Sed0020664 (gene) Chayote v1

Overview


Name	Sed0020664
Type	gene
Organism	Sechium edule (Chayote v1)
Description	cyclin-dependent protein kinase inhibitor SMR6-like
Location	LG03: 748399 .. 749059 (-)
RNA-Seq Expression	Sed0020664
Synteny	Sed0020664

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACAAAATTCCCTTTTCTCTTCCATTTTTTACTTCAAAGCCCCCTTTTCTCATTTTCCTCTGTTTTCTTCGAATAAACCCTCTGTTTTTTTTCCCTTCAAAATCCCTCTTTTGTTGGTTGTTTTTTTTACATTTCATGTTTGGATTTCAAATGGGGTTTTCCAAAAAGTCCCAAATCGACGGCGGATTTGAAGCAGAGAGCAAAAAATGGGTAATCGCCGGCTTGCCGGCGAGGTCGTCGTTGAAGCCAATCAACACGAAATCGAAGGTCAAAGACGGCGGCGATGACGGCGGCGACAGGTCGTGTTCGACGACGCCGACAGCGAAGGAAGCGAGATTACCGGCGAAACTCAGCTGCCCGCCGGCGCCGAGGAAGCGGAGATCGGAAAAATCAAGCTCAAATCAAAATCACCTTAGGGAGTTTTTCAATCCACCGGATTTAGAATCTGTCTTCAAACTCCGAGTTTAAAAAGCCCAATTGGGTTTGTAATAGCTGAGAATTTAGGGGTTTCAAATTTTACTATGTGGTTTTAGTTTTGTGCTTGTTTAAATTTTCTCTGTTTAGGACTATAATATATATACTTTTCTAATGTTATTGGTAGTTCTTAGTAGTAAGATGAAGATGTTGTATAAAAGATTTGATATTTGTTATCTAAATGGGT

mRNA sequence

CACAAAATTCCCTTTTCTCTTCCATTTTTTACTTCAAAGCCCCCTTTTCTCATTTTCCTCTGTTTTCTTCGAATAAACCCTCTGTTTTTTTTCCCTTCAAAATCCCTCTTTTGTTGGTTGTTTTTTTTACATTTCATGTTTGGATTTCAAATGGGGTTTTCCAAAAAGTCCCAAATCGACGGCGGATTTGAAGCAGAGAGCAAAAAATGGGTAATCGCCGGCTTGCCGGCGAGGTCGTCGTTGAAGCCAATCAACACGAAATCGAAGGTCAAAGACGGCGGCGATGACGGCGGCGACAGGTCGTGTTCGACGACGCCGACAGCGAAGGAAGCGAGATTACCGGCGAAACTCAGCTGCCCGCCGGCGCCGAGGAAGCGGAGATCGGAAAAATCAAGCTCAAATCAAAATCACCTTAGGGAGTTTTTCAATCCACCGGATTTAGAATCTGTCTTCAAACTCCGAGTTTAAAAAGCCCAATTGGGTTTGTAATAGCTGAGAATTTAGGGGTTTCAAATTTTACTATGTGGTTTTAGTTTTGTGCTTGTTTAAATTTTCTCTGTTTAGGACTATAATATATATACTTTTCTAATGTTATTGGTAGTTCTTAGTAGTAAGATGAAGATGTTGTATAAAAGATTTGATATTTGTTATCTAAATGGGT

Coding sequence (CDS)

ATGTTTGGATTTCAAATGGGGTTTTCCAAAAAGTCCCAAATCGACGGCGGATTTGAAGCAGAGAGCAAAAAATGGGTAATCGCCGGCTTGCCGGCGAGGTCGTCGTTGAAGCCAATCAACACGAAATCGAAGGTCAAAGACGGCGGCGATGACGGCGGCGACAGGTCGTGTTCGACGACGCCGACAGCGAAGGAAGCGAGATTACCGGCGAAACTCAGCTGCCCGCCGGCGCCGAGGAAGCGGAGATCGGAAAAATCAAGCTCAAATCAAAATCACCTTAGGGAGTTTTTCAATCCACCGGATTTAGAATCTGTCTTCAAACTCCGAGTTTAA

