Sed0022480 (gene) Chayote v1

Overview


Name	Sed0022480
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Glutaredoxin
Location	LG11: 21290768 .. 21292266 (+)
RNA-Seq Expression	Sed0022480
Synteny	Sed0022480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCGAATTTGCAATTCTCCTAATTCCGCTATCTCTCTCTCTCTCTCTCTTTTTCTCCCAATTTTCCGGTGATGGATGGCGCATCTTCTTCTTGGCTATCCATGGAGGTGGATGAACCCTGTGACACTCGGATCCGGCGGCTCATAGCGGAGCATCCCGTGATCATATTCAGCCGCTCCTCTTGCAGCATGTGCCATGTCGTGAAGACCCTCCTCGCCACCATCGGAGTCCATCCCACCGTGATCGAGCTCGACCGCGTGGAAGAAATCGCCGCCGTTCCTTCCTCCTCCTTCGTTAGGGACAGTTCTGCCCCTGCGGTTTTCATCGGCGGCGCTTCCTTCGGCGGCTTCGAGACTCTCGTCGCTCTCCATCTTACAGGCCATCTCGTTCCTAAACTTGTTCAAGTTGGAGCTCTCCCGGTATCTATATATAATAAACACATGCCTCTCTCTATATCACATTTTCTTCTCATTTTGTTCTAACACTTTTAGGTTTTTTTTTTTTTTAATTATAATTTTTTAGTTTGATTCTCGAGTAGCTCGGAATTATGATTAGTTAGATCCGTTAGATAATTGTATATTGTTTTTTTCACTATTTTTCTACCATGAATTTCTATCTTCTAAGCTAAGATTTATATTCTCGGGTAGATTCAAATATATATATATACTTTTTTGGAATAAAAGAATTTTTTTTTTATAAACTTTAGCTAAGATTTTAAAAATATTAGTTTAGAATCGGTAACAGAAGAAAAAAAAAATCACAAATAGAAGTAGTACACATATGATCTTAATTTATAAACAAAACAAGGTTAATCTTTTCAATCCAGATATAGATCATCTACCAAGACATTAGTCACAATTTTAAGGTTGATGATTTGTCTACGCTCATAATTATTGAACTCAAGAACATGTATATTTTTTAGTGTTCAAATTTTCAAAATACTGAGACTAAATATTAGTTCCAAGTGTCTAGACAAGTGTTTGAAATTGACATTTGATGCTCTGAAATTCGAATTCAGTCTGATATATTTCTAATAATCTTGTTTTCAAGCATAATAAAATAAATTCGAAACAATGTCACTTTTTGTTTAGATATATACATTTTAAAACTAAAAATAGAAAAGAAACGTAATTTGTATTTTTCAATCAAGGAATCCAAAGGGATTCTCTTTTTTTCTTTTAACTAAATGAATTAAATTTTGTATTAAAGAAGGGAAAAATGATGTTGTGACGGTGCAGGTGGGACACGTGCGGTGTTGAAGGTCACTGGTGGGACTACTTTTGTATGATATTGCCAAATTCTCTGGTCGTCACCCTACAACGTGGGCATCGTTGTAGCCTAGAGATTCTCATTCCAATGGAACTCTTACTTTACTTGTAACATCTATTAAAACCTATTACAAAAATAAAATGAAATTGCAATATCTGAACTTGGTTTTCATTTATGTTACTTTTTTAGGGGCAAAATAACCGACCACCCATGTAATTTGGATTATCTAAC

