Sed0022522 (gene) Chayote v1

Overview
NameSed0022522
Typegene
OrganismSechium edule (Chayote v1)
Descriptionleucine-rich repeat extensin-like protein 3 isoform X2
LocationLG01: 10400148 .. 10401352 (-)
RNA-Seq ExpressionSed0022522
SyntenySed0022522
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAGAAATGGATTAACATAACAACAGAATCACACCGACACTTTCGGTAATATATATATGTGTGTGTGTAATGAATGATCCCTGTAATTAGAATCACCATTTGGGTCTAATTCATCGGCCTTCTGTTTCTCTGCTTTCTTCCCAATCATCCATGGCGGACACCAAGGTCTGATTCTTTCCTTTTTTTTTTCTCATCCATTTTTCAGTTTGATTTACAGTTTCTGGTCCCTGCTGCTGCAGGTTGTTGTTATGGTGATTAAAGCAGAGCTCCAGTGCGATTGCTGCTGCAAGAAAGTCAAGAAAGTTCTCTGCAAGTTCCCTCGTCAGTTTCCTCTTCTCAATTCCCCTCTCTCTGTTTTTTTCTTTCATTTTCCCCAACTCAGTCTCTGTTTTCTTTGTTCGAGCATCAGAAATTCGAGACCAGATTTATGACGAGAAAAAAAATCTTGTCATCATCAAAGTGCTTTGTTGTAATCCCGAGAAGCTTAGAGATCAAATTTTCTGTATGGGTCGTGGGGTTATTACGACTATTGAAATCAAACCCCCTGAAGTTCCGCCCCCGATCCTCGATACTCAGAAGCCCAAACAAAATGCGGCCCAACAAAATGAACAACCACCGTCGGGGAAGAAGGAACCGGTGGTCGGCCAGAATCCCCCTCCGGTTCAGCCGGTTTCGGTGAACATATGCGTTCCGGTTCACGGGTACCCCCCGCCGTACCCGATGGATCTGTGTTGCAGGCCCTGCTGTGAAGGGCAGGGCGGGGGCCCATGTTCGAGCAAGCATGGGCGACCCTGCCCATGTCCGAGCGAGCCTGAGCGATCCGTCCCATGTTCGAGGGAGCCTGAGCGACCCTGCCCATGTCCGAGCGGGCATGGGCGACCCGGCCCATGTTGCGATGGGTGTGCTTCTGGAAGGCCCATTCCCTATTGCTACGGCGGAGGGAGTGCCCAATGTTACGTTATTCCTGATCAAAATGCGCCTGGGTGCAGTGCTATGTGACGCACGTGGCAGTTTCTGAATGGTGGTCATGGTTCGTTATGTGCATTTAAGTGTGATGATAATAAGGGGAGTTGAAAGTACTCAACTTTAAAATATCATTTTAGTTTTTCCATTTTGAAATTTGTTCTCATGTTAAATTTTAATCCTTCGTATTCTAAGTTTTCGAGATTTACCTCGTAACCGTATAATAAAAATGGATTAATATC

mRNA sequence

ATAGAAATGGATTAACATAACAACAGAATCACACCGACACTTTCGGTAATATATATATGTGTGTGTGTAATGAATGATCCCTGTAATTAGAATCACCATTTGGGTCTAATTCATCGGCCTTCTGTTTCTCTGCTTTCTTCCCAATCATCCATGGCGGACACCAAGGTTGTTGTTATGGTGATTAAAGCAGAGCTCCAGTGCGATTGCTGCTGCAAGAAAGTCAAGAAAGTTCTCTGCAAGTTCCCTCAAATTCGAGACCAGATTTATGACGAGAAAAAAAATCTTGTCATCATCAAAGTGCTTTGTTGTAATCCCGAGAAGCTTAGAGATCAAATTTTCTGTATGGGTCGTGGGGTTATTACGACTATTGAAATCAAACCCCCTGAAGTTCCGCCCCCGATCCTCGATACTCAGAAGCCCAAACAAAATGCGGCCCAACAAAATGAACAACCACCGTCGGGGAAGAAGGAACCGGTGGTCGGCCAGAATCCCCCTCCGGTTCAGCCGGTTTCGGTGAACATATGCGTTCCGGTTCACGGGTACCCCCCGCCGTACCCGATGGATCTGTGTTGCAGGCCCTGCTGTGAAGGGCAGGGCGGGGGCCCATGTTCGAGCAAGCATGGGCGACCCTGCCCATGTCCGAGCGAGCCTGAGCGATCCGTCCCATGTTCGAGGGAGCCTGAGCGACCCTGCCCATGTCCGAGCGGGCATGGGCGACCCGGCCCATGTTGCGATGGGTGTGCTTCTGGAAGGCCCATTCCCTATTGCTACGGCGGAGGGAGTGCCCAATGTTACGTTATTCCTGATCAAAATGCGCCTGGGTGCAGTGCTATGTGACGCACGTGGCAGTTTCTGAATGGTGGTCATGGTTCGTTATGTGCATTTAAGTGTGATGATAATAAGGGGAGTTGAAAGTACTCAACTTTAAAATATCATTTTAGTTTTTCCATTTTGAAATTTGTTCTCATGTTAAATTTTAATCCTTCGTATTCTAAGTTTTCGAGATTTACCTCGTAACCGTATAATAAAAATGGATTAATATC