Protein sequence

MFGFQMGFSKKSQIDGGFEAESKKWVIAGLPARSSLKPINTKSKVKDGGDDGGDRSCSTTPTAKEARLPAKLSCPPAPRKRRSEKSSSNQNHLREFFNPPDLESVFKLRV

Homology

[Close]

BLAST of Sed0020664 vs. NCBI nr
Match: XP_022991036.1 (cyclin-dependent protein kinase inhibitor SMR6-like [Cucurbita maxima])

HSP 1 Score: 184.9 bits (468), Expect = 3.8e-43
Identity = 94/110 (85.45%), Postives = 98/110 (89.09%), Query Frame = 0


Query: 1   MFGFQMGFSKKSQIDGGFEAESKKWVIAGLPARSSLKPINTKSKVKDGGDDGGDRSCSTT 60
           MFGFQMGFS KSQIDGGFEAE+KKWVIAG PARSSLK INTK KVKD GDD G+RSCSTT
Sbjct: 1   MFGFQMGFSNKSQIDGGFEAETKKWVIAGFPARSSLKQINTKPKVKD-GDDDGERSCSTT 60

Query: 61  PTAKEARLPAKLSCPPAPRKRRSEKSSSNQNHLREFFNPPDLESVFKLRV 111
           PTAKEAR+P KLSCPPAPRKRRS K SSNQNH+REFF P DLESVFKL V
Sbjct: 61  PTAKEARIPEKLSCPPAPRKRRSRKLSSNQNHVREFFQPSDLESVFKLLV 109

[Close]

BLAST of Sed0020664 vs. NCBI nr
Match: KAG7033096.1 (Cyclin-dependent protein kinase inhibitor SMR6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 179.1 bits (453), Expect = 2.1e-41
Identity = 92/105 (87.62%), Postives = 95/105 (90.48%), Query Frame = 0


Query: 6   MGFSKKSQIDGGFEAESKKWVIAGLPARSSLKPINTKSKVKDGGDDGGDRSCSTTPTAKE 65
           MGFSKKSQIDGGFEAESKKWVIAGLPARSSLK INTK KVKD GDD G+RSCSTTPTAKE
Sbjct: 1   MGFSKKSQIDGGFEAESKKWVIAGLPARSSLKQINTKPKVKD-GDDDGERSCSTTPTAKE 60

Query: 66  ARLPAKLSCPPAPRKRRSEKSSSNQNHLREFFNPPDLESVFKLRV 111
           AR+P KLSCPPAPRKRRS K SSNQNH+REFF P DLESVFKL V
Sbjct: 61  ARIPEKLSCPPAPRKRRSRKLSSNQNHVREFFQPSDLESVFKLLV 104

[Close]

BLAST of Sed0020664 vs. NCBI nr
Match: KAG6602418.1 (Cyclin-dependent protein kinase inhibitor SMR6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 176.8 bits (447), Expect = 1.0e-40
Identity = 91/105 (86.67%), Postives = 94/105 (89.52%), Query Frame = 0


Query: 6   MGFSKKSQIDGGFEAESKKWVIAGLPARSSLKPINTKSKVKDGGDDGGDRSCSTTPTAKE 65
           MGFSKKSQIDGGFEAESKKWVIAGLPARSSLK INTK KVKD  DD G+RSCSTTPTAKE
Sbjct: 1   MGFSKKSQIDGGFEAESKKWVIAGLPARSSLKQINTKPKVKD-SDDDGERSCSTTPTAKE 60

Query: 66  ARLPAKLSCPPAPRKRRSEKSSSNQNHLREFFNPPDLESVFKLRV 111
           AR+P KLSCPPAPRKRRS K SSNQNH+REFF P DLESVFKL V
Sbjct: 61  ARIPEKLSCPPAPRKRRSRKLSSNQNHVREFFQPSDLESVFKLLV 104

[Close]

BLAST of Sed0020664 vs. NCBI nr
Match: XP_023550994.1 (cyclin-dependent protein kinase inhibitor SMR6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 173.3 bits (438), Expect = 1.1e-39
Identity = 89/105 (84.76%), Postives = 94/105 (89.52%), Query Frame = 0


