Sed0017788 (gene) Chayote v1

Overview


Name	Sed0017788
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Location	LG04: 403381 .. 404240 (-)
RNA-Seq Expression	Sed0017788
Synteny	Sed0017788

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTAAAAAGGAAGAGAAGAGCAGCATAATCGCTGGAGGGGAGGAGGAGAATATTTATATAGTTGAGGCCAACGTTGGGCATGAGAACGAGTATGGGTTTGATGTAGCTGAAAAACAGATAGAACGAAATACAATAAGGGTACAGAAAGCTCAGAAAAAGAAGGAAGAGATGTGGAGGCCAAAGTTAGTGTGGCCGAATTGGAAGATTCGAAAAAAAAGGGTGGTGGCCAGAAACGACGGAGCACGGGTGTGGGTGTGTCTTGCGGCTGAGGAAGACGAAGATCCAAGGCCACGTGCATGATTTAAGTGGAAGGGTAACAATTAACCCTAAACACGCGTGTTGGGCTGATTTTAAAACTTACATAAGTATTGGGCTTCGTGGGATTGAGAAGGGAGACTTAATGGGCATAGCTGAATTTAAAATTTATAAAAGTTTTGCGCTTCATGGAAAAGGGAGACTTCATGGGCTATAATGGATTGGTGTTATTATGGGTTCCATGGAACACTCAACAAAAGCCCAGGAGGGTGATGATGGGCCCATATGAAACAAATGATCAGAAGATGAGCAATTCTACCAAACAGGAGAATCTATATCTAGAAATTGGCATTTCCGGCAACATTTTCACACAAGGGAACAAGTCGACAAAGCAGGCTGAATCATTCAAACTTCATAAGAGAAAGAGTGAATGTTATTTTGTGGGCGTTTACAAAGAACTAACTGTTTCAATTGCAACCATGGATGAAAATTATGAAACAAACCATGTAGTAGACCATGCCATGGCCAAGAAGGAATGGAGTGATTTTATGAAGTACTGGGAAAATGGATTGCCACGGTTTCATGTTATTGAAAAGAGCTGA

mRNA sequence

ATGAGTAAAAAGGAAGAGAAGAGCAGCATAATCGCTGGAGGGGAGGAGGAGAATATTTATATAGTTGAGGCCAACGTTGGGCATGAGAACGAGTATGGGTTTGATGTAGCTGAAAAACAGATAGAACGAAATACAATAAGGGTACAGAAAGCTCAGAAAAAGAAGGAAGAGATGTGGAGGCCAAAGTTAGTGTGGCCGAATTGGAAGATTCGAAAAAAAAGGGTGGTGGCCAGAAACGACGGAGCACGGGTGTGGGTGTGTCTTGCGGCTGAGGAAGACGAAGATCCAAGGCCACTTTTGCGCTTCATGGAAAAGGGAGACTTCATGGGCTATAATGGATTGGTGTTATTATGGGTTCCATGGAACACTCAACAAAAGCCCAGGAGGGTGATGATGGGCCCATATGAAACAAATGATCAGAAGATGAGCAATTCTACCAAACAGGAGAATCTATATCTAGAAATTGGCATTTCCGGCAACATTTTCACACAAGGGAACAAGTCGACAAAGCAGGCTGAATCATTCAAACTTCATAAGAGAAAGAGTGAATGTTATTTTGTGGGCGTTTACAAAGAACTAACTGTTTCAATTGCAACCATGGATGAAAATTATGAAACAAACCATGTAGTAGACCATGCCATGGCCAAGAAGGAATGGAGTGATTTTATGAAGTACTGGGAAAATGGATTGCCACGGTTTCATGTTATTGAAAAGAGCTGA

Coding sequence (CDS)

ATGAGTAAAAAGGAAGAGAAGAGCAGCATAATCGCTGGAGGGGAGGAGGAGAATATTTATATAGTTGAGGCCAACGTTGGGCATGAGAACGAGTATGGGTTTGATGTAGCTGAAAAACAGATAGAACGAAATACAATAAGGGTACAGAAAGCTCAGAAAAAGAAGGAAGAGATGTGGAGGCCAAAGTTAGTGTGGCCGAATTGGAAGATTCGAAAAAAAAGGGTGGTGGCCAGAAACGACGGAGCACGGGTGTGGGTGTGTCTTGCGGCTGAGGAAGACGAAGATCCAAGGCCACTTTTGCGCTTCATGGAAAAGGGAGACTTCATGGGCTATAATGGATTGGTGTTATTATGGGTTCCATGGAACACTCAACAAAAGCCCAGGAGGGTGATGATGGGCCCATATGAAACAAATGATCAGAAGATGAGCAATTCTACCAAACAGGAGAATCTATATCTAGAAATTGGCATTTCCGGCAACATTTTCACACAAGGGAACAAGTCGACAAAGCAGGCTGAATCATTCAAACTTCATAAGAGAAAGAGTGAATGTTATTTTGTGGGCGTTTACAAAGAACTAACTGTTTCAATTGCAACCATGGATGAAAATTATGAAACAAACCATGTAGTAGACCATGCCATGGCCAAGAAGGAATGGAGTGATTTTATGAAGTACTGGGAAAATGGATTGCCACGGTTTCATGTTATTGAAAAGAGCTGA

Protein sequence

MSKKEEKSSIIAGGEEENIYIVEANVGHENEYGFDVAEKQIERNTIRVQKAQKKKEEMWRPKLVWPNWKIRKKRVVARNDGARVWVCLAAEEDEDPRPLLRFMEKGDFMGYNGLVLLWVPWNTQQKPRRVMMGPYETNDQKMSNSTKQENLYLEIGISGNIFTQGNKSTKQAESFKLHKRKSECYFVGVYKELTVSIATMDENYETNHVVDHAMAKKEWSDFMKYWENGLPRFHVIEKS

Homology

The following BLAST results are available for this feature:

BLAST of Sed0017788 vs.


Match Name	E-value	Identity	Description

BLAST of Sed0017788 vs.


Match Name	E-value	Identity	Description

BLAST of Sed0017788 vs.


Match Name	E-value	Identity	Description

BLAST of Sed0017788 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 34..54

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0017788.1	Sed0017788.1	mRNA