mRNA sequence

CGCGAATTTGCAATTCTCCTAATTCCGCTATCTCTCTCTCTCTCTCTCTTTTTCTCCCAATTTTCCGGTGATGGATGGCGCATCTTCTTCTTGGCTATCCATGGAGGTGGATGAACCCTGTGACACTCGGATCCGGCGGCTCATAGCGGAGCATCCCGTGATCATATTCAGCCGCTCCTCTTGCAGCATGTGCCATGTCGTGAAGACCCTCCTCGCCACCATCGGAGTCCATCCCACCGTGATCGAGCTCGACCGCGTGGAAGAAATCGCCGCCGTTCCTTCCTCCTCCTTCGTTAGGGACAGTTCTGCCCCTGCGGTTTTCATCGGCGGCGCTTCCTTCGGCGGCTTCGAGACTCTCGTCGCTCTCCATCTTACAGGCCATCTCGTTCCTAAACTTGTTCAAGTTGGAGCTCTCCCGGTGGGACACGTGCGGTGTTGAAGGTCACTGGTGGGACTACTTTTGTATGATATTGCCAAATTCTCTGGTCGTCACCCTACAACGTGGGCATCGTTGTAGCCTAGAGATTCTCATTCCAATGGAACTCTTACTTTACTTGTAACATCTATTAAAACCTATTACAAAAATAAAATGAAATTGCAATATCTGAACTTGGTTTTCATTTATGTTACTTTTTTAGGGGCAAAATAACCGACCACCCATGTAATTTGGATTATCTAAC

Coding sequence (CDS)

ATGGATGGCGCATCTTCTTCTTGGCTATCCATGGAGGTGGATGAACCCTGTGACACTCGGATCCGGCGGCTCATAGCGGAGCATCCCGTGATCATATTCAGCCGCTCCTCTTGCAGCATGTGCCATGTCGTGAAGACCCTCCTCGCCACCATCGGAGTCCATCCCACCGTGATCGAGCTCGACCGCGTGGAAGAAATCGCCGCCGTTCCTTCCTCCTCCTTCGTTAGGGACAGTTCTGCCCCTGCGGTTTTCATCGGCGGCGCTTCCTTCGGCGGCTTCGAGACTCTCGTCGCTCTCCATCTTACAGGCCATCTCGTTCCTAAACTTGTTCAAGTTGGAGCTCTCCCGGTGGGACACGTGCGGTGTTGA

Protein sequence

MDGASSSWLSMEVDEPCDTRIRRLIAEHPVIIFSRSSCSMCHVVKTLLATIGVHPTVIELDRVEEIAAVPSSSFVRDSSAPAVFIGGASFGGFETLVALHLTGHLVPKLVQVGALPVGHVRC

Homology

[Close]

BLAST of Sed0022480 vs. NCBI nr
Match: XP_038885533.1 (glutaredoxin-C6-like isoform X1 [Benincasa hispida])

HSP 1 Score: 198.4 bits (503), Expect = 3.7e-47
Identity = 99/118 (83.90%), Postives = 111/118 (94.07%), Query Frame = 0


Query: 5   SSSWLSMEVDEPCDTRIRRLIAEHPVIIFSRSSCSMCHVVKTLLATIGVHPTVIELDRVE 64
           SSS LS++VDE  +TRIRRLIAEHPVIIFSR+SCSMCHV+KTLLA IGVHPTVIELD  +
Sbjct: 19  SSSSLSIDVDESSETRIRRLIAEHPVIIFSRTSCSMCHVMKTLLAIIGVHPTVIELDDHD 78

Query: 65  EIAAVPSSSFVRDSSAPAVFIGGASFGGFETLVALHLTGHLVPKLVQVGALPVGHVRC 123
           EIAAVPSSSFVRDSSAPAVFIGGASFGG E+LVALHL+GHL+PKL++VGALPVGHV+C
Sbjct: 79  EIAAVPSSSFVRDSSAPAVFIGGASFGGLESLVALHLSGHLIPKLIEVGALPVGHVQC 136

[Close]

BLAST of Sed0022480 vs. NCBI nr
Match: XP_008444458.1 (PREDICTED: glutaredoxin-C6-like isoform X2 [Cucumis melo])

HSP 1 Score: 197.2 bits (500), Expect = 8.2e-47
Identity = 99/118 (83.90%), Postives = 110/118 (93.22%), Query Frame = 0


Query: 5   SSSWLSMEVDEPCDTRIRRLIAEHPVIIFSRSSCSMCHVVKTLLATIGVHPTVIELDRVE 64
           SSS LS++VDE  +TRIRRLI EHPVIIFSRSSCSMCHV+KTLLA IGVHPTVIE+D  +
Sbjct: 19  SSSSLSIDVDESSETRIRRLITEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIEVDDHD 78

