed0023461 vs. NCBI nr
Match: XP_038877232.1 (nuclear speckle splicing regulatory protein 1-like [Benincasa hispida] >XP_038877234.1 nuclear speckle splicing regulatory protein 1-like [Benincasa hispida] >XP_038877235.1 nuclear speckle splicing regulatory protein 1-like [Benincasa hispida])

HSP 1 Score: 465.3 bits (1196), Expect = 4.3e-127
Identity = 262/329 (79.64%), Postives = 288/329 (87.54%), Query Frame = 0

Query: 1   MSKYGLQLRVKSSQQKKPTRPPLPAPLGFQDDDDDDVEREISRHASKNKALKDIEEQHKK 60
           MSKYGLQLRVK SQQK+PTRPPLPAPLGFQDDDDDDVEREISR ASKNKALKDIE+QH+K
Sbjct: 1   MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEDQHRK 60

Query: 61  ALEEDPSVFDYDGVYDEMKEKAVQPRANDREERKPKYIQNLLKKAKEREREQEIIYERKL 120
           ALEEDPSVFDYDGVYD+MKEKAVQPRA DREERKPKYIQNL+KKA+EREREQEIIYERKL
Sbjct: 61  ALEEDPSVFDYDGVYDQMKEKAVQPRAYDREERKPKYIQNLMKKAQEREREQEIIYERKL 120

Query: 121 AKDRSKEDHLYVDKDKFVTGAYKRKLAEQAKWMEEERLRQLREEKEDVTKKSDITDFYFN 180
           AK+RSK+DHLY  KDKFVT AYK+KLAEQAKWMEEERLRQLREEKEDVTKKSDITDFYFN
Sbjct: 121 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDITDFYFN 180

Query: 181 LQKNIAYGAADAVKPRE-PSKLQSEKPEKQTDVLKPTDFQKLEKHEESA-SDTSDNLPSS 240
           LQKNIAYGA +A++PRE P+KL SEK EKQT+V         EKHEE A +DT ++  S 
Sbjct: 181 LQKNIAYGARNAIEPREPPNKLLSEKQEKQTEV------HISEKHEEGANADTFNDHQSL 240

Query: 241 KYSDLPSQSAKTIEDHPHLAEKDHSVSNKTTPPDAGDTSPLSLSDKTAVEEQPKLDEGEQ 300
           KYS+LPSQSAKT E+HP L E+  SVSNKTTP D    SP ++ +KT VEEQPK ++GEQ
Sbjct: 241 KYSNLPSQSAKTREEHPRL-EEHLSVSNKTTPSDVRGNSPRTICNKTPVEEQPKHEQGEQ 300

Query: 301 QPKRDHHKRSEDAVTAAKARFLARKRAKE 328
           QPKRDHHKR+EDAV AAK RFLARKRAKE
Sbjct: 301 QPKRDHHKRNEDAVAAAKERFLARKRAKE 322

BLAST of Sed0023461 vs. NCBI nr
Match: XP_022927406.1 (nuclear speckle splicing regulatory protein 1-like [Cucurbita moschata] >XP_022927407.1 nuclear speckle splicing regulatory protein 1-like [Cucurbita moschata])

HSP 1 Score: 451.4 bits (1160), Expect = 6.5e-123
Identity = 258/330 (78.18%), Postives = 279/330 (84.55%), Query Frame = 0

Query: 1   MSKYGLQLRVKSSQQKKPTRPPLPAPLGFQDDDDDDVEREISRHASKNKALKDIEEQHKK 60
           MSKYGLQLRVK SQQK+PTRPPLPAPLGFQDDDDDDVEREISR ASKNKALKDIEEQHKK
Sbjct: 1   MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK 60

Query: 61  ALEEDPSVFDYDGVYDEMKEKAVQPRANDREERKPKYIQNLLKKAKEREREQEIIYERKL 120
           AL EDPSVFDYDGVYDEMKEKAV PRA DREERKPKYIQNL+KKAKEREREQE+IYERKL
Sbjct: 61  ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL 120

Query: 121 AKDRSKEDHLYVDKDKFVTGAYKRKLAEQAKWMEEERLRQLREEKEDVTKKSDITDFYFN 180
           AK+RSK+DHLY  KDKFVT AYK+KLAEQAKWMEEERLRQLREEK+DVTKKSDI+DFYFN
Sbjct: 121 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN 180

Query: 181 LQKNIAYGAADAVKPRE-PSKLQSEKPEKQTDVLKPTDFQKLEKHEESA-SDTSDNLPSS 240
           LQKNIAYGA +AV+PRE P KLQSE         K  + QKL+KHEESA +D  ++  S 
Sbjct: 181 LQKNIAYGAGNAVEPREPPQKLQSE---------KQAEVQKLKKHEESANADIVNDHQSP 240

Query: 241 KYSDLPSQSAKTIEDHPHLAEKDHSVSNKTTPPDAGDTSPLSLSDKTAVEEQPKLDEGEQ 300
           KY   PSQSAKTIE   HL E+  S SNKTTP D   TSP  L ++T VE+QP+ D+GEQ
Sbjct: 241 KYPSSPSQSAKTIEQDRHL-EEHLSNSNKTTPSDVRGTSPPPLHNRTPVEKQPEHDQGEQ 300

Query: 301 QPKRDHHKRSEDAVTAAKARFLARKRAKEV 329
           QPKRDHHKRSEDAV AAK RFLARKR KEV
Sbjct: 301 QPKRDHHKRSEDAVAAAKERFLARKRTKEV 320

BLAST of Sed0023461 vs. NCBI nr
Match: XP_023520694.1 (nuclear speckle splicing regulatory protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 451.1 bits (1159), Expect = 8.4e-123
Identity = 258/330 (78.18%), Postives = 278/330 (84.24%), Query Frame = 0

