Sed0018901 (gene) Chayote v1

Overview


Name	Sed0018901
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein WHAT'S THIS FACTOR 1
Location	LG12: 3854094 .. 3858495 (-)
RNA-Seq Expression	Sed0018901
Synteny	Sed0018901

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCTCCGATCAGCGCCGTCGCTTCCGCCGACGAAATATCCTGTTTGTCATCTAAGAAGTCTGATTCAGCCACCGTCAAATTTCGGCCCGAGAGTCTCTAATCACAGTGCTGGTACCTGAACATTGGAACTCAGACGAGATTATGGAGCAGCAGATTCCGAAAGGTACGCCACTCCGACTCCATTGCCAATATGTACTGAACACACCACAGCACAACAGGGATGCGAGTTATCACTGTTTCTAAGTTTATCGCAAGGGAGTGTTTGAGGCTAAACAAAGAGAGAATGATTATGGGGATGGTGAAAATTAGAGGAAGAACATGGGGGAGGGATTGCGGGGAAATTATTATTTGCATTTGGGGTAAATAGAATGATTATGGTGAGAACTGTTGAAAAGTAGTTATAATGAGAATAAAAAAGACATTATGGGGAGAATAAAAACTAGTTTTGTGACAATAGAAAGAGATTATTAAGAAAAAATGAGATTATGAAGGAAAGAGTGGATAAGAGGATTATTCTCCTCATAATCGTTTTCATTCCCATTCCCAAACACCCATAAAGGATATTGATTATGAATATTATGCTGATCTTTATTTGTATTTTACTAGGAAAATGATTTTCTGGATATTGTAGCGCATTGCTATTTTTTCTGTTCACAATTTTTCACTTTGTACAAGTTGAGAAAATATGTGTTGTTCTCAATGCCATTGGACCTAAGATGTACTGAAATGTTTAAGTGTATAAATGTCATTATGTACTGCAGGTGATAAAGAGCCTGAAGGTAATTGATTACAGTTTTAACTGTTGATGCAGGACAGTAGAATCCCCCATTTGATGCTCTTGAACCAGAGTTAGAAGAACTATATGTGTCATACTCTTTAGATAAGCTCTATGAATTTGTGTTCATATTGTAGGTTAAAAGGACTTCCAGTGATACAAAACTGAAAAATGGCTTTATCTTCTCATTTCTTGACCCCTAGGGACTGCCATGTAACATTCCTTAGTTCAAACCTTCTCCTTGGCAGTCCATTGTGGTTGCGTTCCAATGTTGGTTACAAGTACCAGAGAAAAGGAAATTTCAAGATTCGTTATGCTTTGACTCCTTGTTCCTCCCTCAAGATTGTCCGTAGTCGTTCGTTAGATCGGCATGCTGTAAAACATAACCAAACTCGTTTTGTACAAAAGCTGATAATACTATTGCTATCTAAGCCAAAGCATTTTATGCCACTCCACATTCTTTCCAAGTGTCGTGGCTATCTTTCCCTTCCCAGACCTCGCTCCCTCATTTCAATGATTCATCGTTATCCTTCCATTTTCGAACTTTTTTCAATCCCTTACCCACCCACACCACTCAATGCAACAAAGCTATATCCCCAACTTTGTGTTCGTCTAACTCCAGCAGCAGCATCTCTTGCTAAACAGGACTCTGATCTCAAATTGGCCATCTCTAACACCTTGGCTGAGAAGCTCCAAAAACTACTTATGCTTTCTTCACACCACAGGATTCTATTGTCAAAGTTGGTCCACCTTGCTCCCGATTTAAGCATGCCCCCTAATTTTCGGTCCCGCCTTTGTAATGATTATCCAGATAAATTCAAGACTGTTGATACCTCATATGGCCGTGCACTGGAGCTTGTCTCATGGGACCCAGAGTTGGCAAGGCCTTTACCTGGCCTTCAATTTCCATCACGTGAGCTAATAGTGGATAGGCCTTTAAAATTCAACTTGTTGAGACTAAGAAAGGGGCTGAATTTGAAAAGAGCACACCAGGAATTTCTAATCAAGTTCAGGGATTTGCCAGATATTTGTCCTTACAAGACTCCTGCAAGTGAGTTGGCTAAGGAGTCTCTTGAGTCCGAGAAACGAGCTTGTGCTGTGGTGCGAGAGGTATTGGCGATGATGATTGAGAAGAGGACTTTAATAGATCACTTGACACATTTCAGAAAAGATTTCGGGCTGCCCAATAAACTGAGAGGGATGATTGTGAGGCATCCAGAGTTATTTTATGTGAGTTTGAAGGGTCAGAGAGACTCTGTATTCCTTGTGGAGGGGTTTGATGATAAAGGTGTTCTAATGGAGAAGGATGAAACTTTGGCAATAAAAAATCAATGGGTGAAGCTTTTAGTGGAAGGTAAAAGGGTGAGGCGGGAGAAGAGGAAAGCTCAAATATATGACAGTAAATATGGAAATGATGATGAAAATGACAATCATGATCATGGGATGGGAACTGACTATGACGATGATTACGATGATGGTTTTGAGAGTTTATTTCAGTACGAAGATTTAGAATTTGAGGATGAAGGGAGCGACCTGCCAATCAATAGGTCGAATGGCGACTTTTGGACTACAAATAATGTAAATATTATTAATGATAATGACGCAGATGGACATATAGAACCTTGGTGATGGTTAATTTAAGTTGTTTGATGTATCTGGAAGATAATTCGAAATTTTCTATATTTAAACAAAGTGCTCTTCAGTGTGTATACCATATTCAATTCAGAAGAAAAGCACATTGTTTCGATAAGCGCCTTGGAGGCTCAAAGGATGTTTAAATGTAGCCTGATGATCTATAGGAAGAGCTAAAGCTACTGCCTCTAAGCCCATCTATTTGTGCACAAGCAAGGTCCCCATGACTTATCCTCTGCTGATATACCACCATACCTTCTCAGGCTCTGTATAATTCGGACCTGGCTTGTCATGTTCATATATCTCCTCATAATGTACAATGGGAGAAGTATGAAGTGGGAATGAAATTCTCCCTCATCAAAGAGGGAGAGGGACGCATGGAGTGAATCGAGAGGTAAGTCCTAGCTCTTATTTATGTATACCATTAGAAATTAAAACAACAAATCCATGTTCATAAATAAGATAAATATTCAAATATAGTTTGGCACATTATCTCTACTCCTTGGTCATTGGCAGTGAATGTATTCAGAATTTTTTTTCTCCCCTAATAACTGGTTTTTAGTAACATTCTCATTTTTAAGAAACAATTACCAAACTGTTTTGTTTTTCTTGCTTAGAAGCAGAAAACACGGGGCAAGAAATAAGGTTGTCACCAACTAAGCCCTAAATTCTTCTGTTAAGCATGAGAATAATATTGACCCCCCAACACCCCATCAATGACCTAGCTAGGGTTGGCTCGGTCCACAAGTAGCTCGTGTTGGGGATATGTATCATATCGTGTATTTGGTGGAGCATTATGGATGGATCCTTCTAGCTTTGGTTGTATCCGTAGTGTATGCTCCTAAATTAATTAATTGGCCTCTGATGACTGCACAGTATCAGATATTCTGTGTGGACAGATACGGGTCAAACATTTTTATCCATTCTATGATCTGTTACATGTTTTACATGTTTCCTTAAATTTCAGTTTCTGCAGGTATGCTAATAATATGCTTATTTCACTGCTGTTTTGCGATGTTTGTCTAGCTTTTTTATGCACATATGACATAAGCATTATTTATGATATCTTATATACTTTCCAGTTTTCATACAGAAAACATATAGGTGTTGCTAAACATTTTCCCTGACTAGACTTTGTTTCTTCTTGATGTTTGTTGGACTATAGTTGTTTGATGAACACACATCAATTATTACAACTTAAAAAGCTTTGTTATCTAAAAAGACACACCCACGCATTCTTTAAATCAGCAGAAAGCATACTTGAAATGTGCATTATGATCATCGTGCTCTGTGCAATTGATATGCATGCATTTGTACTAATCATGTGTTAAATGTTTGGTAAGGGTGAGTTTGGGACAACTTTTAGAGGGTAAAAGTACTTTTCAAAACTTTGATGTTCATTATTTATGATGTCCAAAGAAACATGTAAACATTTTGGAGTACTTATAATGGAAACACTTAATTAGATTTCTTTCAAAATTACTTGTAGAAAAAGTACTCAACTTAAAAATACCTTAAAATTCATCCCAAGTTATATTCATTGTGTGCACTTTTGTGTAATTGATATGCTAATTATCTATGCTGAATGTTCATTTTCCAAGGGTCTAAGGATACTTTAAAGTACTCAAAGGGGCC