Query: 65  EIAAVPSSSFVRDSSAPAVFIGGASFGGFETLVALHLTGHLVPKLVQVGALPVGHVRC 123
           EIAAVPSSSFVRDSSAPAVFIGGASFGG E+LVALHL+GHLVPKL++VGALPVGHV+C
Sbjct: 79  EIAAVPSSSFVRDSSAPAVFIGGASFGGLESLVALHLSGHLVPKLIEVGALPVGHVQC 136

[Close]

BLAST of Sed0022480 vs. NCBI nr
Match: XP_004142929.1 (glutaredoxin-C6 [Cucumis sativus] >KGN62384.1 hypothetical protein Csa_018651 [Cucumis sativus])

HSP 1 Score: 196.1 bits (497), Expect = 1.8e-46
Identity = 98/118 (83.05%), Postives = 110/118 (93.22%), Query Frame = 0


Query: 5   SSSWLSMEVDEPCDTRIRRLIAEHPVIIFSRSSCSMCHVVKTLLATIGVHPTVIELDRVE 64
           SSS LS++VDE  +TRIRRLI +HPVIIFSRSSCSMCHV+KTLLA IGVHPTVIE+D  +
Sbjct: 19  SSSSLSIDVDESSETRIRRLITDHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIEVDDHD 78

Query: 65  EIAAVPSSSFVRDSSAPAVFIGGASFGGFETLVALHLTGHLVPKLVQVGALPVGHVRC 123
           EIAAVPSSSFVRDSSAPAVFIGGASFGG E+LVALHL+GHLVPKL++VGALPVGHV+C
Sbjct: 79  EIAAVPSSSFVRDSSAPAVFIGGASFGGLESLVALHLSGHLVPKLIEVGALPVGHVQC 136

[Close]

BLAST of Sed0022480 vs. NCBI nr
Match: XP_022997508.1 (glutaredoxin-C6-like [Cucurbita maxima])

HSP 1 Score: 193.0 bits (489), Expect = 1.5e-45
Identity = 98/118 (83.05%), Postives = 108/118 (91.53%), Query Frame = 0


Query: 5   SSSWLSMEVDEPCDTRIRRLIAEHPVIIFSRSSCSMCHVVKTLLATIGVHPTVIELDRVE 64
           SSS LS++VDE  + RIRRLI EHPVIIFSRSSCSMCHV+KTLLA IGVHPTVIEL+  +
Sbjct: 19  SSSSLSIDVDESSEARIRRLITEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELNDHD 78

Query: 65  EIAAVPSSSFVRDSSAPAVFIGGASFGGFETLVALHLTGHLVPKLVQVGALPVGHVRC 123
           EIAAVPSSSFVRDSSAPAVFIGGASFGG ETLVALHL+GHLVPKL++VGAL VGHV+C
Sbjct: 79  EIAAVPSSSFVRDSSAPAVFIGGASFGGLETLVALHLSGHLVPKLIEVGALAVGHVQC 136

[Close]

BLAST of Sed0022480 vs. NCBI nr
Match: XP_023546567.1 (glutaredoxin-C6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 193.0 bits (489), Expect = 1.5e-45
Identity = 98/118 (83.05%), Postives = 108/118 (91.53%), Query Frame = 0


Query: 5   SSSWLSMEVDEPCDTRIRRLIAEHPVIIFSRSSCSMCHVVKTLLATIGVHPTVIELDRVE 64
           SSS LS++VDE  + RIRRLI EHPVIIFSRSSCSMCHV+KTLLA IGVHPTVIEL+  +
Sbjct: 19  SSSSLSIDVDESSEARIRRLITEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELNDHD 78

Query: 65  EIAAVPSSSFVRDSSAPAVFIGGASFGGFETLVALHLTGHLVPKLVQVGALPVGHVRC 123
           EIAAVPSSSFVRDSSAPAVFIGGASFGG ETLVALHL+GHLVPKL++VGAL VGHV+C
Sbjct: 79  EIAAVPSSSFVRDSSAPAVFIGGASFGGLETLVALHLSGHLVPKLIEVGALTVGHVQC 136