Query: 1   MSKYGLQLRVKSSQQKKPTRPPLPAPLGFQDDDDDDVEREISRHASKNKALKDIEEQHKK 60
           MSKYGLQLRVK SQQK+PTRPPLPAPLGFQDDDDDDVEREISR ASKNKALKDIEEQHKK
Sbjct: 1   MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK 60

Query: 61  ALEEDPSVFDYDGVYDEMKEKAVQPRANDREERKPKYIQNLLKKAKEREREQEIIYERKL 120
           AL EDPSVFDYDGVYDEMKEKAV PRA DREERKPKYIQNL+KKAKEREREQE+IYERKL
Sbjct: 61  ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL 120

Query: 121 AKDRSKEDHLYVDKDKFVTGAYKRKLAEQAKWMEEERLRQLREEKEDVTKKSDITDFYFN 180
           AK+RSK+DHLY  KDKFVT AYK+KLAEQAKWMEEERLRQLREEK+DVTKKSDI+DFYFN
Sbjct: 121 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN 180

Query: 181 LQKNIAYGAADAVKPRE-PSKLQSEKPEKQTDVLKPTDFQKLEKHEESA-SDTSDNLPSS 240
           LQKNIAYGA +AV+PRE P KLQSE         K  + QKL+KHEES  +D  ++  S 
Sbjct: 181 LQKNIAYGAGNAVEPREPPQKLQSE---------KQAEVQKLKKHEESVNADIVNDHQSP 240

Query: 241 KYSDLPSQSAKTIEDHPHLAEKDHSVSNKTTPPDAGDTSPLSLSDKTAVEEQPKLDEGEQ 300
           KY   PSQSAKTIE   HL E+  S SNKTTP D   TSP  L +KT VE+QP+ D+GEQ
Sbjct: 241 KYPSSPSQSAKTIEQDRHL-EEHLSNSNKTTPSDVRGTSPPPLHNKTPVEKQPEHDQGEQ 300

Query: 301 QPKRDHHKRSEDAVTAAKARFLARKRAKEV 329
           QPKRDHHKRSEDAV AAK RFLARKR KEV
Sbjct: 301 QPKRDHHKRSEDAVAAAKERFLARKRTKEV 320

BLAST of Sed0023461 vs. NCBI nr
Match: XP_022973152.1 (nuclear speckle splicing regulatory protein 1-like [Cucurbita maxima] >XP_022973153.1 nuclear speckle splicing regulatory protein 1-like [Cucurbita maxima] >XP_022973154.1 nuclear speckle splicing regulatory protein 1-like [Cucurbita maxima])

HSP 1 Score: 450.7 bits (1158), Expect = 1.1e-122
Identity = 258/330 (78.18%), Postives = 278/330 (84.24%), Query Frame = 0

Query: 1   MSKYGLQLRVKSSQQKKPTRPPLPAPLGFQDDDDDDVEREISRHASKNKALKDIEEQHKK 60
           MSKYGLQLRVK SQQK+PTRPPLPAPLGFQDDDDDDVEREISR ASKNKALKDIEEQHKK
Sbjct: 1   MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK 60

Query: 61  ALEEDPSVFDYDGVYDEMKEKAVQPRANDREERKPKYIQNLLKKAKEREREQEIIYERKL 120
           AL EDPSVFDYDGVYDEMKEKAV PRA DREERKPKYIQNL+KKAKEREREQE+IYERKL
Sbjct: 61  ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL 120

Query: 121 AKDRSKEDHLYVDKDKFVTGAYKRKLAEQAKWMEEERLRQLREEKEDVTKKSDITDFYFN 180
           AK+RSK+DHLY  KDKFVT AYK+KLAEQAKWMEEERLRQLREEK+DVTKKSDI+DFYFN
Sbjct: 121 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN 180

Query: 181 LQKNIAYGAADAVKPRE-PSKLQSEKPEKQTDVLKPTDFQKLEKHEESA-SDTSDNLPSS 240
           LQKNIAYGA +AV+PRE P KLQSE         K  D QK++KH ESA +D  ++  S 
Sbjct: 181 LQKNIAYGAGNAVEPREPPQKLQSE---------KQADVQKMKKHGESANADIVNDHQSP 240

Query: 241 KYSDLPSQSAKTIEDHPHLAEKDHSVSNKTTPPDAGDTSPLSLSDKTAVEEQPKLDEGEQ 300
           KY   PSQSAKTIE   HL E+  S SNKTTP D   TSP  L +KT VE+QP+ D+GEQ
Sbjct: 241 KYPSSPSQSAKTIEQDRHL-EEHLSNSNKTTPSDVRGTSPPPLHNKTPVEKQPEHDQGEQ 300

Query: 301 QPKRDHHKRSEDAVTAAKARFLARKRAKEV 329
           QPKRDHHKRSEDAV AAK RFLARKR KEV
Sbjct: 301 QPKRDHHKRSEDAVAAAKERFLARKRTKEV 320

BLAST of Sed0023461 vs. ExPASy Swiss-Prot
Match: Q2KIC0 (Nuclear speckle splicing regulatory protein 1 OS=Bos taurus OX=9913 GN=NSRP1 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 4.6e-23
Identity = 77/184 (41.85%), Postives = 114/184 (61.96%), Query Frame = 0

Query: 3   KYGLQLRVKSSQQKKPTRPPLPAPLGFQDDDDDD---VEREISRHASKNKALKDIEEQHK 62
           +YGL L  K +QQ  P     P+  G   DDDDD   V   + R A+K +A+K  + + +
Sbjct: 7   QYGLIL-PKKAQQLHPVLQK-PSVFGNDSDDDDDETSVSESLQREAAKKQAMKQTKLEIQ 66

Query: 63  KALEEDPSVFDYDGVYDEMKEKAVQ--PRANDREERKPKYIQNLLKKAKEREREQEIIYE 122
           KAL ED +V++YD +YDEM++K  +  P+    ++RKPKYI NLLK  + R++EQE   E
Sbjct: 67  KALAEDSTVYEYDSIYDEMQKKKEESNPKLLLGKDRKPKYIHNLLKAVEIRKKEQEKRME 126

