Sed0018489 (gene) Chayote v1

Overview


Name	Sed0018489
Type	gene
Organism	Sechium edule (Chayote v1)
Description	gibberellin-regulated protein 9
Location	LG03: 4097163 .. 4099736 (+)
RNA-Seq Expression	Sed0018489
Synteny	Sed0018489

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTTGTGTTCATCTATCAAAATTATTTGGGCATATCTTCTTAAGAAATGAAGCCTCTAAGTCTTCTTTGCATTTCTATTCTCCTTCTCTTTCTCATGCAGGTATTATATACTTAATTATATATATCATTTGATTCAATATTATTTGGGTCATCATACTTTGACTTTTATTCTATTTTGATTTTTGAACTAGTTTTTATACTTTCAAAAAAGCTTAAACTTATTTTTATGGTAAGCTTTTAATTTTTCTTCTTCTCAAAAAAATTACTCTCTTCCTCCATAACTTGTAAAAATATGTTCATGTTTTTTTCTTTTTTGGTTTTAAAATTACTAATATTATTATACCAATTTCAAAGTAACCATATGAAGTACTTTGAAAGTACAAAAAAAAGGACAAAATGAAACAAAAGTCAAACTAAAATAATATTTATAATTTATAATTTTAAATGTTAATCACTAATTAGCTATTAAAAAGTATAAATGTTTTGTTTTTCTTTGTTTATTTTCTTGTAGGGGTTTTCAGAGGCTTCCTCATCTTTCACTTCTGTGAGAGTTCTCCATCTCTTCTATTTATCACCACTAAGTTGTGAAATTCGTTGAATTTATATTTAGTAATTAAACTTGGATGGAAAATTTGAGACATGAAGGATTAGATAAACATATGTTGAAGATAATCCTTATACTAGACTCAAATAAATTGGAGTGATGTTTTTTTTTTTTTGAGATTACACTAATAAGGGGTAGGAGAACTCAAACCAAAGATCTTTTGGTCATTGGATTTATACTGATGTCGTTGAGTTACTACTCTTGTTGAAGTAATTTTGGTTTAGTAGCAACTTAACACGGTTGAGTCCATCGAAATACAATACCGATTTCGATCTCGTGAACACGTGAGGAATAGACTTTCTATATGAGTCTCTCTTTTATATAAATATAAAGTGAAGTGCTAAGTATCGAATATATGTGTATTAAAATGTTAGAAGTTGGAACGAGTTTTGACAAAGCAAGAGTTTTTTTTTTCTTCCAATTTAACAACAATATTTAAGATTGAGATCTTTGAATCGACAACTTTGGGATGTCTACTTTAACAACAAACCAAGAGTTAATAGATAAGAAGTTTGAATTTATGCTCCATTTAGAGAATTCATATAATTTTGTTTATTGAATAAATTTGTGATCTGTAAAAGTTAATGCATGCATAAATTAGAATTTTGGATATATATATATGTTTGGTGTACGTAATCAACAAATAATTTCACAATAGAATGTAAACTCACAAATCAAATATCCTAAACTATTAGAAAAAACTTGGTATACTGTTTCAAAAAAAAAAAAACTAGAAAGACGAAAAAAATCGGTGTAAATAAATAAATAAGTATATATATTGAAATAATTGGTGAAAATATTTAGAACAAGTCTACTAACAAAGATTGGTGTTGGATTCAGGTGGATGAAGGGACTACAACGGTAGCTCTCACCAAAAAACATCATTATCTTCCGAAAATCAGTAAGTTGTCATGTGAATAACATTTTTTCTGTTAAATTATAAGTCAATTTTCGAATTCGTATCTAATTAATTTGTAAGTTAGACAAAAAAAAGATTAAAATCATTTTTATCTCCATACTTTTCGATTTGTTTTATTAAGATGCATGAACTTTTGAATATTCAATTTTAGTCTAAAGTTTAAAATCAATCCAAATGATAAGCTTGAAATTAATTTTAATTGAAATAGATTTAGTAATAATTTTAATACAAGAAATATCAAAATGTGAACCCATTTAAAAAAATGTATAAAGGAAAAGTTAATATGAAGTTTTTTTTTTTAAATAAAAGAACTTACGAGACTAGTAAAATCTAGAAAAAAATTACAAATATAATCGATTTTTTATAAAAAAAACATAAATATAGGCATCGATATTAATGAACATTGTCACATACTTTCTTATAATAAGGTATTAATATATATTTATAATACAATATCAAAACGTATTAATGACCATGGATATAAATAATTTAAAATTACTTTAATAATTATTTTGTGAGAAAAATCCCTCTATTTAATTTTTCAAGTTTTTTTTAAAGAAAAATTGACAAAAAAAAGAAGAAACTATCATAAAAACTAGTTCAACACTTTTTTTTAAAATAGTTTAATGACAAAAATAGAACAAACTAAAAATATAGAGACCAAAATGATATTTTTAACACGAAATCGGGGATCGATGGTTGGTTTTGGGAATGTGGATTAGATTGCAAAGAAGCATGCTCAAGGCGATGCAGCAAAGCGTCAAGGAAGAAGATATGCATGCGCGCCTGTGGAACATGCTGCAGCCGCTGCCACTGTGTCCCGCCCGGCACCAACGGCAACCACCAAGCCTGCCCTTGCTACGCTCGCCTCAAGACCCACCACAATCAGCCCAAGTGCCCCTAAATTTTACATTTATATTTGGTGCTGGTTTTATGGTACTTTTATTGACATTTACTCATTTTAAATGCTAATAATGTGCTTAAATATCTAAATTCGGTGGTTTCAGTTGCTTATTATTTGAATAAACATAACGAGCCTTTTAATTTTCA