[Close]

BLAST of Sed0022480 vs. ExPASy Swiss-Prot
Match: Q8L9S3 (Glutaredoxin-C6 OS=Arabidopsis thaliana OX=3702 GN=GRXC6 PE=2 SV=2)

HSP 1 Score: 124.0 bits (310), Expect = 1.2e-27
Identity = 71/118 (60.17%), Postives = 87/118 (73.73%), Query Frame = 0


Query: 5   SSSWLSMEVDEPCDTRIRRLIAEHPVIIFSRSSCSMCHVVKTLLATIGVHPTVIELDRVE 64
           SS+ LS++ +E  + +IRRLI+EHPVIIFSRSSC MCHV+K LLATIGV PTVIELD   
Sbjct: 26  SSTSLSIDEEESTEAKIRRLISEHPVIIFSRSSCCMCHVMKRLLATIGVIPTVIELDD-H 85

Query: 65  EIAAVPSSSFVRDSSA-------PAVFIGGASFGGFETLVALHLTGHLVPKLVQVGAL 116
           E++++P++     S         PAVFIG    GG E+LVALHL+G LVPKLVQVGAL
Sbjct: 86  EVSSLPTALQDEYSGGVSVVGPPPAVFIGRECVGGLESLVALHLSGQLVPKLVQVGAL 142

[Close]

BLAST of Sed0022480 vs. ExPASy Swiss-Prot
Match: Q29PZ1 (Glutaredoxin-C10 OS=Arabidopsis thaliana OX=3702 GN=GRXC10 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.7e-26
Identity = 62/112 (55.36%), Postives = 85/112 (75.89%), Query Frame = 0


Query: 5   SSSWLSMEVDEPCDTRIRRLIAEHPVIIFSR-SSCSMCHVVKTLLATIGVHPTVIELDRV 64
           +S+ LS + +E  +++I RLI+EHPVIIF+R SSC MCHV+K LL+T+GVHPTVIE+D  
Sbjct: 42  ASTSLSFDEEETSESKIGRLISEHPVIIFTRFSSCCMCHVMKKLLSTVGVHPTVIEIDDG 101

Query: 65  EEIAAVPSSSFVRDSSAPAVFIGGASFGGFETLVALHLTGHLVPKLVQVGAL 116
           E        +++   +AP +FIGG   GGFE+LVALHL+G L+P+LV+VGAL
Sbjct: 102 E-------IAYLAVEAAPVLFIGGTCVGGFESLVALHLSGQLIPRLVEVGAL 146

[Close]

BLAST of Sed0022480 vs. ExPASy Swiss-Prot
Match: Q0DK35 (Glutaredoxin-C7 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC7 PE=3 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.8e-20
Identity = 52/102 (50.98%), Postives = 71/102 (69.61%), Query Frame = 0


Query: 14  DEPCDTRIRRLIAEHPVIIFSRSSCSMCHVVKTLLATIGVHPTVIELDRVEEIAAVPSSS 73
           ++P + RI RL+ E PV+IF+R  C MCHV++ LLA +G H TVIELD   E AA   +S
Sbjct: 39  EQPAE-RIGRLVRESPVVIFARRGCCMCHVMRRLLAAVGAHATVIELDEAAEEAA---AS 98

Query: 74  FVRDSSAPAVFIGGASFGGFETLVALHLTGHLVPKLVQVGAL 116
               ++ PA+F+GGA  GG + L+ LHL+G LVP+L +VGAL
Sbjct: 99  AAAAAAVPALFVGGAPVGGLDGLMGLHLSGRLVPRLREVGAL 136

[Close]

BLAST of Sed0022480 vs. ExPASy Swiss-Prot
Match: Q5SMY5 (Monothiol glutaredoxin-S2 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS2 PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 2.0e-16
Identity = 49/107 (45.79%), Postives = 69/107 (64.49%), Query Frame = 0


Query: 12  EVDEPCDTRIRRLIAEHPVIIFSRSSCSMCHVVKTLLATIGVHPTVIELD---RVEEIAA 71
           E + P + R+ RL+ E PV++F+R  C M HV++ LLA +G H TVIEL+     EE AA
Sbjct: 23  EEEAPAE-RVGRLVRESPVVVFARRGCYMAHVMRRLLAAVGAHATVIELEGGAAEEEEAA 82

