Sed0019113 (gene) Chayote v1

Overview
NameSed0019113
Typegene
OrganismSechium edule (Chayote v1)
Descriptionethylene-responsive transcription factor 4-like
LocationLG14: 23169674 .. 23170551 (-)
RNA-Seq ExpressionSed0019113
SyntenySed0019113
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATAAAACCCCCCACCTCTCCTCGCCATCCCCATTTCCTCGTCATCGGAATCAATGACGCCGAGAGACATCGCCGTCGCCGTCAAGCAAGACGACGGCGAAATGCACTTTAGAGGAGTGAGAAAGCGGCCGTGGGGGAGATACGCGGCGGAGATCAGAGATCCCTGCAAGAAGAGCCGCGTTTGGCTCGGCACCTTCGACACGGCGGAGGAGGCGGCCCGAGCCTACGACGCCGCCGCCAGAGAGTTCCGCGGCGCCAAGGCCAAGACCAATTTCCCTGTGCCTTCGCCCAATCACCAGAGCCCTACCCACAGTAGCACCGTCGAGTCATCGAGCCGGGACCAACCTCCGATCGTCGATTCCTCGCCGTTGAACCTCGCCGCCGCCGCCGTTGGATCCATCGGTTACAACAGTTTTCATTTACGCCGCTTCCAATTTCCCCTCATTGGAGACGTTTTTGCTCCGCCGTCCATTCTGTATTTCGATCCTCGTCTTCAGAATCAACGGCTACGATTCGAACCTCGCCGCGAGTGTGGCGGCGGCGGCGTGGATTTCGATCTGAACTTTCCTCCTCCGGAATCCGCCTGAATTTTTTGTCCTTGCGAATCTCGCAGGATTGGCTGTGATTTATGATAAATTAGGTATTTTTTTGTTAATGATAATAATTTAAATAAAAAATATTACGAGTGGAGGAGAAGATTATACGATTGTTCATAGGAAAAATCTGATCTCCTCATTTTTTGCAGCACAGAAAAAACCGAAACGAGTTTTCTTGCTGTGTTATGTTTTTTTTTTCTTCTTTTATTATTATTATTATTTTTATATTACAACAATTGGGGTGGGAGAGACTCGAATCTAAGACCTCAAGGTGTATATCGA

mRNA sequence

TATAAAACCCCCCACCTCTCCTCGCCATCCCCATTTCCTCGTCATCGGAATCAATGACGCCGAGAGACATCGCCGTCGCCGTCAAGCAAGACGACGGCGAAATGCACTTTAGAGGAGTGAGAAAGCGGCCGTGGGGGAGATACGCGGCGGAGATCAGAGATCCCTGCAAGAAGAGCCGCGTTTGGCTCGGCACCTTCGACACGGCGGAGGAGGCGGCCCGAGCCTACGACGCCGCCGCCAGAGAGTTCCGCGGCGCCAAGGCCAAGACCAATTTCCCTGTGCCTTCGCCCAATCACCAGAGCCCTACCCACAGTAGCACCGTCGAGTCATCGAGCCGGGACCAACCTCCGATCGTCGATTCCTCGCCGTTGAACCTCGCCGCCGCCGCCGTTGGATCCATCGGTTACAACAGTTTTCATTTACGCCGCTTCCAATTTCCCCTCATTGGAGACGTTTTTGCTCCGCCGTCCATTCTGTATTTCGATCCTCGTCTTCAGAATCAACGGCTACGATTCGAACCTCGCCGCGAGTGTGGCGGCGGCGGCGTGGATTTCGATCTGAACTTTCCTCCTCCGGAATCCGCCTGAATTTTTTGTCCTTGCGAATCTCGCAGGATTGGCTGTGATTTATGATAAATTAGGTATTTTTTTGTTAATGATAATAATTTAAATAAAAAATATTACGAGTGGAGGAGAAGATTATACGATTGTTCATAGGAAAAATCTGATCTCCTCATTTTTTGCAGCACAGAAAAAACCGAAACGAGTTTTCTTGCTGTGTTATGTTTTTTTTTTCTTCTTTTATTATTATTATTATTTTTATATTACAACAATTGGGGTGGGAGAGACTCGAATCTAAGACCTCAAGGTGTATATCGA

Coding sequence (CDS)