Coding sequence (CDS)

ATGGCGGACACCAAGGTTGTTGTTATGGTGATTAAAGCAGAGCTCCAGTGCGATTGCTGCTGCAAGAAAGTCAAGAAAGTTCTCTGCAAGTTCCCTCAAATTCGAGACCAGATTTATGACGAGAAAAAAAATCTTGTCATCATCAAAGTGCTTTGTTGTAATCCCGAGAAGCTTAGAGATCAAATTTTCTGTATGGGTCGTGGGGTTATTACGACTATTGAAATCAAACCCCCTGAAGTTCCGCCCCCGATCCTCGATACTCAGAAGCCCAAACAAAATGCGGCCCAACAAAATGAACAACCACCGTCGGGGAAGAAGGAACCGGTGGTCGGCCAGAATCCCCCTCCGGTTCAGCCGGTTTCGGTGAACATATGCGTTCCGGTTCACGGGTACCCCCCGCCGTACCCGATGGATCTGTGTTGCAGGCCCTGCTGTGAAGGGCAGGGCGGGGGCCCATGTTCGAGCAAGCATGGGCGACCCTGCCCATGTCCGAGCGAGCCTGAGCGATCCGTCCCATGTTCGAGGGAGCCTGAGCGACCCTGCCCATGTCCGAGCGGGCATGGGCGACCCGGCCCATGTTGCGATGGGTGTGCTTCTGGAAGGCCCATTCCCTATTGCTACGGCGGAGGGAGTGCCCAATGTTACGTTATTCCTGATCAAAATGCGCCTGGGTGCAGTGCTATGTGA

Protein sequence

MADTKVVVMVIKAELQCDCCCKKVKKVLCKFPQIRDQIYDEKKNLVIIKVLCCNPEKLRDQIFCMGRGVITTIEIKPPEVPPPILDTQKPKQNAAQQNEQPPSGKKEPVVGQNPPPVQPVSVNICVPVHGYPPPYPMDLCCRPCCEGQGGGPCSSKHGRPCPCPSEPERSVPCSREPERPCPCPSGHGRPGPCCDGCASGRPIPYCYGGGSAQCYVIPDQNAPGCSAM
Homology
BLAST of Sed0022522 vs. NCBI nr
Match: XP_022925304.1 (uncharacterized protein LOC111432597 [Cucurbita moschata])

HSP 1 Score: 210.7 bits (535), Expect = 1.3e-50
Identity = 126/246 (51.22%), Postives = 150/246 (60.98%), Query Frame = 0

Query: 5   KVVVMVIKAELQCDCCCKKVKKVLCKFPQIRDQIYDEKKNLVIIKVLCCNPEKLRDQIFC 64
           KVV MV+K +LQC  C KKVKKV+CKFPQIRDQIYDEK+NLVIIKV+CCNPEKLRD+I C
Sbjct: 6   KVVTMVLKVDLQCHRCYKKVKKVICKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKICC 65

Query: 65  MGRGVITTIEIKPPEVPPPILDTQKPKQ----NAAQQNEQPPSGKKE-----------PV 124
            G GVI +I+I+ PE+P P+ D  +PK+       +  + PP  K +           PV
Sbjct: 66  KGCGVIKSIQIQDPEIPKPV-DPPRPKKVDPPRPQKVIDSPPPKKPDPTSPQKVVDPPPV 125

Query: 125 VGQNPPPVQ--PVSVNICVPVHGYPPPYPMDLCCRPCCEGQGGGPCSSKHGRPCPCPSEP 184
           V QNPPPVQ  PV  N CVPV G+PP YPM +CCR C EG+GGGPC              
Sbjct: 126 VVQNPPPVQAKPVPRNTCVPVAGHPPAYPMGVCCRECYEGRGGGPCY------------- 185

Query: 185 ERSVPCSREPERPCPCPSGHGRPGPCCDGCASGRPIPYCYGGGSAQCYVIP-----DQNA 229
                            SG GRP  CC+GCASGRPI   YGGG + CY+ P     ++NA
Sbjct: 186 -----------------SGFGRPRSCCEGCASGRPIYDSYGGGRS-CYISPCEYLNEENA 219