mRNA sequence

CATTTGTGTTCATCTATCAAAATTATTTGGGCATATCTTCTTAAGAAATGAAGCCTCTAAGTCTTCTTTGCATTTCTATTCTCCTTCTCTTTCTCATGCAGGGGTTTTCAGAGGCTTCCTCATCTTTCACTTCTGTGGATGAAGGGACTACAACGGTAGCTCTCACCAAAAAACATCATTATCTTCCGAAAATCAATTGCAAAGAAGCATGCTCAAGGCGATGCAGCAAAGCGTCAAGGAAGAAGATATGCATGCGCGCCTGTGGAACATGCTGCAGCCGCTGCCACTGTGTCCCGCCCGGCACCAACGGCAACCACCAAGCCTGCCCTTGCTACGCTCGCCTCAAGACCCACCACAATCAGCCCAAGTGCCCCTAAATTTTACATTTATATTTGGTGCTGGTTTTATGGTACTTTTATTGACATTTACTCATTTTAAATGCTAATAATGTGCTTAAATATCTAAATTCGGTGGTTTCAGTTGCTTATTATTTGAATAAACATAACGAGCCTTTTAATTTTCA

Coding sequence (CDS)

ATGAAGCCTCTAAGTCTTCTTTGCATTTCTATTCTCCTTCTCTTTCTCATGCAGGGGTTTTCAGAGGCTTCCTCATCTTTCACTTCTGTGGATGAAGGGACTACAACGGTAGCTCTCACCAAAAAACATCATTATCTTCCGAAAATCAATTGCAAAGAAGCATGCTCAAGGCGATGCAGCAAAGCGTCAAGGAAGAAGATATGCATGCGCGCCTGTGGAACATGCTGCAGCCGCTGCCACTGTGTCCCGCCCGGCACCAACGGCAACCACCAAGCCTGCCCTTGCTACGCTCGCCTCAAGACCCACCACAATCAGCCCAAGTGCCCCTAA

Protein sequence

MKPLSLLCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCSKASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLKTHHNQPKCP

Homology

[Close]

BLAST of Sed0018489 vs. NCBI nr
Match: XP_038885058.1 (gibberellin-regulated protein 9-like [Benincasa hispida])

HSP 1 Score: 186.0 bits (471), Expect = 1.7e-43
Identity = 90/109 (82.57%), Postives = 95/109 (87.16%), Query Frame = 0