Query: 6   MGFSKKSQIDGGFEAESKKWVIAGLPARSSLKPINTKSKVKDGGDDGGDRSCSTTPTAKE 65
           MGFSKKSQIDGGFE E KKWVIAGLPARSSLKPI TKS+ KD GDD G++S STTPTAKE
Sbjct: 1   MGFSKKSQIDGGFEPEGKKWVIAGLPARSSLKPITTKSRAKD-GDDDGEKSRSTTPTAKE 60

Query: 66  ARLPAKLSCPPAPRKRRSEKSSSNQNHLREFFNPPDLESVFKLRV 111
           AR+P KLSCP APRKRRS KSSSNQNH REFFNPPDLESVFK+RV
Sbjct: 61  ARIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV 104

[Close]

BLAST of Sed0020664 vs. NCBI nr
Match: KAG7016206.1 (Cyclin-dependent protein kinase inhibitor SMR6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 172.9 bits (437), Expect = 1.5e-39
Identity = 89/105 (84.76%), Postives = 94/105 (89.52%), Query Frame = 0


Query: 6   MGFSKKSQIDGGFEAESKKWVIAGLPARSSLKPINTKSKVKDGGDDGGDRSCSTTPTAKE 65
           MGFSKKSQIDGGFE E KKWVIAGLPARSSLKPI TKS+ KDG DD G++S STTPTAKE
Sbjct: 1   MGFSKKSQIDGGFEPEGKKWVIAGLPARSSLKPITTKSRAKDGEDD-GEKSRSTTPTAKE 60

Query: 66  ARLPAKLSCPPAPRKRRSEKSSSNQNHLREFFNPPDLESVFKLRV 111
           AR+P KLSCP APRKRRS KSSSNQNH REFFNPPDLESVFK+RV
Sbjct: 61  ARIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV 104

[Close]

BLAST of Sed0020664 vs. ExPASy Swiss-Prot
Match: Q29Q81 (Cyclin-dependent protein kinase inhibitor SMR6 OS=Arabidopsis thaliana OX=3702 GN=SMR6 PE=1 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 6.5e-22
Identity = 60/112 (53.57%), Postives = 74/112 (66.07%), Query Frame = 0


Query: 6   MGFSKKSQIDGGFEAESKKWVIAGLPARSSLKPINTKSK-----VKDGGDD--GGDRSCS 65
           MGFSKKSQ +GG E++ KKWVIAG+  R+SLKP+ TK +     V +  +D    +  CS
Sbjct: 1   MGFSKKSQFEGGLESDGKKWVIAGISIRASLKPVKTKLRAPPEIVTEVEEDCYNEEEECS 60

Query: 66  TTPTAKEARLPAKLSCPPAPRKRRSEKSSSNQNHLREFFNPP-DLESVFKLR 110
           TTPTAKE ++P  L CPPAPRKRR        N +REFF PP DLE+VF  R
Sbjct: 61  TTPTAKETKIPELLECPPAPRKRR-PALKCRSNVVREFFTPPSDLETVFLRR 111

[Close]

BLAST of Sed0020664 vs. ExPASy Swiss-Prot
Match: Q9SAD3 (Cyclin-dependent protein kinase inhibitor SMR8 OS=Arabidopsis thaliana OX=3702 GN=SMR8 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.5e-13
Identity = 47/105 (44.76%), Postives = 61/105 (58.10%), Query Frame = 0


Query: 6   MGFSKK--SQIDGGF--EAESKKWVIAGLPARSSLKPINTKSKVKDGGDDGGDRSCSTTP 65
           MG+S K   Q+DG      + KKWVIAG+P+RS LK IN    V     +  D+ C TTP
Sbjct: 1   MGYSGKPHHQLDGEIRESTDGKKWVIAGIPSRSPLKQINLSPGVTVTETEEQDQ-CPTTP 60

Query: 66  TAKEARLPAKLSCPPAPRKRRSEKSSSNQNHLREFFNPPDLESVF 107
           TA   R+P    CP AP+KR+     S     R++F+PPDLE+VF
Sbjct: 61  TAVSVRIPRVPPCPAAPKKRKPSLKCSYVTVTRDYFSPPDLETVF 104