mRNA sequence

CCCTCCGATCAGCGCCGTCGCTTCCGCCGACGAAATATCCTGTTTGTCATCTAAGAAGTCTGATTCAGCCACCGTCAAATTTCGGCCCGAGAGTCTCTAATCACAGTGCTGGTACCTGAACATTGGAACTCAGACGAGATTATGGAGCAGCAGATTCCGAAAGGACAGTAGAATCCCCCATTTGATGCTCTTGAACCAGAGTTAGAAGAACTATATGTGTCATACTCTTTAGATAAGCTCTATGAATTTGTGTTCATATTGTAGGTTAAAAGGACTTCCAGTGATACAAAACTGAAAAATGGCTTTATCTTCTCATTTCTTGACCCCTAGGGACTGCCATGTAACATTCCTTAGTTCAAACCTTCTCCTTGGCAGTCCATTGTGGTTGCGTTCCAATGTTGGTTACAAGTACCAGAGAAAAGGAAATTTCAAGATTCGTTATGCTTTGACTCCTTGTTCCTCCCTCAAGATTGTCCGTAGTCGTTCGTTAGATCGGCATGCTGTAAAACATAACCAAACTCGTTTTGTACAAAAGCTGATAATACTATTGCTATCTAAGCCAAAGCATTTTATGCCACTCCACATTCTTTCCAAGTGTCGTGGCTATCTTTCCCTTCCCAGACCTCGCTCCCTCATTTCAATGATTCATCGTTATCCTTCCATTTTCGAACTTTTTTCAATCCCTTACCCACCCACACCACTCAATGCAACAAAGCTATATCCCCAACTTTGTGTTCGTCTAACTCCAGCAGCAGCATCTCTTGCTAAACAGGACTCTGATCTCAAATTGGCCATCTCTAACACCTTGGCTGAGAAGCTCCAAAAACTACTTATGCTTTCTTCACACCACAGGATTCTATTGTCAAAGTTGGTCCACCTTGCTCCCGATTTAAGCATGCCCCCTAATTTTCGGTCCCGCCTTTGTAATGATTATCCAGATAAATTCAAGACTGTTGATACCTCATATGGCCGTGCACTGGAGCTTGTCTCATGGGACCCAGAGTTGGCAAGGCCTTTACCTGGCCTTCAATTTCCATCACGTGAGCTAATAGTGGATAGGCCTTTAAAATTCAACTTGTTGAGACTAAGAAAGGGGCTGAATTTGAAAAGAGCACACCAGGAATTTCTAATCAAGTTCAGGGATTTGCCAGATATTTGTCCTTACAAGACTCCTGCAAGTGAGTTGGCTAAGGAGTCTCTTGAGTCCGAGAAACGAGCTTGTGCTGTGGTGCGAGAGGTATTGGCGATGATGATTGAGAAGAGGACTTTAATAGATCACTTGACACATTTCAGAAAAGATTTCGGGCTGCCCAATAAACTGAGAGGGATGATTGTGAGGCATCCAGAGTTATTTTATGTGAGTTTGAAGGGTCAGAGAGACTCTGTATTCCTTGTGGAGGGGTTTGATGATAAAGGTGTTCTAATGGAGAAGGATGAAACTTTGGCAATAAAAAATCAATGGGTGAAGCTTTTAGTGGAAGGTAAAAGGGTGAGGCGGGAGAAGAGGAAAGCTCAAATATATGACAGTAAATATGGAAATGATGATGAAAATGACAATCATGATCATGGGATGGGAACTGACTATGACGATGATTACGATGATGGTTTTGAGAGTTTATTTCAGTACGAAGATTTAGAATTTGAGGATGAAGGGAGCGACCTGCCAATCAATAGGTCGAATGGCGACTTTTGGACTACAAATAATGTAAATATTATTAATGATAATGACGCAGATGGACATATAGAACCTTGGTGATGGTTAATTTAAGTTGTTTGATGTATCTGGAAGATAATTCGAAATTTTCTATATTTAAACAAAGTGCTCTTCAGTGTGTATACCATATTCAATTCAGAAGAAAAGCACATTGTTTCGATAAGCGCCTTGGAGGCTCAAAGGATGTTTAAATGTAGCCTGATGATCTATAGGAAGAGCTAAAGCTACTGCCTCTAAGCCCATCTATTTGTGCACAAGCAAGGTCCCCATGACTTATCCTCTGCTGATATACCACCATACCTTCTCAGGCTCTGTATAATTCGGACCTGGCTTGTCATGTTCATATATCTCCTCATAATGTACAATGGGAGAAGTATGAAGTGGGAATGAAATTCTCCCTCATCAAAGAGGGAGAGGGACGCATGGAGTGAATCGAGAGGTAAGTCCTAGCTCTTATTTATGTATACCATTAGAAATTAAAACAACAAATCCATGTTCATAAATAAGATAAATATTCAAATATAGTTTGGCACATTATCTCTACTCCTTGGTCATTGGCAGTGAATGTATTCAGAATTTTTTTTCTCCCCTAATAACTGGTTTTTAGTAACATTCTCATTTTTAAGAAACAATTACCAAACTGTTTTGTTTTTCTTGCTTAGAAGCAGAAAACACGGGGCAAGAAATAAGGTTGTCACCAACTAAGCCCTAAATTCTTCTGTTAAGCATGAGAATAATATTGACCCCCCAACACCCCATCAATGACCTAGCTAGGGTTGGCTCGGTCCACAAGTAGCTCGTGTTGGGGATATGTATCATATCGTGTATTTGGTGGAGCATTATGGATGGATCCTTCTAGCTTTGGTTGTATCCGTAGTGTATGCTCCTAAATTAATTAATTGGCCTCTGATGACTGCACAGTATCAGATATTCTGTGTGGACAGATACGGGTCAAACATTTTTATCCATTCTATGATCTGTTACATGTTTTACATGTTTCCTTAAATTTCAGTTTCTGCAGGTATGCTAATAATATGCTTATTTCACTGCTGTTTTGCGATGTTTGTCTAGCTTTTTTATGCACATATGACATAAGCATTATTTATGATATCTTATATACTTTCCAGTTTTCATACAGAAAACATATAGGTGTTGCTAAACATTTTCCCTGACTAGACTTTGTTTCTTCTTGATGTTTGTTGGACTATAGTTGTTTGATGAACACACATCAATTATTACAACTTAAAAAGCTTTGTTATCTAAAAAGACACACCCACGCATTCTTTAAATCAGCAGAAAGCATACTTGAAATGTGCATTATGATCATCGTGCTCTGTGCAATTGATATGCATGCATTTGTACTAATCATGTGTTAAATGTTTGGTAAGGGTGAGTTTGGGACAACTTTTAGAGGGTAAAAGTACTTTTCAAAACTTTGATGTTCATTATTTATGATGTCCAAAGAAACATGTAAACATTTTGGAGTACTTATAATGGAAACACTTAATTAGATTTCTTTCAAAATTACTTGTAGAAAAAGTACTCAACTTAAAAATACCTTAAAATTCATCCCAAGTTATATTCATTGTGTGCACTTTTGTGTAATTGATATGCTAATTATCTATGCTGAATGTTCATTTTCCAAGGGTCTAAGGATACTTTAAAGTACTCAAAGGGGCC

Coding sequence (CDS)

ATGGCTTTATCTTCTCATTTCTTGACCCCTAGGGACTGCCATGTAACATTCCTTAGTTCAAACCTTCTCCTTGGCAGTCCATTGTGGTTGCGTTCCAATGTTGGTTACAAGTACCAGAGAAAAGGAAATTTCAAGATTCGTTATGCTTTGACTCCTTGTTCCTCCCTCAAGATTGTCCGTAGTCGTTCGTTAGATCGGCATGCTGTAAAACATAACCAAACTCGTTTTGTACAAAAGCTGATAATACTATTGCTATCTAAGCCAAAGCATTTTATGCCACTCCACATTCTTTCCAAGTGTCGTGGCTATCTTTCCCTTCCCAGACCTCGCTCCCTCATTTCAATGATTCATCGTTATCCTTCCATTTTCGAACTTTTTTCAATCCCTTACCCACCCACACCACTCAATGCAACAAAGCTATATCCCCAACTTTGTGTTCGTCTAACTCCAGCAGCAGCATCTCTTGCTAAACAGGACTCTGATCTCAAATTGGCCATCTCTAACACCTTGGCTGAGAAGCTCCAAAAACTACTTATGCTTTCTTCACACCACAGGATTCTATTGTCAAAGTTGGTCCACCTTGCTCCCGATTTAAGCATGCCCCCTAATTTTCGGTCCCGCCTTTGTAATGATTATCCAGATAAATTCAAGACTGTTGATACCTCATATGGCCGTGCACTGGAGCTTGTCTCATGGGACCCAGAGTTGGCAAGGCCTTTACCTGGCCTTCAATTTCCATCACGTGAGCTAATAGTGGATAGGCCTTTAAAATTCAACTTGTTGAGACTAAGAAAGGGGCTGAATTTGAAAAGAGCACACCAGGAATTTCTAATCAAGTTCAGGGATTTGCCAGATATTTGTCCTTACAAGACTCCTGCAAGTGAGTTGGCTAAGGAGTCTCTTGAGTCCGAGAAACGAGCTTGTGCTGTGGTGCGAGAGGTATTGGCGATGATGATTGAGAAGAGGACTTTAATAGATCACTTGACACATTTCAGAAAAGATTTCGGGCTGCCCAATAAACTGAGAGGGATGATTGTGAGGCATCCAGAGTTATTTTATGTGAGTTTGAAGGGTCAGAGAGACTCTGTATTCCTTGTGGAGGGGTTTGATGATAAAGGTGTTCTAATGGAGAAGGATGAAACTTTGGCAATAAAAAATCAATGGGTGAAGCTTTTAGTGGAAGGTAAAAGGGTGAGGCGGGAGAAGAGGAAAGCTCAAATATATGACAGTAAATATGGAAATGATGATGAAAATGACAATCATGATCATGGGATGGGAACTGACTATGACGATGATTACGATGATGGTTTTGAGAGTTTATTTCAGTACGAAGATTTAGAATTTGAGGATGAAGGGAGCGACCTGCCAATCAATAGGTCGAATGGCGACTTTTGGACTACAAATAATGTAAATATTATTAATGATAATGACGCAGATGGACATATAGAACCTTGGTGA

Protein sequence

MALSSHFLTPRDCHVTFLSSNLLLGSPLWLRSNVGYKYQRKGNFKIRYALTPCSSLKIVRSRSLDRHAVKHNQTRFVQKLIILLLSKPKHFMPLHILSKCRGYLSLPRPRSLISMIHRYPSIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASLAKQDSDLKLAISNTLAEKLQKLLMLSSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPDKFKTVDTSYGRALELVSWDPELARPLPGLQFPSRELIVDRPLKFNLLRLRKGLNLKRAHQEFLIKFRDLPDICPYKTPASELAKESLESEKRACAVVREVLAMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQRDSVFLVEGFDDKGVLMEKDETLAIKNQWVKLLVEGKRVRREKRKAQIYDSKYGNDDENDNHDHGMGTDYDDDYDDGFESLFQYEDLEFEDEGSDLPINRSNGDFWTTNNVNIINDNDADGHIEPW

Homology

[Close]

BLAST of Sed0018901 vs. NCBI nr
Match: XP_038904265.1 (protein WHAT'S THIS FACTOR 1, chloroplastic [Benincasa hispida] >XP_038904305.1 protein WHAT'S THIS FACTOR 1, chloroplastic [Benincasa hispida])

HSP 1 Score: 861.7 bits (2225), Expect = 3.1e-246
Identity = 432/485 (89.07%), Postives = 457/485 (94.23%), Query Frame = 0


Query: 1   MALSSHFLTPRDCHVTFLSSNLLLGSPLWLRSNVGYKYQRKGNFKIRYALTPCSSLKIVR 60
           M LSSHFLTP D HVT LSSNLL G+PLWL SNV  KYQRK NF+ RY LTPCSSLKIVR
Sbjct: 1   MVLSSHFLTPTDWHVTLLSSNLLCGNPLWLHSNVSCKYQRKENFETRYTLTPCSSLKIVR 60

Query: 61  SRSLDRHAVKHNQTRFVQKLIILLLSKPKHFMPLHILSKCRGYLSLPRPRSLISMIHRYP 120
           SRSLDRHAVKHN+TRFVQKLIILLLSKPKH++PLHILSKCRGYLSLPRPRSL+SMIHRYP
Sbjct: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120