Query: 1   MKPLSLLCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCS 60
           MKPLSLLCI I+L  L+QGFSEA   FT+VDEGT TVALTKK+HY PKINCK  CSRRCS
Sbjct: 1   MKPLSLLCIFIILSILLQGFSEA---FTTVDEGTNTVALTKKYHYHPKINCKRECSRRCS 60

Query: 61  KASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLKTHHNQPKCP 110
           K  RKKICMRACGTCCSRCHCVPPGT GNHQACPCYARLKTH N+PKCP
Sbjct: 61  KVFRKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLKTHGNKPKCP 106

[Close]

BLAST of Sed0018489 vs. NCBI nr
Match: XP_004138815.1 (gibberellin-regulated protein 9 [Cucumis sativus])

HSP 1 Score: 183.3 bits (464), Expect = 1.1e-42
Identity = 88/109 (80.73%), Postives = 94/109 (86.24%), Query Frame = 0


Query: 1   MKPLSLLCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCS 60
           MKPLSLLCI I+L FL+QGFSEA     +VDEGT TVALTKK+HY PKINCK  CSRRCS
Sbjct: 1   MKPLSLLCIFIILSFLLQGFSEA---IATVDEGTNTVALTKKYHYQPKINCKSECSRRCS 60

Query: 61  KASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLKTHHNQPKCP 110
           K  RKKICMRACGTCCSRCHCVPPGT GNHQACPCYARL+TH N+PKCP
Sbjct: 61  KVFRKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 106

[Close]

BLAST of Sed0018489 vs. NCBI nr
Match: XP_008441216.1 (PREDICTED: gibberellin-regulated protein 9 [Cucumis melo])

HSP 1 Score: 181.4 bits (459), Expect = 4.1e-42
Identity = 87/109 (79.82%), Postives = 94/109 (86.24%), Query Frame = 0


Query: 1   MKPLSLLCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCS 60
           MKPLSLLCI I+L FL+QGFSEA    T+VD GT TVAL+KK+HY PKINCK  CSRRCS
Sbjct: 1   MKPLSLLCIFIILSFLLQGFSEA---ITTVDAGTNTVALSKKYHYQPKINCKSECSRRCS 60

Query: 61  KASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLKTHHNQPKCP 110
           K  RKKICMRACGTCCSRCHCVPPGT GNHQACPCYARL+TH N+PKCP
Sbjct: 61  KVFRKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 106

[Close]

BLAST of Sed0018489 vs. NCBI nr
Match: XP_022152524.1 (gibberellin-regulated protein 9 [Momordica charantia])

HSP 1 Score: 170.2 bits (430), Expect = 9.6e-39
Identity = 80/109 (73.39%), Postives = 92/109 (84.40%), Query Frame = 0


Query: 1   MKPLSLLCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCS 60
           MKP+S L I +LLLFL+Q  SEAS S+++V++G+  VA+ KKH   PKINCK ACSRRC 
Sbjct: 1   MKPISFLFILLLLLFLLQALSEASPSYSTVNKGSNRVAVDKKHQQSPKINCKYACSRRCM 60

Query: 61  KASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLKTHHNQPKCP 110
           KASRKKICMRACG+CCSRCHCVPPGT GNHQ CPCYARLKTH N+PKCP
Sbjct: 61  KASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP 109

[Close]

BLAST of Sed0018489 vs. NCBI nr
Match: XP_023550961.1 (gibberellin-regulated protein 9-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 167.9 bits (424), Expect = 4.7e-38
Identity = 81/109 (74.31%), Postives = 89/109 (81.65%), Query Frame = 0


Query: 1   MKPLSLLCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCS 60
           MKPLS+LC  +LLL  +QG SEA   FT+V+EGT T AL KKH Y PKINCK ACSRRC 
Sbjct: 21  MKPLSVLCTFVLLLLFLQGLSEA---FTNVNEGTNTTALNKKHIYSPKINCKYACSRRCM 80

Query: 61  KASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLKTHHNQPKCP 110
           K  RKKICMRACG+CCSRCHCVPPGT GNHQACPCYARL+TH N+ KCP
Sbjct: 81  KVRRKKICMRACGSCCSRCHCVPPGTYGNHQACPCYARLRTHGNRLKCP 126

[Close]