ATGACGCCGAGAGACATCGCCGTCGCCGTCAAGCAAGACGACGGCGAAATGCACTTTAGAGGAGTGAGAAAGCGGCCGTGGGGGAGATACGCGGCGGAGATCAGAGATCCCTGCAAGAAGAGCCGCGTTTGGCTCGGCACCTTCGACACGGCGGAGGAGGCGGCCCGAGCCTACGACGCCGCCGCCAGAGAGTTCCGCGGCGCCAAGGCCAAGACCAATTTCCCTGTGCCTTCGCCCAATCACCAGAGCCCTACCCACAGTAGCACCGTCGAGTCATCGAGCCGGGACCAACCTCCGATCGTCGATTCCTCGCCGTTGAACCTCGCCGCCGCCGCCGTTGGATCCATCGGTTACAACAGTTTTCATTTACGCCGCTTCCAATTTCCCCTCATTGGAGACGTTTTTGCTCCGCCGTCCATTCTGTATTTCGATCCTCGTCTTCAGAATCAACGGCTACGATTCGAACCTCGCCGCGAGTGTGGCGGCGGCGGCGTGGATTTCGATCTGAACTTTCCTCCTCCGGAATCCGCCTGA

Protein sequence

MTPRDIAVAVKQDDGEMHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARAYDAAAREFRGAKAKTNFPVPSPNHQSPTHSSTVESSSRDQPPIVDSSPLNLAAAAVGSIGYNSFHLRRFQFPLIGDVFAPPSILYFDPRLQNQRLRFEPRRECGGGGVDFDLNFPPPESA
Homology
[Close]
BLAST of Sed0019113 vs. NCBI nr
Match: XP_022978752.1 (ethylene-responsive transcription factor 4-like [Cucurbita maxima])

HSP 1 Score: 215.3 bits (547), Expect = 4.2e-52
Identity = 131/247 (53.04%), Postives = 150/247 (60.73%), Query Frame = 0 

Query: 1   MTPRDIAVAVKQDDG---EMHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60
           M PR+ AVAVK + G   E+HFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA
Sbjct: 1   MAPREKAVAVKANVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60

Query: 61  YDAAAREFRGAKAKTNFPVPS------------PNHQSPTHSSTVESSSRDQPPIVDSSP 120
           YD AAREFRG KAKTNFP+PS             N+QSP+ SSTVESSSR+QP +VDSSP
Sbjct: 61  YDKAAREFRGVKAKTNFPMPSYDLLNLNNKINISNNQSPSQSSTVESSSREQPLMVDSSP 120

Query: 121 LNL----AAAAVGSIGYNSFHLRRFQFPLIGDVFA---PPS--ILYFDPRLQ-------- 178
           LNL        + S G  +F  +R+Q P+IG+VF+   PPS  +LYFD  L+        
Sbjct: 121 LNLNLGHGMPGLTSTGAVTFPFQRYQIPMIGEVFSRGIPPSNHVLYFDAALRAGMIKTHP 180

[Close]
BLAST of Sed0019113 vs. NCBI nr
Match: XP_023545040.1 (ethylene-responsive transcription factor 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 214.5 bits (545), Expect = 7.2e-52
Identity = 131/248 (52.82%), Postives = 151/248 (60.89%), Query Frame = 0 

Query: 1   MTPRDIAVAVKQDDG---EMHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60
           M PR+ AVAVK + G   E+HFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA
Sbjct: 1   MAPREKAVAVKANVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60

Query: 61  YDAAAREFRGAKAKTNFPVPSP-------------NHQSPTHSSTVESSSRDQPPIVDSS 120
           YD AAREFRG KAKTNFP+PS              N+QSP+ SSTVESSSR+QP +VDSS
Sbjct: 61  YDKAAREFRGVKAKTNFPLPSDDLLNLNNKINNINNNQSPSQSSTVESSSREQPLMVDSS 120

Query: 121 PLNLAAA----AVGSIGYNSFHLRRFQFPLIGDVFA---PPS--ILYFDPRLQ------- 178
           PLNL  A     + + G  +F  +R+Q P+IG+VF+   PPS  +LYFD  L+       
Sbjct: 121 PLNLNLAHGMPGLTAAGAVTFPFQRYQIPMIGEVFSRGIPPSNHVLYFDAALRAGMIKTH 180

[Close]
BLAST of Sed0019113 vs. NCBI nr
Match: XP_022925660.1 (ethylene-responsive transcription factor 4-like [Cucurbita moschata] >KAG7034605.1 Ethylene-responsive transcription factor 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 214.2 bits (544), Expect = 9.4e-52
Identity = 133/249 (53.41%), Postives = 152/249 (61.04%), Query Frame = 0 