Query: 72  VPSSSFVRDSSAPAVFIGGASFGGFETLVALHLTGHLVPKLVQVGAL 116
           +        ++ PA+F+GG   GG E L+ LHL+G LVP+L +VGAL
Sbjct: 83  LGGG-----AALPALFVGGDPVGGLEGLMGLHLSGRLVPRLREVGAL 123

[Close]

BLAST of Sed0022480 vs. ExPASy Swiss-Prot
Match: Q7G8Y5 (Glutaredoxin-C1 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC1 PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.0e-15
Identity = 46/99 (46.46%), Postives = 62/99 (62.63%), Query Frame = 0


Query: 20  RIRRLIAEHPVIIFSRSSCSMCHVVKTLLATIGVHPTVIELD---RVEEIAAVPSSSFVR 79
           R+ RL A+  V+IFS SSC MCH V  L   +GV+PTV+ELD   R +E+    +    R
Sbjct: 3   RVNRLAAQRAVVIFSMSSCCMCHTVTRLFCELGVNPTVVELDEDPRGKEMEKALARLLGR 62

Query: 80  DSSAPAVFIGGASFGGFETLVALHLTGHLVPKLVQVGAL 116
             + PAVFIGG   G  + +++LHL+G+LVP L   GAL
Sbjct: 63  SPAVPAVFIGGRLVGSTDKVMSLHLSGNLVPLLRNAGAL 101

[Close]

BLAST of Sed0022480 vs. ExPASy TrEMBL
Match: A0A1S3BAG0 (glutaredoxin-C6-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487778 PE=3 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 4.0e-47
Identity = 99/118 (83.90%), Postives = 110/118 (93.22%), Query Frame = 0


Query: 5   SSSWLSMEVDEPCDTRIRRLIAEHPVIIFSRSSCSMCHVVKTLLATIGVHPTVIELDRVE 64
           SSS LS++VDE  +TRIRRLI EHPVIIFSRSSCSMCHV+KTLLA IGVHPTVIE+D  +
Sbjct: 19  SSSSLSIDVDESSETRIRRLITEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIEVDDHD 78

Query: 65  EIAAVPSSSFVRDSSAPAVFIGGASFGGFETLVALHLTGHLVPKLVQVGALPVGHVRC 123
           EIAAVPSSSFVRDSSAPAVFIGGASFGG E+LVALHL+GHLVPKL++VGALPVGHV+C
Sbjct: 79  EIAAVPSSSFVRDSSAPAVFIGGASFGGLESLVALHLSGHLVPKLIEVGALPVGHVQC 136

[Close]

BLAST of Sed0022480 vs. ExPASy TrEMBL
Match: A0A0A0LN11 (Glutaredoxin OS=Cucumis sativus OX=3659 GN=Csa_2G351650 PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 8.8e-47
Identity = 98/118 (83.05%), Postives = 110/118 (93.22%), Query Frame = 0


Query: 5   SSSWLSMEVDEPCDTRIRRLIAEHPVIIFSRSSCSMCHVVKTLLATIGVHPTVIELDRVE 64
           SSS LS++VDE  +TRIRRLI +HPVIIFSRSSCSMCHV+KTLLA IGVHPTVIE+D  +
Sbjct: 19  SSSSLSIDVDESSETRIRRLITDHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIEVDDHD 78

Query: 65  EIAAVPSSSFVRDSSAPAVFIGGASFGGFETLVALHLTGHLVPKLVQVGALPVGHVRC 123
           EIAAVPSSSFVRDSSAPAVFIGGASFGG E+LVALHL+GHLVPKL++VGALPVGHV+C
Sbjct: 79  EIAAVPSSSFVRDSSAPAVFIGGASFGGLESLVALHLSGHLVPKLIEVGALPVGHVQC 136

[Close]