[Close]

BLAST of Sed0020664 vs. ExPASy Swiss-Prot
Match: Q1G3Y4 (Cyclin-dependent protein kinase inhibitor SMR15 OS=Arabidopsis thaliana OX=3702 GN=SMR15 PE=3 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.1e-12
Identity = 48/108 (44.44%), Postives = 61/108 (56.48%), Query Frame = 0


Query: 6   MGFSKKS--QIDGGFE--AESKKWVIAGLPARSSLKPINTKSKVKDGGDDGGDRSCSTTP 65
           MGFS K+  Q D  F    E KK VI G+   S++KPI+  S      +D  +  C TTP
Sbjct: 1   MGFSGKTYHQFDRKFSETTEGKKCVITGISLHSTVKPISLSSSAVSNTED--EDLCPTTP 60

Query: 66  TAKEARLPAKLSCPPAPRKRRSEKSSSNQNHLREFFNPPDLESVFKLR 110
           TA   R+P  + CPPAP+KR+     S     REFF+PPDLE+VF  R
Sbjct: 61  TADSVRIPTVIPCPPAPKKRKLTLKVSYGP--REFFSPPDLETVFIYR 104

[Close]

BLAST of Sed0020664 vs. ExPASy Swiss-Prot
Match: Q9LVX6 (Cyclin-dependent protein kinase inhibitor SMR7 OS=Arabidopsis thaliana OX=3702 GN=SMR7 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.4e-08
Identity = 40/102 (39.22%), Postives = 52/102 (50.98%), Query Frame = 0


Query: 6   MGFSKKSQIDGGFEAESKKWVIAGLPARSSLKPINTK-SKVKDGGDDGGDRSCSTTPTAK 65
           MG SKKSQ+    + + KK++ A    R+SLKP+ TK  K +   +DG       TPTA+
Sbjct: 1   MGISKKSQVSRELDTDGKKFIFAKTSIRASLKPVKTKLIKPERESEDG----ICITPTAR 60

Query: 66  EARLPAKLSCPPAPRKRRSEKSSSNQNHLREFFNPPDLESVF 107
            A+ P    CP APRKR       N   +  F  P D E VF
Sbjct: 61  GAKTP---ECPAAPRKRPPVLKCQNNIRIEYFVPPSDFELVF 95

[Close]

BLAST of Sed0020664 vs. ExPASy Swiss-Prot
Match: F4IWB3 (Cyclin-dependent protein kinase inhibitor SMR13 OS=Arabidopsis thaliana OX=3702 GN=SMR13 PE=4 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 6.1e-04
Identity = 21/47 (44.68%), Postives = 31/47 (65.96%), Query Frame = 0


Query: 60  TPTAKEARLPAKLSCPPAPRKRRSEKSSSNQNHLREFFNPPDLESVF 107
           TP AK++R+P  L+CPPAP+K+R  K+   +     FF PP++E  F
Sbjct: 56  TPKAKKSRIPEMLTCPPAPKKQRVSKNCVLRRRQIVFFAPPEIELFF 102

[Close]

BLAST of Sed0020664 vs. ExPASy TrEMBL
Match: A0A6J1JPL5 (cyclin-dependent protein kinase inhibitor SMR6-like OS=Cucurbita maxima OX=3661 GN=LOC111487749 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.8e-43
Identity = 94/110 (85.45%), Postives = 98/110 (89.09%), Query Frame = 0


Query: 1   MFGFQMGFSKKSQIDGGFEAESKKWVIAGLPARSSLKPINTKSKVKDGGDDGGDRSCSTT 60
           MFGFQMGFS KSQIDGGFEAE+KKWVIAG PARSSLK INTK KVKD GDD G+RSCSTT
Sbjct: 1   MFGFQMGFSNKSQIDGGFEAETKKWVIAGFPARSSLKQINTKPKVKD-GDDDGERSCSTT 60