Query: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASLAKQDSDLKLAISNTLAEKLQKLLML 180
           SIFELFSIPYPPTPLNATK+YPQLCVRLTPAAASLAKQDSDLKL ISNTLAEKLQKLLML
Sbjct: 121 SIFELFSIPYPPTPLNATKVYPQLCVRLTPAAASLAKQDSDLKLVISNTLAEKLQKLLML 180

Query: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPDKFKTVDTSYGRALELVSWDPELARPL 240
           SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYP+KF+TVDTSYGRALELVSWDPELA+PL
Sbjct: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240

Query: 241 PGLQFPSRELIVDRPLKFNLLRLRKGLNLKRAHQEFLIKFRDLPDICPYKTPASELAKES 300
           P LQ PSRELIVDRPLKFNLLRLRKGLNLKRAHQEFLIKFRDLPD+CPYKTPASELAKES
Sbjct: 241 PCLQVPSRELIVDRPLKFNLLRLRKGLNLKRAHQEFLIKFRDLPDVCPYKTPASELAKES 300

Query: 301 LESEKRACAVVREVLAMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360
           LESEKRACAVVREVL MMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR
Sbjct: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360

Query: 361 DSVFLVEGFDDKGVLMEKDETLAIKNQWVKLLVEGKRVRREKRKAQIYDSKYGNDDENDN 420
           DSVFLVEGFD+KGVL++KDETLAIKNQW+KLL+EGKR+R+EK+KA+ YDSKYGN+ +NDN
Sbjct: 361 DSVFLVEGFDEKGVLVKKDETLAIKNQWMKLLMEGKRMRQEKKKARKYDSKYGNEHKNDN 420

Query: 421 HDHGMGTDYDDDYDDGFESLFQYEDLEFEDEGSDLPINRSNGDFWTTNNVNIINDNDADG 480
           HDH M TD+DDDYDDGFESLFQYEDL+FEDE SDLP N  NGDFW TNNV+IIND D  G
Sbjct: 421 HDHEMETDFDDDYDDGFESLFQYEDLDFEDERSDLPSNWLNGDFWITNNVDIINDADG-G 480

Query: 481 HIEPW 486
            IEPW
Sbjct: 481 RIEPW 484

[Close]

BLAST of Sed0018901 vs. NCBI nr
Match: XP_004152293.1 (protein WHAT'S THIS FACTOR 1, chloroplastic [Cucumis sativus] >XP_031739932.1 protein WHAT'S THIS FACTOR 1, chloroplastic [Cucumis sativus] >KGN53093.1 hypothetical protein Csa_015066 [Cucumis sativus])

HSP 1 Score: 849.4 bits (2193), Expect = 1.6e-242
Identity = 425/485 (87.63%), Postives = 449/485 (92.58%), Query Frame = 0


Query: 1   MALSSHFLTPRDCHVTFLSSNLLLGSPLWLRSNVGYKYQRKGNFKIRYALTPCSSLKIVR 60
           MAL SHFLTP D HVT LSSNLL GSPLWL S V +K QRK NF+  Y LTPCSS+KIVR
Sbjct: 1   MALCSHFLTPTDWHVTSLSSNLLSGSPLWLHSKVDFKCQRKENFRTHYTLTPCSSIKIVR 60

Query: 61  SRSLDRHAVKHNQTRFVQKLIILLLSKPKHFMPLHILSKCRGYLSLPRPRSLISMIHRYP 120
           SRSLDRHAVKHN+TRFVQKLIILLLSKPKH++PLHILSKCRGYLSLPRPRSL+SMIHRYP
Sbjct: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120

Query: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASLAKQDSDLKLAISNTLAEKLQKLLML 180
           SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAAS+AKQDSDLK+ ISN LAEKLQKLLML
Sbjct: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKMVISNKLAEKLQKLLML 180

Query: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPDKFKTVDTSYGRALELVSWDPELARPL 240
           SSHHRILLSKLVHLAPDLS+PPNFRSRLCNDYP+KF+TVDTSYGRALELVSWDPELA+PL
Sbjct: 181 SSHHRILLSKLVHLAPDLSLPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240

Query: 241 PGLQFPSRELIVDRPLKFNLLRLRKGLNLKRAHQEFLIKFRDLPDICPYKTPASELAKES 300
           P +Q PSRELIVDRPLKFNLLRLRKGLNLKR HQEFLIKFRDLPD+CPYK PASELAKES
Sbjct: 241 PCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKNPASELAKES 300

Query: 301 LESEKRACAVVREVLAMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360
           LESEKRACAVVREVL MM+EKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR
Sbjct: 301 LESEKRACAVVREVLGMMVEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360

Query: 361 DSVFLVEGFDDKGVLMEKDETLAIKNQWVKLLVEGKRVRREKRKAQIYDSKYGNDDENDN 420
           DSVFLVEGFDDKGVL+EKDETLAIKNQW+ LL E KR+RREK+KAQIYDSKYGND EN+N
Sbjct: 361 DSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEAKRLRREKKKAQIYDSKYGNDHENNN 420

Query: 421 HDHGMGTDYDDDYDDGFESLFQYEDLEFEDEGSDLPINRSNGDFWTTNNVNIINDNDADG 480
           HDH M  DYDDDYDDGFESLFQYEDL+FEDE S +P   SNGDFWTTNNV+I ND D  G
Sbjct: 421 HDHEMENDYDDDYDDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDADG-G 480

Query: 481 HIEPW 486
           HIEPW
Sbjct: 481 HIEPW 484

[Close]

BLAST of Sed0018901 vs. NCBI nr
Match: XP_022955645.1 (protein WHAT'S THIS FACTOR 1 [Cucurbita moschata] >XP_022955646.1 protein WHAT'S THIS FACTOR 1 [Cucurbita moschata] >KAG7018490.1 Protein ROOT PRIMORDIUM DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 846.7 bits (2186), Expect = 1.0e-241
Identity = 425/485 (87.63%), Postives = 452/485 (93.20%), Query Frame = 0


Query: 1   MALSSHFLTPRDCHVTFLSSNLLLGSPLWLRSNVGYKYQRKGNFKIRYALTPCSSLKIVR 60
           MALSS FLTPRD HVT LSSNLL G+PLWL SNVG KYQRK NFK  Y LTP +S+KIVR
Sbjct: 1   MALSSQFLTPRDWHVTSLSSNLLCGTPLWLHSNVGCKYQRKENFKTCYTLTPRASVKIVR 60

Query: 61  SRSLDRHAVKHNQTRFVQKLIILLLSKPKHFMPLHILSKCRGYLSLPRPRSLISMIHRYP 120
           SR LDRHAVKHN+TRFVQKLIILLLSKPKH++P+HILSKCRGYLSLP+PRSL+SMIHRYP
Sbjct: 61  SRPLDRHAVKHNKTRFVQKLIILLLSKPKHYIPIHILSKCRGYLSLPKPRSLLSMIHRYP 120

Query: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASLAKQDSDLKLAISNTLAEKLQKLLML 180
           SIFELFSIPYPPTPLNATKLYPQLCVRLTP AASLAKQDS+LKL ISNTLAEKLQKLLML
Sbjct: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPVAASLAKQDSNLKLVISNTLAEKLQKLLML 180

Query: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPDKFKTVDTSYGRALELVSWDPELARPL 240
           SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYP+KF+TVDTSYGRALELV WDPELA+PL
Sbjct: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVFWDPELAKPL 240

Query: 241 PGLQFPSRELIVDRPLKFNLLRLRKGLNLKRAHQEFLIKFRDLPDICPYKTPASELAKES 300
           P LQ  SRELIVDRPLKFNLL+LRKGLNLKRAHQEFLIKFRDLPD+CPYKTPASELAKES
Sbjct: 241 PCLQVSSRELIVDRPLKFNLLKLRKGLNLKRAHQEFLIKFRDLPDVCPYKTPASELAKES 300

Query: 301 LESEKRACAVVREVLAMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360
           LESEKRACAVVREVL MMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR
Sbjct: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360

Query: 361 DSVFLVEGFDDKGVLMEKDETLAIKNQWVKLLVEGKRVRREKRKAQIYDSKYGNDDENDN 420
           DSVFLVEGF+DKG L+EKDETLAIKNQW+KLL+EGKR+RREKRKAQIYDS+YGND EN +
Sbjct: 361 DSVFLVEGFNDKGHLIEKDETLAIKNQWMKLLMEGKRMRREKRKAQIYDSRYGNDHENHS 420

Query: 421 HDHGMGTDYDDDYDDGFESLFQYEDLEFEDEGSDLPINRSNGDFWTTNNVNIINDNDADG 480
           HDH M TDYDDDY+DGFESLFQYEDL+FEDE SDLP NRSNGDFWTTNN   I + +  G
Sbjct: 421 HDHEMETDYDDDYEDGFESLFQYEDLDFEDEESDLPSNRSNGDFWTTNNAADIINGENGG 480

Query: 481 HIEPW 486
           HI+PW
Sbjct: 481 HIKPW 485

[Close]

BLAST of Sed0018901 vs. NCBI nr
Match: KAG6582056.1 (Protein WHAT'S THIS FACTOR 1-like, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 843.6 bits (2178), Expect = 8.6e-241
Identity = 425/484 (87.81%), Postives = 451/484 (93.18%), Query Frame = 0


Query: 1   MALSSHFLTPRDCHVTFLSSNLLLGSPLWLRSNVGYKYQRKGNFKIRYALTPCSSLKIVR 60
           MALSS FLTPRD HVT LSSNLL G+PLWL SNVG KYQRK NFK  Y LTP +S+KIVR
Sbjct: 1   MALSSQFLTPRDWHVTSLSSNLLCGTPLWLHSNVGCKYQRKENFKTCYTLTPRASVKIVR 60

Query: 61  SRSLDRHAVKHNQTRFVQKLIILLLSKPKHFMPLHILSKCRGYLSLPRPRSLISMIHRYP 120
           SR LDRHAVKHN+TRFVQKLIILLLSKPKH++P+HILSKCRGYLSLP+PRSL+SMIHRYP
Sbjct: 61  SRPLDRHAVKHNKTRFVQKLIILLLSKPKHYIPIHILSKCRGYLSLPKPRSLLSMIHRYP 120

Query: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASLAKQDSDLKLAISNTLAEKLQKLLML 180
           SIFELFSIPYPPTPLNATKLYPQLCVRLTP AASLAKQDS+LKL ISNTLAEKLQKLLML
Sbjct: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPVAASLAKQDSNLKLVISNTLAEKLQKLLML 180