Query: 1   MTPRDIAVAVKQDDG---EMHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60
           M PR+ AVAVK + G   E+HFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA
Sbjct: 1   MAPREKAVAVKANVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60

Query: 61  YDAAAREFRGAKAKTNFPVPSP-------------NHQSPTHSSTVESSSRDQPPIVDSS 120
           YD AAREFRG KAKTNFP+PS              N+QSP+ SSTVESSSR+QP +VDSS
Sbjct: 61  YDKAAREFRGVKAKTNFPLPSDDLLNLNNKINNINNNQSPSQSSTVESSSREQPLMVDSS 120

Query: 121 PLNLAAA----AVGSIGYNSFHLRRFQFPLIGDVFA---PPS--ILYFDPRLQ------- 178
           PLNL  A     + + G  +F  +R+Q P+IG+VF+   PPS  +LYFD  L+       
Sbjct: 121 PLNLNLAHGMPGLTAAGAVTFPFQRYQIPMIGEVFSRGIPPSNHVLYFDAALRAGMIKTH 180

[Close]
BLAST of Sed0019113 vs. NCBI nr
Match: KAG6604462.1 (Ethylene-responsive transcription factor 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 213.4 bits (542), Expect = 1.6e-51
Identity = 130/248 (52.42%), Postives = 150/248 (60.48%), Query Frame = 0 

Query: 1   MTPRDIAVAVKQDDG---EMHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60
           M PR+ AVAVK + G   E+HFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA
Sbjct: 1   MAPREKAVAVKANVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60

Query: 61  YDAAAREFRGAKAKTNFPVPSP-------------NHQSPTHSSTVESSSRDQPPIVDSS 120
           YD AAREFRG KAKTNFP+PS              N+QSP+ SSTVESSSR+QP +VDSS
Sbjct: 61  YDKAAREFRGVKAKTNFPLPSDDLLNLNNKINNINNNQSPSQSSTVESSSREQPLMVDSS 120

Query: 121 PLNL----AAAAVGSIGYNSFHLRRFQFPLIGDVFA---PPS--ILYFDPRLQ------- 178
           PLNL        + + G  +F  +R+Q P+IG+VF+   PPS  +LYFD  L+       
Sbjct: 121 PLNLNLSHGMPGLTAAGAVTFPFQRYQIPMIGEVFSRGIPPSNHVLYFDAALRAGMIKTH 180

[Close]
BLAST of Sed0019113 vs. NCBI nr
Match: XP_038883348.1 (ethylene-responsive transcription factor 4-like [Benincasa hispida])

HSP 1 Score: 212.6 bits (540), Expect = 2.7e-51
Identity = 130/250 (52.00%), Postives = 148/250 (59.20%), Query Frame = 0 

Query: 1   MTPRDIAVAVKQDDG---EMHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60
           M PR+ A+AVK + G   ++HFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA
Sbjct: 1   MAPREKAIAVKPNVGNVKDVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60

Query: 61  YDAAAREFRGAKAKTNFPVPSP--------------NHQSPTHSSTVESSSRDQPPIVDS 120
           YD AAREFRG KAKTNFP+PS               N+QSP+ SSTVESSSR+Q  +VDS
Sbjct: 61  YDNAAREFRGVKAKTNFPLPSDDQLLNLNKKINNINNNQSPSQSSTVESSSREQALMVDS 120

Query: 121 SPLNL----AAAAVGSIGYNSFHLRRFQFPLIGDVFA----PPS--ILYFD--------- 178
           SPLNL        + + G  SF  +RFQ P+IG+VF     PPS  +LYFD         
Sbjct: 121 SPLNLNLGHGIGGLTTAGPISFPFQRFQIPVIGEVFTRGGIPPSNHVLYFDAALRAGMIK 180

[Close]
BLAST of Sed0019113 vs. ExPASy Swiss-Prot
Match: Q40477 (Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum OX=4097 GN=ERF4 PE=1 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.0e-33
Identity = 95/207 (45.89%), Postives = 111/207 (53.62%), Query Frame = 0 

Query: 16  EMHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARAYDAAAREFRGAKAKTNFP 75
           E+H+RGVRKRPWGRYAAEIRDP KKSRVWLGTFDTAEEAA+AYD AAREFRG KAKTNFP
Sbjct: 24  EVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNFP 83

