Sed0021859 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TGACACCTCTCTCCACTCTTCCCATTTCACATTCTTTTTCATCTAAATAATATTACCAAAAAATAAATTTTAAAAAAAACCCCAAAATTTCAAATCCCCTGTTTTTCTCTTGAAACCCAAAATGGAATTGAGTTTTTTAAGGCGCTTCTGCGGCGGTTCCGGGTACGTGAAAAGAGGGCACTACCCGGTGGCGGTGGCTGTTCTGGGGCGGCGGTCGCCGGAGAAGAGGGCGGCGCGTTGGAGAGCGCTGTGGCGGCGGCTGAAGAAGATCGGAATGTTGAGCAGCTGCGGTGGGCCACGTGAGGCGCACGTGCCGTACAATCCACAGACTTATTTGCAGAACTTCGATGAAGGTTCTGTGATGGTGATCGGAGATGATCTGGACGCCGTTTCTCGATCTTTCTCGGCCCGGTTCGCCATTTTTCAACGGCCGGCTCAGTTTGTGGTTCATAAAGTTAATGTTTAG TGACACCTCTCTCCACTCTTCCCATTTCACATTCTTTTTCATCTAAATAATATTACCAAAAAATAAATTTTAAAAAAAACCCCAAAATTTCAAATCCCCTGTTTTTCTCTTGAAACCCAAAATGGAATTGAGTTTTTTAAGGCGCTTCTGCGGCGGTTCCGGGTACGTGAAAAGAGGGCACTACCCGGTGGCGGTGGCTGTTCTGGGGCGGCGGTCGCCGGAGAAGAGGGCGGCGCGTTGGAGAGCGCTGTGGCGGCGGCTGAAGAAGATCGGAATGTTGAGCAGCTGCGGTGGGCCACGTGAGGCGCACGTGCCGTACAATCCACAGACTTATTTGCAGAACTTCGATGAAGGTTCTGTGATGGTGATCGGAGATGATCTGGACGCCGTTTCTCGATCTTTCTCGGCCCGGTTCGCCATTTTTCAACGGCCGGCTCAGTTTGTGGTTCATAAAGTTAATGTTTAG ATGGAATTGAGTTTTTTAAGGCGCTTCTGCGGCGGTTCCGGGTACGTGAAAAGAGGGCACTACCCGGTGGCGGTGGCTGTTCTGGGGCGGCGGTCGCCGGAGAAGAGGGCGGCGCGTTGGAGAGCGCTGTGGCGGCGGCTGAAGAAGATCGGAATGTTGAGCAGCTGCGGTGGGCCACGTGAGGCGCACGTGCCGTACAATCCACAGACTTATTTGCAGAACTTCGATGAAGGTTCTGTGATGGTGATCGGAGATGATCTGGACGCCGTTTCTCGATCTTTCTCGGCCCGGTTCGCCATTTTTCAACGGCCGGCTCAGTTTGTGGTTCATAAAGTTAATGTTTAG MELSFLRRFCGGSGYVKRGHYPVAVAVLGRRSPEKRAARWRALWRRLKKIGMLSSCGGPREAHVPYNPQTYLQNFDEGSVMVIGDDLDAVSRSFSARFAIFQRPAQFVVHKVNV Homology
BLAST of Sed0021859 vs. NCBI nr
Match: KAG6606769.1 (hypothetical protein SDJN03_00111, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 119.8 bits (299), Expect = 1.5e-23 Identity = 72/124 (58.06%), Postives = 85/124 (68.55%), Query Frame = 0
BLAST of Sed0021859 vs. NCBI nr
Match: KAG7036482.1 (hypothetical protein SDJN02_00099, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 119.4 bits (298), Expect = 2.0e-23 Identity = 72/122 (59.02%), Postives = 84/122 (68.85%), Query Frame = 0
BLAST of Sed0021859 vs. NCBI nr
Match: GAY51209.1 (hypothetical protein CUMW_132530 [Citrus unshiu]) HSP 1 Score: 71.6 bits (174), Expect = 4.8e-09 Identity = 44/105 (41.90%), Postives = 56/105 (53.33%), Query Frame = 0
BLAST of Sed0021859 vs. NCBI nr
Match: KDO51221.1 (hypothetical protein CISIN_1g044132mg [Citrus sinensis]) HSP 1 Score: 70.5 bits (171), Expect = 1.1e-08 Identity = 44/105 (41.90%), Postives = 55/105 (52.38%), Query Frame = 0
BLAST of Sed0021859 vs. NCBI nr
Match: ESR40256.1 (hypothetical protein CICLE_v10026796mg [Citrus clementina]) HSP 1 Score: 70.1 bits (170), Expect = 1.4e-08 Identity = 43/105 (40.95%), Postives = 55/105 (52.38%), Query Frame = 0
BLAST of Sed0021859 vs. ExPASy TrEMBL
Match: A0A2H5PFR9 (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_132530 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 2.3e-09 Identity = 44/105 (41.90%), Postives = 56/105 (53.33%), Query Frame = 0
BLAST of Sed0021859 vs. ExPASy TrEMBL
Match: A0A067EJZ4 (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g044132mg PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 5.2e-09 Identity = 44/105 (41.90%), Postives = 55/105 (52.38%), Query Frame = 0
BLAST of Sed0021859 vs. ExPASy TrEMBL
Match: V4ST02 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10026796mg PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 6.8e-09 Identity = 43/105 (40.95%), Postives = 55/105 (52.38%), Query Frame = 0
BLAST of Sed0021859 vs. ExPASy TrEMBL
Match: A0A5C7IIL3 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_004028 PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 9.8e-08 Identity = 42/103 (40.78%), Postives = 51/103 (49.51%), Query Frame = 0
BLAST of Sed0021859 vs. ExPASy TrEMBL
Match: M0U645 (Uncharacterized protein OS=Musa acuminata subsp. malaccensis OX=214687 PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 9.8e-08 Identity = 37/65 (56.92%), Postives = 44/65 (67.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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