BLAST of Sed0022480 vs. ExPASy TrEMBL
Match: A0A6J1KE42 (glutaredoxin-C6-like OS=Cucurbita maxima OX=3661 GN=LOC111492406 PE=3 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 7.5e-46
Identity = 98/118 (83.05%), Postives = 108/118 (91.53%), Query Frame = 0


Query: 5   SSSWLSMEVDEPCDTRIRRLIAEHPVIIFSRSSCSMCHVVKTLLATIGVHPTVIELDRVE 64
           SSS LS++VDE  + RIRRLI EHPVIIFSRSSCSMCHV+KTLLA IGVHPTVIEL+  +
Sbjct: 19  SSSSLSIDVDESSEARIRRLITEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELNDHD 78

Query: 65  EIAAVPSSSFVRDSSAPAVFIGGASFGGFETLVALHLTGHLVPKLVQVGALPVGHVRC 123
           EIAAVPSSSFVRDSSAPAVFIGGASFGG ETLVALHL+GHLVPKL++VGAL VGHV+C
Sbjct: 79  EIAAVPSSSFVRDSSAPAVFIGGASFGGLETLVALHLSGHLVPKLIEVGALAVGHVQC 136

[Close]

BLAST of Sed0022480 vs. ExPASy TrEMBL
Match: A0A6J1HEU7 (glutaredoxin-C6-like OS=Cucurbita moschata OX=3662 GN=LOC111462402 PE=3 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 9.7e-46
Identity = 97/118 (82.20%), Postives = 108/118 (91.53%), Query Frame = 0


Query: 5   SSSWLSMEVDEPCDTRIRRLIAEHPVIIFSRSSCSMCHVVKTLLATIGVHPTVIELDRVE 64
           SSS LS++VDE  + RIRRLI EHPVIIFSRSSCSMCHV+KTLLA IGVHPTVIEL+  +
Sbjct: 19  SSSSLSIDVDESSEARIRRLITEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELNDHD 78

Query: 65  EIAAVPSSSFVRDSSAPAVFIGGASFGGFETLVALHLTGHLVPKLVQVGALPVGHVRC 123
           EIAAVPSSSF+RDSSAPAVFIGGASFGG ETLVALHL+GHLVPKL++VGAL VGHV+C
Sbjct: 79  EIAAVPSSSFIRDSSAPAVFIGGASFGGLETLVALHLSGHLVPKLIEVGALTVGHVQC 136

[Close]

BLAST of Sed0022480 vs. ExPASy TrEMBL
Match: A0A5A7UYF1 (Glutaredoxin-C6-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001380 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 9.1e-44
Identity = 95/113 (84.07%), Postives = 105/113 (92.92%), Query Frame = 0


Query: 5   SSSWLSMEVDEPCDTRIRRLIAEHPVIIFSRSSCSMCHVVKTLLATIGVHPTVIELDRVE 64
           SSS LS++VDE  +TRIRRLI EHPVIIFSRSSCSMCHV+KTLLA IGVHPTVIE+D  +
Sbjct: 19  SSSSLSIDVDESSETRIRRLITEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIEVDDHD 78

Query: 65  EIAAVPSSSFVRDSSAPAVFIGGASFGGFETLVALHLTGHLVPKLVQVGALPV 118
           EIAAVPSSSFVRDSSAPAVFIGGASFGG E+LVALHL+GHLVPKL++VGALPV
Sbjct: 79  EIAAVPSSSFVRDSSAPAVFIGGASFGGLESLVALHLSGHLVPKLIEVGALPV 131

[Close]

BLAST of Sed0022480 vs. TAIR 10
Match: AT4G33040.1 (Thioredoxin superfamily protein )

HSP 1 Score: 124.0 bits (310), Expect = 8.2e-29
Identity = 71/118 (60.17%), Postives = 87/118 (73.73%), Query Frame = 0


Query: 5   SSSWLSMEVDEPCDTRIRRLIAEHPVIIFSRSSCSMCHVVKTLLATIGVHPTVIELDRVE 64
           SS+ LS++ +E  + +IRRLI+EHPVIIFSRSSC MCHV+K LLATIGV PTVIELD   
Sbjct: 26  SSTSLSIDEEESTEAKIRRLISEHPVIIFSRSSCCMCHVMKRLLATIGVIPTVIELDD-H 85

Query: 65  EIAAVPSSSFVRDSSA-------PAVFIGGASFGGFETLVALHLTGHLVPKLVQVGAL 116
           E++++P++     S         PAVFIG    GG E+LVALHL+G LVPKLVQVGAL
Sbjct: 86  EVSSLPTALQDEYSGGVSVVGPPPAVFIGRECVGGLESLVALHLSGQLVPKLVQVGAL 142

[Close]

BLAST of Sed0022480 vs. TAIR 10
Match: AT5G11930.1 (Thioredoxin superfamily protein )

HSP 1 Score: 119.0 bits (297), Expect = 2.6e-27
Identity = 62/112 (55.36%), Postives = 85/112 (75.89%), Query Frame = 0


Query: 5   SSSWLSMEVDEPCDTRIRRLIAEHPVIIFSR-SSCSMCHVVKTLLATIGVHPTVIELDRV 64
           +S+ LS + +E  +++I RLI+EHPVIIF+R SSC MCHV+K LL+T+GVHPTVIE+D  
Sbjct: 42  ASTSLSFDEEETSESKIGRLISEHPVIIFTRFSSCCMCHVMKKLLSTVGVHPTVIEIDDG 101

Query: 65  EEIAAVPSSSFVRDSSAPAVFIGGASFGGFETLVALHLTGHLVPKLVQVGAL 116
           E        +++   +AP +FIGG   GGFE+LVALHL+G L+P+LV+VGAL
Sbjct: 102 E-------IAYLAVEAAPVLFIGGTCVGGFESLVALHLSGQLIPRLVEVGAL 146

[Close]

BLAST of Sed0022480 vs. TAIR 10
Match: AT1G28480.1 (Thioredoxin superfamily protein )

HSP 1 Score: 80.1 bits (196), Expect = 1.4e-15
Identity = 42/102 (41.18%), Postives = 65/102 (63.73%), Query Frame = 0


Query: 20  RIRRLIAEHPVIIFSRSSCSMCHVVKTLLATIGVHPTVIELD--RVEEIAAVPSSSFVRD 79
           R+R ++ E+ VI+  R  C MCHVV+ LL  +GV+P V+E+D  R +E+ +   +  V+ 
Sbjct: 34  RVRMVVEENAVIVIGRRGCCMCHVVRRLLLGLGVNPAVLEIDEEREDEVLSELENIGVQG 93

Query: 80  SSA----PAVFIGGASFGGFETLVALHLTGHLVPKLVQVGAL 116
                  PAV++GG  FGG + ++A H++G LVP L +VGAL
Sbjct: 94  GGGTVKLPAVYVGGRLFGGLDRVMATHISGELVPILKEVGAL 135

[Close]

BLAST of Sed0022480 vs. TAIR 10
Match: AT5G18600.1 (Thioredoxin superfamily protein )

HSP 1 Score: 77.0 bits (188), Expect = 1.1e-14
Identity = 40/97 (41.24%), Postives = 56/97 (57.73%), Query Frame = 0


Query: 21  IRRLIAEHPVIIFSRSSCSMCHVVKTLLATIGVHPTVIELDRVEEIAAVPSSSFVRDSS- 80
           I +++ E PV+I+S+SSC M H +KTLL   G +P V ELD +     +  +      S 
Sbjct: 4   ITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIEQALLRLGCSP 63

Query: 81  -APAVFIGGASFGGFETLVALHLTGHLVPKLVQVGAL 116
             P VFIGG   GG   +++LHL G L+P L + GAL
Sbjct: 64  AVPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGAL 100

[Close]

BLAST of Sed0022480 vs. TAIR 10
Match: AT4G15680.1 (Thioredoxin superfamily protein )

HSP 1 Score: 75.1 bits (183), Expect = 4.4e-14
Identity = 39/98 (39.80%), Postives = 59/98 (60.20%), Query Frame = 0


