Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGTGAGTATTTTTCCTCTTTTCTATATATTAATGTTGAACCACCTTATGCTTTCCTCAATATTATCACACTCATATTTCATGATCTTATAATAAATATGTATAAATAGATGATAACTGTCAATTAAATTAAACTCATTAATGAAGAGTTACAAATATTTAACTTTAAAATTTAAATTTTTTGAAAAAGAACTAATTTTCAAGTAGCTTTAACTTAAGGAATCGTTTGAATTGCGTTTTGAATGGGTATTCACTTTGATAAATGATTTTTTAGGATTATTTTGACTAGTTACAAAATTTAATCTTTTTATTAATAGTTAATTTTTTCTAAGAAGAGTTACAAATAATGACTTATTTGGATATTAATATTTAAAAGGATAAATTATTTTGAGTGATTATAAATAAACTATTTTGAATAATTAAAAATTAATGACCATCAATGAAAAATTAAATTGAATAATTTAAAAATAAATAATTAAAAATGAAAAAATTATTTTAAATAGTTTAAATATATTTGTTTAAAGTAATAATTACTATACTCATATCAAAATCAGTAAATTCTCTATAAATTCAACAAACAAAACAAATACAAGGACGTTAATTATCTGGAATTAATTCATAATCTGTTAAATTGGAAAGTTTAATTTAAAATTAAATGGCAGGGGGCAAAGTCGTCATCTCACGTTCCGAAATTCGGGGATTGGGACACAGACGACGTACCGTACACCATCTGTTTCGAGCACGCCAGCGAACTCCGAGCCGCCGGCCTCACCTTCGATCCCAACGATCCCGACACCTACCCGCCGGAGATCTTCGCTCCGTCCGCCCCCGCAGACCGGCGCCGGCACCGGGTTCAGGCCGCCACGCACGACGGCGGAAAACACCACCAGCAGCAGCAGCGGCGGCGGCGGCCCGGAGCGGAAGGAGCGATCGAACCGAGCTCCGGATTGGAGAAATTGAAGAGCGAGAGAAGCAGCTCCGATTACGCGCTGCTACAGAAGGAGCGGAAGCAGAGTAGGAGGAAGAAGAGCGGTGAGAATGGAGCGGAAGGAATCGGCAGATCTGCTCCGGCGGTGGGCGGAAACCCTAACCCTAAGTCTCGGCGGAGTGTTGAAGCTGAAATGGTGGCGTCGGTGCCGAAATCGGGAGATGGATACACGGCGGCTTTCAATAAAGTGAAGATCGAGAAGCAAATTGCGGCTTCCAAACCTCAGGCGGTTCCTCCGCCATTGATGAATCAAACCAAACACCCCATTGCTCACACCAACACCTCTACTTCATTTGCTTCCAAGGTACTACTCATCCACTTATTGACCTTCTTTTATTTTTAACCTTTTAAATATTTTTGTTCCCAAAGAAAATAAATTTAATACGGCTCAATTTTAGTCTTGAAATAATAAAATATTTAGTTTGTTTATATCCTATATAATATTAACTAAAATGGTACTTAAATTAATTTTAAATTTTAATATACCGATGAAATAATTATTTTAACTTTATGTAAATTTATTTTTTAAAATAAAAGTAAATTAAAATAATACAAAAGATGGAGAGAAATATCACGAAACTTTAAAAGAATATATATCACAAATAAAAATGTTCAATCTTGAAATTAGAAATTTAAAGATCAATTGAAAATAAATATTAAATATGAGGATCATAAATGTAATTTTTACTAAATTTAAATGCATGATAATTTAACCGAATGTGATGATTTCACGATTGGTTATGTGATATTAATCTATTTTCATTCCATAGTCACAAATTCGATTCTTGGAATTGGTAGTTGTAATCCCTCTTTCTCCAATTTATAATAAAAAAAATGCACGATAATTTAAAAAAGGGAAATTGTGTTGGACAATCCAATATTTCAAAAAATAATTACAAATTTAGGCAAATTTGAATTTTTTTTGAATCCATAATTAGATATACGACATAATTAATATTCTTATAATGTAGAGTATGATTACATTCTTTTTTATTATTAATACATTAAATCTTATATGTTATTAGAATAGTAGTGTATATTAATACAATATTATGTATTAATTATATCGTATAGTTTGTATACTATGATTACAAAATATTTTTTTGGCCTTGTATCAGTAAATATTTTTACAATTTAACTTGCTTCTAAAAATACTTCTTTCAAAAAAATTAGAGTCAACTTACTTTTTTTTAGATGGGTTAAAACTTTTATTTTCTAATTTTTTTATTAAATTCAATTAAATTAATATGTATTATTTTTTTAAAAAAATAATAATAAGGTCAATAAACTATTCTTATTTTTTAAAGGAGATGAATTTAAAATTAAAACTATCTTGAAACTTGGGATTGGTCCATTCACATCAATTAATGTTCGAATTTAAAATTATGCTGTATTATGCATAATCAATATAAAGTGAAATGAAATAACTAATACAGCGGGTTAACAACCTAACAGCTTGGCTTTGTACTCAAAATAACTGACTTCAACCTTACATTCAATTTAATTAACCAACCACATTCCCTAATTACCGTATAATGCAGATATGAAATATTTGTTATTATTATTACTATTTAAAGATAATGAAATATTTATTTATTAATGCAGATATGTTGTTGTTTTTGTCCAAAGTGA