BLAST of Sed0022522 vs. NCBI nr
Match: XP_022967105.1 (protein PYRICULARIA ORYZAE RESISTANCE 21-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 210.3 bits (534), Expect = 1.7e-50
Identity = 128/243 (52.67%), Postives = 149/243 (61.32%), Query Frame = 0

Query: 1   MADT-KVVVMVIKAELQCDCCCKKVKKVLCKFPQIRDQIYDEKKNLVIIKVLCCNPEKLR 60
           MAD  KVV+M++K +LQC  C KKVKKVLCKFPQIRDQIYDEK+NLV IKV+CCNPEKLR
Sbjct: 1   MADAKKVVLMMLKVDLQCHRCYKKVKKVLCKFPQIRDQIYDEKQNLVTIKVVCCNPEKLR 60

Query: 61  DQIFCMGRGVITTIEIKPPEVPPPI---LDTQKPKQNAAQQNEQPPSGKK----EPVVGQ 120
           D+I C G GVI +I+I+ PE+P P+      QK   +   +N  PP  +K     PVV Q
Sbjct: 61  DKICCKGCGVIKSIQIQDPEIPKPVDPPPQLQKVIDSPLPKNPDPPPSQKVVDPPPVVVQ 120

Query: 121 NPPPVQ--PVSVNICVPVHGYPPPYPMDLCCRPCCEGQGGGPCSSKHGRPCPCPSEPERS 180
           NPPPVQ  PV  N CVP  GYP  YPM +CCR C EG+GGGPC                 
Sbjct: 121 NPPPVQTKPVPRNPCVPDAGYPRAYPMGVCCRECYEGRGGGPCY---------------- 180

Query: 181 VPCSREPERPCPCPSGHGRPGPCCDGCASGRPIPYCYGGGSAQCYVIP-----DQNAPGC 229
                         SG GRP  CCDGCASGRPI   YGGG + CY+ P     ++NA GC
Sbjct: 181 --------------SGVGRPRSCCDGCASGRPIYDSYGGGRS-CYISPCEYLNEENATGC 212

BLAST of Sed0022522 vs. NCBI nr
Match: KAG6573522.1 (hypothetical protein SDJN03_27409, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 207.2 bits (526), Expect = 1.5e-49
Identity = 131/276 (47.46%), Postives = 155/276 (56.16%), Query Frame = 0

Query: 1   MADT-KVVVMVIKAELQCDCCCKKVKKVLCKFPQIRDQIYDEKKNLVIIKVLCCNPEKLR 60
           MAD  KVV+M++K +LQC  C KKVKKV+CKFPQIRDQIYDEK+NLVIIKV+CCNPEKLR
Sbjct: 1   MADAKKVVIMILKVDLQCHRCYKKVKKVICKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60

Query: 61  DQIFCMGRGVITTIEIKPPEVPPP----------------ILDT---QKPKQNAAQQNEQ 120
           D+I C G GVI +I+I+ PE+P P                ++D+   +KP     Q+   
Sbjct: 61  DKICCKGCGVIKSIQIQDPEIPKPVDPPPPKKVDPPPPQKVIDSPPPKKPDPPPPQKVID 120

Query: 121 PPSGKK---------------------EPVVGQNPPPVQ--PVSVNICVPVHGYPPPYPM 180
           PP  KK                      PVV QNPPPVQ  PV  N CVPV GYPP YPM
Sbjct: 121 PPPPKKPDPPPPQKVVDPPAPPKKADPPPVVVQNPPPVQAKPVPRNTCVPVAGYPPAYPM 180

Query: 181 DLCCRPCCEGQGGGPCSSKHGRPCPCPSEPERSVPCSREPERPCPCPSGHGRPGPCCDGC 229
            +CCR C EG+GGGPC                               SG GRP  CC+GC
Sbjct: 181 GVCCRECYEGRGGGPCY------------------------------SGFGRPRSCCEGC 240

BLAST of Sed0022522 vs. NCBI nr
Match: XP_022967104.1 (protein PYRICULARIA ORYZAE RESISTANCE 21-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 203.8 bits (517), Expect = 1.6e-48
Identity = 130/263 (49.43%), Postives = 153/263 (58.17%), Query Frame = 0

Query: 1   MADT-KVVVMVIKAELQCDCCCKKVKKVLCKFPQIRDQIYDEKKNLVIIKVLCCNPEKLR 60
           MAD  KVV+M++K +LQC  C KKVKKVLCKFPQIRDQIYDEK+NLV IKV+CCNPEKLR
Sbjct: 1   MADAKKVVLMMLKVDLQCHRCYKKVKKVLCKFPQIRDQIYDEKQNLVTIKVVCCNPEKLR 60