Query: 20  RIRRLIAEHPVIIFSRSSCSMCHVVKTLLATIGVHPTVIELDRVEEIAAVPS--SSFVRD 79
           +++++I+E  V+IFS++SC M H +KTL    GV+PT+ ELD +     +    +     
Sbjct: 3   KLQKMISEKSVVIFSKNSCCMSHTIKTLFIDFGVNPTIYELDEINRGKEIEQALAQLGCS 62

Query: 80  SSAPAVFIGGASFGGFETLVALHLTGHLVPKLVQVGAL 116
            + P VFIGG   GG   +++LHL   LVP L +VGAL
Sbjct: 63  PTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRVGAL 100

The following BLAST results are available for this feature:

BLAST of Sed0022480 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885533.1	3.7e-47	83.90	glutaredoxin-C6-like isoform X1 [Benincasa hispida]	[more]
XP_008444458.1	8.2e-47	83.90	PREDICTED: glutaredoxin-C6-like isoform X2 [Cucumis melo]	[more]
XP_004142929.1	1.8e-46	83.05	glutaredoxin-C6 [Cucumis sativus] >KGN62384.1 hypothetical protein Csa_018651 [C...	[more]
XP_022997508.1	1.5e-45	83.05	glutaredoxin-C6-like [Cucurbita maxima]	[more]
XP_023546567.1	1.5e-45	83.05	glutaredoxin-C6-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0022480 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9S3	1.2e-27	60.17	Glutaredoxin-C6 OS=Arabidopsis thaliana OX=3702 GN=GRXC6 PE=2 SV=2	[more]
Q29PZ1	3.7e-26	55.36	Glutaredoxin-C10 OS=Arabidopsis thaliana OX=3702 GN=GRXC10 PE=2 SV=1	[more]
Q0DK35	1.8e-20	50.98	Glutaredoxin-C7 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC7 PE=3 SV=1	[more]
Q5SMY5	2.0e-16	45.79	Monothiol glutaredoxin-S2 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS2 PE=2...	[more]
Q7G8Y5	1.0e-15	46.46	Glutaredoxin-C1 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC1 PE=3 SV=1	[more]

BLAST of Sed0022480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BAG0	4.0e-47	83.90	glutaredoxin-C6-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487778 PE=3 SV=...	[more]
A0A0A0LN11	8.8e-47	83.05	Glutaredoxin OS=Cucumis sativus OX=3659 GN=Csa_2G351650 PE=3 SV=1	[more]
A0A6J1KE42	7.5e-46	83.05	glutaredoxin-C6-like OS=Cucurbita maxima OX=3661 GN=LOC111492406 PE=3 SV=1	[more]
A0A6J1HEU7	9.7e-46	82.20	glutaredoxin-C6-like OS=Cucurbita moschata OX=3662 GN=LOC111462402 PE=3 SV=1	[more]
A0A5A7UYF1	9.1e-44	84.07	Glutaredoxin-C6-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]

BLAST of Sed0022480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33040.1	8.2e-29	60.17	Thioredoxin superfamily protein	[more]
AT5G11930.1	2.6e-27	55.36	Thioredoxin superfamily protein	[more]
AT1G28480.1	1.4e-15	41.18	Thioredoxin superfamily protein	[more]
AT5G18600.1	1.1e-14	41.24	Thioredoxin superfamily protein	[more]
AT4G15680.1	4.4e-14	39.80	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014025	Glutaredoxin subgroup	PRINTS	PR00160	GLUTAREDOXIN	coord: 87..100 score: 31.85 coord: 30..48 score: 35.75 coord: 73..86 score: 26.19
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 11..116 e-value: 3.7E-23 score: 83.3
None	No IPR available	PANTHER	PTHR10168:SF56	GLUTAREDOXIN-C6	coord: 5..115
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 18..116 score: 17.698761
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 29..108 e-value: 2.73896E-25 score: 89.136
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 30..87 e-value: 5.7E-8 score: 32.9
IPR011905	Glutaredoxin-like, plant II	TIGRFAM	TIGR02189	TIGR02189	coord: 21..115 e-value: 3.9E-32 score: 108.2
IPR011905	Glutaredoxin-like, plant II	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 5..115
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 20..114

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0022480.1	Sed0022480.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0097573	glutathione oxidoreductase activity