mRNA sequence
ATGGCGGGGGCAAAGTCGTCATCTCACGTTCCGAAATTCGGGGATTGGGACACAGACGACGTACCGTACACCATCTGTTTCGAGCACGCCAGCGAACTCCGAGCCGCCGGCCTCACCTTCGATCCCAACGATCCCGACACCTACCCGCCGGAGATCTTCGCTCCGTCCGCCCCCGCAGACCGGCGCCGGCACCGGGTTCAGGCCGCCACGCACGACGGCGGAAAACACCACCAGCAGCAGCAGCGGCGGCGGCGGCCCGGAGCGGAAGGAGCGATCGAACCGAGCTCCGGATTGGAGAAATTGAAGAGCGAGAGAAGCAGCTCCGATTACGCGCTGCTACAGAAGGAGCGGAAGCAGAGTAGGAGGAAGAAGAGCGGTGAGAATGGAGCGGAAGGAATCGGCAGATCTGCTCCGGCGGTGGGCGGAAACCCTAACCCTAAGTCTCGGCGGAGTGTTGAAGCTGAAATGGTGGCGTCGGTGCCGAAATCGGGAGATGGATACACGGCGGCTTTCAATAAAGTGAAGATCGAGAAGCAAATTGCGGCTTCCAAACCTCAGGCGGTTCCTCCGCCATTGATGAATCAAACCAAACACCCCATTGCTCACACCAACACCTCTACTTCATTTGCTTCCAAGATATGTTGTTGTTTTTGTCCAAAGTGA
Coding sequence (CDS)
ATGGCGGGGGCAAAGTCGTCATCTCACGTTCCGAAATTCGGGGATTGGGACACAGACGACGTACCGTACACCATCTGTTTCGAGCACGCCAGCGAACTCCGAGCCGCCGGCCTCACCTTCGATCCCAACGATCCCGACACCTACCCGCCGGAGATCTTCGCTCCGTCCGCCCCCGCAGACCGGCGCCGGCACCGGGTTCAGGCCGCCACGCACGACGGCGGAAAACACCACCAGCAGCAGCAGCGGCGGCGGCGGCCCGGAGCGGAAGGAGCGATCGAACCGAGCTCCGGATTGGAGAAATTGAAGAGCGAGAGAAGCAGCTCCGATTACGCGCTGCTACAGAAGGAGCGGAAGCAGAGTAGGAGGAAGAAGAGCGGTGAGAATGGAGCGGAAGGAATCGGCAGATCTGCTCCGGCGGTGGGCGGAAACCCTAACCCTAAGTCTCGGCGGAGTGTTGAAGCTGAAATGGTGGCGTCGGTGCCGAAATCGGGAGATGGATACACGGCGGCTTTCAATAAAGTGAAGATCGAGAAGCAAATTGCGGCTTCCAAACCTCAGGCGGTTCCTCCGCCATTGATGAATCAAACCAAACACCCCATTGCTCACACCAACACCTCTACTTCATTTGCTTCCAAGATATGTTGTTGTTTTTGTCCAAAGTGA
Protein sequence
MAGAKSSSHVPKFGDWDTDDVPYTICFEHASELRAAGLTFDPNDPDTYPPEIFAPSAPADRRRHRVQAATHDGGKHHQQQQRRRRPGAEGAIEPSSGLEKLKSERSSSDYALLQKERKQSRRKKSGENGAEGIGRSAPAVGGNPNPKSRRSVEAEMVASVPKSGDGYTAAFNKVKIEKQIAASKPQAVPPPLMNQTKHPIAHTNTSTSFASKICCCFCPK
Homology
BLAST of Sed0022841 vs. NCBI nr
Match:
XP_022955116.1 (RPM1-interacting protein 4-like [Cucurbita moschata])
HSP 1 Score: 237.3 bits (604), Expect = 1.3e-58
Identity = 138/223 (61.88%), Postives = 154/223 (69.06%), Query Frame = 0
Query: 1 MAGAKSSSHVPKFGDWDTDDVPYTICFEHASELRAAGLTFDPNDPDTYPPEIFAPSAPAD 60
MAGAKSS HVPKFG+WDTDDVPYTICFE+A ELRAAG+TFDPNDPDTYPPE+F P A
Sbjct: 1 MAGAKSSFHVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVFKPVA--- 60
Query: 61 RRRHRVQAATHDGGKHHQQQQRRRRPGAEGAIEPSSGLEKLKSERSSSDYALLQKERKQS 120
HDGG+H Q++ R++P E +SG EKL SERS SDYALL
Sbjct: 61 ----------HDGGEH--QRRPRQQPNRERGAIINSGSEKLSSERSGSDYALL------- 120
Query: 121 RRKKSGENGAEGIGRSAPAVGGNPNPKSRRSVEAEMVASVPKSGDGYTAAFNKVKIEKQI 180
KKS ENG EGI R APAV G+ + A PKSGDGYTA FNK+KIEKQI
Sbjct: 121 --KKSKENGVEGISRLAPAVAGHGGNPASVPKFGSWDARDPKSGDGYTAIFNKMKIEKQI 180
Query: 181 AASKPQAVPPPLMNQTKHPIAHTNTS---TSFASKICCCFCPK 221
AAS PQ+V PPLMN+TK PIAHTNT+ TSFASKICCC K
Sbjct: 181 AASNPQSV-PPLMNKTKQPIAHTNTTSGFTSFASKICCCLRTK 198
BLAST of Sed0022841 vs. NCBI nr
Match:
XP_022994302.1 (RPM1-interacting protein 4-like [Cucurbita maxima])
HSP 1 Score: 235.0 bits (598), Expect = 6.4e-58
Identity = 139/227 (61.23%), Postives = 157/227 (69.16%), Query Frame = 0
Query: 1 MAGAKSSSHVPKFGDWDTDDVPYTICFEHASELRAAGLTFDPNDPDTYPPEIFAPSAPAD 60
MAGA SS HVPKFG+WDTDDVPYTICFE+A ELRAAG+TFDPNDPDTYPPE+F P+A
Sbjct: 1 MAGANSSIHVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVFKPAA--- 60
Query: 61 RRRHRVQAATHDGGKHHQQQQRRRRPGAEGAIEPSSGLEKLKSERSSSDYALLQKERKQS 120
H+GG+H Q++ R++P E +SG EKL SERS S+YALL
Sbjct: 61 ----------HNGGEH--QRRPRQQPNRERGAIMNSGSEKLSSERSGSNYALL------- 120
Query: 121 RRKKSGENGAEGIGRSAPAVGG---NPNPKSRRSVE-AEMVASVPKSGDGYTAAFNKVKI 180
KKS ENG EGI R APAV G NP P + + A PKSGDGYTA FNK+KI
Sbjct: 121 --KKSKENGVEGISRLAPAVAGHGVNPKPVTASVPKFGSWDAKDPKSGDGYTAIFNKMKI 180
Query: 181 EKQIAASKPQAVPPPLMNQTKHPIAHTNTS---TSFASKICCCFCPK 221
EKQIAAS PQAV PPLMN+TK PIAHTNT+ TSFASKICCC K
Sbjct: 181 EKQIAASNPQAV-PPLMNKTKQPIAHTNTTSGFTSFASKICCCLRAK 202
BLAST of Sed0022841 vs. NCBI nr
Match:
XP_023525812.1 (RPM1-interacting protein 4-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 234.2 bits (596), Expect = 1.1e-57
Identity = 136/223 (60.99%), Postives = 153/223 (68.61%), Query Frame = 0
Query: 1 MAGAKSSSHVPKFGDWDTDDVPYTICFEHASELRAAGLTFDPNDPDTYPPEIFAPSAPAD 60
MAGA SS HVPKFG+WDTDDVPYTICFE+A ELRAAG+ FDPNDPDTYPPE+F P+A
Sbjct: 1 MAGANSSFHVPKFGNWDTDDVPYTICFENARELRAAGINFDPNDPDTYPPEVFKPAA--- 60
Query: 61 RRRHRVQAATHDGGKHHQQQQRRRRPGAEGAIEPSSGLEKLKSERSSSDYALLQKERKQS 120
HDGG+H Q++ R++P E +SG EKL SERS SDYALL
Sbjct: 61 ----------HDGGEH--QRRPRQQPNRERGAIINSGSEKLSSERSGSDYALL------- 120
Query: 121 RRKKSGENGAEGIGRSAPAVGGNPNPKSRRSVEAEMVASVPKSGDGYTAAFNKVKIEKQI 180
KKS ENG EGI R APAV G+ + A PKSGDGYTA FNK+KIEKQI
Sbjct: 121 --KKSKENGVEGISRLAPAVAGHGGNPASVPKFGSWDARDPKSGDGYTAIFNKMKIEKQI 180
Query: 181 AASKPQAVPPPLMNQTKHPIAHTNTS---TSFASKICCCFCPK 221
AAS PQAV PPLMN++K PIAHTNT+ TSFASKICCC K
Sbjct: 181 AASNPQAV-PPLMNKSKQPIAHTNTTSGFTSFASKICCCLRTK 198
BLAST of Sed0022841 vs. NCBI nr
Match:
KAG6573489.1 (RPM1-interacting protein 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012628.1 RPM1-interacting protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 227.3 bits (578), Expect = 1.3e-55
Identity = 133/216 (61.57%), Postives = 149/216 (68.98%), Query Frame = 0
Query: 1 MAGAKSSSHVPKFGDWDTDDVPYTICFEHASELRAAGLTFDPNDPDTYPPEIFAPSAPAD 60
MAGA SS HVPKFG+WDTDDVPYTICFE+A ELRAAG+TFDPNDPDTYPPE+F P A
Sbjct: 1 MAGANSSFHVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVFKPVA--- 60
Query: 61 RRRHRVQAATHDGGKHHQQQQRRRRPGAEGAIEPSSGLEKLKSERSSSDYALLQKERKQS 120
HDGG+H Q++ R++P E +SG EKL SERS SDYALL
Sbjct: 61 ----------HDGGEH--QRRPRQQPNRERGAVINSGSEKLSSERSGSDYALL------- 120
Query: 121 RRKKSGENGAEGIGRSAPAVGGNPNPKSRRSVEAEMVASVPKSGDGYTAAFNKVKIEKQI 180
KKS ENG EGI R APAV G+ + A PKSGDGYTA FNK+KIEKQI
Sbjct: 121 --KKSKENGVEGISRLAPAVAGHGGNPASVPKFGSWDARDPKSGDGYTAIFNKMKIEKQI 180
Query: 181 AASKPQAVPPPLMNQTKHPIAHTNTS---TSFASKI 214
AAS PQAV PPLMN+TK PIAHTNT+ TSFASK+
Sbjct: 181 AASNPQAV-PPLMNKTKQPIAHTNTTSGFTSFASKV 191
BLAST of Sed0022841 vs. NCBI nr
Match:
XP_038895249.1 (RPM1-interacting protein 4-like isoform X2 [Benincasa hispida])
HSP 1 Score: 222.6 bits (566), Expect = 3.3e-54
Identity = 147/247 (59.51%), Postives = 157/247 (63.56%), Query Frame = 0
Query: 1 MAGAKSSSHVPKFGDWDTDDVPYTICFEHASELRAAGLTFDPNDPDTYPPE--IFAPSAP 60
MAGAKSSSHVPKFG+WD+DDVPYTICFE+A ELRAAG+ FDPNDPDTYPP I S P
Sbjct: 1 MAGAKSSSHVPKFGNWDSDDVPYTICFENARELRAAGVDFDPNDPDTYPPAAVINQNSTP 60
Query: 61 ADRRRHRVQAATHDGGKHHQQQQRRRRPGAEGAIEPSSGLEKLKSERSSSDYALLQKERK 120
AD R G +HQ RR G +SG EKL SERS SDYALL KE K
Sbjct: 61 ADHR-----------GDYHQ----RREMG-------NSGSEKLSSERSGSDYALL-KEAK 120
Query: 121 QSRRKKSGENGAEGIGRSAPAV-------GGNPNPKSRRSVEAEMVASV----------P 180
QS RKK NGAEG+ R P GN NP+ RR+ E EM+ASV P
Sbjct: 121 QSGRKKKHSNGAEGMSRFTPTTTVSGHGGKGNRNPRVRRNDEGEMMASVPKFGSWDVRDP 180
Query: 181 KSGDGYTAAFNKVKIEKQIAAS-KPQAVPPPLMNQTKH-PIAHTNT------STSFASKI 221
KSGDGYTA FNKVKIEKQI S PQAV PPLMNQTK PIA T T S SF SKI