Query: 61  PTAKEARLPAKLSCPPAPRKRRSEKSSSNQNHLREFFNPPDLESVFKLRV 111
           PTAKEAR+P KLSCPPAPRKRRS K SSNQNH+REFF P DLESVFKL V
Sbjct: 61  PTAKEARIPEKLSCPPAPRKRRSRKLSSNQNHVREFFQPSDLESVFKLLV 109

[Close]

BLAST of Sed0020664 vs. ExPASy TrEMBL
Match: A0A6J1JVL3 (cyclin-dependent protein kinase inhibitor SMR6-like OS=Cucurbita maxima OX=3661 GN=LOC111489273 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 8.0e-39
Identity = 88/105 (83.81%), Postives = 94/105 (89.52%), Query Frame = 0


Query: 6   MGFSKKSQIDGGFEAESKKWVIAGLPARSSLKPINTKSKVKDGGDDGGDRSCSTTPTAKE 65
           MGFSKKSQIDGG EAE KKWVIAGLPARSSLKPI+TKS+ KDG DD  ++S STTPTAKE
Sbjct: 1   MGFSKKSQIDGGLEAEGKKWVIAGLPARSSLKPISTKSRAKDGEDD-CEKSRSTTPTAKE 60

Query: 66  ARLPAKLSCPPAPRKRRSEKSSSNQNHLREFFNPPDLESVFKLRV 111
           AR+P KLSCP APRKRRS KSSSNQNH REFFNPPDLESVFK+RV
Sbjct: 61  ARIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV 104

[Close]

BLAST of Sed0020664 vs. ExPASy TrEMBL
Match: A0A6J1FHD8 (cyclin-dependent protein kinase inhibitor SMR6 OS=Cucurbita moschata OX=3662 GN=LOC111445393 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.4e-38
Identity = 87/105 (82.86%), Postives = 92/105 (87.62%), Query Frame = 0


Query: 6   MGFSKKSQIDGGFEAESKKWVIAGLPARSSLKPINTKSKVKDGGDDGGDRSCSTTPTAKE 65
           MGFSKKSQIDGGFE E KKWVIAGLPARSSLKPI TK + KDG DD G++S STTPTAKE
Sbjct: 1   MGFSKKSQIDGGFEPEGKKWVIAGLPARSSLKPITTKPRAKDGEDD-GEKSHSTTPTAKE 60

Query: 66  ARLPAKLSCPPAPRKRRSEKSSSNQNHLREFFNPPDLESVFKLRV 111
           AR+P KL CP APRKRRS KSSSNQNH REFFNPPDLESVFK+RV
Sbjct: 61  ARIPEKLICPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV 104

[Close]

BLAST of Sed0020664 vs. ExPASy TrEMBL
Match: A0A5D3BY33 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00180 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.2e-37
Identity = 85/105 (80.95%), Postives = 89/105 (84.76%), Query Frame = 0


Query: 6   MGFSKKSQIDGGFEAESKKWVIAGLPARSSLKPINTKSKVKDGGDDGGDRSCSTTPTAKE 65
           MGFSKKSQID GFEAE KKWVIAGL ARSSLKPINTKSK K+G +DG       TPT KE
Sbjct: 1   MGFSKKSQIDSGFEAEQKKWVIAGLSARSSLKPINTKSKTKEGEEDG-----EKTPTGKE 60

Query: 66  ARLPAKLSCPPAPRKRRSEKSSSNQNHLREFFNPPDLESVFKLRV 111
           AR+P KL CPPAPRKRRS KSSSNQNH+REFFNPPDLESVFKLRV
Sbjct: 61  ARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV 100

[Close]

BLAST of Sed0020664 vs. ExPASy TrEMBL
Match: A0A1S3C883 (uncharacterized protein LOC103498100 OS=Cucumis melo OX=3656 GN=LOC103498100 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.2e-37
Identity = 85/105 (80.95%), Postives = 89/105 (84.76%), Query Frame = 0


Query: 6   MGFSKKSQIDGGFEAESKKWVIAGLPARSSLKPINTKSKVKDGGDDGGDRSCSTTPTAKE 65
           MGFSKKSQID GFEAE KKWVIAGL ARSSLKPINTKSK K+G +DG       TPT KE
Sbjct: 1   MGFSKKSQIDSGFEAEQKKWVIAGLSARSSLKPINTKSKTKEGEEDG-----EKTPTGKE 60