Query: 76  VPSPNHQSPTHSSTVESSSRDQ----PPIVDSSPLNL-------AAAA--------VGSI 135
            P+ N QSP+HSSTVESSS +     PP    +PL L       + AA         G +
Sbjct: 84  SPTEN-QSPSHSSTVESSSGENGVHAPP---HAPLELDLTRRLGSVAADGGDNCRRSGEV 143

Query: 136 GYNSFHLRRFQFPLIGDVFAPPSILYFD-----------------------------PRL 175
           GY  FH    Q P +  +     +L FD                             P +
Sbjct: 144 GYPIFH----QQPTVAVLPNGQPVLLFDSLWRAGVVNRPQPYHVTPMGFNGVNAGVGPTV 203

[Close]
BLAST of Sed0019113 vs. ExPASy Swiss-Prot
Match: Q9LW49 (Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris OX=4096 GN=ERF4 PE=2 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 5.9e-33
Identity = 95/205 (46.34%), Postives = 112/205 (54.63%), Query Frame = 0 

Query: 16  EMHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARAYDAAAREFRGAKAKTNFP 75
           E+H+RGVRKRPWGRYAAEIRDP KKSRVWLGTFDTAEEAA+AYD AAREFRG KAKTNFP
Sbjct: 24  EVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNFP 83

Query: 76  VPSPNHQSPTHSSTVESSSRD----QPPIVDSSPLNL-------AAAA--------VGSI 135
           +PS N QS +HSST+ESSS +     PP    +PL L       + AA         G +
Sbjct: 84  LPSEN-QSTSHSSTMESSSGETGIHAPP---HAPLELDLTRRLGSVAADGGDNCRRSGEV 143

Query: 136 GYNSFH-------LRRFQFPLIGDVFAPPSILY--------------------FDPRLQN 175
           GY  FH       L   Q  L+ D    P ++                      DP + +
Sbjct: 144 GYPIFHQQPTVAVLPNGQPVLLFDSLWRPGVVNRPQPYHVMPMAMGFNGVNAGVDPTVSD 203

[Close]
BLAST of Sed0019113 vs. ExPASy Swiss-Prot
Match: Q9C5I3 (Ethylene-responsive transcription factor 11 OS=Arabidopsis thaliana OX=3702 GN=ERF11 PE=1 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.9e-31
Identity = 92/188 (48.94%), Postives = 108/188 (57.45%), Query Frame = 0 

Query: 1   MTPRDIAVAVKQDDGE-MHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARAYD 60
           M P     AVK ++G  + +RGVRKRPWGRYAAEIRDP KKSRVWLGTFDT EEAARAYD
Sbjct: 1   MAPTVKTAAVKTNEGNGVRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYD 60

Query: 61  AAAREFRGAKAKTNFPVPSPN------HQSPTHSSTVESSSRDQPPIVDSSPLNLAAAAV 120
             A EFRGAKAKTNFP  + N       QS + SSTVESS  +         LNL + +V
Sbjct: 61  KRAIEFRGAKAKTNFPCYNINAHCLSLTQSLSQSSTVESSFPN---------LNLGSDSV 120

Query: 121 GSIGYNSFHLRRFQFPLIGDVFAPPSILYFDPRLQNQR-------LRFEPRRECGGGGVD 175
            S         RF FP I        ++ FD R ++         +R+E RR      +D
Sbjct: 121 SS---------RFPFPKIQ---VKAGMMVFDERSESDSSSVVMDVVRYEGRRVV----LD 163

[Close]
BLAST of Sed0019113 vs. ExPASy Swiss-Prot
Match: Q9FE67 (Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=ERF9 PE=1 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 3.7e-27
Identity = 77/176 (43.75%), Postives = 98/176 (55.68%), Query Frame = 0 

Query: 16  EMHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARAYDAAAREFRGAKAKTNFP 75
           E+HFRGVRKRPWGRYAAEIRDP KK+RVWLGTFDTAEEAARAYD AAREFRG+KAKTNFP
Sbjct: 30  EVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNFP 89

Query: 76  VP-----------SPNHQSPTHSSTVESSSRDQPPIVDSSPLNLAAAAVGSIGYNSFHLR 135
           +P           + ++ + T  +T    +R + P       +     VG      F   
Sbjct: 90  LPGESTTVNDGGENDSYVNRTTVTTAREMTRQRFPFA----CHRERKVVGGYASAGFFFD 149