Sbjct: 181 KSGDGYTAIFNKVKIEKQIGGSNNPQAV-PPLMNQTKKLPIAQTTTTATTHGSNSFVSKI 223
BLAST of Sed0022841 vs. ExPASy Swiss-Prot
Match:
Q8GYN5 (RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1)
HSP 1 Score: 57.0 bits (136), Expect = 3.1e-07
Identity = 64/224 (28.57%), Postives = 96/224 (42.86%), Query Frame = 0
Query: 8 SHVPKFGDWDTDD-VPYTICFEHASELRAAG-LTFDPNDPD-TYPPEIFAPSAPADRRRH 67
S+VPKFG+W+ ++ VPYT F+ A + RA G +PNDP+ + AP P R
Sbjct: 4 SNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPNDPEYNSDSQSQAPPHPPSSRTK 63
Query: 68 RVQAATHDGGKHHQQQQRRRRPGAEGAIEPSSGLEKLKSERSSSDYALLQKERKQSRRKK 127
Q T + H + + G SS +E ++ + +
Sbjct: 64 PEQVDTVRRSREHMRSREESELKQFGDAGGSS------NEAANKRQGRASQNNSYDNKSP 123
Query: 128 SGENGAEGIGRSAPAVGGNPNPKSRRSVEA-EMVASVPK----------SGDGYTAAFNK 187
+N +G G+S P P + R+ E+ E V VPK S DGYT FNK
Sbjct: 124 LHKNSYDGTGKS------RPKPTNLRADESPEKVTVVPKFGDWDENNPSSADGYTHIFNK 183
Query: 188 VKIEKQIAASKPQAVPPPLMNQTKHPIAHTNTSTSFASKICCCF 218
V+ E+ A+ + P +++P NTS+ CCCF
Sbjct: 184 VREERSSGANVSGSSRTPTHQSSRNP---NNTSS------CCCF 206
BLAST of Sed0022841 vs. ExPASy Swiss-Prot
Match:
Q8S3M3 (NOI-like protein OS=Elaeis oleifera OX=80265 PE=2 SV=1)
HSP 1 Score: 47.4 bits (111), Expect = 2.5e-04
Identity = 27/79 (34.18%), Postives = 41/79 (51.90%), Query Frame = 0
Query: 8 SHVPKFGDWDTDDVPYTICFEHASELRAAG-LTFDPNDPDTYPPEIFAPSAPADRRRHRV 67
+HVPKFG+WD +++ YT FE + G F+PNDP+ P+ F P A +H
Sbjct: 5 AHVPKFGNWDGENISYTTYFETVHRDKGDGSKIFNPNDPEE-NPQAFYPRTVAQDHQHSE 64
Query: 68 QAATHDGGKHHQQQQRRRR 86
+ +H +Q RR+
Sbjct: 65 KHHNDTSTDYHVVKQHRRK 82
BLAST of Sed0022841 vs. ExPASy TrEMBL
Match:
A0A6J1GSU2 (RPM1-interacting protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111457178 PE=4 SV=1)
HSP 1 Score: 237.3 bits (604), Expect = 6.2e-59
Identity = 138/223 (61.88%), Postives = 154/223 (69.06%), Query Frame = 0
Query: 1 MAGAKSSSHVPKFGDWDTDDVPYTICFEHASELRAAGLTFDPNDPDTYPPEIFAPSAPAD 60
MAGAKSS HVPKFG+WDTDDVPYTICFE+A ELRAAG+TFDPNDPDTYPPE+F P A
Sbjct: 1 MAGAKSSFHVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVFKPVA--- 60
Query: 61 RRRHRVQAATHDGGKHHQQQQRRRRPGAEGAIEPSSGLEKLKSERSSSDYALLQKERKQS 120
HDGG+H Q++ R++P E +SG EKL SERS SDYALL
Sbjct: 61 ----------HDGGEH--QRRPRQQPNRERGAIINSGSEKLSSERSGSDYALL------- 120
Query: 121 RRKKSGENGAEGIGRSAPAVGGNPNPKSRRSVEAEMVASVPKSGDGYTAAFNKVKIEKQI 180
KKS ENG EGI R APAV G+ + A PKSGDGYTA FNK+KIEKQI