BLAST of Sed0018489 vs. ExPASy Swiss-Prot
Match: Q8GWK5 (Gibberellin-regulated protein 9 OS=Arabidopsis thaliana OX=3702 GN=GASA9 PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 2.8e-25
Identity = 52/106 (49.06%), Postives = 74/106 (69.81%), Query Frame = 0


Query: 4   LSLLCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCSKAS 63
           +S L +S +L  L    +  +SS +  ++   T A  + +H+ P+INC  AC+RRCSK S
Sbjct: 14  ISFLLLSQVLAELSSSSNNETSSVSQTNDENQTAAFKRTYHHRPRINCGHACARRCSKTS 73

Query: 64  RKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLKTHHNQPKCP 110
           RKK+C RACG+CC++C CVPPGT+GN  +CPCYA ++TH N+ KCP
Sbjct: 74  RKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKCP 119

[Close]

BLAST of Sed0018489 vs. ExPASy Swiss-Prot
Match: Q93X17 (Snakin-2 OS=Solanum tuberosum OX=4113 GN=SN2 PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.1e-18
Identity = 47/103 (45.63%), Postives = 66/103 (64.08%), Query Frame = 0


Query: 7   LCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCSKASRKK 66
           L +S+LLL  +Q             +  T+ A+++  +   KI+C  AC+ RC  +SR +
Sbjct: 11  LLLSLLLLEQVQSIQ---------TDQVTSNAISEAAYSYKKIDCGGACAARCRLSSRPR 70

Query: 67  ICMRACGTCCSRCHCVPPGTNGNHQACPCYARLKTHHNQPKCP 110
           +C RACGTCC+RC+CVPPGT+GN + CPCYA L TH N+ KCP
Sbjct: 71  LCNRACGTCCARCNCVPPGTSGNTETCPCYASLTTHGNKRKCP 104

[Close]

BLAST of Sed0018489 vs. ExPASy Swiss-Prot
Match: P46688 (Gibberellin-regulated protein 2 OS=Arabidopsis thaliana OX=3702 GN=GASA2 PE=2 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.6e-17
Identity = 38/62 (61.29%), Postives = 47/62 (75.81%), Query Frame = 0


Query: 48  KINCKEACSRRCSKASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLKTHHNQPK 107
           KI+C   C  RCSK+SR K+C+RAC +CCSRC+CVPPGT+GN   CPCYA + TH  + K
Sbjct: 38  KIDCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLCPCYASITTHGGRLK 97

Query: 108 CP 110
           CP
Sbjct: 98  CP 99

[Close]

BLAST of Sed0018489 vs. ExPASy Swiss-Prot
Match: F4IQJ4 (Gibberellin-regulated protein 11 OS=Arabidopsis thaliana OX=3702 GN=GASA11 PE=3 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.2e-17
Identity = 37/63 (58.73%), Postives = 45/63 (71.43%), Query Frame = 0


Query: 47  PKINCKEACSRRCSKASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLKTHHNQP 106
           PKI+C   C  RCS +SR  +C RACGTCC+RC+CV PGT+GN+  CPCY  L TH  + 
Sbjct: 32  PKIDCNSRCQERCSLSSRPNLCHRACGTCCARCNCVAPGTSGNYDKCPCYGSLTTHGGRR 91

Query: 107 KCP 110
           KCP
Sbjct: 92  KCP 94

[Close]

BLAST of Sed0018489 vs. ExPASy Swiss-Prot
Match: P46689 (Gibberellin-regulated protein 1 OS=Arabidopsis thaliana OX=3702 GN=GASA1 PE=2 SV=2)

HSP 1 Score: 87.4 bits (215), Expect = 1.1e-16
Identity = 48/106 (45.28%), Postives = 61/106 (57.55%), Query Frame = 0


Query: 4   LSLLCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCSKAS 63
           ++ L IS+L+L L+Q   E S                KK+ Y  KI+C  AC  RC  + 
Sbjct: 8   IASLLISLLVLQLVQADVENSQ---------------KKNGYAKKIDCGSACVARCRLSR 67