Query: 123 RKLAKDRSKEDHLYVDKDKFVTGAYKRKLAEQAKWMEEERLRQLREEKEDVTKKSDITDF 182
           +K+ ++R  E   + DK+ FVT AYK+KL E+A+  E ER     E + DVTK+ D++ F
Sbjct: 127 KKIQREREMEKGEFDDKEAFVTSAYKKKLQERAEEEERERRAAALEARLDVTKQRDLSGF 186

BLAST of Sed0023461 vs. ExPASy Swiss-Prot
Match: Q9H0G5 (Nuclear speckle splicing regulatory protein 1 OS=Homo sapiens OX=9606 GN=NSRP1 PE=1 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 6.9e-19
Identity = 104/341 (30.50%), Postives = 161/341 (47.21%), Query Frame = 0

Query: 3   KYGLQLRVKSSQQKKPTRPPLPAPLGFQDDDDDDVEREIS----RHASKNKALKDIEEQH 62
           +YGL L  K+ Q      P L  P  F +D DDD E  +S    R A+K +A+K  + + 
Sbjct: 7   QYGLILPKKTQQ----LHPVLQKPSVFGNDSDDDDETSVSESLQREAAKKQAMKQTKLEI 66

Query: 63  KKALEEDPSVFDYDGVYDEMKEKAVQ--PRANDREERKPKYIQNLLKKAKEREREQEIIY 122
           +KAL ED +V++YD +YDEM++K  +  P+    ++RKPKYI NLLK  + R++EQE   
Sbjct: 67  QKALAEDATVYEYDSIYDEMQKKKEENNPKLLLGKDRKPKYIHNLLKAVEIRKKEQEKRM 126

Query: 123 ERKLAKDRSKEDHLYVDKDKFVTGAYKRKLAEQAKWMEEERLRQLREEKEDVTKKSDITD 182
           E+K+ ++R  E   + DK+ FVT AYK+KL E+A+  E E+     E   DVTK+ D++ 
Sbjct: 127 EKKIQREREMEKGEFDDKEAFVTSAYKKKLQERAEEEEREKRAAALEACLDVTKQKDLSG 186

Query: 183 FYFNLQKNIAYGAADAVK---------------------PREPSKLQSEKPEKQTDVL-- 242
           FY +L  N A G  +  K                         +++  EK   QTDV   
Sbjct: 187 FYRHL-LNQAVGEEEVPKCSFREARSGIKEEKSRGFSNEVSSKNRIPQEKCILQTDVKVE 246

Query: 243 ----KPTDFQKLEKHEESASDTSDNLPSSKYSDLPSQSAKTIEDHPHLAEKDHSVSNKTT 302
                 +DF      ++   +T  N    K  + P        D  H   ++HS S   +
Sbjct: 247 ENPDADSDFDAKSSADDEIEETRVNCRREKVIETPE------NDFKHHRSQNHSRS--PS 306

Query: 303 PPDAGDTSPLSLSDKTAVEEQPKLDEGEQQPKRDHHKRSED 311
                 T   +   +T+   + + D+ +Q+  RD      D
Sbjct: 307 EERGHSTRHHTKGSRTSRGHEKREDQHQQKQSRDQENHYTD 334

BLAST of Sed0023461 vs. ExPASy Swiss-Prot
Match: Q5NCR9 (Nuclear speckle splicing regulatory protein 1 OS=Mus musculus OX=10090 GN=Nsrp1 PE=1 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.2e-18
Identity = 101/322 (31.37%), Postives = 157/322 (48.76%), Query Frame = 0

Query: 3   KYGLQLRVKSSQQKKPTRPPLPAPLGFQDDDDDD---VEREISRHASKNKALKDIEEQHK 62
           +YGL L  K+    +P    L  P  F  D DDD   V   + R A+K +A+K  + + +
Sbjct: 7   QYGLILPKKT----QPLHRVLQKPSVFGSDSDDDETSVSESLQREAAKKQAMKQTKLEIQ 66

Query: 63  KALEEDPSVFDYDGVYDEMKEKAVQ--PRANDREERKPKYIQNLLKKAKEREREQEIIYE 122
           KAL ED +V++YD VYDEM++K  +  P+    ++RKPKYI NLLK  + R++EQE   E
Sbjct: 67  KALAEDSTVYEYDSVYDEMQKKKEENNPKLLPGKDRKPKYIHNLLKAVEIRKKEQEKRME 126

Query: 123 RKLAKDRSKEDHLYVDKDKFVTGAYKRKLAEQAKWMEEERLRQLREEKEDVTKKSDITDF 182
           +K+ ++R  E+  + DK+ FVT AYK+KL E+A+  E E+     E   DVTK+ D++ F
Sbjct: 127 KKIQREREMENGEFDDKEAFVTSAYKKKLEERAEEEEREKRAAALEAHLDVTKQKDLSGF 186

Query: 183 YFNLQKNIAYGAADAVKPR--------EPSKLQSEKPEKQTDVLKPTDFQKLEKHEESAS 242
           Y +L  N A G   A K          +  KL+    E  ++   P     L++  + A 
Sbjct: 187 YRHL-LNQAVGEEAAPKSSFREARTVIKEEKLRGYPDETNSESRPPQQSCVLQRGAQEAE 246

Query: 243 DTSDNLPSSKYSDLPSQSAKTIEDHPHLAEKDHSVSNKTTPPDAGDTSPLSLSDKTAVEE 302
           +  D     ++ D  S+  +         ++DH V  K+   D G +       K     
Sbjct: 247 ENPD--ADREFDDESSEDGE---------KRDHKV--KSRGEDTGASMKHPKHHKNRAHS 306

Query: 303 QPKLDEGEQQPKRDHHKRSEDA 312
           +   +E     K  HH R   +
Sbjct: 307 RSSSEERGLGTK--HHSRGSQS 308

BLAST of Sed0023461 vs. ExPASy Swiss-Prot
Match: Q4FZU3 (Nuclear speckle splicing regulatory protein 1 OS=Rattus norvegicus OX=10116 GN=Nsrp1 PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 5.9e-18
Identity = 98/314 (31.21%), Postives = 157/314 (50.00%), Query Frame = 0

Query: 3   KYGLQLRVKSSQQKKPTRPPLPAPLGFQDDDDDD---VEREISRHASKNKALKDIEEQHK 62
           +YGL L  K+    +P    L  P  F +D DDD   V   + R A+K +A++  + + +
Sbjct: 7   QYGLILPKKT----QPLNRVLQKPSVFGNDSDDDEASVSESLQREAAKKQAMRQTKLEIQ 66

Query: 63  KALEEDPSVFDYDGVYDEMKEKAVQ--PRANDREERKPKYIQNLLKKAKEREREQEIIYE 122
           KAL ED +V++YD +YDEM++K  +  P+    ++RKPKYI NLLK  + R++EQE   E
Sbjct: 67  KALAEDSTVYEYDSIYDEMQKKKEENNPKLLMGKDRKPKYIHNLLKAVEIRKKEQEKRME 126

Query: 123 RKLAKDRSKEDHLYVDKDKFVTGAYKRKLAEQAKWMEEERLRQLREEKEDVTKKSDITDF 182
           +K+ ++R  E   + DK+ FVT AYK+KL E+A+  E E+     E + DVTK+ D++ F
Sbjct: 127 KKIQREREMEKGEFDDKEAFVTSAYKKKLEERAEEEEREKRAAALEARLDVTKQKDLSGF 186

Query: 183 YFNLQKNIAYGAADAVKPREPSKLQSEKPEKQTDVLKPTDFQKLEKHEESASDTSDNLPS 242
           Y +L  N A G     K          K EK      P +     + +++ +  S    +
Sbjct: 187 YRHL-LNQAVGEEAVPKSSFREARTVIKEEKLRGY--PDETNSENRPQQNCALQSGVEEA 246

Query: 243 SKYSDLPSQSAKTIEDHPHLAEKDHSVSNKTTPPDAGDTSPLSLSDKTAVEEQPKLDEGE 302
            +  D  S S ++ +D       DH V ++    D G ++      K     +   +EG 
Sbjct: 247 EENPDADSDSEESCDDG---ERGDHKVKSR-GEEDTGASTKYLKHHKNHTHSRSSSEEGG 306

Query: 303 QQPKRDHHKRSEDA 312
              K  +H RS  +
Sbjct: 307 LSTK--YHSRSSQS 307

BLAST of Sed0023461 vs. ExPASy Swiss-Prot
Match: Q568R1 (Nuclear speckle splicing regulatory protein 1 OS=Danio rerio OX=7955 GN=nsrp1 PE=1 SV=2)

HSP 1 Score: 92.4 bits (228), Expect = 1.0e-17
Identity = 87/314 (27.71%), Postives = 151/314 (48.09%), Query Frame = 0

Query: 1   MSKYGLQLRVKSSQQKKPTRPPLPAPLGFQDDDDDD--VEREISRHASKNKALKDIEEQH 60
           M+  G Q  +   Q++     PL  P  F DD DD+  V   + + A K K +K    + 
Sbjct: 1   MATSGKQYGLILPQKRASKSAPLARPSVFGDDSDDETSVGESLQKEAIKKKMMKQTRLEM 60

Query: 61  KKALEEDPSVFDYDGVYDEMKEKAVQPRAN--DREERKPKYIQNLLKKAKEREREQEIIY 120
           +KALEED +V++YD VYD+++++ ++        E++KPKYI  LL+  +ER++EQE   
Sbjct: 61  QKALEEDSTVYEYDNVYDDIQKQRLESNKKLLGGEDKKPKYINQLLRAVEERKKEQERRD 120

Query: 121 ERKLAKDRSKEDHLYVDKDKFVTGAYKRKLAEQAKWMEEERLRQLREEKEDVTKKSDITD 180
           ERK+ K+R  E   + DK+ FVT AY++KL E+ + +E E+     E   DV K+ D++ 
Sbjct: 121 ERKIQKEREAEGEKFADKEAFVTSAYRQKLKERQEELEREKREAELEAALDVKKQKDLSG 180

Query: 181 FYFNLQKNIAYGAADAVKPREPSKLQSEKPEKQTDVLKPTDFQKLEKHEESASDTSDNLP 240
           FY +    +     + V P   ++ + +          P+      + E  A   SD+  
Sbjct: 181 FYRHF---LNQTVGEEVVPDRSAQSEEKATSSAAAERSPSPESTANRRESEAESHSDD-- 240

Query: 241 SSKYSDLPSQSAKTIEDHPHLAEKDHSVSNKTTPPDAGDTSPLSLSDKTAVEEQPKLDEG 300
             +    P+ S  T  +H   A++ +   +  +  D GD       ++  ++E+   D  
Sbjct: 241 -DQVDVKPAFSKTTANNH---AKRQYRQKSPLSDSDDGDERE---RERKEIKEKSHKDRD 300

Query: 301 EQQPKRDHHKRSED 311
             + K    +R  D
Sbjct: 301 RDRAKEKERERMRD 302

BLAST of Sed0023461 vs. ExPASy TrEMBL
Match: A0A6J1CNT9 (nuclear speckle splicing regulatory protein 1-like OS=Momordica charantia OX=3673 GN=LOC111012717 PE=3 SV=1)

HSP 1 Score: 466.8 bits (1200), Expect = 7.2e-128
Identity = 265/330 (80.30%), Postives = 291/330 (88.18%), Query Frame = 0

Query: 1   MSKYGLQLRVKSSQQKKPTRPPLPAPLGFQDDDDDDVEREISRHASKNKALKDIEEQHKK 60
           MSKYGLQLRVK SQQK+PTRPPLP  LGFQDDDD+DVEREISR A+KNKALKDIEEQHKK
Sbjct: 1   MSKYGLQLRVKPSQQKQPTRPPLPPSLGFQDDDDNDVEREISRQATKNKALKDIEEQHKK 60

Query: 61  ALEEDPSVFDYDGVYDEMKEKAVQPRANDREERKPKYIQNLLKKAKEREREQEIIYERKL 120
           ALEEDPSVFDYDGVYDEMKE+ VQPRA+DREERKPKYIQNL+KKAKEREREQEIIYERKL
Sbjct: 61  ALEEDPSVFDYDGVYDEMKERMVQPRAHDREERKPKYIQNLMKKAKEREREQEIIYERKL 120

Query: 121 AKDRSKEDHLYVDKDKFVTGAYKRKLAEQAKWMEEERLRQLREEKEDVTKKSDITDFYFN 180
           AK+RSKEDHLY  KDKFVTGAYK+KLAEQAKWMEEERLRQLREEKEDVTKKSDI+DFYFN
Sbjct: 121 AKERSKEDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDFYFN 180

Query: 181 LQKNIAYGAADAVKPREPSK-LQSEKPEKQTDVLKPTDFQKLEKHEESA-SDTSDNLPSS 240
           LQKNIA+GA +AVK REP K LQSE+ EK ++V      ++LEKHEESA +DTS+N  SS
Sbjct: 181 LQKNIAFGAENAVKSREPPKQLQSEEQEKHSEV------RELEKHEESANADTSNNSQSS 240

Query: 241 KYSDLPSQSAKTIEDHPHLAEKDHSVSNKTTPPDAGDTSPLSLSDKTAVEEQPKLDEGEQ 300
           K S+LPSQSAK +E+HP   E+D  VSNKTTP    D SP SL DKT+V+EQPK  +GEQ
Sbjct: 241 KQSNLPSQSAKMVEEHP---EEDFLVSNKTTP---SDVSPPSLHDKTSVQEQPKHGQGEQ 300

Query: 301 QPKRDHHKRSEDAVTAAKARFLARKRAKEV 329
           QPKRDHHKRSEDAVTAAK RFLARKRAK+V
Sbjct: 301 QPKRDHHKRSEDAVTAAKERFLARKRAKDV 318

BLAST of Sed0023461 vs. ExPASy TrEMBL
Match: A0A6J1EHK7 (nuclear speckle splicing regulatory protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111434242 PE=3 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 3.1e-123
Identity = 258/330 (78.18%), Postives = 279/330 (84.55%), Query Frame = 0

Query: 1   MSKYGLQLRVKSSQQKKPTRPPLPAPLGFQDDDDDDVEREISRHASKNKALKDIEEQHKK 60
           MSKYGLQLRVK SQQK+PTRPPLPAPLGFQDDDDDDVEREISR ASKNKALKDIEEQHKK
Sbjct: 1   MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK 60

Query: 61  ALEEDPSVFDYDGVYDEMKEKAVQPRANDREERKPKYIQNLLKKAKEREREQEIIYERKL 120
           AL EDPSVFDYDGVYDEMKEKAV PRA DREERKPKYIQNL+KKAKEREREQE+IYERKL
Sbjct: 61  ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL 120

Query: 121 AKDRSKEDHLYVDKDKFVTGAYKRKLAEQAKWMEEERLRQLREEKEDVTKKSDITDFYFN 180
           AK+RSK+DHLY  KDKFVT AYK+KLAEQAKWMEEERLRQLREEK+DVTKKSDI+DFYFN
Sbjct: 121 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN 180

Query: 181 LQKNIAYGAADAVKPRE-PSKLQSEKPEKQTDVLKPTDFQKLEKHEESA-SDTSDNLPSS 240
           LQKNIAYGA +AV+PRE P KLQSE         K  + QKL+KHEESA +D  ++  S 
Sbjct: 181 LQKNIAYGAGNAVEPREPPQKLQSE---------KQAEVQKLKKHEESANADIVNDHQSP 240

Query: 241 KYSDLPSQSAKTIEDHPHLAEKDHSVSNKTTPPDAGDTSPLSLSDKTAVEEQPKLDEGEQ 300
           KY   PSQSAKTIE   HL E+  S SNKTTP D   TSP  L ++T VE+QP+ D+GEQ
Sbjct: 241 KYPSSPSQSAKTIEQDRHL-EEHLSNSNKTTPSDVRGTSPPPLHNRTPVEKQPEHDQGEQ 300

Query: 301 QPKRDHHKRSEDAVTAAKARFLARKRAKEV 329
           QPKRDHHKRSEDAV AAK RFLARKR KEV
Sbjct: 301 QPKRDHHKRSEDAVAAAKERFLARKRTKEV 320

BLAST of Sed0023461 vs. ExPASy TrEMBL
Match: A0A6J1I6R6 (nuclear speckle splicing regulatory protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111471664 PE=3 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 5.3e-123
Identity = 258/330 (78.18%), Postives = 278/330 (84.24%), Query Frame = 0

Query: 1   MSKYGLQLRVKSSQQKKPTRPPLPAPLGFQDDDDDDVEREISRHASKNKALKDIEEQHKK 60
           MSKYGLQLRVK SQQK+PTRPPLPAPLGFQDDDDDDVEREISR ASKNKALKDIEEQHKK
Sbjct: 1   MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK 60

Query: 61  ALEEDPSVFDYDGVYDEMKEKAVQPRANDREERKPKYIQNLLKKAKEREREQEIIYERKL 120
           AL EDPSVFDYDGVYDEMKEKAV PRA DREERKPKYIQNL+KKAKEREREQE+IYERKL
Sbjct: 61  ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL 120

Query: 121 AKDRSKEDHLYVDKDKFVTGAYKRKLAEQAKWMEEERLRQLREEKEDVTKKSDITDFYFN 180
           AK+RSK+DHLY  KDKFVT AYK+KLAEQAKWMEEERLRQLREEK+DVTKKSDI+DFYFN
Sbjct: 121 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN 180

Query: 181 LQKNIAYGAADAVKPRE-PSKLQSEKPEKQTDVLKPTDFQKLEKHEESA-SDTSDNLPSS 240
           LQKNIAYGA +AV+PRE P KLQSE         K  D QK++KH ESA +D  ++  S 
Sbjct: 181 LQKNIAYGAGNAVEPREPPQKLQSE---------KQADVQKMKKHGESANADIVNDHQSP 240

Query: 241 KYSDLPSQSAKTIEDHPHLAEKDHSVSNKTTPPDAGDTSPLSLSDKTAVEEQPKLDEGEQ 300
           KY   PSQSAKTIE   HL E+  S SNKTTP D   TSP  L +KT VE+QP+ D+GEQ
Sbjct: 241 KYPSSPSQSAKTIEQDRHL-EEHLSNSNKTTPSDVRGTSPPPLHNKTPVEKQPEHDQGEQ 300

Query: 301 QPKRDHHKRSEDAVTAAKARFLARKRAKEV 329
           QPKRDHHKRSEDAV AAK RFLARKR KEV
Sbjct: 301 QPKRDHHKRSEDAVAAAKERFLARKRTKEV 320

BLAST of Sed0023461 vs. ExPASy TrEMBL
Match: A0A0A0LJE9 (DUF2040 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G070270 PE=3 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 3.5e-122
Identity = 253/329 (76.90%), Postives = 279/329 (84.80%), Query Frame = 0

Query: 1   MSKYGLQLRVKSSQQKKPTRPPLPAPLGFQDDDDDDVEREISRHASKNKALKDIEEQHKK 60
           MSKYGLQLRVK SQQK+PTRPPLPAPLGFQDDDDDDVEREISR ASKNKALKDIEEQHKK
Sbjct: 1   MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK 60

Query: 61  ALEEDPSVFDYDGVYDEMKEKAVQPRANDREERKPKYIQNLLKKAKEREREQEIIYERKL 120
           ALEEDPSVFDYDGVYDEMKEK VQPRA DREERKPKYIQNL+KKA+EREREQEIIYERKL
Sbjct: 61  ALEEDPSVFDYDGVYDEMKEKVVQPRAYDREERKPKYIQNLMKKAQEREREQEIIYERKL 120

Query: 121 AKDRSKEDHLYVDKDKFVTGAYKRKLAEQAKWMEEERLRQLREEKEDVTKKSDITDFYFN 180
           AK+RSK+DHLY  KDKFVTGAYK+KLAEQAKWMEEERLRQLREEKEDVTKKSD++DFYF+
Sbjct: 121 AKERSKDDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDMSDFYFS 180

Query: 181 LQKNIAYGAADAVKP-REPSKLQSEKPEKQTDVLKPTDFQKLEKHEESASDTSDNLPSSK 240
           LQKN+AYGA +A++P   P KLQ EK EKQT+V        LEKHEES +  + N    +
Sbjct: 181 LQKNVAYGARNAIEPTAPPKKLQLEKKEKQTEV------HILEKHEESCNGDTFNDHLLQ 240

Query: 241 YSDLPSQSAKTIEDHPHLAEKDHSVSNKTTPPDAGDTSPLSLSDKTAVEEQPKLDEGEQQ 300
            S+LPS S KTIE+HPHL E+    SNKTTP +   TSP +L DKT V+EQPK ++ EQ 
Sbjct: 241 NSNLPSCSEKTIEEHPHLEER-LPFSNKTTPSNIEGTSPPTLHDKTPVQEQPKHEQSEQP 300

Query: 301 PKRDHHKRSEDAVTAAKARFLARKRAKEV 329
           PK DHHKR+EDAV AAK RFLARKRAKEV
Sbjct: 301 PKSDHHKRNEDAVAAAKERFLARKRAKEV 322

BLAST of Sed0023461 vs. ExPASy TrEMBL
Match: A0A1S4E1R3 (nuclear speckle splicing regulatory protein 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492150 PE=3 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 6.1e-119
Identity = 248/329 (75.38%), Postives = 275/329 (83.59%), Query Frame = 0

Query: 1   MSKYGLQLRVKSSQQKKPTRPPLPAPLGFQDDDDDDVEREISRHASKNKALKDIEEQHKK 60
           MSKYGLQLRVK SQQK+P RPPLPAPLGFQDDDDD+VEREISR ASKNKALKDIEEQHKK
Sbjct: 1   MSKYGLQLRVKPSQQKQPKRPPLPAPLGFQDDDDDNVEREISRQASKNKALKDIEEQHKK 60

Query: 61  ALEEDPSVFDYDGVYDEMKEKAVQPRANDREERKPKYIQNLLKKAKEREREQEIIYERKL 120
           ALEEDPSVFDYDGVYDEMKEKAVQPRA DREERKPKYIQNL+KKA+EREREQEIIYERKL
Sbjct: 61  ALEEDPSVFDYDGVYDEMKEKAVQPRAYDREERKPKYIQNLMKKAQEREREQEIIYERKL 120

Query: 121 AKDRSKEDHLYVDKDKFVTGAYKRKLAEQAKWMEEERLRQLREEKEDVTKKSDITDFYFN 180
           AK+RSK+DHLY  KDKFVT AYK+KLAEQAKWMEEERLRQLREEKEDVTKKSD++DFYF+
Sbjct: 121 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDMSDFYFS 180

Query: 181 LQKNIAYGAADAVKPR-EPSKLQSEKPEKQTDVLKPTDFQKLEKHEESASDTSDNLPSSK 240
           LQKN+AYGA +A++PR  P KLQ EK EKQT+V        LEKHEES +          
Sbjct: 181 LQKNVAYGARNAIEPRATPKKLQLEKKEKQTEV------HILEKHEESCN-------GDT 240

Query: 241 YSDLPSQSAKTIEDHPHLAEKDHSVSNKTTPPDAGDTSPLSLSDKTAVEEQPKLDEGEQQ 300
           ++D   Q++KTIE+H HL E+  S SNKTTP D   TSP +L DK  V+E+PK +  EQ 
Sbjct: 241 FNDHQLQNSKTIEEHSHLEER-LSASNKTTPSDIEGTSPPTLHDKALVQERPKHELSEQP 300

Query: 301 PKRDHHKRSEDAVTAAKARFLARKRAKEV 329
           PKRDHHKR+EDAV AAK RFLARKRAKEV
Sbjct: 301 PKRDHHKRNEDAVAAAKERFLARKRAKEV 315

BLAST of Sed0023461 vs. TAIR 10
Match: AT2G27285.1 (Coiled-coil domain-containing protein 55 (DUF2040) )

HSP 1 Score: 268.9 bits (686), Expect = 5.5e-72
Identity = 168/330 (50.91%), Postives = 221/330 (66.97%), Query Frame = 0

Query: 1   MSKYGLQLRVKSSQQKKPTRPPLPAPLGFQDDDDDDVEREISRHASKNKALKDIEEQHKK 60
           M KYGLQ+R  S +++  +RPPL     F +++D DVE+EISR A+K KA K+IEEQHKK
Sbjct: 1   MKKYGLQIRAPSQKKQSSSRPPLRPASIFDEEEDHDVEKEISRQATKTKAHKEIEEQHKK 60

Query: 61  ALEEDPSVFDYDGVYDEMKEKAVQPRANDREERKPKYIQNLLKKAKEREREQEIIYERKL 120
           ALEEDPS F YD VYD+MK+KAV PR  DREERKP+YIQNL+K+A+ RE+E EI+YERKL
Sbjct: 61  ALEEDPSAFSYDEVYDDMKQKAVLPRMQDREERKPRYIQNLMKQAERREKEHEIVYERKL 120

Query: 121 AKDRSKEDHLYVDKDKFVTGAYKRKLAEQAKWMEEERLRQLREEKEDVTKKSDITDFYFN 180
           AK+R K++HL+ DK+KFVTGAYKRKL EQ KW+ EERLR+LREE++DVTKK D++DFYFN
Sbjct: 121 AKEREKDEHLFSDKEKFVTGAYKRKLEEQKKWLAEERLRELREERDDVTKKKDLSDFYFN 180

Query: 181 LQKNIAYGAADAVKPREPSKLQ----SEKPEKQTDVLKPTDFQKLEKHEESASDTSDNLP 240
           + KN+A+GA + V+ +E  KL+    +EK E+Q    K  + +K     E    + +   
Sbjct: 181 IGKNVAFGARE-VEAKEAEKLEEQRKAEKLEEQRKAEKLEELRKEVTRVEKKRKSPEKEV 240

Query: 241 SSKYSDLPSQSAKTIEDHPHLAEKDHSVSNKTTPPDAGDTSPLSLSDKTAVEEQPKLDEG 300
           S    +  S  +K++E      E + +VS K    D   T     S K A +E PK    
Sbjct: 241 SPDSGEFGSSRSKSLEP----LEAEQAVSEKEMGSDG--TEERKSSIKEAAKEVPKAIND 300

Query: 301 EQQPKRDHHKRSEDAVTAAKARFLARKRAK 327
           +        KR EDA+ AAK RFLARK+AK
Sbjct: 301 Q--------KRREDAIAAAKERFLARKKAK 315

BLAST of Sed0023461 vs. TAIR 10
Match: AT2G27280.1 (Coiled-coil domain-containing protein 55 (DUF2040) )

HSP 1 Score: 234.2 bits (596), Expect = 1.5e-61
Identity = 146/327 (44.65%), Postives = 210/327 (64.22%), Query Frame = 0

Query: 1   MSKYGLQLRVKSSQQKKPTRPPL-PAPLGFQDDDDDDVEREISRHASKNKALKDIEEQHK 60
           + KYGLQ+R  S +++  +RP L  A +  +DD+++DVE+EISR ASK K+LK IE+QHK
Sbjct: 142 IKKYGLQIRAPSQKKQSSSRPLLRTASIFGEDDEENDVEKEISRQASKTKSLKKIEKQHK 201

Query: 61  KALEEDPSVFDYDGVYDEMKEKAVQPRANDREERKPKYIQNLLKKAKEREREQEIIYERK 120
           KA+EEDPS F YD VYD++K +A  PR  DREE K +YIQ+++K+A+ RE+E EI+YERK
Sbjct: 202 KAIEEDPSAFAYDEVYDDIKHEAALPRMQDREEHKSRYIQHIMKQAERREKEHEIVYERK 261

Query: 121 LAKDRSKEDHLYVDKDKFVTGAYKRKLAEQAKWMEEERLRQLREEKEDVTKKSDITDFYF 180
           LAK+R+K++HLY DK+KFVTG +KRKL EQ KW+EEERLR+LREE++DVTKK+D+++FY 
Sbjct: 262 LAKERAKDEHLYSDKEKFVTGPFKRKLEEQKKWLEEERLRELREERDDVTKKNDLSEFYI 321

Query: 181 NLQKNIAYGAADAVKPREPSKLQSEKPEKQTDVLKPTDFQKLEKHEESASDTSDNLPSSK 240
           N+ KN+A+GA D ++ RE  +L+              + +K+++ EE   + +       
Sbjct: 322 NIGKNVAFGARD-IEAREAGRLK--------------ELRKVDRLEELRKEETRK----- 381

Query: 241 YSDLPSQSAKTIEDHPHLAEKDHSVSNKTTPPDAGDTSPLSLSDKTAVEEQPKLDEGEQQ 300
                              EK      K   PD+GD     LS K +V  +P+    +++
Sbjct: 382 -------------------EKKRKSPEKEVSPDSGD---FGLSSKKSV--KPQDASIKEE 424