Sbjct: 121 --KKSKENGVEGISRLAPAVAGHGGNPASVPKFGSWDARDPKSGDGYTAIFNKMKIEKQI 180
Query: 181 AASKPQAVPPPLMNQTKHPIAHTNTS---TSFASKICCCFCPK 221
AAS PQ+V PPLMN+TK PIAHTNT+ TSFASKICCC K
Sbjct: 181 AASNPQSV-PPLMNKTKQPIAHTNTTSGFTSFASKICCCLRTK 198
BLAST of Sed0022841 vs. ExPASy TrEMBL
Match:
A0A6J1JVE9 (RPM1-interacting protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111490070 PE=4 SV=1)
HSP 1 Score: 235.0 bits (598), Expect = 3.1e-58
Identity = 139/227 (61.23%), Postives = 157/227 (69.16%), Query Frame = 0
Query: 1 MAGAKSSSHVPKFGDWDTDDVPYTICFEHASELRAAGLTFDPNDPDTYPPEIFAPSAPAD 60
MAGA SS HVPKFG+WDTDDVPYTICFE+A ELRAAG+TFDPNDPDTYPPE+F P+A
Sbjct: 1 MAGANSSIHVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVFKPAA--- 60
Query: 61 RRRHRVQAATHDGGKHHQQQQRRRRPGAEGAIEPSSGLEKLKSERSSSDYALLQKERKQS 120
H+GG+H Q++ R++P E +SG EKL SERS S+YALL
Sbjct: 61 ----------HNGGEH--QRRPRQQPNRERGAIMNSGSEKLSSERSGSNYALL------- 120
Query: 121 RRKKSGENGAEGIGRSAPAVGG---NPNPKSRRSVE-AEMVASVPKSGDGYTAAFNKVKI 180
KKS ENG EGI R APAV G NP P + + A PKSGDGYTA FNK+KI
Sbjct: 121 --KKSKENGVEGISRLAPAVAGHGVNPKPVTASVPKFGSWDAKDPKSGDGYTAIFNKMKI 180
Query: 181 EKQIAASKPQAVPPPLMNQTKHPIAHTNTS---TSFASKICCCFCPK 221
EKQIAAS PQAV PPLMN+TK PIAHTNT+ TSFASKICCC K
Sbjct: 181 EKQIAASNPQAV-PPLMNKTKQPIAHTNTTSGFTSFASKICCCLRAK 202
BLAST of Sed0022841 vs. ExPASy TrEMBL
Match:
A0A1S3C9P5 (RPM1-interacting protein 4-like OS=Cucumis melo OX=3656 GN=LOC103498234 PE=4 SV=1)
HSP 1 Score: 221.9 bits (564), Expect = 2.7e-54
Identity = 138/241 (57.26%), Postives = 156/241 (64.73%), Query Frame = 0
Query: 1 MAGAKSSSHVPKFGDWDTDDVPYTICFEHASELRAAGLTFDPNDPDTYPPEIFA--PSAP 60
MAG KSSSHVPKFG+WD+DDVPYTI FE+A EL+AAG+TFDPNDPDTYPP +FA S P
Sbjct: 1 MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP 60
Query: 61 ADRRRHRVQAATHDGGKHHQQQQRRRRPGAEGAIEPSSGLEKLKSERSSSDYALLQKERK 120
AD RH HDG HQ+++ +SG EKL SERS SDYALL + K
Sbjct: 61 ADHHRH------HDGEDSHQRRE-----------IVNSGSEKLSSERSDSDYALL--KAK 120
Query: 121 QSRRKKSGENGAEGIGRSAPAV---GGNPNPKSRRSVEAEMVASV----------PKSGD 180
QS RKK NGAEG+ R +P GN NP+ RR+ E EM+ASV PKSGD
Sbjct: 121 QSGRKKKNSNGAEGMSRFSPTTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGD 180
Query: 181 GYTAAFNKVKIEKQIAASKPQAVPPPLMNQTKHP-----IAHTNT--STSFASKICCCFC 220
GYTA FNKVKIEKQI S PPLMNQTK P +A T+T STSF SKICCC
Sbjct: 181 GYTAIFNKVKIEKQIGGSNNPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKICCCLG 222