Query: 64  RKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLKTHHNQPKCP 110
           R ++C RACGTCC RC+CVPPGT GN+  C CYA L TH  + KCP
Sbjct: 68  RPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKCP 98

[Close]

BLAST of Sed0018489 vs. ExPASy TrEMBL
Match: A0A0A0LMS4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G402110 PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 5.3e-43
Identity = 88/109 (80.73%), Postives = 94/109 (86.24%), Query Frame = 0


Query: 1   MKPLSLLCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCS 60
           MKPLSLLCI I+L FL+QGFSEA     +VDEGT TVALTKK+HY PKINCK  CSRRCS
Sbjct: 1   MKPLSLLCIFIILSFLLQGFSEA---IATVDEGTNTVALTKKYHYQPKINCKSECSRRCS 60

Query: 61  KASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLKTHHNQPKCP 110
           K  RKKICMRACGTCCSRCHCVPPGT GNHQACPCYARL+TH N+PKCP
Sbjct: 61  KVFRKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 106

[Close]

BLAST of Sed0018489 vs. ExPASy TrEMBL
Match: A0A1S3B2G6 (gibberellin-regulated protein 9 OS=Cucumis melo OX=3656 GN=LOC103485417 PE=3 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 2.0e-42
Identity = 87/109 (79.82%), Postives = 94/109 (86.24%), Query Frame = 0


Query: 1   MKPLSLLCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCS 60
           MKPLSLLCI I+L FL+QGFSEA    T+VD GT TVAL+KK+HY PKINCK  CSRRCS
Sbjct: 1   MKPLSLLCIFIILSFLLQGFSEA---ITTVDAGTNTVALSKKYHYQPKINCKSECSRRCS 60

Query: 61  KASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLKTHHNQPKCP 110
           K  RKKICMRACGTCCSRCHCVPPGT GNHQACPCYARL+TH N+PKCP
Sbjct: 61  KVFRKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 106

[Close]

BLAST of Sed0018489 vs. ExPASy TrEMBL
Match: A0A6J1DG94 (gibberellin-regulated protein 9 OS=Momordica charantia OX=3673 GN=LOC111020228 PE=3 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 4.6e-39
Identity = 80/109 (73.39%), Postives = 92/109 (84.40%), Query Frame = 0


Query: 1   MKPLSLLCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCS 60
           MKP+S L I +LLLFL+Q  SEAS S+++V++G+  VA+ KKH   PKINCK ACSRRC 
Sbjct: 1   MKPISFLFILLLLLFLLQALSEASPSYSTVNKGSNRVAVDKKHQQSPKINCKYACSRRCM 60

Query: 61  KASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLKTHHNQPKCP 110
           KASRKKICMRACG+CCSRCHCVPPGT GNHQ CPCYARLKTH N+PKCP
Sbjct: 61  KASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP 109

[Close]

BLAST of Sed0018489 vs. ExPASy TrEMBL
Match: A0A6J1FFC2 (gibberellin-regulated protein 9 OS=Cucurbita moschata OX=3662 GN=LOC111444936 PE=3 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 3.0e-38
Identity = 81/109 (74.31%), Postives = 89/109 (81.65%), Query Frame = 0


Query: 1   MKPLSLLCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCS 60
           MKPLS+LC  +LLL  +QG SEA   FT+V+EGT T AL KKH Y PKINCK ACSRRC 
Sbjct: 1   MKPLSVLCTFVLLLLFLQGLSEA---FTNVNEGTNTAALDKKHIYSPKINCKYACSRRCM 60

Query: 61  KASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLKTHHNQPKCP 110
           K  RKKICMRACG+CCSRCHCVPPGT GNHQACPCYARL+TH N+ KCP
Sbjct: 61  KVRRKKICMRACGSCCSRCHCVPPGTYGNHQACPCYARLRTHGNRLKCP 106

[Close]

BLAST of Sed0018489 vs. ExPASy TrEMBL
Match: A0A6J1JZB3 (gibberellin-regulated protein 9-like OS=Cucurbita maxima OX=3661 GN=LOC111489231 PE=3 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 3.9e-38
Identity = 81/109 (74.31%), Postives = 89/109 (81.65%), Query Frame = 0