Query: 66  ARLPAKLSCPPAPRKRRSEKSSSNQNHLREFFNPPDLESVFKLRV 111
           AR+P KL CPPAPRKRRS KSSSNQNH+REFFNPPDLESVFKLRV
Sbjct: 61  ARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV 100

[Close]

BLAST of Sed0020664 vs. TAIR 10
Match: AT5G40460.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27630.1); Has 87 Blast hits to 87 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 104.8 bits (260), Expect = 4.6e-23
Identity = 60/112 (53.57%), Postives = 74/112 (66.07%), Query Frame = 0


Query: 6   MGFSKKSQIDGGFEAESKKWVIAGLPARSSLKPINTKSK-----VKDGGDD--GGDRSCS 65
           MGFSKKSQ +GG E++ KKWVIAG+  R+SLKP+ TK +     V +  +D    +  CS
Sbjct: 1   MGFSKKSQFEGGLESDGKKWVIAGISIRASLKPVKTKLRAPPEIVTEVEEDCYNEEEECS 60

Query: 66  TTPTAKEARLPAKLSCPPAPRKRRSEKSSSNQNHLREFFNPP-DLESVFKLR 110
           TTPTAKE ++P  L CPPAPRKRR        N +REFF PP DLE+VF  R
Sbjct: 61  TTPTAKETKIPELLECPPAPRKRR-PALKCRSNVVREFFTPPSDLETVFLRR 111

[Close]

BLAST of Sed0020664 vs. TAIR 10
Match: AT1G10690.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G60783.1); Has 59 Blast hits to 59 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 77.0 bits (188), Expect = 1.0e-14
Identity = 47/105 (44.76%), Postives = 61/105 (58.10%), Query Frame = 0


Query: 6   MGFSKK--SQIDGGF--EAESKKWVIAGLPARSSLKPINTKSKVKDGGDDGGDRSCSTTP 65
           MG+S K   Q+DG      + KKWVIAG+P+RS LK IN    V     +  D+ C TTP
Sbjct: 1   MGYSGKPHHQLDGEIRESTDGKKWVIAGIPSRSPLKQINLSPGVTVTETEEQDQ-CPTTP 60

Query: 66  TAKEARLPAKLSCPPAPRKRRSEKSSSNQNHLREFFNPPDLESVF 107
           TA   R+P    CP AP+KR+     S     R++F+PPDLE+VF
Sbjct: 61  TAVSVRIPRVPPCPAAPKKRKPSLKCSYVTVTRDYFSPPDLETVF 104

[Close]

BLAST of Sed0020664 vs. TAIR 10
Match: AT1G60783.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 73.2 bits (178), Expect = 1.5e-13
Identity = 48/108 (44.44%), Postives = 61/108 (56.48%), Query Frame = 0


Query: 6   MGFSKKS--QIDGGFE--AESKKWVIAGLPARSSLKPINTKSKVKDGGDDGGDRSCSTTP 65
           MGFS K+  Q D  F    E KK VI G+   S++KPI+  S      +D  +  C TTP
Sbjct: 1   MGFSGKTYHQFDRKFSETTEGKKCVITGISLHSTVKPISLSSSAVSNTED--EDLCPTTP 60

Query: 66  TAKEARLPAKLSCPPAPRKRRSEKSSSNQNHLREFFNPPDLESVFKLR 110
           TA   R+P  + CPPAP+KR+     S     REFF+PPDLE+VF  R
Sbjct: 61  TADSVRIPTVIPCPPAPKKRKLTLKVSYGP--REFFSPPDLETVFIYR 104

[Close]

BLAST of Sed0020664 vs. TAIR 10
Match: AT3G27630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40460.1); Has 36 Blast hits to 36 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 59.7 bits (143), Expect = 1.7e-09
Identity = 40/102 (39.22%), Postives = 52/102 (50.98%), Query Frame = 0