Query: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPDKFKTVDTSYGRALELVSWDPELARPL 240
           SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYP+KF+TVDTSYGRALELV WDPELA+PL
Sbjct: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVFWDPELAKPL 240

Query: 241 PGLQFPSRELIVDRPLKFNLLRLRKGLNLKRAHQEFLIKFRDLPDICPYKTPASELAKES 300
           P LQ  SRELIVDRPLKFNLL+LRKGLNLKRAHQEFLIKFRDLPD+CPYKTPASELAKES
Sbjct: 241 PCLQVSSRELIVDRPLKFNLLKLRKGLNLKRAHQEFLIKFRDLPDVCPYKTPASELAKES 300

Query: 301 LESEKRACAVVREVLAMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360
           LESEKRACAVVREVL MMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR
Sbjct: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360

Query: 361 DSVFLVEGFDDKGVLMEKDETLAIKNQWVKLLVEGKRVRREKRKAQIYDSKYGNDDENDN 420
           DSVFLVEGF+DKG L+EKDETLAIKNQW+KLL+EGKR+RREKRKAQIYDS+YGND EN +
Sbjct: 361 DSVFLVEGFNDKGHLIEKDETLAIKNQWMKLLMEGKRMRREKRKAQIYDSRYGNDHENHS 420

Query: 421 HDHGMGTDYDDDYDDGFESLFQYEDLEFEDEGSDLPINRSNGDFWTTNNVNIINDNDADG 480
           HDH M TDYDDDY+DGFESLFQYEDL+FEDE SDLP NRSNGDFWTTNN   I + +  G
Sbjct: 421 HDHEMETDYDDDYEDGFESLFQYEDLDFEDEESDLPSNRSNGDFWTTNNAADIINGENGG 480

Query: 481 HIEP 485
           HIEP
Sbjct: 481 HIEP 484

[Close]

BLAST of Sed0018901 vs. NCBI nr
Match: XP_023527715.1 (protein WHAT'S THIS FACTOR 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 842.4 bits (2175), Expect = 1.9e-240
Identity = 428/486 (88.07%), Postives = 455/486 (93.62%), Query Frame = 0


Query: 1   MALSSHFLTPRDCHVTFLSSNLLLGSPLWLRSNVGYKYQRKGNFKIRYALTPCSSLKIVR 60
           MALSS FLTPRD +VT LSSNLL G+ LWL SNVG KYQRK NFK  Y LTP +S+KIVR
Sbjct: 1   MALSSQFLTPRDWYVTPLSSNLLRGTTLWLHSNVGCKYQRKENFKTCYTLTPRASVKIVR 60

Query: 61  SRSLDRHAVKHNQTRFVQKLIILLLSKPKHFMPLHILSKCRGYLSLPRPRSLISMIHRYP 120
           SR LDRHAVKHN+TRFVQKLIILLLSKPKH++P+HILSKCRGYLSLP+PRSL+SMIHRYP
Sbjct: 61  SRPLDRHAVKHNKTRFVQKLIILLLSKPKHYIPIHILSKCRGYLSLPKPRSLLSMIHRYP 120

Query: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASLAKQDSDLKLAISNTLAEKLQKLLML 180
           SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASLAKQDS+LKL ISNTLAEKLQKLLML
Sbjct: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASLAKQDSNLKLVISNTLAEKLQKLLML 180

Query: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPDKFKTVDTSYGRALELVSWDPELARPL 240
           SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYP+KF+TVDTSYGRALELV WDPELA+PL
Sbjct: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVFWDPELAKPL 240

Query: 241 PGLQFPSRELIVDRPLKFNLLRLRKGLNLKRAHQEFLIKFRDLPDICPYKTPASELAKES 300
           P LQ  SRELIVDRPLKFNLL+LRKGLNLKRAHQEFLIKFRDLPD+CPYKTPASELAKES
Sbjct: 241 PCLQVSSRELIVDRPLKFNLLKLRKGLNLKRAHQEFLIKFRDLPDVCPYKTPASELAKES 300

Query: 301 LESEKRACAVVREVLAMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360
           LESEKRACAVVREVL MMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR
Sbjct: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360

Query: 361 DSVFLVEGFDDKGVLMEKDETLAIKNQWVKLLVEGKRVRREKRKAQIYDSKYGNDDENDN 420
           DSVFLVEGF+DKG L+EKDETLAIKNQW+KLL+EGKR+RREKRKAQIYDS+YGND EN +
Sbjct: 361 DSVFLVEGFNDKGHLIEKDETLAIKNQWMKLLMEGKRMRREKRKAQIYDSRYGNDHENYS 420

Query: 421 HDHGMGTDYDDDYDDGFESLFQYEDLEFEDEGSDLPINRSNGDFWTTNN-VNIINDNDAD 480
           HDH M TDYDDDY+DGFESLFQYEDL+FEDE SDLP NRSNGDFWTTNN  +IIND +  
Sbjct: 421 HDHEMETDYDDDYEDGFESLFQYEDLDFEDEESDLPSNRSNGDFWTTNNAADIINDANG- 480

Query: 481 GHIEPW 486
           GHIEPW
Sbjct: 481 GHIEPW 485

[Close]

BLAST of Sed0018901 vs. ExPASy Swiss-Prot
Match: B6TTV8 (Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 1.4e-60
Identity = 162/432 (37.50%), Postives = 228/432 (52.78%), Query Frame = 0


Query: 49  ALTPCSSLKIVRSRSLDRHAVKHNQTRFVQKLIILLLSKPKHFMPLHILSKCRGYLSLPR 108
           A+   +++K  +    D    +  + + V KL  +L+++P   M L  L + R  L L R
Sbjct: 48  AVVAQAAVKRRKEAPFDTVIQRDKKLKLVLKLRNILVAQPDRVMSLRELGRFRRDLGLTR 107

Query: 109 PRSLISMIHRYPSIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASLAKQDSDLKLAISN 168
            R LI+++ R+P +F++              +Y  L  RLTPAA  L   +  L+     
Sbjct: 108 KRRLIALLRRFPGVFDVVE----------EGVY-SLRFRLTPAAERLYLDELRLRNESEG 167

Query: 169 TLAEKLQKLLMLSSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPDKFKTVDTSYGRALE 228
               KL+KLLM+S   RIL+ K+ HL  DL +PP FR  +C  YP  F+ V    G ALE
Sbjct: 168 LAVAKLRKLLMMSQEKRILIEKVAHLKHDLGLPPEFRDTVCLRYPQYFRVVRMDRGPALE 227

Query: 229 LVSWDPELARPLPGL--------QFPSRELIVDRPLKFNLLRLRKGLNLKRAHQEFLIKF 288
           L  WDPELA     L        +   R LI+DRPLKFN +RL KGL L R     + +F
Sbjct: 228 LTHWDPELAVSAAELAEEESRAREAEERNLIIDRPLKFNRVRLPKGLKLTRGEARRIARF 287

Query: 289 RDLPDICPYKTPASELAKESLESEKRACAVVREVLAMMIEKRTLIDHLTHFRKDFGLPNK 348
           +++P I PY    S L   S E EK AC VV E+L++ +EKRTL+DHLTHFR++F     
Sbjct: 288 KEMPYISPY-ADFSHLRSGSDEKEKHACGVVHEILSLTVEKRTLVDHLTHFREEFRFSQS 347

Query: 349 LRGMIVRHPELFYVSLKGQRDSVFLVEGFDDKGVLMEKDETLAIKNQWVKLLVEGKRVRR 408
           LRGMI+RHP++FYVS KG RDSVFL E + D   L+EK++ + +K +   L+     V R
Sbjct: 348 LRGMIIRHPDMFYVSFKGDRDSVFLREAYKD-SQLVEKNQLVLLKEKMRALVA----VPR 407

Query: 409 EKRKAQIYDSKYGNDDENDNHDHGMGTD---YDDDYDDGFESLFQYEDLEFEDEGSDLPI 468
             R+A +     G  +E +  +  + +     D++YDD  E L   EDL  E  G     
Sbjct: 408 FPRRAAV-----GTGEEAEGMNGSLQSRDQVSDEEYDDEDEGLSDMEDLISELSGGKSDA 457

Query: 469 NRSNGDFWTTNN 470
           +   GD W   N
Sbjct: 468 DYEWGDGWFGEN 457

[Close]

BLAST of Sed0018901 vs. ExPASy Swiss-Prot
Match: Q65XL5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 2.7e-59
Identity = 163/443 (36.79%), Postives = 229/443 (51.69%), Query Frame = 0


Query: 47  RYALTPCSSLKIVRSRSLDRHAVKHNQTRFVQKLIILLLSKPKHFMPLHILSKCRGYLSL 106
           R A+   +++K  +    D    +  + + V KL  +L+S P   M L  L + R  L L
Sbjct: 52  RLAVVAQAAVKRRKEIPFDNVIQRDKKLKLVLKLRNILVSNPDRVMSLRDLGRFRRDLGL 111

Query: 107 PRPRSLISMIHRYPSIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASLAKQDSDLKLAI 166
            R R LI+++ R+P +FE+              +Y  L  RLTPAA  L   +  LK   
Sbjct: 112 TRKRRLIALLKRFPGVFEVVE----------EGVY-SLRFRLTPAAERLYLDELHLKNES 171

Query: 167 SNTLAEKLQKLLMLSSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPDKFKTVDTSYGRA 226
                 KL+KLLM+S   RIL+ K+ HL  DL +PP FR  +C  YP  F+ V    G  
Sbjct: 172 EGLAVTKLRKLLMMSQDKRILIEKIAHLKNDLGLPPEFRDTICLRYPQYFRVVQMDRGPG 231

Query: 227 LELVSWDPELARPLPGL--------QFPSRELIVDRPLKFNLLRLRKGLNLKRAHQEFLI 286
           LEL  WDPELA     +        +   R LI+DRPLKFN ++L +GL L R     + 
Sbjct: 232 LELTHWDPELAVSAAEVAEEENRAREEQERNLIIDRPLKFNRVKLPQGLKLSRGEARRVA 291

Query: 287 KFRDLPDICPYKTPASELAKESLESEKRACAVVREVLAMMIEKRTLIDHLTHFRKDFGLP 346
           +F+++P I PY +  S L   S E EK AC VV E+L++ +EKRTL+DHLTHFR++F   
Sbjct: 292 QFKEMPYISPY-SDFSHLRSGSAEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFS 351

Query: 347 NKLRGMIVRHPELFYVSLKGQRDSVFLVEGFDDKGVLMEKDETLAIKNQWVKLLVEGKRV 406
             LRGM++RHP++FYVSLKG RDSVFL E + +   L+EK + + +K +   L+     V
Sbjct: 352 QSLRGMLIRHPDMFYVSLKGDRDSVFLREAYKN-SQLVEKSKLVLLKEKMRALVA----V 411