BLAST of Sed0022841 vs. ExPASy TrEMBL
Match:
A0A0A0M0M0 (AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G699040 PE=4 SV=1)
HSP 1 Score: 215.7 bits (548), Expect = 1.9e-52
Identity = 134/242 (55.37%), Postives = 153/242 (63.22%), Query Frame = 0
Query: 1 MAGAKSSSHVPKFGDWDTDDVPYTICFEHASELRAAGLTFDPNDPDTYPPEIFA--PSAP 60
MAG KSSSHVPKFG+WD+DDVPYTI FE+A EL+AAG+TFDPNDPDTYPP A S+P
Sbjct: 1 MAGPKSSSHVPKFGNWDSDDVPYTIYFENARELQAAGITFDPNDPDTYPPTAVANQNSSP 60
Query: 61 ADRRRHRVQAATHDGGKHHQQQQRRRRPGAEGAIEPSSGLEKLKSERSSSDYALLQKERK 120
A+ R+ HDG HQ+++ +SG EKL SERS SDYALL + K
Sbjct: 61 ANHHRY------HDGDDSHQRRE-----------IVNSGSEKLSSERSDSDYALL--KAK 120
Query: 121 QSRRKKSGENGAEGIGRSAPAV---GGNPNPKSRRSVEAEMVASV----------PKSGD 180
QS RKK NGAEG+ R +PA GN NP+ RR+ E EM+ASV PKSGD
Sbjct: 121 QSGRKKKNSNGAEGMSRFSPATVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGD 180
Query: 181 GYTAAFNKVKIEKQIAASKPQAVPPPLMNQTKHPIAHTNT-------STSFASKICCCFC 221
GYTA FNKVKIEKQ+ S P LMNQTK PI T STSF SKICCC
Sbjct: 181 GYTAIFNKVKIEKQVGGSNDTQSVPALMNQTKQPITQTTVGKSSSHGSTSFGSKICCCLY 223
BLAST of Sed0022841 vs. ExPASy TrEMBL
Match:
A0A6J1CND0 (RPM1-interacting protein 4-like OS=Momordica charantia OX=3673 GN=LOC111012692 PE=4 SV=1)
HSP 1 Score: 214.2 bits (544), Expect = 5.6e-52
Identity = 133/238 (55.88%), Postives = 152/238 (63.87%), Query Frame = 0
Query: 4 AKSSSHVPKFGDWDTDDVPYTICFEHASELRAAGLTFDPNDPDTYPPEIFAP----SAPA 63
AKSSSHVPKFG+WDTDDVPYTICFE+A ELRAAG+TFDPNDPDTYPPE F S P+
Sbjct: 3 AKSSSHVPKFGNWDTDDVPYTICFENAGELRAAGVTFDPNDPDTYPPEAFPAANHRSNPS 62
Query: 64 DRRRHRVQAATHDGGKHHQQQQRRRRPGAEGAIEPSSGLEKLKSERSSSDYALLQKERKQ 123
DRRRH HD + ++Q R R SSG EKL SERS SDY+LL ++
Sbjct: 63 DRRRH------HDHHRRPREQPNRDR--------RSSGSEKLSSERSGSDYSLL---KEP 122
Query: 124 SRRKKSGENGAEGIGRSAPAVGG-----NPNPKSRRSVEAEMVASV----------PKSG 183
R+K NG +GI R P G NPNP++RR+ E EMVASV PKSG
Sbjct: 123 GGRRKKINNGVDGISRFPPTAAGHGGNPNPNPRARRN-EGEMVASVPKFGSWDARDPKSG 182
Query: 184 DGYTAAFNKVKIEKQIAASKPQAVPPPLMNQTK-HPIAH-TNTSTSFASKICCCFCPK 221
DGYTA FNKVK+EK+I S PPL NQTK PI + STSF SK+CCC CPK
Sbjct: 183 DGYTAIFNKVKMEKKIGGSNSSQAVPPLTNQTKQQPIPQIVHGSTSFVSKVCCCLCPK 222
BLAST of Sed0022841 vs. TAIR 10
Match:
AT3G25070.1 (RPM1 interacting protein 4 )
HSP 1 Score: 57.0 bits (136), Expect = 2.2e-08
Identity = 64/224 (28.57%), Postives = 96/224 (42.86%), Query Frame = 0