Query: 1   MKPLSLLCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCS 60
           MKPLS+LC  +LLL  +QG SEAS   T+V+EGT T AL KKH Y PKINCK ACSRRC 
Sbjct: 21  MKPLSVLCTFVLLLLFLQGLSEAS---TNVNEGTNTAALDKKHIYSPKINCKYACSRRCM 80

Query: 61  KASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLKTHHNQPKCP 110
           K  RKKICMRACG+CCSRCHCVPPGT GNHQACPCYARL+TH N+ KCP
Sbjct: 81  KVRRKKICMRACGSCCSRCHCVPPGTYGNHQACPCYARLRTHGNKLKCP 126

[Close]

BLAST of Sed0018489 vs. TAIR 10
Match: AT1G22690.1 (Gibberellin-regulated family protein )

HSP 1 Score: 115.9 bits (289), Expect = 2.0e-26
Identity = 52/106 (49.06%), Postives = 74/106 (69.81%), Query Frame = 0


Query: 4   LSLLCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCSKAS 63
           +S L +S +L  L    +  +SS +  ++   T A  + +H+ P+INC  AC+RRCSK S
Sbjct: 14  ISFLLLSQVLAELSSSSNNETSSVSQTNDENQTAAFKRTYHHRPRINCGHACARRCSKTS 73

Query: 64  RKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLKTHHNQPKCP 110
           RKK+C RACG+CC++C CVPPGT+GN  +CPCYA ++TH N+ KCP
Sbjct: 74  RKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKCP 119

[Close]

BLAST of Sed0018489 vs. TAIR 10
Match: AT1G22690.2 (Gibberellin-regulated family protein )

HSP 1 Score: 115.9 bits (289), Expect = 2.0e-26
Identity = 52/106 (49.06%), Postives = 74/106 (69.81%), Query Frame = 0


Query: 4   LSLLCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCSKAS 63
           +S L +S +L  L    +  +SS +  ++   T A  + +H+ P+INC  AC+RRCSK S
Sbjct: 14  ISFLLLSQVLAELSSSSNNETSSVSQTNDENQTAAFKRTYHHRPRINCGHACARRCSKTS 73

Query: 64  RKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLKTHHNQPKCP 110
           RKK+C RACG+CC++C CVPPGT+GN  +CPCYA ++TH N+ KCP
Sbjct: 74  RKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKCP 119

[Close]

BLAST of Sed0018489 vs. TAIR 10
Match: AT1G22690.3 (Gibberellin-regulated family protein )

HSP 1 Score: 115.9 bits (289), Expect = 2.0e-26
Identity = 52/106 (49.06%), Postives = 74/106 (69.81%), Query Frame = 0


Query: 4   LSLLCISILLLFLMQGFSEASSSFTSVDEGTTTVALTKKHHYLPKINCKEACSRRCSKAS 63
           +S L +S +L  L    +  +SS +  ++   T A  + +H+ P+INC  AC+RRCSK S
Sbjct: 14  ISFLLLSQVLAELSSSSNNETSSVSQTNDENQTAAFKRTYHHRPRINCGHACARRCSKTS 73

Query: 64  RKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLKTHHNQPKCP 110
           RKK+C RACG+CC++C CVPPGT+GN  +CPCYA ++TH N+ KCP
Sbjct: 74  RKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKCP 119

[Close]

BLAST of Sed0018489 vs. TAIR 10
Match: AT4G09610.1 (GAST1 protein homolog 2 )

HSP 1 Score: 90.1 bits (222), Expect = 1.2e-18
Identity = 38/62 (61.29%), Postives = 47/62 (75.81%), Query Frame = 0


Query: 48  KINCKEACSRRCSKASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLKTHHNQPK 107
           KI+C   C  RCSK+SR K+C+RAC +CCSRC+CVPPGT+GN   CPCYA + TH  + K
Sbjct: 38  KIDCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLCPCYASITTHGGRLK 97

Query: 108 CP 110
           CP
Sbjct: 98  CP 99

[Close]

BLAST of Sed0018489 vs. TAIR 10
Match: AT2G18420.1 (Gibberellin-regulated family protein )