Query: 61  DQIFCMGRGVITTIEIKPPEVPPP---------ILDTQKPKQ---NAAQQNEQPPSGKKE 120
           D+I C G GVI +I+I+ PE+P P         ++D+  PK      +Q+   PPS  K+
Sbjct: 61  DKICCKGCGVIKSIQIQDPEIPKPVDPPPQLQKVIDSPLPKNPDPPPSQKVVDPPSPLKK 120

Query: 121 ---------------PVVGQNPPPVQ--PVSVNICVPVHGYPPPYPMDLCCRPCCEGQGG 180
                          PVV QNPPPVQ  PV  N CVP  GYP  YPM +CCR C EG+GG
Sbjct: 121 ADPPPPTPPKKVDPPPVVVQNPPPVQTKPVPRNPCVPDAGYPRAYPMGVCCRECYEGRGG 180

Query: 181 GPCSSKHGRPCPCPSEPERSVPCSREPERPCPCPSGHGRPGPCCDGCASGRPIPYCYGGG 229
           GPC                               SG GRP  CCDGCASGRPI   YGGG
Sbjct: 181 GPCY------------------------------SGVGRPRSCCDGCASGRPIYDSYGGG 232

BLAST of Sed0022522 vs. NCBI nr
Match: XP_023542911.1 (leucine-rich repeat extensin-like protein 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 203.0 bits (515), Expect = 2.8e-48
Identity = 128/274 (46.72%), Postives = 149/274 (54.38%), Query Frame = 0

Query: 5   KVVVMVIKAELQCDCCCKKVKKVLCKFPQIRDQIYDEKKNLVIIKVLCCNPEKLRDQIFC 64
           KVV+M++K +LQC  C KKVKKVLCKFPQIRDQIYDEK+NLVIIKV+CCNPEKLRD+I C
Sbjct: 16  KVVLMMLKVDLQCHRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKICC 75

Query: 65  MGRGVITTIEIKPPEVPPPI-----------LDTQKPKQNAAQQNEQPPSGKK------- 124
            G GVI +I+I+ PE+P P+              +KP     Q+   PP  KK       
Sbjct: 76  KGCGVIKSIQIQDPEIPKPVDPPPPQKVTDSPPPKKPDPPPPQKVIDPPPPKKPDPPPPQ 135

Query: 125 -------------------------EPVVGQNPPPVQ--PVSVNICVPVHGYPPPYPMDL 184
                                     PVV QNPPPVQ  PV  N CVPV GYPP YPM +
Sbjct: 136 KVVDPPAPPKKADPPPPAPPKKVDPPPVVVQNPPPVQAKPVPRNTCVPVAGYPPAYPMGV 195

Query: 185 CCRPCCEGQGGGPCSSKHGRPCPCPSEPERSVPCSREPERPCPCPSGHGRPGPCCDGCAS 229
           CCR C EG+GGGPC                               SG GRP  CC+GCAS
Sbjct: 196 CCRECYEGRGGGPCY------------------------------SGFGRPRSCCEGCAS 255

BLAST of Sed0022522 vs. ExPASy Swiss-Prot
Match: A2XT03 (Protein PYRICULARIA ORYZAE RESISTANCE 21 OS=Oryza sativa subsp. indica OX=39946 GN=PI21 PE=4 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 2.0e-04
Identity = 74/286 (25.87%), Postives = 99/286 (34.62%), Query Frame = 0

Query: 8   VMVIKAELQCDCCCKKVKKVLCKFPQ---IRDQIYDEKKNLVIIKVLCCNPEKLRDQIFC 67
           ++VI  +LQC  C  K++KVL    +   I    YD K N VI++    +PEKL  +I+C
Sbjct: 3   ILVISVDLQCCRCDAKIRKVLGCLEEEYCIEKVEYDVKNNRVIVRGK-FDPEKLCKKIWC 62

Query: 68  MGRGVITTI---EIKPPEVPPPI---------------------LDTQKPKQNAAQQNEQ 127
               +I  I   ++ PP +PPP                       +  KPK       + 
Sbjct: 63  KAGKIIKEILIVDVWPPPLPPPCKPPPCEKPPEDCKPKPCHCCSCEKPKPKPKPCHCEKP 122

Query: 128 PPSGKKEPVVGQNPPPVQPVSVNICVP------------VHGYPPPYPM--DLCC----- 187
            P   ++P   + PPP +P       P             + YP PYP     CC     
Sbjct: 123 KPCHCEKPKPCEKPPPCKPEEPPKPPPEKPPPKPECKLVPYPYPVPYPYAGQWCCPKPEP 182

Query: 188 -----RPCCEGQGGGPCSSKHGRPCPCPSEPERSVPCSREPERPCPCPSGHGR------- 229
                 P  E +   PC   H   C C   P         P  PC C  GHG        
Sbjct: 183 PKPPPEPPKEPEPPKPCGCSHAFVCVCKPAP--------PPPPPCGCSGGHGNCGCGIRP 242