Query: 301 PKRDHHKRSEDAVTAAKARFLARKRAK 327
            K       EDA+  AK RFL+RK+AK
Sbjct: 442 AKETQKATREDAIATAKERFLSRKKAK 424

BLAST of Sed0023461 vs. TAIR 10
Match: AT1G55928.1 (Coiled-coil domain-containing protein 55 (DUF2040) )

HSP 1 Score: 201.8 bits (512), Expect = 8.3e-52
Identity = 134/293 (45.73%), Postives = 191/293 (65.19%), Query Frame = 0

Query: 1   MSKYGLQLRVKSSQQKKPTRPPLPAPLGFQDDDDDDVEREISRHASKNKALKDIEEQHKK 60
           M+K+GLQLR   S++  P      AP+  +D++D+DV++EISR ASK K+LK  EEQHKK
Sbjct: 12  MNKFGLQLRKTLSKKVLPI-----APILGEDEEDNDVDKEISRQASKTKSLKKFEEQHKK 71

Query: 61  ALEEDPSVFDYDGVYDEMKEKAVQPRANDREE-RKPKYIQNLLKKAKEREREQEIIYERK 120
           ALEEDP  F YD VYD+ K++A  PR ++R+E  KP Y Q + +KA  R++E+EI+YERK
Sbjct: 72  ALEEDPCAFAYDEVYDDTKQEAPLPRLHERQECNKPIYNQLMKEKADRRQKEREIVYERK 131

Query: 121 LAKDRSKEDHLYVDKDKFVTGAYKRKLAEQAKWMEEERLRQLREEKEDVTKKSDITDFYF 180
           LAK+R+KE HL+ D+ K VTG+YKRKL E+ +W+ EERLR+L EEK+DVTKK D++DFYF
Sbjct: 132 LAKERAKEQHLFPDQVKVVTGSYKRKLEERDQWLSEERLRELGEEKDDVTKKKDLSDFYF 191

Query: 181 NLQKNIAYGAADAVKPREPSKLQSEKPEKQTDVLKPTDFQKLEKHEESASDTSDNLPSSK 240
           N+ KN+A+GA D +K RE  +L+ ++        K    ++L +  ++ S     LP S+
Sbjct: 192 NIGKNVAFGARD-IKARETERLKEQR--------KVPKLEELREKMKTESPERVVLPDSR 251

Query: 241 YSDLPSQSAKTIEDHPHLAEKDHSVSNKTTPPDAGDTSPLSLSDKTAVEEQPK 293
             D+ S     +E    L E +H  S +    DA  T    LS K A + +P+
Sbjct: 252 --DIGSSCRIIVE----LQEAEHVASEEKMNSDA--TEERDLSIKGAAKHEPR 282

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022142663.11.5e-12780.30nuclear speckle splicing regulatory protein 1-like [Momordica charantia][more]
XP_038877232.14.3e-12779.64nuclear speckle splicing regulatory protein 1-like [Benincasa hispida] >XP_03887... [more]
XP_022927406.16.5e-12378.18nuclear speckle splicing regulatory protein 1-like [Cucurbita moschata] >XP_0229... [more]
XP_023520694.18.4e-12378.18nuclear speckle splicing regulatory protein 1-like [Cucurbita pepo subsp. pepo][more]
XP_022973152.11.1e-12278.18nuclear speckle splicing regulatory protein 1-like [Cucurbita maxima] >XP_022973... [more]
Match NameE-valueIdentityDescription
Q2KIC04.6e-2341.85Nuclear speckle splicing regulatory protein 1 OS=Bos taurus OX=9913 GN=NSRP1 PE=... [more]
Q9H0G56.9e-1930.50Nuclear speckle splicing regulatory protein 1 OS=Homo sapiens OX=9606 GN=NSRP1 P... [more]
Q5NCR91.2e-1831.37Nuclear speckle splicing regulatory protein 1 OS=Mus musculus OX=10090 GN=Nsrp1 ... [more]
Q4FZU35.9e-1831.21Nuclear speckle splicing regulatory protein 1 OS=Rattus norvegicus OX=10116 GN=N... [more]
Q568R11.0e-1727.71Nuclear speckle splicing regulatory protein 1 OS=Danio rerio OX=7955 GN=nsrp1 PE... [more]
Match NameE-valueIdentityDescription
A0A6J1CNT97.2e-12880.30nuclear speckle splicing regulatory protein 1-like OS=Momordica charantia OX=367... [more]
A0A6J1EHK73.1e-12378.18nuclear speckle splicing regulatory protein 1-like OS=Cucurbita moschata OX=3662... [more]
A0A6J1I6R65.3e-12378.18nuclear speckle splicing regulatory protein 1-like OS=Cucurbita maxima OX=3661 G... [more]
A0A0A0LJE93.5e-12276.90DUF2040 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G070270 PE=... [more]
A0A1S4E1R36.1e-11975.38nuclear speckle splicing regulatory protein 1-like isoform X2 OS=Cucumis melo OX... [more]
Match NameE-valueIdentityDescription
AT2G27285.15.5e-7250.91Coiled-coil domain-containing protein 55 (DUF2040) [more]
AT2G27280.11.5e-6144.65Coiled-coil domain-containing protein 55 (DUF2040) [more]
AT1G55928.18.3e-5245.73Coiled-coil domain-containing protein 55 (DUF2040) [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 44..64
NoneNo IPR availableCOILSCoilCoilcoord: 144..171
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 267..284
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 231..248
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 197..230
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 287..328
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 252..266
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 190..328
NoneNo IPR availablePANTHERPTHR30060INNER MEMBRANE PROTEINcoord: 1..327
NoneNo IPR availablePANTHERPTHR30060:SF0COILED-COIL PROTEIN (DUF2040)-RELATEDcoord: 1..327
IPR018612Domain of unknown function DUF2040PFAMPF09745DUF2040coord: 55..171
e-value: 8.1E-39
score: 132.4

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0023461.1Sed0023461.1mRNA