Query: 136 RFQFPLIGDVFAPPSILYFDP---RLQ---NQRLRFEPRRECGGGGVDFDLNFPPP 175
             +   +    +    + FDP    L     + ++ EPRRE     ++ DLN  PP
Sbjct: 150 PSRAASLRAELSRVCPVRFDPVNIELSIGIRETVKVEPRRE-----LNLDLNLAPP 196

[Close]
BLAST of Sed0019113 vs. ExPASy Swiss-Prot
Match: Q9MAI5 (Ethylene-responsive transcription factor 8 OS=Arabidopsis thaliana OX=3702 GN=ERF8 PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 5.4e-26
Identity = 78/169 (46.15%), Postives = 96/169 (56.80%), Query Frame = 0 

Query: 16  EMHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARAYDAAAREFRGAKAKTNFP 75
           E+ +RGVRKRPWGRYAAEIRDP KK+RVWLGTFDTA++AARAYDAAAR+FRG KAKTNF 
Sbjct: 28  EIRYRGVRKRPWGRYAAEIRDPVKKTRVWLGTFDTAQQAARAYDAAARDFRGVKAKTNFG 87

Query: 76  VPSPNHQSPTHSSTVESSSRDQPPIVDSSPLNLAAAAVGSIGYNSFHLRRFQFPLIGDVF 135
           V   +  SPT SSTV  S       +    L L+    G+         R + PL+  V+
Sbjct: 88  VIVGS--SPTQSSTVVDSP-TAARFITPPHLELSLGGGGAC--------RRKIPLVHPVY 147

Query: 136 APPSILYFDPRLQNQRLRFEPRREC-----GGGG-----VDFDLNFPPP 175
                 Y  P++    ++ E          GG G     +D DLN  PP
Sbjct: 148 YYNMATY--PKMTTCGVQSESETSSVVDFEGGAGKISPPLDLDLNLAPP 183

[Close]
BLAST of Sed0019113 vs. ExPASy TrEMBL
Match: A0A6J1ILY8 (ethylene-responsive transcription factor 4-like OS=Cucurbita maxima OX=3661 GN=LOC111478617 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 2.0e-52
Identity = 131/247 (53.04%), Postives = 150/247 (60.73%), Query Frame = 0 

Query: 1   MTPRDIAVAVKQDDG---EMHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60
           M PR+ AVAVK + G   E+HFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA
Sbjct: 1   MAPREKAVAVKANVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60

Query: 61  YDAAAREFRGAKAKTNFPVPS------------PNHQSPTHSSTVESSSRDQPPIVDSSP 120
           YD AAREFRG KAKTNFP+PS             N+QSP+ SSTVESSSR+QP +VDSSP
Sbjct: 61  YDKAAREFRGVKAKTNFPMPSYDLLNLNNKINISNNQSPSQSSTVESSSREQPLMVDSSP 120

Query: 121 LNL----AAAAVGSIGYNSFHLRRFQFPLIGDVFA---PPS--ILYFDPRLQ-------- 178
           LNL        + S G  +F  +R+Q P+IG+VF+   PPS  +LYFD  L+        
Sbjct: 121 LNLNLGHGMPGLTSTGAVTFPFQRYQIPMIGEVFSRGIPPSNHVLYFDAALRAGMIKTHP 180

[Close]
BLAST of Sed0019113 vs. ExPASy TrEMBL
Match: A0A6J1EIT5 (ethylene-responsive transcription factor 4-like OS=Cucurbita moschata OX=3662 GN=LOC111433009 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 4.5e-52
Identity = 133/249 (53.41%), Postives = 152/249 (61.04%), Query Frame = 0 

Query: 1   MTPRDIAVAVKQDDG---EMHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60
           M PR+ AVAVK + G   E+HFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA
Sbjct: 1   MAPREKAVAVKANVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60

Query: 61  YDAAAREFRGAKAKTNFPVPSP-------------NHQSPTHSSTVESSSRDQPPIVDSS 120
           YD AAREFRG KAKTNFP+PS              N+QSP+ SSTVESSSR+QP +VDSS
Sbjct: 61  YDKAAREFRGVKAKTNFPLPSDDLLNLNNKINNINNNQSPSQSSTVESSSREQPLMVDSS 120

Query: 121 PLNLAAA----AVGSIGYNSFHLRRFQFPLIGDVFA---PPS--ILYFDPRLQ------- 178
           PLNL  A     + + G  +F  +R+Q P+IG+VF+   PPS  +LYFD  L+       
Sbjct: 121 PLNLNLAHGMPGLTAAGAVTFPFQRYQIPMIGEVFSRGIPPSNHVLYFDAALRAGMIKTH 180