Query: 6   MGFSKKSQIDGGFEAESKKWVIAGLPARSSLKPINTK-SKVKDGGDDGGDRSCSTTPTAK 65
           MG SKKSQ+    + + KK++ A    R+SLKP+ TK  K +   +DG       TPTA+
Sbjct: 1   MGISKKSQVSRELDTDGKKFIFAKTSIRASLKPVKTKLIKPERESEDG----ICITPTAR 60

Query: 66  EARLPAKLSCPPAPRKRRSEKSSSNQNHLREFFNPPDLESVF 107
            A+ P    CP APRKR       N   +  F  P D E VF
Sbjct: 61  GAKTP---ECPAAPRKRPPVLKCQNNIRIEYFVPPSDFELVF 95

[Close]

BLAST of Sed0020664 vs. TAIR 10
Match: AT3G20898.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G51355.1); Has 66 Blast hits to 66 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.1 bits (105), Expect = 4.4e-05
Identity = 21/47 (44.68%), Postives = 31/47 (65.96%), Query Frame = 0


Query: 60  TPTAKEARLPAKLSCPPAPRKRRSEKSSSNQNHLREFFNPPDLESVF 107
           TP AK++R+P  L+CPPAP+K+R  K+   +     FF PP++E  F
Sbjct: 56  TPKAKKSRIPEMLTCPPAPKKQRVSKNCVLRRRQIVFFAPPEIELFF 102

The following BLAST results are available for this feature:

BLAST of Sed0020664 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022991036.1	3.8e-43	85.45	cyclin-dependent protein kinase inhibitor SMR6-like [Cucurbita maxima]	[more]
KAG7033096.1	2.1e-41	87.62	Cyclin-dependent protein kinase inhibitor SMR6, partial [Cucurbita argyrosperma ...	[more]
KAG6602418.1	1.0e-40	86.67	Cyclin-dependent protein kinase inhibitor SMR6, partial [Cucurbita argyrosperma ...	[more]
XP_023550994.1	1.1e-39	84.76	cyclin-dependent protein kinase inhibitor SMR6 [Cucurbita pepo subsp. pepo]	[more]
KAG7016206.1	1.5e-39	84.76	Cyclin-dependent protein kinase inhibitor SMR6, partial [Cucurbita argyrosperma ...	[more]

BLAST of Sed0020664 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q29Q81	6.5e-22	53.57	Cyclin-dependent protein kinase inhibitor SMR6 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9SAD3	1.5e-13	44.76	Cyclin-dependent protein kinase inhibitor SMR8 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q1G3Y4	2.1e-12	44.44	Cyclin-dependent protein kinase inhibitor SMR15 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LVX6	2.4e-08	39.22	Cyclin-dependent protein kinase inhibitor SMR7 OS=Arabidopsis thaliana OX=3702 G...	[more]
F4IWB3	6.1e-04	44.68	Cyclin-dependent protein kinase inhibitor SMR13 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Sed0020664 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JPL5	1.8e-43	85.45	cyclin-dependent protein kinase inhibitor SMR6-like OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1JVL3	8.0e-39	83.81	cyclin-dependent protein kinase inhibitor SMR6-like OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1FHD8	1.4e-38	82.86	cyclin-dependent protein kinase inhibitor SMR6 OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A5D3BY33	1.2e-37	80.95	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C883	1.2e-37	80.95	uncharacterized protein LOC103498100 OS=Cucumis melo OX=3656 GN=LOC103498100 PE=...	[more]

BLAST of Sed0020664 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G40460.1	4.6e-23	53.57	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G10690.1	1.0e-14	44.76	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G60783.1	1.5e-13	44.44	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G27630.1	1.7e-09	39.22	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G20898.1	4.4e-05	44.68	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..96
None	No IPR available	PANTHER	PTHR33142:SF40	CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR6-RELATED	coord: 6..109
IPR040389	Cyclin-dependent protein kinase inhibitor SMR	PANTHER	PTHR33142	CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR13	coord: 6..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0020664.1	Sed0020664.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045839	negative regulation of mitotic nuclear division
biological_process	GO:0032875	regulation of DNA endoreduplication
cellular_component	GO:0005634	nucleus