BLAST of Sed0022522 vs. ExPASy TrEMBL
Match: A0A6J1EBS4 (uncharacterized protein LOC111432597 OS=Cucurbita moschata OX=3662 GN=LOC111432597 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 6.5e-51
Identity = 126/246 (51.22%), Postives = 150/246 (60.98%), Query Frame = 0

Query: 5   KVVVMVIKAELQCDCCCKKVKKVLCKFPQIRDQIYDEKKNLVIIKVLCCNPEKLRDQIFC 64
           KVV MV+K +LQC  C KKVKKV+CKFPQIRDQIYDEK+NLVIIKV+CCNPEKLRD+I C
Sbjct: 6   KVVTMVLKVDLQCHRCYKKVKKVICKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKICC 65

Query: 65  MGRGVITTIEIKPPEVPPPILDTQKPKQ----NAAQQNEQPPSGKKE-----------PV 124
            G GVI +I+I+ PE+P P+ D  +PK+       +  + PP  K +           PV
Sbjct: 66  KGCGVIKSIQIQDPEIPKPV-DPPRPKKVDPPRPQKVIDSPPPKKPDPTSPQKVVDPPPV 125

Query: 125 VGQNPPPVQ--PVSVNICVPVHGYPPPYPMDLCCRPCCEGQGGGPCSSKHGRPCPCPSEP 184
           V QNPPPVQ  PV  N CVPV G+PP YPM +CCR C EG+GGGPC              
Sbjct: 126 VVQNPPPVQAKPVPRNTCVPVAGHPPAYPMGVCCRECYEGRGGGPCY------------- 185

Query: 185 ERSVPCSREPERPCPCPSGHGRPGPCCDGCASGRPIPYCYGGGSAQCYVIP-----DQNA 229
                            SG GRP  CC+GCASGRPI   YGGG + CY+ P     ++NA
Sbjct: 186 -----------------SGFGRPRSCCEGCASGRPIYDSYGGGRS-CYISPCEYLNEENA 219

BLAST of Sed0022522 vs. ExPASy TrEMBL
Match: A0A6J1HTH2 (protein PYRICULARIA ORYZAE RESISTANCE 21-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111466608 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 8.4e-51
Identity = 128/243 (52.67%), Postives = 149/243 (61.32%), Query Frame = 0

Query: 1   MADT-KVVVMVIKAELQCDCCCKKVKKVLCKFPQIRDQIYDEKKNLVIIKVLCCNPEKLR 60
           MAD  KVV+M++K +LQC  C KKVKKVLCKFPQIRDQIYDEK+NLV IKV+CCNPEKLR
Sbjct: 1   MADAKKVVLMMLKVDLQCHRCYKKVKKVLCKFPQIRDQIYDEKQNLVTIKVVCCNPEKLR 60

Query: 61  DQIFCMGRGVITTIEIKPPEVPPPI---LDTQKPKQNAAQQNEQPPSGKK----EPVVGQ 120
           D+I C G GVI +I+I+ PE+P P+      QK   +   +N  PP  +K     PVV Q
Sbjct: 61  DKICCKGCGVIKSIQIQDPEIPKPVDPPPQLQKVIDSPLPKNPDPPPSQKVVDPPPVVVQ 120

Query: 121 NPPPVQ--PVSVNICVPVHGYPPPYPMDLCCRPCCEGQGGGPCSSKHGRPCPCPSEPERS 180
           NPPPVQ  PV  N CVP  GYP  YPM +CCR C EG+GGGPC                 
Sbjct: 121 NPPPVQTKPVPRNPCVPDAGYPRAYPMGVCCRECYEGRGGGPCY---------------- 180

Query: 181 VPCSREPERPCPCPSGHGRPGPCCDGCASGRPIPYCYGGGSAQCYVIP-----DQNAPGC 229
                         SG GRP  CCDGCASGRPI   YGGG + CY+ P     ++NA GC
Sbjct: 181 --------------SGVGRPRSCCDGCASGRPIYDSYGGGRS-CYISPCEYLNEENATGC 212

BLAST of Sed0022522 vs. ExPASy TrEMBL
Match: A0A6J1HVT4 (protein PYRICULARIA ORYZAE RESISTANCE 21-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111466608 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 7.9e-49
Identity = 130/263 (49.43%), Postives = 153/263 (58.17%), Query Frame = 0

Query: 1   MADT-KVVVMVIKAELQCDCCCKKVKKVLCKFPQIRDQIYDEKKNLVIIKVLCCNPEKLR 60
           MAD  KVV+M++K +LQC  C KKVKKVLCKFPQIRDQIYDEK+NLV IKV+CCNPEKLR
Sbjct: 1   MADAKKVVLMMLKVDLQCHRCYKKVKKVLCKFPQIRDQIYDEKQNLVTIKVVCCNPEKLR 60

Query: 61  DQIFCMGRGVITTIEIKPPEVPPP---------ILDTQKPKQ---NAAQQNEQPPSGKKE 120
           D+I C G GVI +I+I+ PE+P P         ++D+  PK      +Q+   PPS  K+
Sbjct: 61  DKICCKGCGVIKSIQIQDPEIPKPVDPPPQLQKVIDSPLPKNPDPPPSQKVVDPPSPLKK 120

Query: 121 ---------------PVVGQNPPPVQ--PVSVNICVPVHGYPPPYPMDLCCRPCCEGQGG 180
                          PVV QNPPPVQ  PV  N CVP  GYP  YPM +CCR C EG+GG
Sbjct: 121 ADPPPPTPPKKVDPPPVVVQNPPPVQTKPVPRNPCVPDAGYPRAYPMGVCCRECYEGRGG 180

Query: 181 GPCSSKHGRPCPCPSEPERSVPCSREPERPCPCPSGHGRPGPCCDGCASGRPIPYCYGGG 229
           GPC                               SG GRP  CCDGCASGRPI   YGGG
Sbjct: 181 GPCY------------------------------SGVGRPRSCCDGCASGRPIYDSYGGG 232

BLAST of Sed0022522 vs. ExPASy TrEMBL
Match: A0A6J1ELG0 (leucine-rich repeat extensin-like protein 3 isoform X12 OS=Cucurbita moschata OX=3662 GN=LOC111434373 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 7.4e-47
Identity = 127/295 (43.05%), Postives = 146/295 (49.49%), Query Frame = 0

Query: 1   MADT-KVVVMVIKAELQCDCCCKKVKKVLCKFPQIRDQIYDEKKNLVIIKVLCCNPEKLR 60
           MAD  K VVM++K +LQCD C KKVKKVLCKFPQIRDQIYDEK+NLVIIKV+CCNPEKLR
Sbjct: 1   MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60

Query: 61  DQIFCMGRGVITTIEIKPPEVPPPILDTQKPKQNA-----AQQNEQPPSGKKEPVVGQNP 120
           D+I C G GVI +IEIKP + PPP      P + A     A+ +  PP     P    +P
Sbjct: 61  DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPPAKPDPPPPKKADPPPPKADP 120

Query: 121 PP---------------------------------------------------------V 180
           PP                                                          
Sbjct: 121 PPPKKADPPPPKADPPPPKKADPPPPKADPPPPKKADPPPAPKADPPPPKKVDPVPPAQP 180

Query: 181 QPVSVNICVPVHGYPPPYPMDLCCRPCCEGQGGGPCSSKHGRPCPCPSEPERSVPCSREP 229
           +P  VNICVPV GYPP YP+ +CC  C EGQGGGPC                        
Sbjct: 181 EPFPVNICVPVPGYPPAYPIGMCCSQCYEGQGGGPCY----------------------- 240

BLAST of Sed0022522 vs. ExPASy TrEMBL
Match: A0A6J1IAN1 (leucine-rich repeat extensin-like protein 3 isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111471668 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 3.7e-46
Identity = 127/302 (42.05%), Postives = 147/302 (48.68%), Query Frame = 0

Query: 1   MADT-KVVVMVIKAELQCDCCCKKVKKVLCKFPQIRDQIYDEKKNLVIIKVLCCNPEKLR 60
           MAD  KVVVM++K +LQCD C KKVKKVLCKFPQIRDQIYDEK+NLVIIKV+CCNPEKLR
Sbjct: 1   MADAKKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60

Query: 61  DQIFCMGRGVITTIEIKPPEVPPPILDTQKPKQNA----AQQNEQPPSGKKEPVVGQNPP 120
           D+I C G GVI +IEIKP + PPP      P + A    A+ +  PP     P    +PP
Sbjct: 61  DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPAKPDPPPPKKADPPPPKADPP 120

Query: 121 P----------------------------------------------------------- 180
           P                                                           
Sbjct: 121 PPKKADAPPPKKADPPPPKADPPPPKKADPPPPKADPPPPKKADPPPPAKADPPPPKKVD 180

Query: 181 ------VQPVSVNICVPVHGYPPPYPMDLCCRPCCEGQGGGPCSSKHGRPCPCPSEPERS 229
                  +P  VN+CVPV GYPP YP+ +CC  C EGQGGGPC                 
Sbjct: 181 PLPPAQPEPFPVNMCVPVPGYPPAYPIGMCCSQCYEGQGGGPCY---------------- 240

BLAST of Sed0022522 vs. TAIR 10
Match: AT4G16380.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 97.8 bits (242), Expect = 1.2e-20
Identity = 90/260 (34.62%), Postives = 119/260 (45.77%), Query Frame = 0

Query: 5   KVVVMVIKAELQCDCCCKKVKKVLCKFPQIRDQIYDEKKNLVIIKVLCCNPEKLRDQIFC 64
           KV +M +K +L C  C KKVKKVLCKFPQIRDQ++DEK N+VIIKV+CC+PE++ D++  
Sbjct: 8   KVTMMKLKVDLDCAKCYKKVKKVLCKFPQIRDQLFDEKSNIVIIKVVCCSPERIMDKLCS 67

Query: 65  MGRGVITTIEIKPPEVPP---PILDTQKPKQNAAQQNEQP--------PSGKKEPVVGQN 124
            G G I TIEI  P  PP   P    QKPK    +  E+P        P   KEP   + 
Sbjct: 68  KGGGSIKTIEIVEPPKPPQPQPQQPPQKPKDAQPKAPEKPKEPEKPKQPEKLKEPEKPKQ 127

Query: 125 P-PPVQPVSVNICVPVHGYPPPYPMDLCCRPCCEGQGGGPCSSKHGRPCPCPSE---PER 184
           P  P +P       P    P P P               P  +    P P P +   P +
Sbjct: 128 PEKPKEPEKTKQPAPA---PAPAP----------APAAKPAPAPAPAPAPAPKQPGPPPQ 187

Query: 185 SVPCSREPERPCPC-PSGHGRPGPCCDGCAS--------GRPIPYCYGGGS-------AQ 229
           ++P   + +    C P   G  GP  +G           GRP+   +GGG         Q
Sbjct: 188 AIPMMPQGQPAMCCGPYYDGYGGPAFNGYGMPPQPYECYGRPVYESWGGGCPPPPPAYRQ 247

BLAST of Sed0022522 vs. TAIR 10
Match: AT1G51090.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 77.8 bits (190), Expect = 1.3e-14
Identity = 65/176 (36.93%), Postives = 86/176 (48.86%), Query Frame = 0

Query: 5   KVVVMVIKAELQCDCCCKKVKKVLCKFPQIRDQIYDEKKNLVIIKVLCCNPEKLRDQIFC 64
           KVV+M +K +L C  C KKVKK + KFPQI D+++DEK N +IIKV+C +PE+L +++  
Sbjct: 4   KVVMMKLKVDLNCSKCYKKVKKAIRKFPQITDELFDEKSNTIIIKVVCYDPERLMNKLCY 63

Query: 65  MGRGVITTIEIKPPEVPPPILDTQKPKQNAAQQNEQPPSGKKEPVVGQNPPPVQPVSVNI 124
            G G I +I          IL+  KP Q   Q  ++P +    P   Q P  V+P  V +
Sbjct: 64  KGDGSIKSI---------VILEPPKPPQPQPQPPQKPTAPAPAPAQAQAPALVRPAPVPV 123

Query: 125 CVPVHGYPPPYPM--DLCCRPCCEGQG----GGPCSSKHGRPCPCPSEPERSVPCS 175
            V     P P PM     C P  E Q     G P     G    C  E   S  CS
Sbjct: 124 LVS-SSAPQPMPMWQPYHCGPYYEAQQYQCYGRPVYESWGGGRQCCHEDMNSQGCS 169

BLAST of Sed0022522 vs. TAIR 10
Match: AT4G16380.2 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 63.9 bits (154), Expect = 1.9e-10
Identity = 71/232 (30.60%), Postives = 98/232 (42.24%), Query Frame = 0

Query: 33  QIRDQIYDEKKNLVIIKVLCCNPEKLRDQIFCMGRGVITTIEIKPPEVPP---PILDTQK 92
           +IRDQ++DEK N+VIIKV+CC+PE++ D++   G G I TIEI  P  PP   P    QK
Sbjct: 15  EIRDQLFDEKSNIVIIKVVCCSPERIMDKLCSKGGGSIKTIEIVEPPKPPQPQPQQPPQK 74

Query: 93  PKQNAAQQNEQP--------PSGKKEPVVGQNP-PPVQPVSVNICVPVHGYPPPYPMDLC 152
           PK    +  E+P        P   KEP   + P  P +P       P    P P P    
Sbjct: 75  PKDAQPKAPEKPKEPEKPKQPEKLKEPEKPKQPEKPKEPEKTKQPAPA---PAPAP---- 134

Query: 153 CRPCCEGQGGGPCSSKHGRPCPCPSE---PERSVPCSREPERPCPC-PSGHGRPGPCCDG 212
                      P  +    P P P +   P +++P   + +    C P   G  GP  +G
Sbjct: 135 ------APAAKPAPAPAPAPAPAPKQPGPPPQAIPMMPQGQPAMCCGPYYDGYGGPAFNG 194

Query: 213 CAS--------GRPIPYCYGGGS-------AQCYV-----IPDQNAPGCSAM 229
                      GRP+   +GGG         QC+V       ++N   CS M
Sbjct: 195 YGMPPQPYECYGRPVYESWGGGCPPPPPAYRQCHVTRCDYFSEENPQSCSIM 233

BLAST of Sed0022522 vs. TAIR 10
Match: AT1G49420.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 61.6 bits (148), Expect = 9.3e-10
Identity = 69/225 (30.67%), Postives = 93/225 (41.33%), Query Frame = 0

Query: 5   KVVVMVIKAE-LQCDCCCKKVKKVLCKFPQIRDQIYDEKKNLVIIKVLCCNPEKLRDQIF 64
           KV  M +K E L  +    KVKK L   PQ+RDQ ++E+ N V IKV+CC+PEK+ D++ 
Sbjct: 8   KVTWMKLKTEPLSNEKNFSKVKKALSSIPQVRDQKFEEETNTVTIKVVCCSPEKVMDKLC 67

Query: 65  CMGRGVITTIEIKPPEVPPPILDTQKPKQNAAQQNEQPPSGKKEPVVGQNPPPVQPVSVN 124
             GRG I  IE     + P     QKPK+    +  + P   ++P     P    P S  
Sbjct: 68  SKGRGAIKLIE----TIDPAKHVAQKPKEPEKPKEAEKPKEPEKPKPAAAPAQGDPSSQR 127

Query: 125 ICVPVHGYPPPYPMDLCCRPCCEGQGGGPCSSKHGRPCPCPSEPERSVPCSREPERPCPC 184
           +    HGY PP  M                    G P          VP S  P      
Sbjct: 128 V---THGYNPPPMM--------------------GHP----------VPWSDGPNYGWSR 187

Query: 185 PSGHGRPGPCCDGCASGRPIPYCYGGGSAQCYVIPDQNAPGCSAM 229
           P+G+    P  +     +P P  YGG S       ++  P CS M
Sbjct: 188 PNGYDE-RPIYNSYGGWQPPPSQYGGRSHY-----EEEQPSCSIM 189

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022925304.11.3e-5051.22uncharacterized protein LOC111432597 [Cucurbita moschata][more]
XP_022967105.11.7e-5052.67protein PYRICULARIA ORYZAE RESISTANCE 21-like isoform X2 [Cucurbita maxima][more]
KAG6573522.11.5e-4947.46hypothetical protein SDJN03_27409, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022967104.11.6e-4849.43protein PYRICULARIA ORYZAE RESISTANCE 21-like isoform X1 [Cucurbita maxima][more]
XP_023542911.12.8e-4846.72leucine-rich repeat extensin-like protein 3 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
A2XT032.0e-0425.87Protein PYRICULARIA ORYZAE RESISTANCE 21 OS=Oryza sativa subsp. indica OX=39946 ... [more]
Match NameE-valueIdentityDescription
A0A6J1EBS46.5e-5151.22uncharacterized protein LOC111432597 OS=Cucurbita moschata OX=3662 GN=LOC1114325... [more]
A0A6J1HTH28.4e-5152.67protein PYRICULARIA ORYZAE RESISTANCE 21-like isoform X2 OS=Cucurbita maxima OX=... [more]
A0A6J1HVT47.9e-4949.43protein PYRICULARIA ORYZAE RESISTANCE 21-like isoform X1 OS=Cucurbita maxima OX=... [more]
A0A6J1ELG07.4e-4743.05leucine-rich repeat extensin-like protein 3 isoform X12 OS=Cucurbita moschata OX... [more]
A0A6J1IAN13.7e-4642.05leucine-rich repeat extensin-like protein 3 isoform X4 OS=Cucurbita maxima OX=36... [more]
Match NameE-valueIdentityDescription
AT4G16380.11.2e-2034.62Heavy metal transport/detoxification superfamily protein [more]
AT1G51090.11.3e-1436.93Heavy metal transport/detoxification superfamily protein [more]
AT4G16380.21.9e-1030.60Heavy metal transport/detoxification superfamily protein [more]
AT1G49420.19.3e-1030.67Heavy metal transport/detoxification superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 76..113
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..103
NoneNo IPR availablePANTHERPTHR47005HEAVY METAL TRANSPORT/DETOXIFICATION SUPERFAMILY PROTEINcoord: 4..228
NoneNo IPR availablePANTHERPTHR47005:SF5HEAVY METAL TRANSPORT/DETOXIFICATION SUPERFAMILY PROTEINcoord: 4..228
IPR036163Heavy metal-associated domain superfamilySUPERFAMILY55008HMA, heavy metal-associated domaincoord: 9..70

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0022522.1Sed0022522.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding