Sed0017437 (gene) Chayote v1

Overview


Name	Sed0017437
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Pentatricopeptide repeat-containing protein
Location	LG01: 14788314 .. 14790984 (-)
RNA-Seq Expression	Sed0017437
Synteny	Sed0017437

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTGAACCAAGTCCAACACAATTGGCATCGCATGGGGGCGGAGCTCCTGCATCAGCCTTTATGCCTTTGATGCAATTCTCAACATCTCTCCGAATTCTAAACCTCCATGGATTTCCCTTCAAATTATCTTCCTTTCGATCTTCAGTTTCTGCCTCCGCCGCATGTTTCTCCGATCTCATCTTTTCGCCGCACCACGATTCATCAACATCTTCGTCGCAATCTCCCGTGCAAAAGATTTGTTCACTGGTTCTAGACTCCTATTTTCGTCAACCCCATTTGAGATTCTCCCCTTCTAAGCTCAATCTCAGCATGGATGCCGACTCTGTGACCCACGAGCAAGCCATTTCAGTCGTCGCTTCGCTTGCTGCCCAAGAGGGTTCAATGGTGGCGTTGAGTTTCTTCTACTGGGCAATTGGGTTCTCCAAATTTCGCCATTTCATGCGGCTGTACATTGTTTGTGCCATGTCGTTGATTGGGAGGTCTAATCAGGACAGAGCCCATGAAGTGGTGGAGTCTATGGTTGGGGTTTTTGCTGAAATTGGGAAGTTGAAGGAGGCTGTGGATATGATTTTTGATATGAGAAATCAGGGGCTTGTGTTGACGACGAGGGTGATGAATCGTGTAATCATGGTGGCTGCTGAAATGGGGATGTTTGATTATGCAGGTTATGTGTTCGACGAAATGTCTGCAAGAGGTGTGTCTCCTGATTCTTGCACTTATAAGTCTATAATTGTTGGTTACTGTAGAAATAGAAATGTTTTAGAAGTAGATAGGTGGATATCTGAGATGATGGAGAGAGGTTTTGTGGTTGATAATGCTACATTGACTTTGATTATTAATGCTTTTTGTGAAAAGGGTTTGGTAAATAGAGCACTTGGGCTTTTTCATAAGGTTAATAAGATGGGTTTATCACCTAATTTGATCAATTATTCATCTATGATTAGTGGGTTGTGCAAGAGGGGTAGTGTTAAGCAAGCATTTGAGTTATTGGAAGAAATGGTTAGAAATGGCTGGAAACCTAATGTGTACACACACACATCATTGATTGATGGGCTTTGCAAGAAGGGGTGGACAGAAAGAGCTTTTAGACTGTTTCTTAAACTTGTTAGAAGTGATAATTACAAGCCAAATGTGCACACTTACACAGCCATGATAAGTGGGTATTGCAAAGAGGAGAAGTTGAATAGAGCTGAAATGTTGTTTGAAAGAATGAAAGAACAGGGAATTATTCCAAACACCAACACTTACACAACTCTCATTGATGGGCATTCTAAGGCTGGAAATTTCAGTAGAGCCTATGAATTGATGGGGTTAATGTGTAAGGAAGGTTCCTTTCCTAATATATGGACATACAATGCAGTTGTTGATGGTCTCTGTAAAAAAGGGAGAGCAGAAGAGGCTTTCAAACTGCTAAATAAAGGCGTTCGGAATAATATCGAAGCCAACAGTGTCACATATACCATTCTGATATCTGAGCAGTGTAAGCGAGTTGATTTGAACCGAGCCCTAATGTTTCTTAATAAGATGTTTAAAGTTGGTTTCCAGCCTGATATCCATTTATACACCACTTTGATTGCTGCTTTCTGCAGGCAAAAACTGATGAAAGACAGCGAAAAGTTGTTTGATGAAGTCGTTAAGCGTGGATTGGTTCCAGCGAAGGAAACTTACACATCCATGATATGTGGCTATTGTAGGGAGAGAAAAATTAACTTAGCAGTCAAGTTTTTTCTGAGGATGAGTGGCCATGGTTGTGTACCGGATAGCATTAGTTATGGCGCTTTAATCAGTGGCCTCTGTAAAGAGTCGAGGTTGGACAAGGCTCGCGAATTGTACGATGCCATGATCGACAAAGGGCTGTCTCCATGTGAAGTTACTCGGGTGACATTGGCTTATGAGTACTGCAAAACAGAAGACTTTGCTTCAGCCATGGTTATCTTGGAACGGCTCGAAAAGAAGCTTTGGATACGCACAGTCCATACACTGATAAGGAAGCTTTGTTGCGAGAAGAAAGTCGGCATGGCAGCTCTCTTCTTTCATAAGTTACTGGATAAGGAGGCCAATGTCGATCGTGTGACTTTGGCTGCATTCATGACTGCTTGTTCTGAAAGCAACAAGTATTCTCTTGTTTCTGACTTATCTGAGAGAATATCGAAAGGTATCGGCTAACCTCAAAATACGAGAATGATCGATCAATTTTCTGTGTTGAAGAGCTGAACAATGGAGGATAAGGGTCAGAGATGGACTTGAATCTCTTGATTTGATTGCAAGTCAGCTGCATTTCAGAGATTTCTTCAAGATGTTGGGCCTCCACTTGCTTAAGTTTGCTGCAGGTAATTCATGTTTTGATTCATAATCTTTTCTTCCTATTTTTGTTATTTATCTTTTTGTTTTCTATATTGAAACTACAAGAAGAATTCTCTGCTGTTACAGTCTTAACCTGAACAGTTTTCAGAACAAAAATGAAGATGTTGTATGGGAAGTAATTACAAAATGGCAGTCTTTCACTATCTCAAGCATTGGATTGATGCAGAAGCCTTTCCCAGTATTTATTGATATCCAAGAAATTTGGATATCATACATTTTCTTTTCAGCAATAATTACTCTTCTTTTTTAGATACTAATTTATTTAGCTTTCGAATACCAGTTTAAAATTTATGAATTAATACGTAAG

mRNA sequence

AGTGAACCAAGTCCAACACAATTGGCATCGCATGGGGGCGGAGCTCCTGCATCAGCCTTTATGCCTTTGATGCAATTCTCAACATCTCTCCGAATTCTAAACCTCCATGGATTTCCCTTCAAATTATCTTCCTTTCGATCTTCAGTTTCTGCCTCCGCCGCATGTTTCTCCGATCTCATCTTTTCGCCGCACCACGATTCATCAACATCTTCGTCGCAATCTCCCGTGCAAAAGATTTGTTCACTGGTTCTAGACTCCTATTTTCGTCAACCCCATTTGAGATTCTCCCCTTCTAAGCTCAATCTCAGCATGGATGCCGACTCTGTGACCCACGAGCAAGCCATTTCAGTCGTCGCTTCGCTTGCTGCCCAAGAGGGTTCAATGGTGGCGTTGAGTTTCTTCTACTGGGCAATTGGGTTCTCCAAATTTCGCCATTTCATGCGGCTGTACATTGTTTGTGCCATGTCGTTGATTGGGAGGTCTAATCAGGACAGAGCCCATGAAGTGGTGGAGTCTATGGTTGGGGTTTTTGCTGAAATTGGGAAGTTGAAGGAGGCTGTGGATATGATTTTTGATATGAGAAATCAGGGGCTTGTGTTGACGACGAGGGTGATGAATCGTGTAATCATGGTGGCTGCTGAAATGGGGATGTTTGATTATGCAGGTTATGTGTTCGACGAAATGTCTGCAAGAGGTGTGTCTCCTGATTCTTGCACTTATAAGTCTATAATTGTTGGTTACTGTAGAAATAGAAATGTTTTAGAAGTAGATAGGTGGATATCTGAGATGATGGAGAGAGGTTTTGTGGTTGATAATGCTACATTGACTTTGATTATTAATGCTTTTTGTGAAAAGGGTTTGGTAAATAGAGCACTTGGGCTTTTTCATAAGGTTAATAAGATGGGTTTATCACCTAATTTGATCAATTATTCATCTATGATTAGTGGGTTGTGCAAGAGGGGTAGTGTTAAGCAAGCATTTGAGTTATTGGAAGAAATGGTTAGAAATGGCTGGAAACCTAATGTGTACACACACACATCATTGATTGATGGGCTTTGCAAGAAGGGGTGGACAGAAAGAGCTTTTAGACTGTTTCTTAAACTTGTTAGAAGTGATAATTACAAGCCAAATGTGCACACTTACACAGCCATGATAAGTGGGTATTGCAAAGAGGAGAAGTTGAATAGAGCTGAAATGTTGTTTGAAAGAATGAAAGAACAGGGAATTATTCCAAACACCAACACTTACACAACTCTCATTGATGGGCATTCTAAGGCTGGAAATTTCAGTAGAGCCTATGAATTGATGGGGTTAATGTGTAAGGAAGGTTCCTTTCCTAATATATGGACATACAATGCAGTTGTTGATGGTCTCTGTAAAAAAGGGAGAGCAGAAGAGGCTTTCAAACTGCTAAATAAAGGCGTTCGGAATAATATCGAAGCCAACAGTGTCACATATACCATTCTGATATCTGAGCAGTGTAAGCGAGTTGATTTGAACCGAGCCCTAATGTTTCTTAATAAGATGTTTAAAGTTGGTTTCCAGCCTGATATCCATTTATACACCACTTTGATTGCTGCTTTCTGCAGGCAAAAACTGATGAAAGACAGCGAAAAGTTGTTTGATGAAGTCGTTAAGCGTGGATTGGTTCCAGCGAAGGAAACTTACACATCCATGATATGTGGCTATTGTAGGGAGAGAAAAATTAACTTAGCAGTCAAGTTTTTTCTGAGGATGAGTGGCCATGGTTGTGTACCGGATAGCATTAGTTATGGCGCTTTAATCAGTGGCCTCTGTAAAGAGTCGAGGTTGGACAAGGCTCGCGAATTGTACGATGCCATGATCGACAAAGGGCTGTCTCCATGTGAAGTTACTCGGGTGACATTGGCTTATGAGTACTGCAAAACAGAAGACTTTGCTTCAGCCATGGTTATCTTGGAACGGCTCGAAAAGAAGCTTTGGATACGCACAGTCCATACACTGATAAGGAAGCTTTGTTGCGAGAAGAAAGTCGGCATGGCAGCTCTCTTCTTTCATAAGTTACTGGATAAGGAGGCCAATGTCGATCGTGTGACTTTGGCTGCATTCATGACTGCTTGTTCTGAAAGCAACAAGTATTCTCTTGTTTCTGACTTATCTGAGAGAATATCGAAAGGTATCGGCTAACCTCAAAATACGAGAATGATCGATCAATTTTCTGTGTTGAAGAGCTGAACAATGGAGGATAAGGGTCAGAGATGGACTTGAATCTCTTGATTTGATTGCAAGTCAGCTGCATTTCAGAGATTTCTTCAAGATGTTGGGCCTCCACTTGCTTAAGTTTGCTGCAGTCTTAACCTGAACAGTTTTCAGAACAAAAATGAAGATGTTGTATGGGAAGTAATTACAAAATGGCAGTCTTTCACTATCTCAAGCATTGGATTGATGCAGAAGCCTTTCCCAGTATTTATTGATATCCAAGAAATTTGGATATCATACATTTTCTTTTCAGCAATAATTACTCTTCTTTTTTAGATACTAATTTATTTAGCTTTCGAATACCAGTTTAAAATTTATGAATTAATACGTAAG

Coding sequence (CDS)

ATGCCTTTGATGCAATTCTCAACATCTCTCCGAATTCTAAACCTCCATGGATTTCCCTTCAAATTATCTTCCTTTCGATCTTCAGTTTCTGCCTCCGCCGCATGTTTCTCCGATCTCATCTTTTCGCCGCACCACGATTCATCAACATCTTCGTCGCAATCTCCCGTGCAAAAGATTTGTTCACTGGTTCTAGACTCCTATTTTCGTCAACCCCATTTGAGATTCTCCCCTTCTAAGCTCAATCTCAGCATGGATGCCGACTCTGTGACCCACGAGCAAGCCATTTCAGTCGTCGCTTCGCTTGCTGCCCAAGAGGGTTCAATGGTGGCGTTGAGTTTCTTCTACTGGGCAATTGGGTTCTCCAAATTTCGCCATTTCATGCGGCTGTACATTGTTTGTGCCATGTCGTTGATTGGGAGGTCTAATCAGGACAGAGCCCATGAAGTGGTGGAGTCTATGGTTGGGGTTTTTGCTGAAATTGGGAAGTTGAAGGAGGCTGTGGATATGATTTTTGATATGAGAAATCAGGGGCTTGTGTTGACGACGAGGGTGATGAATCGTGTAATCATGGTGGCTGCTGAAATGGGGATGTTTGATTATGCAGGTTATGTGTTCGACGAAATGTCTGCAAGAGGTGTGTCTCCTGATTCTTGCACTTATAAGTCTATAATTGTTGGTTACTGTAGAAATAGAAATGTTTTAGAAGTAGATAGGTGGATATCTGAGATGATGGAGAGAGGTTTTGTGGTTGATAATGCTACATTGACTTTGATTATTAATGCTTTTTGTGAAAAGGGTTTGGTAAATAGAGCACTTGGGCTTTTTCATAAGGTTAATAAGATGGGTTTATCACCTAATTTGATCAATTATTCATCTATGATTAGTGGGTTGTGCAAGAGGGGTAGTGTTAAGCAAGCATTTGAGTTATTGGAAGAAATGGTTAGAAATGGCTGGAAACCTAATGTGTACACACACACATCATTGATTGATGGGCTTTGCAAGAAGGGGTGGACAGAAAGAGCTTTTAGACTGTTTCTTAAACTTGTTAGAAGTGATAATTACAAGCCAAATGTGCACACTTACACAGCCATGATAAGTGGGTATTGCAAAGAGGAGAAGTTGAATAGAGCTGAAATGTTGTTTGAAAGAATGAAAGAACAGGGAATTATTCCAAACACCAACACTTACACAACTCTCATTGATGGGCATTCTAAGGCTGGAAATTTCAGTAGAGCCTATGAATTGATGGGGTTAATGTGTAAGGAAGGTTCCTTTCCTAATATATGGACATACAATGCAGTTGTTGATGGTCTCTGTAAAAAAGGGAGAGCAGAAGAGGCTTTCAAACTGCTAAATAAAGGCGTTCGGAATAATATCGAAGCCAACAGTGTCACATATACCATTCTGATATCTGAGCAGTGTAAGCGAGTTGATTTGAACCGAGCCCTAATGTTTCTTAATAAGATGTTTAAAGTTGGTTTCCAGCCTGATATCCATTTATACACCACTTTGATTGCTGCTTTCTGCAGGCAAAAACTGATGAAAGACAGCGAAAAGTTGTTTGATGAAGTCGTTAAGCGTGGATTGGTTCCAGCGAAGGAAACTTACACATCCATGATATGTGGCTATTGTAGGGAGAGAAAAATTAACTTAGCAGTCAAGTTTTTTCTGAGGATGAGTGGCCATGGTTGTGTACCGGATAGCATTAGTTATGGCGCTTTAATCAGTGGCCTCTGTAAAGAGTCGAGGTTGGACAAGGCTCGCGAATTGTACGATGCCATGATCGACAAAGGGCTGTCTCCATGTGAAGTTACTCGGGTGACATTGGCTTATGAGTACTGCAAAACAGAAGACTTTGCTTCAGCCATGGTTATCTTGGAACGGCTCGAAAAGAAGCTTTGGATACGCACAGTCCATACACTGATAAGGAAGCTTTGTTGCGAGAAGAAAGTCGGCATGGCAGCTCTCTTCTTTCATAAGTTACTGGATAAGGAGGCCAATGTCGATCGTGTGACTTTGGCTGCATTCATGACTGCTTGTTCTGAAAGCAACAAGTATTCTCTTGTTTCTGACTTATCTGAGAGAATATCGAAAGGTATCGGCTAA

Protein sequence

MPLMQFSTSLRILNLHGFPFKLSSFRSSVSASAACFSDLIFSPHHDSSTSSSQSPVQKICSLVLDSYFRQPHLRFSPSKLNLSMDADSVTHEQAISVVASLAAQEGSMVALSFFYWAIGFSKFRHFMRLYIVCAMSLIGRSNQDRAHEVVESMVGVFAEIGKLKEAVDMIFDMRNQGLVLTTRVMNRVIMVAAEMGMFDYAGYVFDEMSARGVSPDSCTYKSIIVGYCRNRNVLEVDRWISEMMERGFVVDNATLTLIINAFCEKGLVNRALGLFHKVNKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTERAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKLNRAEMLFERMKEQGIIPNTNTYTTLIDGHSKAGNFSRAYELMGLMCKEGSFPNIWTYNAVVDGLCKKGRAEEAFKLLNKGVRNNIEANSVTYTILISEQCKRVDLNRALMFLNKMFKVGFQPDIHLYTTLIAAFCRQKLMKDSEKLFDEVVKRGLVPAKETYTSMICGYCRERKINLAVKFFLRMSGHGCVPDSISYGALISGLCKESRLDKARELYDAMIDKGLSPCEVTRVTLAYEYCKTEDFASAMVILERLEKKLWIRTVHTLIRKLCCEKKVGMAALFFHKLLDKEANVDRVTLAAFMTACSESNKYSLVSDLSERISKGIG

Homology

[Close]

BLAST of Sed0017437 vs. NCBI nr
Match: XP_004145475.3 (pentatricopeptide repeat-containing protein At4g19890 [Cucumis sativus] >KGN66873.1 hypothetical protein Csa_006912 [Cucumis sativus])

HSP 1 Score: 1184.5 bits (3063), Expect = 0.0e+00
Identity = 594/708 (83.90%), Postives = 637/708 (89.97%), Query Frame = 0


Query: 1   MPLMQFSTSLRILNLHGFPFKLSSFR--SSVSASAACFS----DLIFSPHHD-SSTSSSQ 60
           +PLMQF  SLRIL  HGF  KL SF+  SS SAS A FS    D I SPHHD SS+SS Q
Sbjct: 21  IPLMQFLASLRILRPHGFLQKLCSFQQGSSASASLAFFSSTHFDSISSPHHDFSSSSSLQ 80

Query: 61  SPVQKICSLVLDSYFRQPHLRFSPSKLNLSMDADSVTHEQAISVVASLAAQEGSMVALSF 120
           SP++KICSLVLD+Y RQPHLRFSPSKLNL MDA S+THEQAIS VA LA++EGSMVALSF
Sbjct: 81  SPLKKICSLVLDTYLRQPHLRFSPSKLNLDMDAASLTHEQAISAVALLASEEGSMVALSF 140

Query: 121 FYWAIGFSKFRHFMRLYIVCAMSLIGRSNQDRAHEVVESMVGVFAEIGKLKEAVDMIFDM 180
           FYWA+GF KFR+FMRLYIVC MSL+G+ N +RAHEVVE MVGVFAEIGKLKEAVDMI DM
Sbjct: 141 FYWAVGFPKFRYFMRLYIVCTMSLVGKCNLERAHEVVECMVGVFAEIGKLKEAVDMILDM 200

Query: 181 RNQGLVLTTRVMNRVIMVAAEMGMFDYAGYVFDEMSARGVSPDSCTYKSIIVGYCRNRNV 240
           RNQGLVLTTRVMNR+I+VAAEM + +YAG VFDEMSARGV PDSCTYK IIVGYCRN NV
Sbjct: 201 RNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNV 260

Query: 241 LEVDRWISEMMERGFVVDNATLTLIINAFCEKGLVNRALGLFHKVNKMGLSPNLINYSSM 300
           LE DRWI EMMERGFVVDNATLTLII AFCEK LVNRA+  FHKV KMGLSPNLINYSSM
Sbjct: 261 LEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSM 320

Query: 301 ISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTERAFRLFLKLVRSDN 360
           ISGLCKRGSVKQAFELLEEMV+NGWKPNVYTHTSLI GLCKKGWTERAFRLFLKL+RSDN
Sbjct: 321 ISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDN 380

Query: 361 YKPNVHTYTAMISGYCKEEKLNRAEMLFERMKEQGIIPNTNTYTTLIDGHSKAGNFSRAY 420
           YKPNVHTYTAMISGYCKEEKL+RAEMLFERMKEQG++PNTNTYTTLIDGH KAGNFS+AY
Sbjct: 381 YKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAY 440

Query: 421 ELMGLMCKEGSFPNIWTYNAVVDGLCKKGRAEEAFKLLNKGVRNNIEANSVTYTILISEQ 480
           ELM LM  EG FPN  TYN++VDGLCK+GRAEEAFKLLN G +N IEA+ VTYTILISEQ
Sbjct: 441 ELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQ 500

Query: 481 CKRVDLNRALMFLNKMFKVGFQPDIHLYTTLIAAFCRQKLMKDSEKLFDEVVKRGLVPAK 540
           CKR D+N+AL+FLNKMFKVGFQPDIHLYTTLIAAFCRQ +MKDSEKLFDEV+K GL P K
Sbjct: 501 CKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTK 560

Query: 541 ETYTSMICGYCRERKINLAVKFFLRMSGHGCVPDSISYGALISGLCKESRLDKARELYDA 600
           ETYTSMICGYCRE+K++LAVKFF +MS HGC PDSISYGALISGLCKESRLD+AR+LYD 
Sbjct: 561 ETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDT 620

Query: 601 MIDKGLSPCEVTRVTLAYEYCKTEDFASAMVILERLEKKLWIRTVHTLIRKLCCEKKVGM 660
           MIDKGLSPCEVTRVTL YEYCKTEDFASAMVILERL KKLWIRTVHTLIRKLCCEKKV +
Sbjct: 621 MIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERLNKKLWIRTVHTLIRKLCCEKKVAL 680

Query: 661 AALFFHKLLDKEANVDRVTLAAFMTACSESNKYSLVSDLSERISKGIG 702
           AALFFHKLLDKE NVDRVTLAAF TAC ESNKY+LVSDLSERISKGIG
Sbjct: 681 AALFFHKLLDKEVNVDRVTLAAFNTACIESNKYALVSDLSERISKGIG 728

[Close]

BLAST of Sed0017437 vs. NCBI nr
Match: XP_038895548.1 (pentatricopeptide repeat-containing protein At4g19890 isoform X3 [Benincasa hispida])

HSP 1 Score: 1184.1 bits (3062), Expect = 0.0e+00
Identity = 600/705 (85.11%), Postives = 635/705 (90.07%), Query Frame = 0


Query: 4   MQFSTSLRILNLHGFPFKLSSF--RSSVSASAACFSDL----IFSPHHDSSTSSS-QSPV 63
           MQF  SLRIL  HGF  KL  F  RSSVSAS   FS      I S H+DSS+SSS QSPV
Sbjct: 1   MQFLASLRILRPHGFLQKLCFFQQRSSVSASMPFFSSTHLGSISSLHNDSSSSSSLQSPV 60

Query: 64  QKICSLVLDSYFRQPHLRFSPSKLNLSMDADSVTHEQAISVVASLAAQEGSMVALSFFYW 123
           Q ICSLVL +YFRQPHLRFSPSKLNL MDADS+THEQAISVVASLA++EGSMVALSFFYW
Sbjct: 61  QTICSLVLQTYFRQPHLRFSPSKLNLDMDADSLTHEQAISVVASLASEEGSMVALSFFYW 120

Query: 124 AIGFSKFRHFMRLYIVCAMSLIGRSNQDRAHEVVESMVGVFAEIGKLKEAVDMIFDMRNQ 183
           AIGF KFRHFMRLYIVC MSLIG+ N +RA EVVE MVG FAEIGKLKEAVDMIFDMRNQ
Sbjct: 121 AIGFPKFRHFMRLYIVCTMSLIGKCNLERAREVVECMVGAFAEIGKLKEAVDMIFDMRNQ 180

Query: 184 GLVLTTRVMNRVIMVAAEMGMFDYAGYVFDEMSARGVSPDSCTYKSIIVGYCRNRNVLEV 243
           GLVLTTRVMNR IMVAAEMG+ +YAG VFDEMSARGVSPDSCTYKSII GYCR  +VLE 
Sbjct: 181 GLVLTTRVMNRTIMVAAEMGLLEYAGNVFDEMSARGVSPDSCTYKSIIAGYCRIGDVLEA 240

Query: 244 DRWISEMMERGFVVDNATLTLIINAFCEKGLVNRALGLFHKVNKMGLSPNLINYSSMISG 303
           DRWI EMMERGFVVDNATLTLII AFCEK  VNRAL  FHKV+KMGLSPNLINYSSMI+G
Sbjct: 241 DRWICEMMERGFVVDNATLTLIIKAFCEKSYVNRALWFFHKVSKMGLSPNLINYSSMING 300

Query: 304 LCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTERAFRLFLKLVRSDNYKP 363
           LCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLI GLCKKGWTERAFRLFLKLVRSDNYKP
Sbjct: 301 LCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLVRSDNYKP 360

Query: 364 NVHTYTAMISGYCKEEKLNRAEMLFERMKEQGIIPNTNTYTTLIDGHSKAGNFSRAYELM 423
           NVHTYTAMISGYCKEEKLNRAEMLFERMKEQG++PNTNTYTTLIDGH KAGNFS+AYELM
Sbjct: 361 NVHTYTAMISGYCKEEKLNRAEMLFERMKEQGMVPNTNTYTTLIDGHCKAGNFSKAYELM 420

Query: 424 GLMCKEGSFPNIWTYNAVVDGLCKKGRAEEAFKLLNKGVRNNIEANSVTYTILISEQCKR 483
            LMC EG FPNI TYNA+VD LCK+GRAEEAFKLLNKG RN IEA+SVTYTILISEQCKR
Sbjct: 421 DLMCNEGFFPNICTYNAIVDSLCKRGRAEEAFKLLNKGFRNQIEADSVTYTILISEQCKR 480

Query: 484 VDLNRALMFLNKMFKVGFQPDIHLYTTLIAAFCRQKLMKDSEKLFDEVVKRGLVPAKETY 543
            D+N+ALMFLNKMFKVGFQPDIHLYTTLIAAFCR+K+MKDSEKLF EVVK GL P KETY
Sbjct: 481 ADMNQALMFLNKMFKVGFQPDIHLYTTLIAAFCREKMMKDSEKLFAEVVKLGLAPTKETY 540

Query: 544 TSMICGYCRERKINLAVKFFLRMSGHGCVPDSISYGALISGLCKESRLDKARELYDAMID 603
           TSMICGYCRERKI+LAVKFF +MS HGC PDSISYG+LISGLCKESRLD+AR+LYD MID
Sbjct: 541 TSMICGYCRERKISLAVKFFQKMSDHGCAPDSISYGSLISGLCKESRLDEARQLYDNMID 600

Query: 604 KGLSPCEVTRVTLAYEYCKTEDFASAMVILERLEKKLWIRTVHTLIRKLCCEKKVGMAAL 663
           KGLSPCEVTRVTL YEYCK EDFASAMVILE+L+KKLWI TVHTLIRKLCCEKKV MAAL
Sbjct: 601 KGLSPCEVTRVTLIYEYCKAEDFASAMVILEQLDKKLWIPTVHTLIRKLCCEKKVAMAAL 660

Query: 664 FFHKLLDKEANVDRVTLAAFMTACSESNKYSLVSDLSERISKGIG 702
           FFHKLLDK+ +VD VTLAAF+TAC ESNKY+LVSDLSERIS+GIG
Sbjct: 661 FFHKLLDKQVSVDHVTLAAFITACCESNKYALVSDLSERISRGIG 705

[Close]

BLAST of Sed0017437 vs. NCBI nr
Match: XP_008459042.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g19890 [Cucumis melo])

HSP 1 Score: 1182.5 bits (3058), Expect = 0.0e+00
Identity = 594/704 (84.38%), Postives = 636/704 (90.34%), Query Frame = 0


Query: 4   MQFSTSLRILNLHGFPFKLSSFR--SSVSASAACFS----DLIFSPHHDSSTSSSQSPVQ 63
           MQF  S RIL  HGF  KL S +  SSVSAS A FS    D I SPHHD S+SS QSPVQ
Sbjct: 1   MQFLASHRILRTHGFLQKLCSLQHGSSVSASIAFFSSTHFDSISSPHHDFSSSSLQSPVQ 60

Query: 64  KICSLVLDSYFRQPHLRFSPSKLNLSMDADSVTHEQAISVVASLAAQEGSMVALSFFYWA 123
           K CSLVL++Y RQPHLRFSPSKLNL MDADS+THEQAIS VASLA++EGSMVALSFFYWA
Sbjct: 61  KTCSLVLEAYLRQPHLRFSPSKLNLDMDADSLTHEQAISAVASLASEEGSMVALSFFYWA 120

Query: 124 IGFSKFRHFMRLYIVCAMSLIGRSNQDRAHEVVESMVGVFAEIGKLKEAVDMIFDMRNQG 183
           IGF KFR+FMRLYIVC MSLIG+ N +RAHEVVE MVGVFAEIGKLKEAVDMI DMRNQG
Sbjct: 121 IGFPKFRYFMRLYIVCTMSLIGKCNLERAHEVVECMVGVFAEIGKLKEAVDMILDMRNQG 180

Query: 184 LVLTTRVMNRVIMVAAEMGMFDYAGYVFDEMSARGVSPDSCTYKSIIVGYCRNRNVLEVD 243
           LVLTTRVMNR+I+VAA MG+ +YAG VFDEMSARGV PDSCTYKSIIVGYCRN +VLE D
Sbjct: 181 LVLTTRVMNRIILVAAGMGLVEYAGNVFDEMSARGVYPDSCTYKSIIVGYCRNGDVLEAD 240

Query: 244 RWISEMMERGFVVDNATLTLIINAFCEKGLVNRALGLFHKVNKMGLSPNLINYSSMISGL 303
           RWI EMMERGFVVDNATLTLII AFCEK LVNRA+  FHKV KMGLSPNLINYSSMISGL
Sbjct: 241 RWICEMMERGFVVDNATLTLIIKAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGL 300

Query: 304 CKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTERAFRLFLKLVRSDNYKPN 363
           CKRGSVKQAFELLEEMV+NGWKPNVYTHTSLI GLCKKGWTERAFRLFLKLVRSDNYKPN
Sbjct: 301 CKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLVRSDNYKPN 360

Query: 364 VHTYTAMISGYCKEEKLNRAEMLFERMKEQGIIPNTNTYTTLIDGHSKAGNFSRAYELMG 423
           VHTYTAMISGYCKE+KL+RAEMLFERMKEQG++PNTNTYTTLIDGH KAGNFS+AYELM 
Sbjct: 361 VHTYTAMISGYCKEDKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELME 420

Query: 424 LMCKEGSFPNIWTYNAVVDGLCKKGRAEEAFKLLNKGVRNNIEANSVTYTILISEQCKRV 483
           LM  EG FPNI TYNA+VDGLCK+GRAEEAF+LL+KG +N IEA+ VTYTILISEQCKR 
Sbjct: 421 LMSNEGFFPNICTYNAIVDGLCKRGRAEEAFELLSKGFQNQIEADGVTYTILISEQCKRA 480

Query: 484 DLNRALMFLNKMFKVGFQPDIHLYTTLIAAFCRQKLMKDSEKLFDEVVKRGLVPAKETYT 543
           D+N AL+FLNKMFKVGFQPDIHLYTTLIAAFCRQ++MKDSEKLFDEVVK GL P KETYT
Sbjct: 481 DMNHALVFLNKMFKVGFQPDIHLYTTLIAAFCRQRMMKDSEKLFDEVVKLGLAPTKETYT 540

Query: 544 SMICGYCRERKINLAVKFFLRMSGHGCVPDSISYGALISGLCKESRLDKARELYDAMIDK 603
           SMICGYCRE+ I+LAVKFF +MS  GC PDSISYGALISGLCKESRLD+AR+LYD MIDK
Sbjct: 541 SMICGYCREKNISLAVKFFQKMSDQGCAPDSISYGALISGLCKESRLDEARQLYDTMIDK 600

Query: 604 GLSPCEVTRVTLAYEYCKTEDFASAMVILERLEKKLWIRTVHTLIRKLCCEKKVGMAALF 663
           GLSPCEVTRV+LAYEYCKTED ASAMVILERL KKLWIRTVHTLIRKLCCEKKV +AALF
Sbjct: 601 GLSPCEVTRVSLAYEYCKTEDCASAMVILERLNKKLWIRTVHTLIRKLCCEKKVALAALF 660

Query: 664 FHKLLDKEANVDRVTLAAFMTACSESNKYSLVSDLSERISKGIG 702
           FHKLLDKE NVDRVTLAAF+TAC+ESNKY+LVSDLSERISKGIG
Sbjct: 661 FHKLLDKEVNVDRVTLAAFITACTESNKYALVSDLSERISKGIG 704

[Close]

BLAST of Sed0017437 vs. NCBI nr
Match: XP_022954541.1 (pentatricopeptide repeat-containing protein At4g19890 [Cucurbita moschata])

HSP 1 Score: 1179.5 bits (3050), Expect = 0.0e+00
Identity = 592/711 (83.26%), Postives = 640/711 (90.01%), Query Frame = 0


Query: 1   MPLMQFSTSLRILNLHGFPFKLS-SFRSSVSASAACFS----DLIFSPHHDSSTSSS--- 60
           MP MQF  S+RIL LHGF  K S   R SVSASA  FS    D I SP+ DSS+SSS   
Sbjct: 1   MPSMQFLASIRILRLHGFLHKFSFPQRLSVSASAGVFSSSHFDSISSPYRDSSSSSSSSS 60

Query: 61  --QSPVQKICSLVLDSYFRQPHLRFSPSKLNLSMDADSVTHEQAISVVASLAAQEGSMVA 120
             QSPVQ ICSLV++SYFRQPHLRFSP KLNL MDAD +THEQAISVVASLA++EGSM+A
Sbjct: 61  SLQSPVQTICSLVVESYFRQPHLRFSPFKLNLDMDADFLTHEQAISVVASLASEEGSMMA 120

Query: 121 LSFFYWAIGFSKFRHFMRLYIVCAMSLIGRSNQDRAHEVVESMVGVFAEIGKLKEAVDMI 180
           LSFFYWAIGF KFR+FMRLYIVC M L+G+  Q+RA EVVE M+GVFAEIGKLKEAVDMI
Sbjct: 121 LSFFYWAIGFPKFRYFMRLYIVCTMLLVGKCKQERADEVVECMIGVFAEIGKLKEAVDMI 180

Query: 181 FDMRNQGLVLTTRVMNRVIMVAAEMGMFDYAGYVFDEMSARGVSPDSCTYKSIIVGYCRN 240
            DMRNQGLVLTTRVMNR+IMVAAEMG+ +YAG +FDEMSARG++P+SCTYKSIIVGYCR 
Sbjct: 181 IDMRNQGLVLTTRVMNRIIMVAAEMGLLEYAGNMFDEMSARGMAPNSCTYKSIIVGYCRY 240

Query: 241 RNVLEVDRWISEMMERGFVVDNATLTLIINAFCEKGLVNRALGLFHKVNKMGLSPNLINY 300
            NVL+VDRW++EMMERGFVVDNATLTLIINAFC+KG V+RA  LFHKV KMGLSPNLINY
Sbjct: 241 GNVLDVDRWLNEMMERGFVVDNATLTLIINAFCKKGFVSRAFWLFHKVKKMGLSPNLINY 300

Query: 301 SSMISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTERAFRLFLKLVR 360
           SSMISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWT+RAFRLFLKLVR
Sbjct: 301 SSMISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTDRAFRLFLKLVR 360

Query: 361 SDNYKPNVHTYTAMISGYCKEEKLNRAEMLFERMKEQGIIPNTNTYTTLIDGHSKAGNFS 420
           SD YKPNV+TYTAMISGYCKEEKLNRAEMLFERMKEQG++PNTNTYTTLIDGH KAGNFS
Sbjct: 361 SDIYKPNVYTYTAMISGYCKEEKLNRAEMLFERMKEQGMVPNTNTYTTLIDGHCKAGNFS 420

Query: 421 RAYELMGLMCKEGSFPNIWTYNAVVDGLCKKGRAEEAFKLLNKGVRNNIEANSVTYTILI 480
           RAYELM +MC EG FPNI TYNA+VDGLCKKGR EEAFKLLNKG RN +EA++VTY ILI
Sbjct: 421 RAYELMEVMCNEGFFPNICTYNAIVDGLCKKGRVEEAFKLLNKGCRNRVEADAVTYNILI 480

Query: 481 SEQCKRVDLNRALMFLNKMFKVGFQPDIHLYTTLIAAFCRQKLMKDSEKLFDEVVKRGLV 540
           SEQCK  DLNRALMFL KM KVGFQPD+HLYTTLI+AFCRQK+M DSEKLFDEVVK G V
Sbjct: 481 SEQCKHADLNRALMFLTKMLKVGFQPDVHLYTTLISAFCRQKMMNDSEKLFDEVVKLGFV 540

Query: 541 PAKETYTSMICGYCRERKINLAVKFFLRMSGHGCVPDSISYGALISGLCKESRLDKAREL 600
           P KETYTSMICGYCRERKI+LAVKFF RM+ HGC PDSISYGALISGLCKESRLD+AR+L
Sbjct: 541 PTKETYTSMICGYCRERKIDLAVKFFQRMNVHGCAPDSISYGALISGLCKESRLDEARQL 600

Query: 601 YDAMIDKGLSPCEVTRVTLAYEYCKTEDFASAMVILERLEKKLWIRTVHTLIRKLCCEKK 660
           YD MID GL+PCEVTRVTLAYEYCKTE+FASAMVILERL+KKLWIRTVHTLIRKLC EKK
Sbjct: 601 YDVMIDNGLTPCEVTRVTLAYEYCKTEEFASAMVILERLDKKLWIRTVHTLIRKLCSEKK 660

Query: 661 VGMAALFFHKLLDKEANVDRVTLAAFMTACSESNKYSLVSDLSERISKGIG 702
           VGMAALFFHKLLDKE NVDRV+LAAFMTAC ESNKY+LVSDL+ERISKGIG
Sbjct: 661 VGMAALFFHKLLDKEVNVDRVSLAAFMTACCESNKYALVSDLTERISKGIG 711

[Close]

BLAST of Sed0017437 vs. NCBI nr
Match: KAA0043201.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK12267.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1179.1 bits (3049), Expect = 0.0e+00
Identity = 592/703 (84.21%), Postives = 635/703 (90.33%), Query Frame = 0


Query: 4   MQFSTSLRILNLHGFPFKLSSFR--SSVSASAACFS----DLIFSPHHDSSTSSSQSPVQ 63
           MQF  S RIL  HGF  KL S +  SSVSAS A FS    D I SPHHD S+SS QSPVQ
Sbjct: 1   MQFLASHRILRTHGFLQKLCSLQHGSSVSASIAFFSSTHFDSISSPHHDFSSSSLQSPVQ 60

Query: 64  KICSLVLDSYFRQPHLRFSPSKLNLSMDADSVTHEQAISVVASLAAQEGSMVALSFFYWA 123
           K CSLVL++Y RQPHLRFSPSKLNL MDADS+THEQAIS VASLA++EGSMVALSFFYWA
Sbjct: 61  KTCSLVLEAYLRQPHLRFSPSKLNLDMDADSLTHEQAISAVASLASEEGSMVALSFFYWA 120

Query: 124 IGFSKFRHFMRLYIVCAMSLIGRSNQDRAHEVVESMVGVFAEIGKLKEAVDMIFDMRNQG 183
           IGF KFR+FMRLYIVC MSLIG+ N +RAHEVVE MVGVFAEIGKLKEAVDMI DMRNQG
Sbjct: 121 IGFPKFRYFMRLYIVCTMSLIGKCNLERAHEVVECMVGVFAEIGKLKEAVDMILDMRNQG 180

Query: 184 LVLTTRVMNRVIMVAAEMGMFDYAGYVFDEMSARGVSPDSCTYKSIIVGYCRNRNVLEVD 243
           LVLTTRVMNR+I+VAA MG+ +YAG VFDEMSARGV PDSCTYKSIIVGYCRN +VLE D
Sbjct: 181 LVLTTRVMNRIILVAAGMGLVEYAGNVFDEMSARGVYPDSCTYKSIIVGYCRNGDVLEAD 240

Query: 244 RWISEMMERGFVVDNATLTLIINAFCEKGLVNRALGLFHKVNKMGLSPNLINYSSMISGL 303
           RWI EMMERGFVVDNATLTLII AFCEK LVNRA+  FHKV KMGLSPNLINYSSMISGL
Sbjct: 241 RWICEMMERGFVVDNATLTLIIKAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGL 300

Query: 304 CKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTERAFRLFLKLVRSDNYKPN 363
           CKRGSVKQAFELLEEMV+NGWKPNVYTHTSLI GLCKKGWTERAFRLFLKLVRSDNYKPN
Sbjct: 301 CKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLVRSDNYKPN 360

Query: 364 VHTYTAMISGYCKEEKLNRAEMLFERMKEQGIIPNTNTYTTLIDGHSKAGNFSRAYELMG 423
           VHTYTAMISGYCKE+KL+RAEMLFERMKEQG++PNTNTYTTLIDGH KAGNFS+AYELM 
Sbjct: 361 VHTYTAMISGYCKEDKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELME 420

Query: 424 LMCKEGSFPNIWTYNAVVDGLCKKGRAEEAFKLLNKGVRNNIEANSVTYTILISEQCKRV 483
           LM  EG FPNI TYNA+VDGLCK+GRAEEAF+LL+KG +N IEA+ VTYTILISEQCKR 
Sbjct: 421 LMSNEGFFPNICTYNAIVDGLCKRGRAEEAFELLSKGFQNQIEADGVTYTILISEQCKRA 480

Query: 484 DLNRALMFLNKMFKVGFQPDIHLYTTLIAAFCRQKLMKDSEKLFDEVVKRGLVPAKETYT 543
           D+N AL+FLNKMFKVGFQPDIHLYTTLIAAFCRQ++MKDSEKLFDEVVK GL P KETYT
Sbjct: 481 DMNHALVFLNKMFKVGFQPDIHLYTTLIAAFCRQRMMKDSEKLFDEVVKLGLAPTKETYT 540

Query: 544 SMICGYCRERKINLAVKFFLRMSGHGCVPDSISYGALISGLCKESRLDKARELYDAMIDK 603
           SMICGYCRE+ I+LAVKFF +MS  GC PDSISYGALISGLCKESRLD+AR+LYD MIDK
Sbjct: 541 SMICGYCREKNISLAVKFFQKMSDQGCAPDSISYGALISGLCKESRLDEARQLYDTMIDK 600

Query: 604 GLSPCEVTRVTLAYEYCKTEDFASAMVILERLEKKLWIRTVHTLIRKLCCEKKVGMAALF 663
           GLSPCEVTRV+LAYEYCKTED ASAMVILERL KKLWIRTVHTLIRKLCCEKKV +AALF
Sbjct: 601 GLSPCEVTRVSLAYEYCKTEDCASAMVILERLNKKLWIRTVHTLIRKLCCEKKVALAALF 660

Query: 664 FHKLLDKEANVDRVTLAAFMTACSESNKYSLVSDLSERISKGI 701
           FHKLLDKE NVDRVTLAAF+TAC+ESNKY+LVSDLSERISKG+
Sbjct: 661 FHKLLDKEVNVDRVTLAAFITACTESNKYALVSDLSERISKGM 703

[Close]

BLAST of Sed0017437 vs. ExPASy Swiss-Prot
Match: P0C8Q3 (Pentatricopeptide repeat-containing protein At4g19890 OS=Arabidopsis thaliana OX=3702 GN=At4g19890 PE=2 SV=1)

HSP 1 Score: 885.9 bits (2288), Expect = 2.9e-256
Identity = 438/690 (63.48%), Postives = 539/690 (78.12%), Query Frame = 0


Query: 20  FKLSSFRSSVSASAACFSDLIFSPHHDS--------STSSSQSPVQKICSLVLDSYFRQP 79
           F L +F    S  +  F  LI S H  S        S+S SQ  V+ +CSLV  SY RQ 
Sbjct: 12  FLLRTFEIPNSLCSLFFFRLISSDHESSDLSLPSSPSSSPSQCLVKSVCSLVCTSYLRQN 71

Query: 80  HLRFSPSKLNLSMDADSVTHEQAISVVASLAAQEGSMVALSFFYWAIGFSKFRHFMRLYI 139
           H+  SP ++NL  DA+S+THEQAI+VVASLA++ GSMVAL FFYWA+GF KFRHFMRLY+
Sbjct: 72  HVVSSPHRVNLDFDANSLTHEQAITVVASLASESGSMVALCFFYWAVGFEKFRHFMRLYL 131

Query: 140 VCAMSLIGRSNQDRAHEVVESMVGVFAEIGKLKEAVDMIFDMRNQGLVLTTRVMNRVIMV 199
           V A SL+   N  +AHEV+  M+  F+EIG+L EAV M+ DM+NQGL  ++  MN V+ +
Sbjct: 132 VTADSLLANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEI 191

Query: 200 AAEMGMFDYAGYVFDEMSARGVSPDSCTYKSIIVGYCRNRNVLEVDRWISEMMERGFVVD 259
           A E+G+ +YA  VFDEMS RGV PDS +YK +++G  R+  + E DRW++ M++RGF+ D
Sbjct: 192 AVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPD 251

Query: 260 NATLTLIINAFCEKGLVNRALGLFHKVNKMGLSPNLINYSSMISGLCKRGSVKQAFELLE 319
           NAT TLI+ A CE GLVNRA+  F K+  +G  PNLIN++S+I GLCK+GS+KQAFE+LE
Sbjct: 252 NATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLE 311

Query: 320 EMVRNGWKPNVYTHTSLIDGLCKKGWTERAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 379
           EMVRNGWKPNVYTHT+LIDGLCK+GWTE+AFRLFLKLVRSD YKPNVHTYT+MI GYCKE
Sbjct: 312 EMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKE 371

Query: 380 EKLNRAEMLFERMKEQGIIPNTNTYTTLIDGHSKAGNFSRAYELMGLMCKEGSFPNIWTY 439
           +KLNRAEMLF RMKEQG+ PN NTYTTLI+GH KAG+F RAYELM LM  EG  PNI+TY
Sbjct: 372 DKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTY 431

Query: 440 NAVVDGLCKKGRAEEAFKLLNKGVRNNIEANSVTYTILISEQCKRVDLNRALMFLNKMFK 499
           NA +D LCKK RA EA++LLNK     +EA+ VTYTILI EQCK+ D+N+AL F  +M K
Sbjct: 432 NAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNK 491

Query: 500 VGFQPDIHLYTTLIAAFCRQKLMKDSEKLFDEVVKRGLVPAKETYTSMICGYCRERKINL 559
            GF+ D+ L   LIAAFCRQK MK+SE+LF  VV  GL+P KETYTSMI  YC+E  I+L
Sbjct: 492 TGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDL 551

Query: 560 AVKFFLRMSGHGCVPDSISYGALISGLCKESRLDKARELYDAMIDKGLSPCEVTRVTLAY 619
           A+K+F  M  HGCVPDS +YG+LISGLCK+S +D+A +LY+AMID+GLSP EVTRVTLAY
Sbjct: 552 ALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAY 611

Query: 620 EYCKTEDFASAMVILERLEKKLWIRTVHTLIRKLCCEKKVGMAALFFHKLLDKEANVDRV 679
           EYCK  D A+AM++LE L+KKLWIRTV TL+RKLC EKKVG+AALFF KLL+K+++ DRV
Sbjct: 612 EYCKRNDSANAMILLEPLDKKLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRV 671

Query: 680 TLAAFMTACSESNKYSLVSDLSERISKGIG 702
           TLAAF TACSES K +LV+DL+ERIS+G+G
Sbjct: 672 TLAAFTTACSESGKNNLVTDLTERISRGVG 701

[Close]

BLAST of Sed0017437 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.7e-68
Identity = 140/428 (32.71%), Postives = 239/428 (55.84%), Query Frame = 0


Query: 200 YAGYVFDEMSARGVSPDSCTYKSIIVGYCRNRNVLEVDRWISEMMERGFVVDNATLTLII 259
           +A  VF EM    VSP+  TY  +I G+C   N+        +M  +G + +  T   +I
Sbjct: 188 FAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLI 247

Query: 260 NAFCEKGLVNRALGLFHKVNKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVRNGWK 319
           + +C+   ++    L   +   GL PNLI+Y+ +I+GLC+ G +K+   +L EM R G+ 
Sbjct: 248 DGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYS 307

Query: 320 PNVYTHTSLIDGLCKKGWTERAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKLNRAEM 379
            +  T+ +LI G CK+G   +A  +  +++R     P+V TYT++I   CK   +NRA  
Sbjct: 308 LDEVTYNTLIKGYCKEGNFHQALVMHAEMLR-HGLTPSVITYTSLIHSMCKAGNMNRAME 367

Query: 380 LFERMKEQGIIPNTNTYTTLIDGHSKAGNFSRAYELMGLMCKEGSFPNIWTYNAVVDGLC 439
             ++M+ +G+ PN  TYTTL+DG S+ G  + AY ++  M   G  P++ TYNA+++G C
Sbjct: 368 FLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHC 427

Query: 440 KKGRAEEAFKLLNKGVRNNIEANSVTYTILISEQCKRVDLNRALMFLNKMFKVGFQPDIH 499
             G+ E+A  +L       +  + V+Y+ ++S  C+  D++ AL    +M + G +PD  
Sbjct: 428 VTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTI 487

Query: 500 LYTTLIAAFCRQKLMKDSEKLFDEVVKRGLVPAKETYTSMICGYCRERKINLAVKFFLRM 559
            Y++LI  FC Q+  K++  L++E+++ GL P + TYT++I  YC E  +  A++    M
Sbjct: 488 TYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEM 547

Query: 560 SGHGCVPDSISYGALISGLCKESRLDKARELYDAMIDKGLSPCEVTRVTLAYEYCKTEDF 619
              G +PD ++Y  LI+GL K+SR  +A+ L   +  +   P +VT  TL  E C   +F
Sbjct: 548 VEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTL-IENCSNIEF 607

Query: 620 ASAMVILE 628
            S + +++
Sbjct: 608 KSVVSLIK 613

[Close]

BLAST of Sed0017437 vs. ExPASy Swiss-Prot
Match: Q9T0D6 (Pentatricopeptide repeat-containing protein At4g11690 OS=Arabidopsis thaliana OX=3702 GN=At4g11690 PE=2 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 2.3e-67
Identity = 144/451 (31.93%), Postives = 234/451 (51.88%), Query Frame = 0


Query: 151 ESMVGVFAEIGKLKEAVDMIFDMRNQGLVLTTRVMNRVIMVAAEMGMFDYAGYVFDEMSA 210
           E ++  + +   L  ++    +M + G V  +   N ++        F+     F+E  +
Sbjct: 98  EVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKS 157

Query: 211 RGVSPDSCTYKSIIVGYCRNRNVLEVDRWISEMMERGFVVDNATLTLIINAFCEKGLVNR 270
           + V  D  ++  +I G C    + +    + E+ E GF  +    T +I+  C+KG + +
Sbjct: 158 K-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEK 217

Query: 271 ALGLFHKVNKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLID 330
           A  LF ++ K+GL  N   Y+ +I+GL K G  KQ FE+ E+M  +G  PN+YT+  +++
Sbjct: 218 AKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMN 277

Query: 331 GLCKKGWTERAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKLNRAEMLFERMKEQGII 390
            LCK G T+ AF++F ++ R      N+ TY  +I G C+E KLN A  + ++MK  GI 
Sbjct: 278 QLCKDGRTKDAFQVFDEM-RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 337

Query: 391 PNTNTYTTLIDGHSKAGNFSRAYELMGLMCKEGSFPNIWTYNAVVDGLCKKGRAEEAFKL 450
           PN  TY TLIDG    G   +A  L   +   G  P++ TYN +V G C+KG    A K+
Sbjct: 338 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 397

Query: 451 LNKGVRNNIEANSVTYTILISEQCKRVDLNRALMFLNKMFKVGFQPDIHLYTTLIAAFCR 510
           + +     I+ + VTYTILI    +  ++ +A+     M ++G  PD+H Y+ LI  FC 
Sbjct: 398 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCI 457

Query: 511 QKLMKDSEKLFDEVVKRGLVPAKETYTSMICGYCRERKINLAVKFFLRMSGHGCVPDSIS 570
           +  M ++ +LF  +V++   P +  Y +MI GYC+E     A+K    M      P+  S
Sbjct: 458 KGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVAS 517

Query: 571 YGALISGLCKESRLDKARELYDAMIDKGLSP 602
           Y  +I  LCKE +  +A  L + MID G+ P
Sbjct: 518 YRYMIEVLCKERKSKEAERLVEKMIDSGIDP 546

[Close]

BLAST of Sed0017437 vs. ExPASy Swiss-Prot
Match: Q9CA58 (Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis thaliana OX=3702 GN=At1g74580 PE=3 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 6.5e-67
Identity = 154/477 (32.29%), Postives = 244/477 (51.15%), Query Frame = 0


Query: 161 GKLKEAVDMIFDMRNQGLVLTTRVMNRVIMVAAEMGMFDYAGYVFDEMSARGVSPDSCTY 220
           G+L  AV M+  +  QG        N +I    +   F  A     +M   G+ PDS TY
Sbjct: 265 GELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTY 324

Query: 221 KSIIVGYCRNRNVLEVDRWISEMMERGFVVDNATLTLIINAFCEKGLVNRALGLFHKVNK 280
            ++I GYC+   V   +R + + +  GFV D  T   +I+  C +G  NRAL LF++   
Sbjct: 325 NTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALG 384

Query: 281 MGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTER 340
            G+ PN+I Y+++I GL  +G + +A +L  EM   G  P V T   L++GLCK G    
Sbjct: 385 KGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSD 444

Query: 341 AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKLNRAEMLFERMKEQGIIPNTNTYTTLI 400
           A  L +K++ S  Y P++ T+  +I GY  + K+  A  + + M + G+ P+  TY +L+
Sbjct: 445 ADGL-VKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLL 504

Query: 401 DGHSKAGNFSRAYELMGLMCKEGSFPNIWTYNAVVDGLCKKGRAEEAFKLLNKGVRNNIE 460
           +G  K   F    E    M ++G  PN++T+N +++ LC+  + +EA  LL +    ++ 
Sbjct: 505 NGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVN 564

Query: 461 ANSVTYTILISEQCKRVDLNRALMFLNKM---FKVGFQPDIHLYTTLIAAFCRQKLMKDS 520
            ++VT+  LI   CK  DL+ A     KM   +KV        Y  +I AF  +  +  +
Sbjct: 565 PDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKV--SSSTPTYNIIIHAFTEKLNVTMA 624

Query: 521 EKLFDEVVKRGLVPAKETYTSMICGYCRERKINLAVKFFLRMSGHGCVPDSISYGALISG 580
           EKLF E+V R L P   TY  M+ G+C+   +NL  KF L M  +G +P   + G +I+ 
Sbjct: 625 EKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINC 684

Query: 581 LCKESRLDKARELYDAMIDKGLSPCEVTRVTLAYEYCKTE--DFASAMVILERLEKK 633
           LC E R+ +A  +   M+ KGL P  V  +      C  +  + A+  ++LE L KK
Sbjct: 685 LCVEDRVYEAAGIIHRMVQKGLVPEAVNTI------CDVDKKEVAAPKLVLEDLLKK 732

[Close]

BLAST of Sed0017437 vs. ExPASy Swiss-Prot
Match: Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 8.6e-67
Identity = 144/471 (30.57%), Postives = 238/471 (50.53%), Query Frame = 0


Query: 162 KLKEAVDMIFDMRNQGLVLTTRVMNRVIMVAAEMGMFDYAGYVFDEMSARGVSPDSCTYK 221
           K   A+ +  +    G+       N VI    ++G    A ++   M  +G +PD  +Y 
Sbjct: 226 KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYS 285

Query: 222 SIIVGYCRNRNVLEVDRWISEMMERGFVVDNATLTLIINAFCEKGLVNRALGLFHKVNKM 281
           +++ GYCR   + +V + I  M  +G   ++     II   C    +  A   F ++ + 
Sbjct: 286 TVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345

Query: 282 GLSPNLINYSSMISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTERA 341
           G+ P+ + Y+++I G CKRG ++ A +   EM      P+V T+T++I G C+ G    A
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405

Query: 342 FRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKLNRAEMLFERMKEQGIIPNTNTYTTLID 401
            +LF ++      +P+  T+T +I+GYCK   +  A  +   M + G  PN  TYTTLID
Sbjct: 406 GKLFHEMF-CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID 465

Query: 402 GHSKAGNFSRAYELMGLMCKEGSFPNIWTYNAVVDGLCKKGRAEEAFKLLNKGVRNNIEA 461
           G  K G+   A EL+  M K G  PNI+TYN++V+GLCK G  EEA KL+ +     + A
Sbjct: 466 GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA 525

Query: 462 NSVTYTILISEQCKRVDLNRALMFLNKMFKVGFQPDIHLYTTLIAAFCRQKLMKDSEKLF 521
           ++VTYT L+   CK  ++++A   L +M   G QP I  +  L+  FC   +++D EKL 
Sbjct: 526 DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 585

Query: 522 DEVVKRGLVPAKETYTSMICGYCRERKINLAVKFFLRMSGHGCVPDSISYGALISGLCKE 581
           + ++ +G+ P   T+ S++  YC    +  A   +  M   G  PD  +Y  L+ G CK 
Sbjct: 586 NWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKA 645

Query: 582 SRLDKARELYDAMIDKGLSPCEVTRVTLAYEYCKTEDFASAMVILERLEKK 633
             + +A  L+  M  KG S    T   L   + K + F  A  + +++ ++
Sbjct: 646 RNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 695

[Close]

BLAST of Sed0017437 vs. ExPASy TrEMBL
Match: A0A0A0LYL9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G701980 PE=4 SV=1)

HSP 1 Score: 1184.5 bits (3063), Expect = 0.0e+00
Identity = 594/708 (83.90%), Postives = 637/708 (89.97%), Query Frame = 0


Query: 1   MPLMQFSTSLRILNLHGFPFKLSSFR--SSVSASAACFS----DLIFSPHHD-SSTSSSQ 60
           +PLMQF  SLRIL  HGF  KL SF+  SS SAS A FS    D I SPHHD SS+SS Q
Sbjct: 21  IPLMQFLASLRILRPHGFLQKLCSFQQGSSASASLAFFSSTHFDSISSPHHDFSSSSSLQ 80

Query: 61  SPVQKICSLVLDSYFRQPHLRFSPSKLNLSMDADSVTHEQAISVVASLAAQEGSMVALSF 120
           SP++KICSLVLD+Y RQPHLRFSPSKLNL MDA S+THEQAIS VA LA++EGSMVALSF
Sbjct: 81  SPLKKICSLVLDTYLRQPHLRFSPSKLNLDMDAASLTHEQAISAVALLASEEGSMVALSF 140

Query: 121 FYWAIGFSKFRHFMRLYIVCAMSLIGRSNQDRAHEVVESMVGVFAEIGKLKEAVDMIFDM 180
           FYWA+GF KFR+FMRLYIVC MSL+G+ N +RAHEVVE MVGVFAEIGKLKEAVDMI DM
Sbjct: 141 FYWAVGFPKFRYFMRLYIVCTMSLVGKCNLERAHEVVECMVGVFAEIGKLKEAVDMILDM 200

Query: 181 RNQGLVLTTRVMNRVIMVAAEMGMFDYAGYVFDEMSARGVSPDSCTYKSIIVGYCRNRNV 240
           RNQGLVLTTRVMNR+I+VAAEM + +YAG VFDEMSARGV PDSCTYK IIVGYCRN NV
Sbjct: 201 RNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNV 260

Query: 241 LEVDRWISEMMERGFVVDNATLTLIINAFCEKGLVNRALGLFHKVNKMGLSPNLINYSSM 300
           LE DRWI EMMERGFVVDNATLTLII AFCEK LVNRA+  FHKV KMGLSPNLINYSSM
Sbjct: 261 LEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSM 320

Query: 301 ISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTERAFRLFLKLVRSDN 360
           ISGLCKRGSVKQAFELLEEMV+NGWKPNVYTHTSLI GLCKKGWTERAFRLFLKL+RSDN
Sbjct: 321 ISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDN 380

Query: 361 YKPNVHTYTAMISGYCKEEKLNRAEMLFERMKEQGIIPNTNTYTTLIDGHSKAGNFSRAY 420
           YKPNVHTYTAMISGYCKEEKL+RAEMLFERMKEQG++PNTNTYTTLIDGH KAGNFS+AY
Sbjct: 381 YKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAY 440

Query: 421 ELMGLMCKEGSFPNIWTYNAVVDGLCKKGRAEEAFKLLNKGVRNNIEANSVTYTILISEQ 480
           ELM LM  EG FPN  TYN++VDGLCK+GRAEEAFKLLN G +N IEA+ VTYTILISEQ
Sbjct: 441 ELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQ 500

Query: 481 CKRVDLNRALMFLNKMFKVGFQPDIHLYTTLIAAFCRQKLMKDSEKLFDEVVKRGLVPAK 540
           CKR D+N+AL+FLNKMFKVGFQPDIHLYTTLIAAFCRQ +MKDSEKLFDEV+K GL P K
Sbjct: 501 CKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTK 560

Query: 541 ETYTSMICGYCRERKINLAVKFFLRMSGHGCVPDSISYGALISGLCKESRLDKARELYDA 600
           ETYTSMICGYCRE+K++LAVKFF +MS HGC PDSISYGALISGLCKESRLD+AR+LYD 
Sbjct: 561 ETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDT 620

Query: 601 MIDKGLSPCEVTRVTLAYEYCKTEDFASAMVILERLEKKLWIRTVHTLIRKLCCEKKVGM 660
           MIDKGLSPCEVTRVTL YEYCKTEDFASAMVILERL KKLWIRTVHTLIRKLCCEKKV +
Sbjct: 621 MIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERLNKKLWIRTVHTLIRKLCCEKKVAL 680

Query: 661 AALFFHKLLDKEANVDRVTLAAFMTACSESNKYSLVSDLSERISKGIG 702
           AALFFHKLLDKE NVDRVTLAAF TAC ESNKY+LVSDLSERISKGIG
Sbjct: 681 AALFFHKLLDKEVNVDRVTLAAFNTACIESNKYALVSDLSERISKGIG 728

[Close]

BLAST of Sed0017437 vs. ExPASy TrEMBL
Match: A0A1S3CAH0 (pentatricopeptide repeat-containing protein At4g19890 OS=Cucumis melo OX=3656 GN=LOC103498266 PE=4 SV=1)

HSP 1 Score: 1182.5 bits (3058), Expect = 0.0e+00
Identity = 594/704 (84.38%), Postives = 636/704 (90.34%), Query Frame = 0


Query: 4   MQFSTSLRILNLHGFPFKLSSFR--SSVSASAACFS----DLIFSPHHDSSTSSSQSPVQ 63
           MQF  S RIL  HGF  KL S +  SSVSAS A FS    D I SPHHD S+SS QSPVQ
Sbjct: 1   MQFLASHRILRTHGFLQKLCSLQHGSSVSASIAFFSSTHFDSISSPHHDFSSSSLQSPVQ 60

Query: 64  KICSLVLDSYFRQPHLRFSPSKLNLSMDADSVTHEQAISVVASLAAQEGSMVALSFFYWA 123
           K CSLVL++Y RQPHLRFSPSKLNL MDADS+THEQAIS VASLA++EGSMVALSFFYWA
Sbjct: 61  KTCSLVLEAYLRQPHLRFSPSKLNLDMDADSLTHEQAISAVASLASEEGSMVALSFFYWA 120

Query: 124 IGFSKFRHFMRLYIVCAMSLIGRSNQDRAHEVVESMVGVFAEIGKLKEAVDMIFDMRNQG 183
           IGF KFR+FMRLYIVC MSLIG+ N +RAHEVVE MVGVFAEIGKLKEAVDMI DMRNQG
Sbjct: 121 IGFPKFRYFMRLYIVCTMSLIGKCNLERAHEVVECMVGVFAEIGKLKEAVDMILDMRNQG 180

Query: 184 LVLTTRVMNRVIMVAAEMGMFDYAGYVFDEMSARGVSPDSCTYKSIIVGYCRNRNVLEVD 243
           LVLTTRVMNR+I+VAA MG+ +YAG VFDEMSARGV PDSCTYKSIIVGYCRN +VLE D
Sbjct: 181 LVLTTRVMNRIILVAAGMGLVEYAGNVFDEMSARGVYPDSCTYKSIIVGYCRNGDVLEAD 240

Query: 244 RWISEMMERGFVVDNATLTLIINAFCEKGLVNRALGLFHKVNKMGLSPNLINYSSMISGL 303
           RWI EMMERGFVVDNATLTLII AFCEK LVNRA+  FHKV KMGLSPNLINYSSMISGL
Sbjct: 241 RWICEMMERGFVVDNATLTLIIKAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGL 300

Query: 304 CKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTERAFRLFLKLVRSDNYKPN 363
           CKRGSVKQAFELLEEMV+NGWKPNVYTHTSLI GLCKKGWTERAFRLFLKLVRSDNYKPN
Sbjct: 301 CKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLVRSDNYKPN 360

Query: 364 VHTYTAMISGYCKEEKLNRAEMLFERMKEQGIIPNTNTYTTLIDGHSKAGNFSRAYELMG 423
           VHTYTAMISGYCKE+KL+RAEMLFERMKEQG++PNTNTYTTLIDGH KAGNFS+AYELM 
Sbjct: 361 VHTYTAMISGYCKEDKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELME 420

Query: 424 LMCKEGSFPNIWTYNAVVDGLCKKGRAEEAFKLLNKGVRNNIEANSVTYTILISEQCKRV 483
           LM  EG FPNI TYNA+VDGLCK+GRAEEAF+LL+KG +N IEA+ VTYTILISEQCKR 
Sbjct: 421 LMSNEGFFPNICTYNAIVDGLCKRGRAEEAFELLSKGFQNQIEADGVTYTILISEQCKRA 480

Query: 484 DLNRALMFLNKMFKVGFQPDIHLYTTLIAAFCRQKLMKDSEKLFDEVVKRGLVPAKETYT 543
           D+N AL+FLNKMFKVGFQPDIHLYTTLIAAFCRQ++MKDSEKLFDEVVK GL P KETYT
Sbjct: 481 DMNHALVFLNKMFKVGFQPDIHLYTTLIAAFCRQRMMKDSEKLFDEVVKLGLAPTKETYT 540

Query: 544 SMICGYCRERKINLAVKFFLRMSGHGCVPDSISYGALISGLCKESRLDKARELYDAMIDK 603
           SMICGYCRE+ I+LAVKFF +MS  GC PDSISYGALISGLCKESRLD+AR+LYD MIDK
Sbjct: 541 SMICGYCREKNISLAVKFFQKMSDQGCAPDSISYGALISGLCKESRLDEARQLYDTMIDK 600

Query: 604 GLSPCEVTRVTLAYEYCKTEDFASAMVILERLEKKLWIRTVHTLIRKLCCEKKVGMAALF 663
           GLSPCEVTRV+LAYEYCKTED ASAMVILERL KKLWIRTVHTLIRKLCCEKKV +AALF
Sbjct: 601 GLSPCEVTRVSLAYEYCKTEDCASAMVILERLNKKLWIRTVHTLIRKLCCEKKVALAALF 660

Query: 664 FHKLLDKEANVDRVTLAAFMTACSESNKYSLVSDLSERISKGIG 702
           FHKLLDKE NVDRVTLAAF+TAC+ESNKY+LVSDLSERISKGIG
Sbjct: 661 FHKLLDKEVNVDRVTLAAFITACTESNKYALVSDLSERISKGIG 704

[Close]

BLAST of Sed0017437 vs. ExPASy TrEMBL
Match: A0A6J1GR66 (pentatricopeptide repeat-containing protein At4g19890 OS=Cucurbita moschata OX=3662 GN=LOC111456781 PE=4 SV=1)

HSP 1 Score: 1179.5 bits (3050), Expect = 0.0e+00
Identity = 592/711 (83.26%), Postives = 640/711 (90.01%), Query Frame = 0


Query: 1   MPLMQFSTSLRILNLHGFPFKLS-SFRSSVSASAACFS----DLIFSPHHDSSTSSS--- 60
           MP MQF  S+RIL LHGF  K S   R SVSASA  FS    D I SP+ DSS+SSS   
Sbjct: 1   MPSMQFLASIRILRLHGFLHKFSFPQRLSVSASAGVFSSSHFDSISSPYRDSSSSSSSSS 60

Query: 61  --QSPVQKICSLVLDSYFRQPHLRFSPSKLNLSMDADSVTHEQAISVVASLAAQEGSMVA 120
             QSPVQ ICSLV++SYFRQPHLRFSP KLNL MDAD +THEQAISVVASLA++EGSM+A
Sbjct: 61  SLQSPVQTICSLVVESYFRQPHLRFSPFKLNLDMDADFLTHEQAISVVASLASEEGSMMA 120

Query: 121 LSFFYWAIGFSKFRHFMRLYIVCAMSLIGRSNQDRAHEVVESMVGVFAEIGKLKEAVDMI 180
           LSFFYWAIGF KFR+FMRLYIVC M L+G+  Q+RA EVVE M+GVFAEIGKLKEAVDMI
Sbjct: 121 LSFFYWAIGFPKFRYFMRLYIVCTMLLVGKCKQERADEVVECMIGVFAEIGKLKEAVDMI 180

Query: 181 FDMRNQGLVLTTRVMNRVIMVAAEMGMFDYAGYVFDEMSARGVSPDSCTYKSIIVGYCRN 240
            DMRNQGLVLTTRVMNR+IMVAAEMG+ +YAG +FDEMSARG++P+SCTYKSIIVGYCR 
Sbjct: 181 IDMRNQGLVLTTRVMNRIIMVAAEMGLLEYAGNMFDEMSARGMAPNSCTYKSIIVGYCRY 240

Query: 241 RNVLEVDRWISEMMERGFVVDNATLTLIINAFCEKGLVNRALGLFHKVNKMGLSPNLINY 300
            NVL+VDRW++EMMERGFVVDNATLTLIINAFC+KG V+RA  LFHKV KMGLSPNLINY
Sbjct: 241 GNVLDVDRWLNEMMERGFVVDNATLTLIINAFCKKGFVSRAFWLFHKVKKMGLSPNLINY 300

Query: 301 SSMISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTERAFRLFLKLVR 360
           SSMISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWT+RAFRLFLKLVR
Sbjct: 301 SSMISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTDRAFRLFLKLVR 360

Query: 361 SDNYKPNVHTYTAMISGYCKEEKLNRAEMLFERMKEQGIIPNTNTYTTLIDGHSKAGNFS 420
           SD YKPNV+TYTAMISGYCKEEKLNRAEMLFERMKEQG++PNTNTYTTLIDGH KAGNFS
Sbjct: 361 SDIYKPNVYTYTAMISGYCKEEKLNRAEMLFERMKEQGMVPNTNTYTTLIDGHCKAGNFS 420

Query: 421 RAYELMGLMCKEGSFPNIWTYNAVVDGLCKKGRAEEAFKLLNKGVRNNIEANSVTYTILI 480
           RAYELM +MC EG FPNI TYNA+VDGLCKKGR EEAFKLLNKG RN +EA++VTY ILI
Sbjct: 421 RAYELMEVMCNEGFFPNICTYNAIVDGLCKKGRVEEAFKLLNKGCRNRVEADAVTYNILI 480

Query: 481 SEQCKRVDLNRALMFLNKMFKVGFQPDIHLYTTLIAAFCRQKLMKDSEKLFDEVVKRGLV 540
           SEQCK  DLNRALMFL KM KVGFQPD+HLYTTLI+AFCRQK+M DSEKLFDEVVK G V
Sbjct: 481 SEQCKHADLNRALMFLTKMLKVGFQPDVHLYTTLISAFCRQKMMNDSEKLFDEVVKLGFV 540

Query: 541 PAKETYTSMICGYCRERKINLAVKFFLRMSGHGCVPDSISYGALISGLCKESRLDKAREL 600
           P KETYTSMICGYCRERKI+LAVKFF RM+ HGC PDSISYGALISGLCKESRLD+AR+L
Sbjct: 541 PTKETYTSMICGYCRERKIDLAVKFFQRMNVHGCAPDSISYGALISGLCKESRLDEARQL 600

Query: 601 YDAMIDKGLSPCEVTRVTLAYEYCKTEDFASAMVILERLEKKLWIRTVHTLIRKLCCEKK 660
           YD MID GL+PCEVTRVTLAYEYCKTE+FASAMVILERL+KKLWIRTVHTLIRKLC EKK
Sbjct: 601 YDVMIDNGLTPCEVTRVTLAYEYCKTEEFASAMVILERLDKKLWIRTVHTLIRKLCSEKK 660

Query: 661 VGMAALFFHKLLDKEANVDRVTLAAFMTACSESNKYSLVSDLSERISKGIG 702
           VGMAALFFHKLLDKE NVDRV+LAAFMTAC ESNKY+LVSDL+ERISKGIG
Sbjct: 661 VGMAALFFHKLLDKEVNVDRVSLAAFMTACCESNKYALVSDLTERISKGIG 711

[Close]

BLAST of Sed0017437 vs. ExPASy TrEMBL
Match: A0A5A7TNN8 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G00240 PE=4 SV=1)

HSP 1 Score: 1179.1 bits (3049), Expect = 0.0e+00
Identity = 592/703 (84.21%), Postives = 635/703 (90.33%), Query Frame = 0


Query: 4   MQFSTSLRILNLHGFPFKLSSFR--SSVSASAACFS----DLIFSPHHDSSTSSSQSPVQ 63
           MQF  S RIL  HGF  KL S +  SSVSAS A FS    D I SPHHD S+SS QSPVQ
Sbjct: 1   MQFLASHRILRTHGFLQKLCSLQHGSSVSASIAFFSSTHFDSISSPHHDFSSSSLQSPVQ 60

Query: 64  KICSLVLDSYFRQPHLRFSPSKLNLSMDADSVTHEQAISVVASLAAQEGSMVALSFFYWA 123
           K CSLVL++Y RQPHLRFSPSKLNL MDADS+THEQAIS VASLA++EGSMVALSFFYWA
Sbjct: 61  KTCSLVLEAYLRQPHLRFSPSKLNLDMDADSLTHEQAISAVASLASEEGSMVALSFFYWA 120

Query: 124 IGFSKFRHFMRLYIVCAMSLIGRSNQDRAHEVVESMVGVFAEIGKLKEAVDMIFDMRNQG 183
           IGF KFR+FMRLYIVC MSLIG+ N +RAHEVVE MVGVFAEIGKLKEAVDMI DMRNQG
Sbjct: 121 IGFPKFRYFMRLYIVCTMSLIGKCNLERAHEVVECMVGVFAEIGKLKEAVDMILDMRNQG 180

Query: 184 LVLTTRVMNRVIMVAAEMGMFDYAGYVFDEMSARGVSPDSCTYKSIIVGYCRNRNVLEVD 243
           LVLTTRVMNR+I+VAA MG+ +YAG VFDEMSARGV PDSCTYKSIIVGYCRN +VLE D
Sbjct: 181 LVLTTRVMNRIILVAAGMGLVEYAGNVFDEMSARGVYPDSCTYKSIIVGYCRNGDVLEAD 240

Query: 244 RWISEMMERGFVVDNATLTLIINAFCEKGLVNRALGLFHKVNKMGLSPNLINYSSMISGL 303
           RWI EMMERGFVVDNATLTLII AFCEK LVNRA+  FHKV KMGLSPNLINYSSMISGL
Sbjct: 241 RWICEMMERGFVVDNATLTLIIKAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGL 300

Query: 304 CKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTERAFRLFLKLVRSDNYKPN 363
           CKRGSVKQAFELLEEMV+NGWKPNVYTHTSLI GLCKKGWTERAFRLFLKLVRSDNYKPN
Sbjct: 301 CKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLVRSDNYKPN 360

Query: 364 VHTYTAMISGYCKEEKLNRAEMLFERMKEQGIIPNTNTYTTLIDGHSKAGNFSRAYELMG 423
           VHTYTAMISGYCKE+KL+RAEMLFERMKEQG++PNTNTYTTLIDGH KAGNFS+AYELM 
Sbjct: 361 VHTYTAMISGYCKEDKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELME 420

Query: 424 LMCKEGSFPNIWTYNAVVDGLCKKGRAEEAFKLLNKGVRNNIEANSVTYTILISEQCKRV 483
           LM  EG FPNI TYNA+VDGLCK+GRAEEAF+LL+KG +N IEA+ VTYTILISEQCKR 
Sbjct: 421 LMSNEGFFPNICTYNAIVDGLCKRGRAEEAFELLSKGFQNQIEADGVTYTILISEQCKRA 480

Query: 484 DLNRALMFLNKMFKVGFQPDIHLYTTLIAAFCRQKLMKDSEKLFDEVVKRGLVPAKETYT 543
           D+N AL+FLNKMFKVGFQPDIHLYTTLIAAFCRQ++MKDSEKLFDEVVK GL P KETYT
Sbjct: 481 DMNHALVFLNKMFKVGFQPDIHLYTTLIAAFCRQRMMKDSEKLFDEVVKLGLAPTKETYT 540

Query: 544 SMICGYCRERKINLAVKFFLRMSGHGCVPDSISYGALISGLCKESRLDKARELYDAMIDK 603
           SMICGYCRE+ I+LAVKFF +MS  GC PDSISYGALISGLCKESRLD+AR+LYD MIDK
Sbjct: 541 SMICGYCREKNISLAVKFFQKMSDQGCAPDSISYGALISGLCKESRLDEARQLYDTMIDK 600

Query: 604 GLSPCEVTRVTLAYEYCKTEDFASAMVILERLEKKLWIRTVHTLIRKLCCEKKVGMAALF 663
           GLSPCEVTRV+LAYEYCKTED ASAMVILERL KKLWIRTVHTLIRKLCCEKKV +AALF
Sbjct: 601 GLSPCEVTRVSLAYEYCKTEDCASAMVILERLNKKLWIRTVHTLIRKLCCEKKVALAALF 660

Query: 664 FHKLLDKEANVDRVTLAAFMTACSESNKYSLVSDLSERISKGI 701
           FHKLLDKE NVDRVTLAAF+TAC+ESNKY+LVSDLSERISKG+
Sbjct: 661 FHKLLDKEVNVDRVTLAAFITACTESNKYALVSDLSERISKGM 703

[Close]

BLAST of Sed0017437 vs. ExPASy TrEMBL
Match: A0A6J1K602 (pentatricopeptide repeat-containing protein At4g19890 OS=Cucurbita maxima OX=3661 GN=LOC111490387 PE=4 SV=1)

HSP 1 Score: 1177.2 bits (3044), Expect = 0.0e+00
Identity = 591/706 (83.71%), Postives = 633/706 (89.66%), Query Frame = 0


Query: 1   MPLMQFSTSLRILNLHGFPFKLS-SFRSSVSASAACFS----DLIFSPHHDSSTSSSQSP 60
           MP MQF  SLRIL LHGF  K S   R SVSASA  FS    D I SPH DSS+SS QSP
Sbjct: 1   MPSMQFLASLRILRLHGFLHKFSFPQRLSVSASAGFFSSSHFDSISSPHRDSSSSSLQSP 60

Query: 61  VQKICSLVLDSYFRQPHLRFSPSKLNLSMDADSVTHEQAISVVASLAAQEGSMVALSFFY 120
           VQ ICSLV++SYFRQPHLRFSP KLNL +DAD +THEQAISVVASLA++EGSM+ALSFFY
Sbjct: 61  VQTICSLVIESYFRQPHLRFSPFKLNLDVDADFLTHEQAISVVASLASEEGSMMALSFFY 120

Query: 121 WAIGFSKFRHFMRLYIVCAMSLIGRSNQDRAHEVVESMVGVFAEIGKLKEAVDMIFDMRN 180
           WAI F KFR+FMRLYIVC M L+ +  Q+RA EVVE M+GVFAEIGKLKEAVDMI DMRN
Sbjct: 121 WAIRFPKFRYFMRLYIVCTMLLVEKCKQERADEVVECMIGVFAEIGKLKEAVDMIIDMRN 180

Query: 181 QGLVLTTRVMNRVIMVAAEMGMFDYAGYVFDEMSARGVSPDSCTYKSIIVGYCRNRNVLE 240
           QGLVLTTRVMNR+IMVAAEMG+ +YAG +FDEMSARG++P+SCTYKSIIVGYCR  NVL+
Sbjct: 181 QGLVLTTRVMNRIIMVAAEMGLLEYAGNMFDEMSARGMAPNSCTYKSIIVGYCRYGNVLD 240

Query: 241 VDRWISEMMERGFVVDNATLTLIINAFCEKGLVNRALGLFHKVNKMGLSPNLINYSSMIS 300
           VDRWI+EMMERGFVVDNATLTLIINAFC+KG V+RA  LFHKV KMGLSPNLINYSSMIS
Sbjct: 241 VDRWINEMMERGFVVDNATLTLIINAFCKKGFVSRAFWLFHKVKKMGLSPNLINYSSMIS 300

Query: 301 GLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTERAFRLFLKLVRSDNYK 360
           GLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWT+RAFRLFLKLVRSD YK
Sbjct: 301 GLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTDRAFRLFLKLVRSDIYK 360

Query: 361 PNVHTYTAMISGYCKEEKLNRAEMLFERMKEQGIIPNTNTYTTLIDGHSKAGNFSRAYEL 420
           PNV+TYTAMISGYCKEEKLNRAEMLFERMKEQG++PNTNTYTTLIDGH KAGNFSRAYEL
Sbjct: 361 PNVYTYTAMISGYCKEEKLNRAEMLFERMKEQGMVPNTNTYTTLIDGHCKAGNFSRAYEL 420

Query: 421 MGLMCKEGSFPNIWTYNAVVDGLCKKGRAEEAFKLLNKGVRNNIEANSVTYTILISEQCK 480
           M  MC EG FPNI TYNA+VDGLCKKGR EEAFKLLNKG RN +EA++VTY ILISEQCK
Sbjct: 421 MEFMCNEGFFPNICTYNAMVDGLCKKGRVEEAFKLLNKGCRNRVEADAVTYNILISEQCK 480

Query: 481 RVDLNRALMFLNKMFKVGFQPDIHLYTTLIAAFCRQKLMKDSEKLFDEVVKRGLVPAKET 540
             DLNRALMFL KM KVGFQPD+HLYTTLI+AFCRQK+M DSEKLFDEVVK G VP KET
Sbjct: 481 HADLNRALMFLTKMLKVGFQPDVHLYTTLISAFCRQKMMNDSEKLFDEVVKLGFVPTKET 540

Query: 541 YTSMICGYCRERKINLAVKFFLRMSGHGCVPDSISYGALISGLCKESRLDKARELYDAMI 600
           YTSMICGYCRERKI LAVKFF RMS HGC PDSISYGALISGLCKESRLD+AR LYD MI
Sbjct: 541 YTSMICGYCRERKIGLAVKFFQRMSDHGCAPDSISYGALISGLCKESRLDEARRLYDVMI 600

Query: 601 DKGLSPCEVTRVTLAYEYCKTEDFASAMVILERLEKKLWIRTVHTLIRKLCCEKKVGMAA 660
           D GL+PCEVTRVTLAYEYCKTE+FASAMVILERL+KKLWI TVHTLIRKLC EKKVGMAA
Sbjct: 601 DNGLTPCEVTRVTLAYEYCKTEEFASAMVILERLDKKLWIHTVHTLIRKLCSEKKVGMAA 660

Query: 661 LFFHKLLDKEANVDRVTLAAFMTACSESNKYSLVSDLSERISKGIG 702
           LFFHKLLDKE NVDRV+LAAFMTAC ESNKY+LVSDL+ERISKGIG
Sbjct: 661 LFFHKLLDKEVNVDRVSLAAFMTACCESNKYALVSDLTERISKGIG 706

[Close]

BLAST of Sed0017437 vs. TAIR 10
Match: AT4G19890.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 885.9 bits (2288), Expect = 2.0e-257
Identity = 438/690 (63.48%), Postives = 539/690 (78.12%), Query Frame = 0


Query: 20  FKLSSFRSSVSASAACFSDLIFSPHHDS--------STSSSQSPVQKICSLVLDSYFRQP 79
           F L +F    S  +  F  LI S H  S        S+S SQ  V+ +CSLV  SY RQ 
Sbjct: 12  FLLRTFEIPNSLCSLFFFRLISSDHESSDLSLPSSPSSSPSQCLVKSVCSLVCTSYLRQN 71

Query: 80  HLRFSPSKLNLSMDADSVTHEQAISVVASLAAQEGSMVALSFFYWAIGFSKFRHFMRLYI 139
           H+  SP ++NL  DA+S+THEQAI+VVASLA++ GSMVAL FFYWA+GF KFRHFMRLY+
Sbjct: 72  HVVSSPHRVNLDFDANSLTHEQAITVVASLASESGSMVALCFFYWAVGFEKFRHFMRLYL 131

Query: 140 VCAMSLIGRSNQDRAHEVVESMVGVFAEIGKLKEAVDMIFDMRNQGLVLTTRVMNRVIMV 199
           V A SL+   N  +AHEV+  M+  F+EIG+L EAV M+ DM+NQGL  ++  MN V+ +
Sbjct: 132 VTADSLLANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEI 191

Query: 200 AAEMGMFDYAGYVFDEMSARGVSPDSCTYKSIIVGYCRNRNVLEVDRWISEMMERGFVVD 259
           A E+G+ +YA  VFDEMS RGV PDS +YK +++G  R+  + E DRW++ M++RGF+ D
Sbjct: 192 AVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPD 251

Query: 260 NATLTLIINAFCEKGLVNRALGLFHKVNKMGLSPNLINYSSMISGLCKRGSVKQAFELLE 319
           NAT TLI+ A CE GLVNRA+  F K+  +G  PNLIN++S+I GLCK+GS+KQAFE+LE
Sbjct: 252 NATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLE 311

Query: 320 EMVRNGWKPNVYTHTSLIDGLCKKGWTERAFRLFLKLVRSDNYKPNVHTYTAMISGYCKE 379
           EMVRNGWKPNVYTHT+LIDGLCK+GWTE+AFRLFLKLVRSD YKPNVHTYT+MI GYCKE
Sbjct: 312 EMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKE 371

Query: 380 EKLNRAEMLFERMKEQGIIPNTNTYTTLIDGHSKAGNFSRAYELMGLMCKEGSFPNIWTY 439
           +KLNRAEMLF RMKEQG+ PN NTYTTLI+GH KAG+F RAYELM LM  EG  PNI+TY
Sbjct: 372 DKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTY 431

Query: 440 NAVVDGLCKKGRAEEAFKLLNKGVRNNIEANSVTYTILISEQCKRVDLNRALMFLNKMFK 499
           NA +D LCKK RA EA++LLNK     +EA+ VTYTILI EQCK+ D+N+AL F  +M K
Sbjct: 432 NAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNK 491

Query: 500 VGFQPDIHLYTTLIAAFCRQKLMKDSEKLFDEVVKRGLVPAKETYTSMICGYCRERKINL 559
            GF+ D+ L   LIAAFCRQK MK+SE+LF  VV  GL+P KETYTSMI  YC+E  I+L
Sbjct: 492 TGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDL 551

Query: 560 AVKFFLRMSGHGCVPDSISYGALISGLCKESRLDKARELYDAMIDKGLSPCEVTRVTLAY 619
           A+K+F  M  HGCVPDS +YG+LISGLCK+S +D+A +LY+AMID+GLSP EVTRVTLAY
Sbjct: 552 ALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAY 611

Query: 620 EYCKTEDFASAMVILERLEKKLWIRTVHTLIRKLCCEKKVGMAALFFHKLLDKEANVDRV 679
           EYCK  D A+AM++LE L+KKLWIRTV TL+RKLC EKKVG+AALFF KLL+K+++ DRV
Sbjct: 612 EYCKRNDSANAMILLEPLDKKLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRV 671

Query: 680 TLAAFMTACSESNKYSLVSDLSERISKGIG 702
           TLAAF TACSES K +LV+DL+ERIS+G+G
Sbjct: 672 TLAAFTTACSESGKNNLVTDLTERISRGVG 701

[Close]

BLAST of Sed0017437 vs. TAIR 10
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 261.5 bits (667), Expect = 1.9e-69
Identity = 140/428 (32.71%), Postives = 239/428 (55.84%), Query Frame = 0


Query: 200 YAGYVFDEMSARGVSPDSCTYKSIIVGYCRNRNVLEVDRWISEMMERGFVVDNATLTLII 259
           +A  VF EM    VSP+  TY  +I G+C   N+        +M  +G + +  T   +I
Sbjct: 188 FAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLI 247

Query: 260 NAFCEKGLVNRALGLFHKVNKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVRNGWK 319
           + +C+   ++    L   +   GL PNLI+Y+ +I+GLC+ G +K+   +L EM R G+ 
Sbjct: 248 DGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYS 307

Query: 320 PNVYTHTSLIDGLCKKGWTERAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKLNRAEM 379
            +  T+ +LI G CK+G   +A  +  +++R     P+V TYT++I   CK   +NRA  
Sbjct: 308 LDEVTYNTLIKGYCKEGNFHQALVMHAEMLR-HGLTPSVITYTSLIHSMCKAGNMNRAME 367

Query: 380 LFERMKEQGIIPNTNTYTTLIDGHSKAGNFSRAYELMGLMCKEGSFPNIWTYNAVVDGLC 439
             ++M+ +G+ PN  TYTTL+DG S+ G  + AY ++  M   G  P++ TYNA+++G C
Sbjct: 368 FLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHC 427

Query: 440 KKGRAEEAFKLLNKGVRNNIEANSVTYTILISEQCKRVDLNRALMFLNKMFKVGFQPDIH 499
             G+ E+A  +L       +  + V+Y+ ++S  C+  D++ AL    +M + G +PD  
Sbjct: 428 VTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTI 487

Query: 500 LYTTLIAAFCRQKLMKDSEKLFDEVVKRGLVPAKETYTSMICGYCRERKINLAVKFFLRM 559
            Y++LI  FC Q+  K++  L++E+++ GL P + TYT++I  YC E  +  A++    M
Sbjct: 488 TYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEM 547

Query: 560 SGHGCVPDSISYGALISGLCKESRLDKARELYDAMIDKGLSPCEVTRVTLAYEYCKTEDF 619
              G +PD ++Y  LI+GL K+SR  +A+ L   +  +   P +VT  TL  E C   +F
Sbjct: 548 VEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTL-IENCSNIEF 607

Query: 620 ASAMVILE 628
            S + +++
Sbjct: 608 KSVVSLIK 613

[Close]

BLAST of Sed0017437 vs. TAIR 10
Match: AT4G11690.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 258.5 bits (659), Expect = 1.6e-68
Identity = 144/451 (31.93%), Postives = 234/451 (51.88%), Query Frame = 0


Query: 151 ESMVGVFAEIGKLKEAVDMIFDMRNQGLVLTTRVMNRVIMVAAEMGMFDYAGYVFDEMSA 210
           E ++  + +   L  ++    +M + G V  +   N ++        F+     F+E  +
Sbjct: 98  EVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKS 157

Query: 211 RGVSPDSCTYKSIIVGYCRNRNVLEVDRWISEMMERGFVVDNATLTLIINAFCEKGLVNR 270
           + V  D  ++  +I G C    + +    + E+ E GF  +    T +I+  C+KG + +
Sbjct: 158 K-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEK 217

Query: 271 ALGLFHKVNKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLID 330
           A  LF ++ K+GL  N   Y+ +I+GL K G  KQ FE+ E+M  +G  PN+YT+  +++
Sbjct: 218 AKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMN 277

Query: 331 GLCKKGWTERAFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKLNRAEMLFERMKEQGII 390
            LCK G T+ AF++F ++ R      N+ TY  +I G C+E KLN A  + ++MK  GI 
Sbjct: 278 QLCKDGRTKDAFQVFDEM-RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 337

Query: 391 PNTNTYTTLIDGHSKAGNFSRAYELMGLMCKEGSFPNIWTYNAVVDGLCKKGRAEEAFKL 450
           PN  TY TLIDG    G   +A  L   +   G  P++ TYN +V G C+KG    A K+
Sbjct: 338 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 397

Query: 451 LNKGVRNNIEANSVTYTILISEQCKRVDLNRALMFLNKMFKVGFQPDIHLYTTLIAAFCR 510
           + +     I+ + VTYTILI    +  ++ +A+     M ++G  PD+H Y+ LI  FC 
Sbjct: 398 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCI 457

Query: 511 QKLMKDSEKLFDEVVKRGLVPAKETYTSMICGYCRERKINLAVKFFLRMSGHGCVPDSIS 570
           +  M ++ +LF  +V++   P +  Y +MI GYC+E     A+K    M      P+  S
Sbjct: 458 KGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVAS 517

Query: 571 YGALISGLCKESRLDKARELYDAMIDKGLSP 602
           Y  +I  LCKE +  +A  L + MID G+ P
Sbjct: 518 YRYMIEVLCKERKSKEAERLVEKMIDSGIDP 546

[Close]

BLAST of Sed0017437 vs. TAIR 10
Match: AT1G74580.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 256.9 bits (655), Expect = 4.7e-68
Identity = 154/477 (32.29%), Postives = 244/477 (51.15%), Query Frame = 0


Query: 161 GKLKEAVDMIFDMRNQGLVLTTRVMNRVIMVAAEMGMFDYAGYVFDEMSARGVSPDSCTY 220
           G+L  AV M+  +  QG        N +I    +   F  A     +M   G+ PDS TY
Sbjct: 265 GELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTY 324

Query: 221 KSIIVGYCRNRNVLEVDRWISEMMERGFVVDNATLTLIINAFCEKGLVNRALGLFHKVNK 280
            ++I GYC+   V   +R + + +  GFV D  T   +I+  C +G  NRAL LF++   
Sbjct: 325 NTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALG 384

Query: 281 MGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTER 340
            G+ PN+I Y+++I GL  +G + +A +L  EM   G  P V T   L++GLCK G    
Sbjct: 385 KGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSD 444

Query: 341 AFRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKLNRAEMLFERMKEQGIIPNTNTYTTLI 400
           A  L +K++ S  Y P++ T+  +I GY  + K+  A  + + M + G+ P+  TY +L+
Sbjct: 445 ADGL-VKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLL 504

Query: 401 DGHSKAGNFSRAYELMGLMCKEGSFPNIWTYNAVVDGLCKKGRAEEAFKLLNKGVRNNIE 460
           +G  K   F    E    M ++G  PN++T+N +++ LC+  + +EA  LL +    ++ 
Sbjct: 505 NGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVN 564

Query: 461 ANSVTYTILISEQCKRVDLNRALMFLNKM---FKVGFQPDIHLYTTLIAAFCRQKLMKDS 520
            ++VT+  LI   CK  DL+ A     KM   +KV        Y  +I AF  +  +  +
Sbjct: 565 PDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKV--SSSTPTYNIIIHAFTEKLNVTMA 624

Query: 521 EKLFDEVVKRGLVPAKETYTSMICGYCRERKINLAVKFFLRMSGHGCVPDSISYGALISG 580
           EKLF E+V R L P   TY  M+ G+C+   +NL  KF L M  +G +P   + G +I+ 
Sbjct: 625 EKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINC 684

Query: 581 LCKESRLDKARELYDAMIDKGLSPCEVTRVTLAYEYCKTE--DFASAMVILERLEKK 633
           LC E R+ +A  +   M+ KGL P  V  +      C  +  + A+  ++LE L KK
Sbjct: 685 LCVEDRVYEAAGIIHRMVQKGLVPEAVNTI------CDVDKKEVAAPKLVLEDLLKK 732

[Close]

BLAST of Sed0017437 vs. TAIR 10
Match: AT1G05670.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 256.5 bits (654), Expect = 6.1e-68
Identity = 144/471 (30.57%), Postives = 238/471 (50.53%), Query Frame = 0


Query: 162 KLKEAVDMIFDMRNQGLVLTTRVMNRVIMVAAEMGMFDYAGYVFDEMSARGVSPDSCTYK 221
           K   A+ +  +    G+       N VI    ++G    A ++   M  +G +PD  +Y 
Sbjct: 226 KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYS 285

Query: 222 SIIVGYCRNRNVLEVDRWISEMMERGFVVDNATLTLIINAFCEKGLVNRALGLFHKVNKM 281
           +++ GYCR   + +V + I  M  +G   ++     II   C    +  A   F ++ + 
Sbjct: 286 TVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345

Query: 282 GLSPNLINYSSMISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTERA 341
           G+ P+ + Y+++I G CKRG ++ A +   EM      P+V T+T++I G C+ G    A
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405

Query: 342 FRLFLKLVRSDNYKPNVHTYTAMISGYCKEEKLNRAEMLFERMKEQGIIPNTNTYTTLID 401
            +LF ++      +P+  T+T +I+GYCK   +  A  +   M + G  PN  TYTTLID
Sbjct: 406 GKLFHEMF-CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID 465

Query: 402 GHSKAGNFSRAYELMGLMCKEGSFPNIWTYNAVVDGLCKKGRAEEAFKLLNKGVRNNIEA 461
           G  K G+   A EL+  M K G  PNI+TYN++V+GLCK G  EEA KL+ +     + A
Sbjct: 466 GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA 525

Query: 462 NSVTYTILISEQCKRVDLNRALMFLNKMFKVGFQPDIHLYTTLIAAFCRQKLMKDSEKLF 521
           ++VTYT L+   CK  ++++A   L +M   G QP I  +  L+  FC   +++D EKL 
Sbjct: 526 DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 585

Query: 522 DEVVKRGLVPAKETYTSMICGYCRERKINLAVKFFLRMSGHGCVPDSISYGALISGLCKE 581
           + ++ +G+ P   T+ S++  YC    +  A   +  M   G  PD  +Y  L+ G CK 
Sbjct: 586 NWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKA 645

Query: 582 SRLDKARELYDAMIDKGLSPCEVTRVTLAYEYCKTEDFASAMVILERLEKK 633
             + +A  L+  M  KG S    T   L   + K + F  A  + +++ ++
Sbjct: 646 RNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 695

The following BLAST results are available for this feature:

BLAST of Sed0017437 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145475.3	0.0e+00	83.90	pentatricopeptide repeat-containing protein At4g19890 [Cucumis sativus] >KGN6687...	[more]
XP_038895548.1	0.0e+00	85.11	pentatricopeptide repeat-containing protein At4g19890 isoform X3 [Benincasa hisp...	[more]
XP_008459042.1	0.0e+00	84.38	PREDICTED: pentatricopeptide repeat-containing protein At4g19890 [Cucumis melo]	[more]
XP_022954541.1	0.0e+00	83.26	pentatricopeptide repeat-containing protein At4g19890 [Cucurbita moschata]	[more]
KAA0043201.1	0.0e+00	84.21	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK12267...	[more]

BLAST of Sed0017437 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0C8Q3	2.9e-256	63.48	Pentatricopeptide repeat-containing protein At4g19890 OS=Arabidopsis thaliana OX...	[more]
Q9FIX3	2.7e-68	32.71	Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX...	[more]
Q9T0D6	2.3e-67	31.93	Pentatricopeptide repeat-containing protein At4g11690 OS=Arabidopsis thaliana OX...	[more]
Q9CA58	6.5e-67	32.29	Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis th...	[more]
Q0WVK7	8.6e-67	30.57	Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop...	[more]

BLAST of Sed0017437 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LYL9	0.0e+00	83.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G701980 PE=4 SV=1	[more]
A0A1S3CAH0	0.0e+00	84.38	pentatricopeptide repeat-containing protein At4g19890 OS=Cucumis melo OX=3656 GN...	[more]
A0A6J1GR66	0.0e+00	83.26	pentatricopeptide repeat-containing protein At4g19890 OS=Cucurbita moschata OX=3...	[more]
A0A5A7TNN8	0.0e+00	84.21	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1K602	0.0e+00	83.71	pentatricopeptide repeat-containing protein At4g19890 OS=Cucurbita maxima OX=366...	[more]

BLAST of Sed0017437 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G19890.1	2.0e-257	63.48	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT5G39710.1	1.9e-69	32.71	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G11690.1	1.6e-68	31.93	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT1G74580.1	4.7e-68	32.29	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G05670.1	6.1e-68	30.57	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 472..581 e-value: 2.8E-30 score: 107.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 280..348 e-value: 5.4E-21 score: 77.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 349..471 e-value: 2.7E-35 score: 124.3 coord: 583..699 e-value: 5.1E-14 score: 54.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 133..279 e-value: 2.6E-27 score: 98.0
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 216..263 e-value: 4.1E-8 score: 33.3 coord: 426..475 e-value: 2.9E-14 score: 53.0 coord: 535..580 e-value: 1.5E-12 score: 47.5 coord: 285..334 e-value: 1.5E-17 score: 63.5 coord: 356..404 e-value: 4.9E-18 score: 65.1
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 152..178 e-value: 0.46 score: 10.8
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 493..523 e-value: 2.2E-6 score: 27.3
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 323..358 e-value: 3.5E-6 score: 24.8 coord: 535..568 e-value: 1.2E-9 score: 35.7 coord: 430..461 e-value: 1.2E-5 score: 23.2 coord: 359..393 e-value: 1.3E-10 score: 38.8 coord: 395..427 e-value: 5.2E-8 score: 30.6 coord: 254..286 e-value: 0.0014 score: 16.7 coord: 188..217 e-value: 0.0021 score: 16.1 coord: 569..601 e-value: 1.8E-8 score: 32.1 coord: 500..531 e-value: 4.2E-6 score: 24.6 coord: 218..251 e-value: 9.1E-7 score: 26.7 coord: 290..322 e-value: 4.9E-10 score: 36.9
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 357..391 score: 13.877064
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 321..356 score: 10.742131
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 251..285 score: 10.413293
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 216..250 score: 10.336563
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 286..320 score: 13.339959
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 567..601 score: 13.339959
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 392..426 score: 11.016164
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 462..496 score: 9.788499
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 497..531 score: 11.91499
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 532..566 score: 11.41077
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 427..461 score: 11.114816
None	No IPR available	PANTHER	PTHR47942	TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 43..686
None	No IPR available	PANTHER	PTHR47942:SF30	OS11G0607100 PROTEIN	coord: 43..686
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 333..559

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0017437.1	Sed0017437.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0005515	protein binding