HSP 1 Score: 89.7 bits (221), Expect = 1.5e-18
Identity = 37/63 (58.73%), Postives = 45/63 (71.43%), Query Frame = 0


Query: 47  PKINCKEACSRRCSKASRKKICMRACGTCCSRCHCVPPGTNGNHQACPCYARLKTHHNQP 106
           PKI+C   C  RCS +SR  +C RACGTCC+RC+CV PGT+GN+  CPCY  L TH  + 
Sbjct: 32  PKIDCNSRCQERCSLSSRPNLCHRACGTCCARCNCVAPGTSGNYDKCPCYGSLTTHGGRR 91

Query: 107 KCP 110
           KCP
Sbjct: 92  KCP 94

The following BLAST results are available for this feature:

BLAST of Sed0018489 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885058.1	1.7e-43	82.57	gibberellin-regulated protein 9-like [Benincasa hispida]	[more]
XP_004138815.1	1.1e-42	80.73	gibberellin-regulated protein 9 [Cucumis sativus]	[more]
XP_008441216.1	4.1e-42	79.82	PREDICTED: gibberellin-regulated protein 9 [Cucumis melo]	[more]
XP_022152524.1	9.6e-39	73.39	gibberellin-regulated protein 9 [Momordica charantia]	[more]
XP_023550961.1	4.7e-38	74.31	gibberellin-regulated protein 9-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0018489 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GWK5	2.8e-25	49.06	Gibberellin-regulated protein 9 OS=Arabidopsis thaliana OX=3702 GN=GASA9 PE=3 SV...	[more]
Q93X17	1.1e-18	45.63	Snakin-2 OS=Solanum tuberosum OX=4113 GN=SN2 PE=1 SV=1	[more]
P46688	1.6e-17	61.29	Gibberellin-regulated protein 2 OS=Arabidopsis thaliana OX=3702 GN=GASA2 PE=2 SV...	[more]
F4IQJ4	2.2e-17	58.73	Gibberellin-regulated protein 11 OS=Arabidopsis thaliana OX=3702 GN=GASA11 PE=3 ...	[more]
P46689	1.1e-16	45.28	Gibberellin-regulated protein 1 OS=Arabidopsis thaliana OX=3702 GN=GASA1 PE=2 SV...	[more]

BLAST of Sed0018489 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LMS4	5.3e-43	80.73	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G402110 PE=3 SV=1	[more]
A0A1S3B2G6	2.0e-42	79.82	gibberellin-regulated protein 9 OS=Cucumis melo OX=3656 GN=LOC103485417 PE=3 SV=...	[more]
A0A6J1DG94	4.6e-39	73.39	gibberellin-regulated protein 9 OS=Momordica charantia OX=3673 GN=LOC111020228 P...	[more]
A0A6J1FFC2	3.0e-38	74.31	gibberellin-regulated protein 9 OS=Cucurbita moschata OX=3662 GN=LOC111444936 PE...	[more]
A0A6J1JZB3	3.9e-38	74.31	gibberellin-regulated protein 9-like OS=Cucurbita maxima OX=3661 GN=LOC111489231...	[more]

BLAST of Sed0018489 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G22690.1	2.0e-26	49.06	Gibberellin-regulated family protein	[more]
AT1G22690.2	2.0e-26	49.06	Gibberellin-regulated family protein	[more]
AT1G22690.3	2.0e-26	49.06	Gibberellin-regulated family protein	[more]
AT4G09610.1	1.2e-18	61.29	GAST1 protein homolog 2	[more]
AT2G18420.1	1.5e-18	58.73	Gibberellin-regulated family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003854	Gibberellin regulated protein	PFAM	PF02704	GASA	coord: 39..98 e-value: 3.5E-22 score: 78.3
None	No IPR available	PANTHER	PTHR23201:SF104	GIBBERELLIN-REGULATED PROTEIN 1	coord: 6..98
None	No IPR available	PANTHER	PTHR23201	EXTENSIN, PROLINE-RICH PROTEIN	coord: 6..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0018489.1	Sed0018489.1	mRNA
Sed0018489.2	Sed0018489.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009740	gibberellic acid mediated signaling pathway
cellular_component	GO:0005576	extracellular region