Query: 407 RREKRKAQIYDSKYGNDDENDNHDHGMGTDYDDDYDDGFESLFQYEDLEFEDEGSDLPIN 466
            R  R+     S+  +           G+D +DD D+G   +   EDL  E  G     +
Sbjct: 412 PRFPRRGVPATSEEADRTNGAAQMLSEGSDVEDDEDEGLSDM---EDLISEISGGKSDTD 471

Query: 467 RSNGDFWTTNNVNIIND-NDADG 481
              GD W   N +   D  D DG
Sbjct: 472 YHWGDGWVGENDDSPPDFEDDDG 474

[Close]

BLAST of Sed0018901 vs. ExPASy Swiss-Prot
Match: A0MFS5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.6e-56
Identity = 163/475 (34.32%), Postives = 244/475 (51.37%), Query Frame = 0


Query: 9   TPRDCHVTFLSSNLLLGSP--LWLRSNVGYKYQRKGNFKIRYALTPC-SSLKIVRSRSLD 68
           T R     F+   L+LG+    W  S            K R  + P  +++K  +  + D
Sbjct: 37  TIRAARSQFMGEGLILGNKYGFWSTSR-----------KTRVVVEPVRAAVKRRKELTFD 96

Query: 69  RHAVKHNQTRFVQKLIILLLSKPKHFMPLHILSKCRGYLSLPRPRSLISMIHRYPSIFEL 128
               +  + + V  +  +L+S+P   M L  L K R  L L + R  I+++ +YP +FE+
Sbjct: 97  SVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFIALLRKYPGVFEI 156

Query: 129 FSIPYPPTPLNATKLYPQLCVRLTPAAASLAKQDSDLKLAISNTLAEKLQKLLMLSSHHR 188
                        +    L  ++T  A  L   +  ++  + + L  KL+KL+M+S   R
Sbjct: 157 -----------VEEGAYSLRFKMTSEAERLYLDEMRIRNELEDVLVVKLRKLVMMSIDKR 216

Query: 189 ILLSKLVHLAPDLSMPPNFRSRLCNDYPDKFKTVDTSYGRALELVSWDPELARPLPGL-- 248
           ILL K+ HL  DL +P  FR  +C  YP  F+ V T  G ALEL  WDPELA     L  
Sbjct: 217 ILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTPRGPALELTHWDPELAVSAAELSE 276

Query: 249 ------QFPSRELIVDRPLKFNLLRLRKGLNLKRAHQEFLIKFRDLPDICPYKTPASELA 308
                 +   R LI+DRP KFN ++L +GLNL ++    + +FRD+  I PYK   S L 
Sbjct: 277 DDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQYISPYK-DFSHLR 336

Query: 309 KESLESEKRACAVVREVLAMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLK 368
             +LE EK AC V+ E+L++  EKRTL+DHLTHFR++F    +LRGM++RHP+LFYVSLK
Sbjct: 337 SGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDLFYVSLK 396

Query: 369 GQRDSVFLVEGFDDKGVLMEKDETLAIKNQWVKLLVE--------GKRVRREKRKAQIYD 428
           G+RDSVFL E + +   L++KD    +K + ++ LV         G R   E R+ +I  
Sbjct: 397 GERDSVFLREAYRN-SELIDKDPLTLVKEK-MRALVSVPRFPRRGGPRKDEEGREVEIDG 456

Query: 429 SKYGNDDENDNHDHGMGTDYDDDYDDGFESLFQYEDLEFEDEG-SDLPINRSNGD 464
           S    ++E +  D    +D  D Y +G +     +    +DEG  D+P N  + D
Sbjct: 457 SDADGEEEEEESDAEEWSDV-DGYLEGEDGGNDDDGDWTDDEGEEDVPPNFDDDD 485

[Close]

BLAST of Sed0018901 vs. ExPASy Swiss-Prot
Match: Q689D6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 3.0e-18
Identity = 88/375 (23.47%), Postives = 178/375 (47.47%), Query Frame = 0


Query: 59  VRSRSLDRHAVKHNQTRFVQKLIILLLSKPKHFMPLHILSKCRGYLSLP-RPRSLISMIH 118
           VR    D +     + R V K   L+LS+P H + + +L      L L  +     + + 
Sbjct: 47  VRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARRLGLGFKQHEPGAFLL 106

Query: 119 RYPSIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASLAKQDSDLKLAISNTLAEKLQKL 178
           ++P +FE++  P          +   L  RLT  A    + + +  L        +L+KL
Sbjct: 107 KFPHVFEIYEHP----------VQRILYCRLTRKALDQIRHEHEAVLDQIPDAVTRLRKL 166

Query: 179 LMLSSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPDKFKTVD--TSYGRALELVSWDPE 238
           +M+S+  RI L  +     +  +P +F   +   +P  F+ +D   +  + +E+V  DP 
Sbjct: 167 VMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKDPN 226

Query: 239 LA----RPLPGLQFPSRELIVDRPLKFNLLRLRKGLNLKRAHQEFLIKFRDLPDICPYKT 298
           L+      +  +++ ++ +  +      ++    G  + +  +  + K++ LP   PY+ 
Sbjct: 227 LSICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPYE- 286

Query: 299 PASELAKESLES----EKRACAVVREVLAMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVR 358
             S     S+E+    EKR+ A + E+L++ +EK+  ++ + HFR    LP KL+  +++
Sbjct: 287 DISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQ 346

Query: 359 HPELFYVSLK---GQRDSVFLVEGFDDKGVLMEKDETLAIKNQWVKLLVEGKRVRREKRK 418
           H  +FY+S +   G+  +VFL EG+  +G L+E ++    + +  +L++     R+ K  
Sbjct: 347 HQGIFYISTRGNYGKLHTVFLREGY-KRGELVEPNDVYLARRRLAELVLMSP--RKAKVD 406

Query: 419 AQIYDSKYGNDDEND 420
           A++   + G DDE+D
Sbjct: 407 AELVRYRDGLDDEDD 407

[Close]

BLAST of Sed0018901 vs. ExPASy Swiss-Prot
Match: Q9ZUZ6 (Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 1.1e-17
Identity = 82/347 (23.63%), Postives = 160/347 (46.11%), Query Frame = 0


Query: 67  HAVKHNQTRFVQKLIILLLSKPKHFMPLHILSKCRGYLSLPRPRSLISMIHRYPSIFELF 126
           H ++ +Q + V  L   ++ +P   +P+  +SK      +     +   + ++PSIFE F
Sbjct: 42  HILRSSQLKSVVSLKNCIVQEPNRCIPISAISKKTRQFDV--STKIAHFLRKFPSIFEEF 101

Query: 127 SIPYPPTPLNATKLYPQLCVRLTPAAASLAKQDSDLKLAISNTLAEKLQKLLMLSSHHRI 186
             P    P            RLTP A  L +Q+  +    ++ L ++L+KL+++S  + +
Sbjct: 102 VGPEYNLP----------WFRLTPEATELDRQERVVYQTSADDLRDRLKKLILMSKDNVL 161

Query: 187 LLSKLVHLAPDLSMPPNFRSRLCNDYPDKFKTVDTS---YGRALELVSWDPELARPLPGL 246
            LS +  +   L +P ++      +    F+ VD      G A++    D  L+      
Sbjct: 162 PLSIVQGMKWYLGLPDDYLQFPDMNLDSSFRFVDMEDGVKGLAVDYNGGDKVLSVLQKNA 221

Query: 247 QFPSRELIVDRPLKFNLLRLRKGLNLKRAHQEFLIKFRDLPDICPYK-----TPASELAK 306
               R  +    ++F L    KG  L+   +++L++F+ LP + PY       P+S++A 
Sbjct: 222 MKKRRGEVSLEEIEFPLFP-SKGCRLRVKIEDWLMEFQKLPYVSPYDDYSCLDPSSDIA- 281

Query: 307 ESLESEKRACAVVREVLAMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKG 366
                EKR    + E+L + +E       L   +K FGLP K+     RHP++FY+S+K 
Sbjct: 282 -----EKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLPQKVHKAFERHPQIFYLSMKN 341

Query: 367 QRDSVFLVEGFDDKGVLMEKDETLAIKNQWVKLLVEGKRVRREKRKA 406
           +  +  L E + DK   +E    L ++ ++++L+   + + + +R +
Sbjct: 342 KTCTAILREPYRDK-ASVETHPVLGVRKKYIQLMKNSELILKSRRNS 368

[Close]

BLAST of Sed0018901 vs. ExPASy TrEMBL
Match: A0A0A0KU86 (PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G015830 PE=4 SV=1)

HSP 1 Score: 849.4 bits (2193), Expect = 7.6e-243
Identity = 425/485 (87.63%), Postives = 449/485 (92.58%), Query Frame = 0


Query: 1   MALSSHFLTPRDCHVTFLSSNLLLGSPLWLRSNVGYKYQRKGNFKIRYALTPCSSLKIVR 60
           MAL SHFLTP D HVT LSSNLL GSPLWL S V +K QRK NF+  Y LTPCSS+KIVR
Sbjct: 1   MALCSHFLTPTDWHVTSLSSNLLSGSPLWLHSKVDFKCQRKENFRTHYTLTPCSSIKIVR 60

Query: 61  SRSLDRHAVKHNQTRFVQKLIILLLSKPKHFMPLHILSKCRGYLSLPRPRSLISMIHRYP 120
           SRSLDRHAVKHN+TRFVQKLIILLLSKPKH++PLHILSKCRGYLSLPRPRSL+SMIHRYP
Sbjct: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120

Query: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASLAKQDSDLKLAISNTLAEKLQKLLML 180
           SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAAS+AKQDSDLK+ ISN LAEKLQKLLML
Sbjct: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKMVISNKLAEKLQKLLML 180

Query: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPDKFKTVDTSYGRALELVSWDPELARPL 240
           SSHHRILLSKLVHLAPDLS+PPNFRSRLCNDYP+KF+TVDTSYGRALELVSWDPELA+PL
Sbjct: 181 SSHHRILLSKLVHLAPDLSLPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240

Query: 241 PGLQFPSRELIVDRPLKFNLLRLRKGLNLKRAHQEFLIKFRDLPDICPYKTPASELAKES 300
           P +Q PSRELIVDRPLKFNLLRLRKGLNLKR HQEFLIKFRDLPD+CPYK PASELAKES
Sbjct: 241 PCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKNPASELAKES 300

Query: 301 LESEKRACAVVREVLAMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360
           LESEKRACAVVREVL MM+EKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR
Sbjct: 301 LESEKRACAVVREVLGMMVEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360

Query: 361 DSVFLVEGFDDKGVLMEKDETLAIKNQWVKLLVEGKRVRREKRKAQIYDSKYGNDDENDN 420
           DSVFLVEGFDDKGVL+EKDETLAIKNQW+ LL E KR+RREK+KAQIYDSKYGND EN+N
Sbjct: 361 DSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEAKRLRREKKKAQIYDSKYGNDHENNN 420

Query: 421 HDHGMGTDYDDDYDDGFESLFQYEDLEFEDEGSDLPINRSNGDFWTTNNVNIINDNDADG 480
           HDH M  DYDDDYDDGFESLFQYEDL+FEDE S +P   SNGDFWTTNNV+I ND D  G
Sbjct: 421 HDHEMENDYDDDYDDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDADG-G 480

Query: 481 HIEPW 486
           HIEPW
Sbjct: 481 HIEPW 484

[Close]

BLAST of Sed0018901 vs. ExPASy TrEMBL
Match: A0A6J1GVP1 (protein WHAT'S THIS FACTOR 1 OS=Cucurbita moschata OX=3662 GN=LOC111457587 PE=4 SV=1)

HSP 1 Score: 846.7 bits (2186), Expect = 4.9e-242
Identity = 425/485 (87.63%), Postives = 452/485 (93.20%), Query Frame = 0


Query: 1   MALSSHFLTPRDCHVTFLSSNLLLGSPLWLRSNVGYKYQRKGNFKIRYALTPCSSLKIVR 60
           MALSS FLTPRD HVT LSSNLL G+PLWL SNVG KYQRK NFK  Y LTP +S+KIVR
Sbjct: 1   MALSSQFLTPRDWHVTSLSSNLLCGTPLWLHSNVGCKYQRKENFKTCYTLTPRASVKIVR 60

Query: 61  SRSLDRHAVKHNQTRFVQKLIILLLSKPKHFMPLHILSKCRGYLSLPRPRSLISMIHRYP 120
           SR LDRHAVKHN+TRFVQKLIILLLSKPKH++P+HILSKCRGYLSLP+PRSL+SMIHRYP
Sbjct: 61  SRPLDRHAVKHNKTRFVQKLIILLLSKPKHYIPIHILSKCRGYLSLPKPRSLLSMIHRYP 120

Query: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASLAKQDSDLKLAISNTLAEKLQKLLML 180
           SIFELFSIPYPPTPLNATKLYPQLCVRLTP AASLAKQDS+LKL ISNTLAEKLQKLLML
Sbjct: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPVAASLAKQDSNLKLVISNTLAEKLQKLLML 180

Query: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPDKFKTVDTSYGRALELVSWDPELARPL 240
           SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYP+KF+TVDTSYGRALELV WDPELA+PL
Sbjct: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVFWDPELAKPL 240

Query: 241 PGLQFPSRELIVDRPLKFNLLRLRKGLNLKRAHQEFLIKFRDLPDICPYKTPASELAKES 300
           P LQ  SRELIVDRPLKFNLL+LRKGLNLKRAHQEFLIKFRDLPD+CPYKTPASELAKES
Sbjct: 241 PCLQVSSRELIVDRPLKFNLLKLRKGLNLKRAHQEFLIKFRDLPDVCPYKTPASELAKES 300

Query: 301 LESEKRACAVVREVLAMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360
           LESEKRACAVVREVL MMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR
Sbjct: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360

Query: 361 DSVFLVEGFDDKGVLMEKDETLAIKNQWVKLLVEGKRVRREKRKAQIYDSKYGNDDENDN 420
           DSVFLVEGF+DKG L+EKDETLAIKNQW+KLL+EGKR+RREKRKAQIYDS+YGND EN +
Sbjct: 361 DSVFLVEGFNDKGHLIEKDETLAIKNQWMKLLMEGKRMRREKRKAQIYDSRYGNDHENHS 420

Query: 421 HDHGMGTDYDDDYDDGFESLFQYEDLEFEDEGSDLPINRSNGDFWTTNNVNIINDNDADG 480
           HDH M TDYDDDY+DGFESLFQYEDL+FEDE SDLP NRSNGDFWTTNN   I + +  G
Sbjct: 421 HDHEMETDYDDDYEDGFESLFQYEDLDFEDEESDLPSNRSNGDFWTTNNAADIINGENGG 480

Query: 481 HIEPW 486
           HI+PW
Sbjct: 481 HIKPW 485

[Close]

BLAST of Sed0018901 vs. ExPASy TrEMBL
Match: A0A6J1IUA5 (protein WHAT'S THIS FACTOR 1 OS=Cucurbita maxima OX=3661 GN=LOC111479376 PE=4 SV=1)

HSP 1 Score: 841.3 bits (2172), Expect = 2.1e-240
Identity = 423/485 (87.22%), Postives = 450/485 (92.78%), Query Frame = 0


Query: 1   MALSSHFLTPRDCHVTFLSSNLLLGSPLWLRSNVGYKYQRKGNFKIRYALTPCSSLKIVR 60
           MALSS FLTPRD HVT  SSNLL G+PLWL SNVG KYQRK NF+  Y LTP +S+KIVR
Sbjct: 1   MALSSQFLTPRDWHVTSRSSNLLRGTPLWLHSNVGCKYQRKENFETSYTLTPRASVKIVR 60

Query: 61  SRSLDRHAVKHNQTRFVQKLIILLLSKPKHFMPLHILSKCRGYLSLPRPRSLISMIHRYP 120
           S  LDRHAVKHN+TRFVQKLIILLLSKPKH++P+HILSKCRGYLSLP+PRSL+SMIHRYP
Sbjct: 61  SCPLDRHAVKHNKTRFVQKLIILLLSKPKHYIPIHILSKCRGYLSLPKPRSLLSMIHRYP 120

Query: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASLAKQDSDLKLAISNTLAEKLQKLLML 180
           SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASLAKQDS+LKL ISNTLAEKLQKLLML
Sbjct: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASLAKQDSNLKLVISNTLAEKLQKLLML 180

Query: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPDKFKTVDTSYGRALELVSWDPELARPL 240
           SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYP+KF+TVDTSYGRALELV WDPELA+ L
Sbjct: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVFWDPELAKTL 240

Query: 241 PGLQFPSRELIVDRPLKFNLLRLRKGLNLKRAHQEFLIKFRDLPDICPYKTPASELAKES 300
           P LQ  SRELIVDRPLKFNLL+LRKGLNLKRAHQEFLIKFRDLPD+CPYKTPASELAKES
Sbjct: 241 PCLQVSSRELIVDRPLKFNLLKLRKGLNLKRAHQEFLIKFRDLPDVCPYKTPASELAKES 300

Query: 301 LESEKRACAVVREVLAMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360
           LESEKRACAVVREVL MMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR
Sbjct: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360

Query: 361 DSVFLVEGFDDKGVLMEKDETLAIKNQWVKLLVEGKRVRREKRKAQIYDSKYGNDDENDN 420
           DSVFLVEGF+DKG L+EKDETLAIKNQW+KLL+EGKR+RREKRKAQIYDS+YGND EN +
Sbjct: 361 DSVFLVEGFNDKGHLIEKDETLAIKNQWMKLLMEGKRMRREKRKAQIYDSRYGNDHENHS 420

Query: 421 HDHGMGTDYDDDYDDGFESLFQYEDLEFEDEGSDLPINRSNGDFWTTNNVNIINDNDADG 480
           HDH M TDYDDDY+DGFESLFQYEDL+FEDE SDLP NRSNGDFWTTNN   I + +  G
Sbjct: 421 HDHEMETDYDDDYEDGFESLFQYEDLDFEDEESDLPSNRSNGDFWTTNNAADITNGENGG 480

Query: 481 HIEPW 486
           HIEPW
Sbjct: 481 HIEPW 485

[Close]

BLAST of Sed0018901 vs. ExPASy TrEMBL
Match: A0A1S3BYB2 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103494529 PE=4 SV=1)

HSP 1 Score: 840.5 bits (2170), Expect = 3.5e-240
Identity = 425/485 (87.63%), Postives = 448/485 (92.37%), Query Frame = 0


Query: 1   MALSSHFLTPRDCHVTFLSSNLLLGSPLWLRSNVGYKYQRKGNFKIRYALTPCSSLKIVR 60
           MALSSHFLTP D H + LSSNLL GSPLWL S V  K QRK NF   Y LTPCSS+KIVR
Sbjct: 1   MALSSHFLTPADWHAS-LSSNLLSGSPLWLHSKVDLKCQRKENFITHYTLTPCSSIKIVR 60

Query: 61  SRSLDRHAVKHNQTRFVQKLIILLLSKPKHFMPLHILSKCRGYLSLPRPRSLISMIHRYP 120
           SRSLDRHAVKHN+TRFVQKLIILLLSKPKH++PLHILSKCRGYLSLPRPRSL+SMIHRYP
Sbjct: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120

Query: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASLAKQDSDLKLAISNTLAEKLQKLLML 180
           SIFELFSIPYPPTPLNATKLYPQLCVRLT AAAS+AKQDSDLKL ISNTLAEKLQKLLML
Sbjct: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTAAAASIAKQDSDLKLVISNTLAEKLQKLLML 180

Query: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPDKFKTVDTSYGRALELVSWDPELARPL 240
           SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYP+KF+TVDTSYGRALELVSWDPELA+PL
Sbjct: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240

Query: 241 PGLQFPSRELIVDRPLKFNLLRLRKGLNLKRAHQEFLIKFRDLPDICPYKTPASELAKES 300
           P +Q PSRELIVDRPLKFNLLRLRKGLNLKR HQEFLIKFRDLPD+CPYKTPASELAKES
Sbjct: 241 PCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKTPASELAKES 300

Query: 301 LESEKRACAVVREVLAMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360
           LESEKRACAVVREVL MMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR
Sbjct: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360

Query: 361 DSVFLVEGFDDKGVLMEKDETLAIKNQWVKLLVEGKRVRREKRKAQIYDSKYGNDDENDN 420
           DSVFLVEGFDDKG L+EKDETLAIKN+W+ LL EGKR+RREK+KAQIYDSKYGND EN+N
Sbjct: 361 DSVFLVEGFDDKGALLEKDETLAIKNRWMALLKEGKRMRREKKKAQIYDSKYGNDHENNN 420