[Close]
BLAST of Sed0019113 vs. ExPASy TrEMBL
Match: A0A6J1CKD6 (ethylene-responsive transcription factor 4-like OS=Momordica charantia OX=3673 GN=LOC111012250 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 3.3e-50
Identity = 128/238 (53.78%), Postives = 144/238 (60.50%), Query Frame = 0 

Query: 1   MTPRDIAVAVKQDDG---EMHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60
           M PR+ AVAVK + G   E+HFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA
Sbjct: 1   MAPREKAVAVKGNGGSVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60

Query: 61  YDAAAREFRGAKAKTNFPVPSP------------NHQSPTHSSTVESSSRDQPPIVDSSP 120
           YD AAREFRGAKAKTNFP+PS             N+QSP+ SSTVESSSR+Q  +VDSSP
Sbjct: 61  YDTAAREFRGAKAKTNFPLPSQDLLNLNNKINNINNQSPSQSSTVESSSREQALMVDSSP 120

Query: 121 LNLAAAAVGSIGYNSFHLRRFQFPLIGDVFA---PPS--ILYFDPRL---------QNQR 178
           LNL     G  G  S   +R+Q P+IG+VFA   P S  +LYFD            QNQR
Sbjct: 121 LNLNLGH-GIAGAISIPFQRYQIPMIGNVFARGIPASNHLLYFDAAFRSGMIKSHHQNQR 180

[Close]
BLAST of Sed0019113 vs. ExPASy TrEMBL
Match: A0A6J1EGP7 (ethylene-responsive transcription factor 4-like OS=Cucurbita moschata OX=3662 GN=LOC111433934 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 9.5e-50
Identity = 135/252 (53.57%), Postives = 147/252 (58.33%), Query Frame = 0 

Query: 1   MTPRDIAVAVKQDDG---EMHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60
           M PRD AV VK + G   E+HFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA
Sbjct: 1   MAPRDKAVPVKPNVGNLKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60

Query: 61  YDAAAREFRGAKAKTNFPVPSP-----------NHQSPTHSSTVESSSRDQPPIVDSSPL 120
           YD AAR FRGAKAKTNFP+PS            N+QSP+ SSTVESSSR+Q  +VDSSPL
Sbjct: 61  YDNAARGFRGAKAKTNFPLPSDDLLNLNNKINNNNQSPSQSSTVESSSREQALMVDSSPL 120

Query: 121 N-------LAAAAVGSIGYNSFHLRRFQFPLIGDVF----APPS--ILYFD--------- 178
           N          AA GSI   +F  +R+Q P+I D       PPS  +L FD         
Sbjct: 121 NHNLGHGISGLAANGSI---TFPFQRYQIPVIRDALLARAMPPSNHVLCFDAALRAGVIK 180

[Close]
BLAST of Sed0019113 vs. ExPASy TrEMBL
Match: A0A6J1KRH5 (ethylene-responsive transcription factor 4-like OS=Cucurbita maxima OX=3661 GN=LOC111496975 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 6.1e-49
Identity = 130/247 (52.63%), Postives = 144/247 (58.30%), Query Frame = 0 

Query: 1   MTPRDIAVAVKQDDG---EMHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60
           M PRD AV VK + G   E+HFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA
Sbjct: 1   MAPRDKAVPVKPNVGNLKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60

Query: 61  YDAAAREFRGAKAKTNFPVPSP-----------NHQSPTHSSTVESSSRDQPPIVDSSP- 120
           YD AAR FRGAKAKTNFP+PS            N QSP+ SSTVESSSR+QP +VDSSP 
Sbjct: 61  YDNAARGFRGAKAKTNFPLPSDGLLNLHNKINNNSQSPSQSSTVESSSREQPLMVDSSPS 120

Query: 121 ---LNLAAAAVGSIGYNSFHLRRFQFPLIGDVF----APPS--ILYFD-----------P 178
              L    + + + G  +F   R+Q P+IGD       PPS  +L FD           P
Sbjct: 121 NHNLGHGISGLAANGAITFPFHRYQIPVIGDALLARAMPPSNHVLCFDAALRAGVIKSHP 180

[Close]
BLAST of Sed0019113 vs. TAIR 10
Match: AT1G28370.1 (ERF domain protein 11 )