Query: 8 SHVPKFGDWDTDD-VPYTICFEHASELRAAG-LTFDPNDPD-TYPPEIFAPSAPADRRRH 67
S+VPKFG+W+ ++ VPYT F+ A + RA G +PNDP+ + AP P R
Sbjct: 4 SNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPNDPEYNSDSQSQAPPHPPSSRTK 63
Query: 68 RVQAATHDGGKHHQQQQRRRRPGAEGAIEPSSGLEKLKSERSSSDYALLQKERKQSRRKK 127
Q T + H + + G SS +E ++ + +
Sbjct: 64 PEQVDTVRRSREHMRSREESELKQFGDAGGSS------NEAANKRQGRASQNNSYDNKSP 123
Query: 128 SGENGAEGIGRSAPAVGGNPNPKSRRSVEA-EMVASVPK----------SGDGYTAAFNK 187
+N +G G+S P P + R+ E+ E V VPK S DGYT FNK
Sbjct: 124 LHKNSYDGTGKS------RPKPTNLRADESPEKVTVVPKFGDWDENNPSSADGYTHIFNK 183
Query: 188 VKIEKQIAASKPQAVPPPLMNQTKHPIAHTNTSTSFASKICCCF 218
V+ E+ A+ + P +++P NTS+ CCCF
Sbjct: 184 VREERSSGANVSGSSRTPTHQSSRNP---NNTSS------CCCF 206
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022955116.1 | 1.3e-58 | 61.88 | RPM1-interacting protein 4-like [Cucurbita moschata] | [more] |
XP_022994302.1 | 6.4e-58 | 61.23 | RPM1-interacting protein 4-like [Cucurbita maxima] | [more] |
XP_023525812.1 | 1.1e-57 | 60.99 | RPM1-interacting protein 4-like [Cucurbita pepo subsp. pepo] | [more] |
KAG6573489.1 | 1.3e-55 | 61.57 | RPM1-interacting protein 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG... | [more] |
XP_038895249.1 | 3.3e-54 | 59.51 | RPM1-interacting protein 4-like isoform X2 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
Q8GYN5 | 3.1e-07 | 28.57 | RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1 | [more] |
Q8S3M3 | 2.5e-04 | 34.18 | NOI-like protein OS=Elaeis oleifera OX=80265 PE=2 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1GSU2 | 6.2e-59 | 61.88 | RPM1-interacting protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111457178 PE... | [more] |
A0A6J1JVE9 | 3.1e-58 | 61.23 | RPM1-interacting protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111490070 PE=4... | [more] |
A0A1S3C9P5 | 2.7e-54 | 57.26 | RPM1-interacting protein 4-like OS=Cucumis melo OX=3656 GN=LOC103498234 PE=4 SV=... | [more] |
A0A0A0M0M0 | 1.9e-52 | 55.37 | AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G69... | [more] |
A0A6J1CND0 | 5.6e-52 | 55.88 | RPM1-interacting protein 4-like OS=Momordica charantia OX=3673 GN=LOC111012692 P... | [more] |
Match Name | E-value | Identity | Description | |
AT3G25070.1 | 2.2e-08 | 28.57 | RPM1 interacting protein 4 | [more] |