Query: 421 HDHGMGTDYDDDYDDGFESLFQYEDLEFEDEGSDLPINRSNGDFWTTNNVNIINDNDADG 480
           HDH M  DYDD+YDDGFESLFQYEDL+FEDE S +P   SNGDFWTTNNV+I ND D + 
Sbjct: 421 HDHEMENDYDDNYDDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDTD-ES 480

Query: 481 HIEPW 486
           HIEPW
Sbjct: 481 HIEPW 483

[Close]

BLAST of Sed0018901 vs. ExPASy TrEMBL
Match: A0A5D3D0F7 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001190 PE=4 SV=1)

HSP 1 Score: 840.5 bits (2170), Expect = 3.5e-240
Identity = 425/485 (87.63%), Postives = 448/485 (92.37%), Query Frame = 0


Query: 1   MALSSHFLTPRDCHVTFLSSNLLLGSPLWLRSNVGYKYQRKGNFKIRYALTPCSSLKIVR 60
           MALSSHFLTP D H + LSSNLL GSPLWL S V  K QRK NF   Y LTPCSS+KIVR
Sbjct: 1   MALSSHFLTPADWHAS-LSSNLLSGSPLWLHSKVDLKCQRKENFITHYTLTPCSSIKIVR 60

Query: 61  SRSLDRHAVKHNQTRFVQKLIILLLSKPKHFMPLHILSKCRGYLSLPRPRSLISMIHRYP 120
           SRSLDRHAVKHN+TRFVQKLIILLLSKPKH++PLHILSKCRGYLSLPRPRSL+SMIHRYP
Sbjct: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120

Query: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASLAKQDSDLKLAISNTLAEKLQKLLML 180
           SIFELFSIPYPPTPLNATKLYPQLCVRLT AAAS+AKQDSDLKL ISNTLAEKLQKLLML
Sbjct: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTAAAASIAKQDSDLKLVISNTLAEKLQKLLML 180

Query: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPDKFKTVDTSYGRALELVSWDPELARPL 240
           SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYP+KF+TVDTSYGRALELVSWDPELA+PL
Sbjct: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240

Query: 241 PGLQFPSRELIVDRPLKFNLLRLRKGLNLKRAHQEFLIKFRDLPDICPYKTPASELAKES 300
           P +Q PSRELIVDRPLKFNLLRLRKGLNLKR HQEFLIKFRDLPD+CPYKTPASELAKES
Sbjct: 241 PCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKTPASELAKES 300

Query: 301 LESEKRACAVVREVLAMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360
           LESEKRACAVVREVL MMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR
Sbjct: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360

Query: 361 DSVFLVEGFDDKGVLMEKDETLAIKNQWVKLLVEGKRVRREKRKAQIYDSKYGNDDENDN 420
           DSVFLVEGFDDKG L+EKDETLAIKN+W+ LL EGKR+RREK+KAQIYDSKYGND EN+N
Sbjct: 361 DSVFLVEGFDDKGALLEKDETLAIKNRWMALLKEGKRMRREKKKAQIYDSKYGNDHENNN 420

Query: 421 HDHGMGTDYDDDYDDGFESLFQYEDLEFEDEGSDLPINRSNGDFWTTNNVNIINDNDADG 480
           HDH M  DYDD+YDDGFESLFQYEDL+FEDE S +P   SNGDFWTTNNV+I ND D + 
Sbjct: 421 HDHEMENDYDDNYDDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNVDISNDTD-ES 480

Query: 481 HIEPW 486
           HIEPW
Sbjct: 481 HIEPW 483

[Close]

BLAST of Sed0018901 vs. TAIR 10
Match: AT5G62990.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 504.2 bits (1297), Expect = 1.2e-142
Identity = 284/498 (57.03%), Postives = 354/498 (71.08%), Query Frame = 0


Query: 1   MALSSHFLTPRDCHVTFLSSNLLLGS-PLWL-RSNVGYKYQRK--GNFKIRYALTPCSSL 60
           MAL+   L P      F  S+  L S PL + RSNV  K   K  G+  +  +   CS+ 
Sbjct: 3   MALTQ--LVPSSPEKLFCFSSFFLPSIPLEIRRSNVTTKTSSKKLGSLSLNIS---CSAH 62

Query: 61  KIVRSRSLDRHAVKHNQTRFVQKLIILLLSKPKHFMPLHILSKCRGYLSLPRPRSLISMI 120
           KIVRS SLDRH VK N+ RFVQKL  LLLSKPKH++P+ IL KCR YL +  P +++SMI
Sbjct: 63  KIVRSPSLDRHVVKQNRVRFVQKLNTLLLSKPKHYIPIEILYKCRSYLCIENPLAILSMI 122

Query: 121 HRYPSIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASLAKQDSDLKLAISNTLAEKLQK 180
            RYP+IFELF+ P P  P+NATK   QLCVRLT AA+SLA Q+ +LK  IS+ LA KLQK
Sbjct: 123 RRYPTIFELFTTPTPHLPMNATKPLSQLCVRLTSAASSLAMQELNLKSEISDKLATKLQK 182

Query: 181 LLMLSSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPDKFKTVDTSYGRALELVSWDPEL 240
           LLMLSSH R+LLSKLVH+APD   PPNFRSRLCNDYPDKFKTVDTSYGRALELVS DPEL
Sbjct: 183 LLMLSSHRRLLLSKLVHIAPDFGFPPNFRSRLCNDYPDKFKTVDTSYGRALELVSSDPEL 242

Query: 241 ARPLPGLQFPSRELIVDRPLKFNLLRLRKGLNLKRAHQEFLIKFRDLPDICPYKTPASEL 300
           A  +P  +   R LIVDRPLKF  L LR+GLNLKR HQ FLIKFR+ PD+CPYK  +  L
Sbjct: 243 ANQMPSPEV-DRGLIVDRPLKFKRLNLRRGLNLKRRHQGFLIKFRESPDVCPYKMSSDYL 302

Query: 301 AKESLESEKRACAVVREVLAMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSL 360
           A ES+E+EKRACAVVREVL + +EKRTLIDHLTHFRK+F LPNKLR +IVRHPELFYVS+
Sbjct: 303 ASESIEAEKRACAVVREVLGLTVEKRTLIDHLTHFRKEFSLPNKLRDLIVRHPELFYVSI 362

Query: 361 KGQRDSVFLVEGFDDKGVLMEKDETLAIKNQWVKLLVEGKRVRREKRK--AQIYDSKYGN 420
           KG RDSVFLVE ++D G L++KDE L I+ + + L+ EGKR+RRE+R+  A + D     
Sbjct: 363 KGMRDSVFLVEAYNDNGDLLDKDERLVIRERLIDLIQEGKRIRRERRRKGATLGDKSVEE 422

Query: 421 DDENDNHDHGMGTDYDDDYDDGFESLFQYEDL------EFEDEGSDLPINRSNGDFWTTN 480
             ++D       +D DD+Y+DGFE+LF  EDL      + ED+  +  +N  + ++W+  
Sbjct: 423 KRKDDETIDDYDSDLDDEYEDGFENLFDSEDLGVEYHFDEEDDDDEAGVNGESVEYWSRK 482

Query: 481 -NVNIINDNDADGHIEPW 486
            + +  + ++A+  +E W
Sbjct: 483 LSSSGSSSDEANSAVESW 494

[Close]

BLAST of Sed0018901 vs. TAIR 10
Match: AT4G01037.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 221.9 bits (564), Expect = 1.1e-57
Identity = 163/475 (34.32%), Postives = 244/475 (51.37%), Query Frame = 0


Query: 9   TPRDCHVTFLSSNLLLGSP--LWLRSNVGYKYQRKGNFKIRYALTPC-SSLKIVRSRSLD 68
           T R     F+   L+LG+    W  S            K R  + P  +++K  +  + D
Sbjct: 37  TIRAARSQFMGEGLILGNKYGFWSTSR-----------KTRVVVEPVRAAVKRRKELTFD 96

Query: 69  RHAVKHNQTRFVQKLIILLLSKPKHFMPLHILSKCRGYLSLPRPRSLISMIHRYPSIFEL 128
               +  + + V  +  +L+S+P   M L  L K R  L L + R  I+++ +YP +FE+
Sbjct: 97  SVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFIALLRKYPGVFEI 156

Query: 129 FSIPYPPTPLNATKLYPQLCVRLTPAAASLAKQDSDLKLAISNTLAEKLQKLLMLSSHHR 188
                        +    L  ++T  A  L   +  ++  + + L  KL+KL+M+S   R
Sbjct: 157 -----------VEEGAYSLRFKMTSEAERLYLDEMRIRNELEDVLVVKLRKLVMMSIDKR 216

Query: 189 ILLSKLVHLAPDLSMPPNFRSRLCNDYPDKFKTVDTSYGRALELVSWDPELARPLPGL-- 248
           ILL K+ HL  DL +P  FR  +C  YP  F+ V T  G ALEL  WDPELA     L  
Sbjct: 217 ILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTPRGPALELTHWDPELAVSAAELSE 276

Query: 249 ------QFPSRELIVDRPLKFNLLRLRKGLNLKRAHQEFLIKFRDLPDICPYKTPASELA 308
                 +   R LI+DRP KFN ++L +GLNL ++    + +FRD+  I PYK   S L 
Sbjct: 277 DDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQYISPYK-DFSHLR 336

Query: 309 KESLESEKRACAVVREVLAMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLK 368
             +LE EK AC V+ E+L++  EKRTL+DHLTHFR++F    +LRGM++RHP+LFYVSLK
Sbjct: 337 SGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDLFYVSLK 396

Query: 369 GQRDSVFLVEGFDDKGVLMEKDETLAIKNQWVKLLVE--------GKRVRREKRKAQIYD 428
           G+RDSVFL E + +   L++KD    +K + ++ LV         G R   E R+ +I  
Sbjct: 397 GERDSVFLREAYRN-SELIDKDPLTLVKEK-MRALVSVPRFPRRGGPRKDEEGREVEIDG 456

Query: 429 SKYGNDDENDNHDHGMGTDYDDDYDDGFESLFQYEDLEFEDEG-SDLPINRSNGD 464
           S    ++E +  D    +D  D Y +G +     +    +DEG  D+P N  + D
Sbjct: 457 SDADGEEEEEESDAEEWSDV-DGYLEGEDGGNDDDGDWTDDEGEEDVPPNFDDDD 485

[Close]

BLAST of Sed0018901 vs. TAIR 10
Match: AT5G48040.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 128.3 bits (321), Expect = 1.7e-29
Identity = 115/388 (29.64%), Postives = 180/388 (46.39%), Query Frame = 0