HSP 1 Score: 137.1 bits (344), Expect = 1.4e-32
Identity = 92/188 (48.94%), Postives = 108/188 (57.45%), Query Frame = 0 

Query: 1   MTPRDIAVAVKQDDGE-MHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARAYD 60
           M P     AVK ++G  + +RGVRKRPWGRYAAEIRDP KKSRVWLGTFDT EEAARAYD
Sbjct: 1   MAPTVKTAAVKTNEGNGVRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYD 60

Query: 61  AAAREFRGAKAKTNFPVPSPN------HQSPTHSSTVESSSRDQPPIVDSSPLNLAAAAV 120
             A EFRGAKAKTNFP  + N       QS + SSTVESS  +         LNL + +V
Sbjct: 61  KRAIEFRGAKAKTNFPCYNINAHCLSLTQSLSQSSTVESSFPN---------LNLGSDSV 120

Query: 121 GSIGYNSFHLRRFQFPLIGDVFAPPSILYFDPRLQNQR-------LRFEPRRECGGGGVD 175
            S         RF FP I        ++ FD R ++         +R+E RR      +D
Sbjct: 121 SS---------RFPFPKIQ---VKAGMMVFDERSESDSSSVVMDVVRYEGRRVV----LD 163

[Close]
BLAST of Sed0019113 vs. TAIR 10
Match: AT5G44210.1 (erf domain protein 9 )

HSP 1 Score: 122.9 bits (307), Expect = 2.6e-28
Identity = 77/176 (43.75%), Postives = 98/176 (55.68%), Query Frame = 0 

Query: 16  EMHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARAYDAAAREFRGAKAKTNFP 75
           E+HFRGVRKRPWGRYAAEIRDP KK+RVWLGTFDTAEEAARAYD AAREFRG+KAKTNFP
Sbjct: 30  EVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNFP 89

Query: 76  VP-----------SPNHQSPTHSSTVESSSRDQPPIVDSSPLNLAAAAVGSIGYNSFHLR 135
           +P           + ++ + T  +T    +R + P       +     VG      F   
Sbjct: 90  LPGESTTVNDGGENDSYVNRTTVTTAREMTRQRFPFA----CHRERKVVGGYASAGFFFD 149

Query: 136 RFQFPLIGDVFAPPSILYFDP---RLQ---NQRLRFEPRRECGGGGVDFDLNFPPP 175
             +   +    +    + FDP    L     + ++ EPRRE     ++ DLN  PP
Sbjct: 150 PSRAASLRAELSRVCPVRFDPVNIELSIGIRETVKVEPRRE-----LNLDLNLAPP 196

[Close]
BLAST of Sed0019113 vs. TAIR 10
Match: AT1G53170.1 (ethylene response factor 8 )

HSP 1 Score: 119.0 bits (297), Expect = 3.8e-27
Identity = 78/169 (46.15%), Postives = 96/169 (56.80%), Query Frame = 0 

Query: 16  EMHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARAYDAAAREFRGAKAKTNFP 75
           E+ +RGVRKRPWGRYAAEIRDP KK+RVWLGTFDTA++AARAYDAAAR+FRG KAKTNF 
Sbjct: 28  EIRYRGVRKRPWGRYAAEIRDPVKKTRVWLGTFDTAQQAARAYDAAARDFRGVKAKTNFG 87

Query: 76  VPSPNHQSPTHSSTVESSSRDQPPIVDSSPLNLAAAAVGSIGYNSFHLRRFQFPLIGDVF 135
           V   +  SPT SSTV  S       +    L L+    G+         R + PL+  V+
Sbjct: 88  VIVGS--SPTQSSTVVDSP-TAARFITPPHLELSLGGGGAC--------RRKIPLVHPVY 147

Query: 136 APPSILYFDPRLQNQRLRFEPRREC-----GGGG-----VDFDLNFPPP 175
                 Y  P++    ++ E          GG G     +D DLN  PP
Sbjct: 148 YYNMATY--PKMTTCGVQSESETSSVVDFEGGAGKISPPLDLDLNLAPP 183

[Close]
BLAST of Sed0019113 vs. TAIR 10
Match: AT3G15210.1 (ethylene responsive element binding factor 4 )

HSP 1 Score: 118.6 bits (296), Expect = 5.0e-27
Identity = 61/88 (69.32%), Postives = 71/88 (80.68%), Query Frame = 0 

Query: 16  EMHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARAYDAAAREFRGAKAKTNFP 75
           E+ +RGVRKRPWGRYAAEIRDP KK+RVWLGTFDTAEEAARAYD AAR+FRGAKAKTNFP
Sbjct: 22  EIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAARDFRGAKAKTNFP 81

Query: 76  ---------VPSPNHQSPTHSSTVESSS 95
                    VP+   +SP+ SST++ +S
Sbjct: 82  TFLELSDQKVPTGFARSPSQSSTLDCAS 109

[Close]
BLAST of Sed0019113 vs. TAIR 10
Match: AT1G50640.1 (ethylene responsive element binding factor 3 )

HSP 1 Score: 112.8 bits (281), Expect = 2.7e-25
Identity = 53/79 (67.09%), Postives = 62/79 (78.48%), Query Frame = 0 

Query: 6  IAVAVKQDDGEMHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARAYDAAAREF 65
          +  A+     E+ FRGVRKRPWGR+AAEIRDP KK+RVWLGTFD+AEEAARAYD+AAR  
Sbjct: 15 VVAAINGSVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEEAARAYDSAARNL 74

Query: 66 RGAKAKTNFPVPSPNHQSP 85
          RG KAKTNFP+ S +   P
Sbjct: 75 RGPKAKTNFPIDSSSPPPP 93

The following BLAST results are available for this feature:
BLAST of Sed0019113 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022978752.14.2e-5253.04ethylene-responsive transcription factor 4-like [Cucurbita maxima][more]
XP_023545040.17.2e-5252.82ethylene-responsive transcription factor 4-like [Cucurbita pepo subsp. pepo][more]
XP_022925660.19.4e-5253.41ethylene-responsive transcription factor 4-like [Cucurbita moschata] >KAG7034605... [more]
KAG6604462.11.6e-5152.42Ethylene-responsive transcription factor 4, partial [Cucurbita argyrosperma subs... [more]
XP_038883348.12.7e-5152.00ethylene-responsive transcription factor 4-like [Benincasa hispida][more]
BLAST of Sed0019113 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q404772.0e-3345.89Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum OX=4097 GN=ERF4 ... [more]
Q9LW495.9e-3346.34Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris OX=4096 GN=ER... [more]
Q9C5I31.9e-3148.94Ethylene-responsive transcription factor 11 OS=Arabidopsis thaliana OX=3702 GN=E... [more]
Q9FE673.7e-2743.75Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=ER... [more]
Q9MAI55.4e-2646.15Ethylene-responsive transcription factor 8 OS=Arabidopsis thaliana OX=3702 GN=ER... [more]
BLAST of Sed0019113 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1ILY82.0e-5253.04ethylene-responsive transcription factor 4-like OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1EIT54.5e-5253.41ethylene-responsive transcription factor 4-like OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1CKD63.3e-5053.78ethylene-responsive transcription factor 4-like OS=Momordica charantia OX=3673 G... [more]
A0A6J1EGP79.5e-5053.57ethylene-responsive transcription factor 4-like OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1KRH56.1e-4952.63ethylene-responsive transcription factor 4-like OS=Cucurbita maxima OX=3661 GN=L... [more]
BLAST of Sed0019113 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G28370.11.4e-3248.94ERF domain protein 11 [more]
AT5G44210.12.6e-2843.75erf domain protein 9 [more]
AT1G53170.13.8e-2746.15ethylene response factor 8 [more]
AT3G15210.15.0e-2769.32ethylene responsive element binding factor 4 [more]
AT1G50640.12.7e-2567.09ethylene responsive element binding factor 3 [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 19..30
score: 60.91
coord: 41..57
score: 75.4
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 18..81
e-value: 6.3E-39
score: 145.3
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 18..67
e-value: 4.8E-15
score: 55.5
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 18..75
score: 23.74897
IPR001471AP2/ERF domainCDDcd00018AP2coord: 18..76
e-value: 5.56088E-19
score: 74.2303
IPR036955AP2/ERF domain superfamilyGENE3D3.30.730.10AP2/ERF domaincoord: 17..76
e-value: 8.0E-29
score: 101.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..101
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..103
NoneNo IPR availablePANTHERPTHR31677:SF151ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 4-LIKEcoord: 1..155
NoneNo IPR availablePANTHERPTHR31677AP2 DOMAIN CLASS TRANSCRIPTION FACTORcoord: 1..155
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 18..76

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0019113.1Sed0019113.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 DNA-binding transcription factor activity