Query: 56  LKIVRSRSLDRHAVKHNQTRFVQKLIILLLSKPKHFMPLHILSKCRGYLSLPRPRSLISM 115
           LK V+ R LD   V+    R V  L+ ++ + P   +P+  L   RG L LP+   L + 
Sbjct: 37  LKWVKDRELDAVVVREKHLRAVCNLVSVISASPDLRLPIFKLLPHRGQLGLPQELKLSAF 96

Query: 116 IHRYPSIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASLAKQDSDLKLAISNTLAEKLQ 175
           I RYP+IF    + +       T +    C  LT     L  ++ D+       +  +L 
Sbjct: 97  IRRYPNIF----VEHCYWDSAGTSV---PCFGLTRETIDLYYEEVDVSRVNERDVLVRLC 156

Query: 176 KLLMLSSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPDKFKTVDTSYG-RALELVSWDP 235
           KLLML+    + L  + HL  DL +P ++R  L   +PD F  V  S     L+L+ WD 
Sbjct: 157 KLLMLTCERTLSLHSIDHLRWDLGLPYDYRDSLITKHPDLFSLVKLSSDLDGLKLIHWDE 216

Query: 236 ELARPLPGLQFPSRELIVDRPLKFNLLRLRKGLNLKRAHQEFLIKFRDLPDICPYKTPAS 295
            LA      Q   RE + +       ++  +G  LKR   E+L +++ LP   PY   AS
Sbjct: 217 HLAVS----QMQLREDVGNDERMAFPVKFTRGFGLKRKSIEWLQEWQRLPYTSPY-VDAS 276

Query: 296 ELAKESLESEKRACAVVREVLAMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYV 355
            L   +  SEKR   V  E+L + I K+T   ++++ RK F LP K   +  RHP +FY+
Sbjct: 277 HLDPRTDLSEKRNVGVFHELLHLTIGKKTERKNVSNLRKPFALPQKFTKVFERHPGIFYI 336

Query: 356 SLKGQRDSVFLVEGFDDKGVLMEKDETLAIKNQWVKLLVEG----------KRVRREKRK 415
           S+K    +V L E +D +  L+EK   + ++ ++  ++ EG          K V  +  K
Sbjct: 337 SMKCDTQTVILREAYDRRH-LIEKHPLVEVREKFANMMNEGFLDRSRGLYQKSVEADLEK 396

Query: 416 AQIYDSKYGNDDENDNHDHGMGTDYDDD 433
             I  S     DE +  D+ + + YD D
Sbjct: 397 NNIKTSYPVWSDEEEELDNNLISGYDSD 411

[Close]

BLAST of Sed0018901 vs. TAIR 10
Match: AT5G21970.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 125.2 bits (313), Expect = 1.5e-28
Identity = 118/416 (28.37%), Postives = 194/416 (46.63%), Query Frame = 0


Query: 54  SSLKIVRSRSLDRHA----VKHNQTRFVQKLIIL---LLSKPKHFMPLHILSKCRGYLSL 113
           +S K V+ RS ++      +   + +   K+I L   L  +    M +    + R  ++L
Sbjct: 44  TSSKRVQDRSREKRVQELEIATEKWKIASKVIFLMEVLKGERDMIMTVRSFEQYRRQINL 103

Query: 114 PRPRSLISMIHRYPSIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASLAKQDSDLKLAI 173
           P+P  +   I + P +FEL+                 L   LT     L  +   L    
Sbjct: 104 PKPHKISDFIRKSPKLFELYK-----------DQRGVLWCGLTEGGEDLLDEHDKLLEEN 163

Query: 174 SNTLAEKLQKLLMLSSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPDKFKTVDTSYGRA 233
            +  AE + + LM+S   ++ L K+VH   D  +P +FR     ++P  FK V    G  
Sbjct: 164 GDKAAEHVTRCLMMSVDKKLPLDKIVHFRRDFGLPLDFRINWVYNFPQHFKVVKLGDGEE 223

Query: 234 -LELVSWDPELARPLPGLQFPSRELIVDRPLKFNLLRLRKGLNLKRAHQEF------LIK 293
            LELVSW+P  A  +  L+  +  +  D   K  +L L   +    ++++       +  
Sbjct: 224 YLELVSWNPAWA--ITELEKKTLGITEDCEHKPGMLSLAFPMKFPPSYKKMYRYRGKIEH 283

Query: 294 FRDLPDICPYKTPASELAKESLESEKRACAVVREVLAMMIEKRTLIDHLTHFRKDFGLPN 353
           F+    + PY   A  L   S E +KRA AV+ E+L+  +EKR + DHLTHFR++F +P 
Sbjct: 284 FQKRSYLSPY-ADARGLEAGSKEFDKRAIAVMHELLSFTLEKRLVTDHLTHFRREFVMPQ 343

Query: 354 KLRGMIVRHPELFYVSLKGQRDSVFLVEGFDDKGVLMEKDETLAIKNQWVKLLVEGKRVR 413
           KL  + ++H  +FYVS +G+R SVFL EG++    L+EK   +     W + L++    R
Sbjct: 344 KLMRIFLKHCGIFYVSERGKRFSVFLTEGYEGP-ELIEKCPLIL----WKEKLLKFTGYR 403

Query: 414 REKRKAQIYDSKYGNDDENDNHDHGMGTDYDDDYDDGFESLFQYEDLEFEDEGSDL 456
             KR  Q Y     + +E +  + G G   D+D   GFE    Y+D+  +D+  D+
Sbjct: 404 GRKRDIQTYSDTL-DMEERELLESGSG---DEDLSVGFEKDGDYDDVVTDDDEMDI 436

[Close]

BLAST of Sed0018901 vs. TAIR 10
Match: AT3G63090.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 124.4 bits (311), Expect = 2.5e-28
Identity = 107/359 (29.81%), Postives = 179/359 (49.86%), Query Frame = 0


Query: 54  SSLKIV--RSRSLDRHAVKHNQTRFVQKLIILLLSKPKHFMPLHILSKCRGYLSLP-RPR 113
           SSLK+V  +   LD    +  + +   +++  +L++P   +PL  L K R  L L  + +
Sbjct: 32  SSLKVVWKKDTRLDEAIEQDKRYKLCARVVKEVLNEPGQVIPLRYLEKRRERLRLTFKAK 91

Query: 114 SLISMIHRYPSIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASLAKQDSDLKLAISNTL 173
           S + M    PS+FE++     P      K  P   +R TP   +   ++  +       L
Sbjct: 92  SFVEM---NPSLFEIYYDRIKP------KSDPVQFLRPTPRLRAFLDEEQRIYSENEPLL 151

Query: 174 AEKLQKLLMLSSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPDKFK-TVDTSYGRA-LE 233
             KL +LLM++    I   KLVH+  D   P +F  +L   YP+ F+ T     G++ LE
Sbjct: 152 VSKLCQLLMMAKDKVISADKLVHVKRDFGFPNDFLMKLVQKYPNYFRLTGLPEEGKSFLE 211

Query: 234 LVSWDPELARPLPGLQFPSRELIVDRPLKFNL-LRLRKGLNLKRAHQEFLIKFRDLPDIC 293
           LVSW+P+ A+    L+     L     ++ N  ++L  G  L++  +E+   + +   I 
Sbjct: 212 LVSWNPDFAKSKIELRAEDETLKTGVRIRPNYNVKLPSGFFLRKEMREWTRDWLEQDYIS 271

Query: 294 PYKTPASELAKESLESEKRACAVVREVLAMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVR 353
           PY+   S L + S E EKR   VV E+L++ + KR  +  L  F  +F   N    +  R
Sbjct: 272 PYE-DVSHLDQASKEMEKRTVGVVHELLSLSLLKRVPVPTLGKFCDEFRFSNAFSSVFTR 331

Query: 354 HPELFYVSLKGQRDSVFLVEGFDDKGVLMEKDETLAIKNQWVKLLVEGKRVRREKRKAQ 407
           H  +FY+SLKG   +  L E + D   L+++D  LAIK+++++LL EG + R+++ K Q
Sbjct: 332 HSGIFYLSLKGGIKTAVLREAYKD-DELVDRDPLLAIKDKFLRLLEEGWQERKDRLKLQ 379

The following BLAST results are available for this feature:

BLAST of Sed0018901 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904265.1	3.1e-246	89.07	protein WHAT'S THIS FACTOR 1, chloroplastic [Benincasa hispida] >XP_038904305.1 ...	[more]
XP_004152293.1	1.6e-242	87.63	protein WHAT'S THIS FACTOR 1, chloroplastic [Cucumis sativus] >XP_031739932.1 pr...	[more]
XP_022955645.1	1.0e-241	87.63	protein WHAT'S THIS FACTOR 1 [Cucurbita moschata] >XP_022955646.1 protein WHAT'S...	[more]
KAG6582056.1	8.6e-241	87.81	Protein WHAT'S THIS FACTOR 1-like, chloroplastic, partial [Cucurbita argyrosperm...	[more]
XP_023527715.1	1.9e-240	88.07	protein WHAT'S THIS FACTOR 1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0018901 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B6TTV8	1.4e-60	37.50	Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=...	[more]
Q65XL5	2.7e-59	36.79	Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japon...	[more]
A0MFS5	1.6e-56	34.32	Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3...	[more]
Q689D6	3.0e-18	23.47	Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1...	[more]
Q9ZUZ6	1.1e-17	23.63	Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=W...	[more]

BLAST of Sed0018901 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KU86	7.6e-243	87.63	PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G015830 PE=4 S...	[more]
A0A6J1GVP1	4.9e-242	87.63	protein WHAT'S THIS FACTOR 1 OS=Cucurbita moschata OX=3662 GN=LOC111457587 PE=4 ...	[more]
A0A6J1IUA5	2.1e-240	87.22	protein WHAT'S THIS FACTOR 1 OS=Cucurbita maxima OX=3661 GN=LOC111479376 PE=4 SV...	[more]
A0A1S3BYB2	3.5e-240	87.63	protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103494529 PE=4...	[more]
A0A5D3D0F7	3.5e-240	87.63	Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]

BLAST of Sed0018901 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G62990.1	1.2e-142	57.03	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT4G01037.1	1.1e-57	34.32	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT5G48040.1	1.7e-29	29.64	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT5G21970.1	1.5e-28	28.37	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT3G63090.1	2.5e-28	29.81	Ubiquitin carboxyl-terminal hydrolase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021099	Plant organelle RNA recognition domain	PFAM	PF11955	PORR	coord: 59..396 e-value: 5.9E-93 score: 311.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 409..429
None	No IPR available	PANTHER	PTHR31476:SF2	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEIN	coord: 47..448
IPR045040	PORR family	PANTHER	PTHR31476	PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC	coord: 47..448

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0018901.1	Sed0018901.1	mRNA
Sed0018901.2	Sed0018901.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding