Sed0016985 (gene) Chayote v1

Overview


Name	Sed0016985
Type	gene
Organism	Sechium edule (Chayote v1)
Description	RING-type domain-containing protein
Location	LG11: 2944621 .. 2950322 (+)
RNA-Seq Expression	Sed0016985
Synteny	Sed0016985

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACCACATGTCGGAAAGGCCCGTGGAATTGCAGAGCTCTGCGGCAATGGAGATGGAGACGAGCAGTTCTTGTCACGAGGATGCGAACCCTTGTCCGATCTGTCTCGGCGCCATAACCCAACCTTCCTACCTCGACAAATGCTTCCGTAAGACACTTTTTCTCTCTCTCAATCGGTTCATTCTTCTTCGTTTTCTTGAATTTTCCGGTCATGAAACCGATGATATTTGGAAATATTGTACGAATTAGGGTTTTTGTTTTCCGTAATCTTAGAGTGGCTCACTTGGAATGATCCATCGAAAGAATCACTCTGTTGTCGATTTAGGGGATTTCAGGTTCTAGGGCTTAGCTCAATTATTTAGGTTTCTGCCACTGTTCTGTATTCGATGGATGAAATTGTTTGATCATTGCAGTATGTTGAAATATAGAATCAATCAACTGGTTTCATTTGGGATAAACATAAATATTGTAATCTACCTTTTTTTTTTTTTTTTAAATAAGGGTAACCATGCCTAAGTCTCGAACCCGAGACATCGAAGAAATAATGTCACAGGTGAGTCTCGAACTCGAGATCTTGAGTGGAGTATACCCTTAATGCCTAAGTCTTCAACTACTACCCCACCCCTTGGAGACTAATTCCCGAGCTTTTAGTAAATAGAAAGTTCTCTTAGAAATTTTCAGTTTGGTTTGATTCTTAATTCTTTTAGCCTTTTAAGCTTGAGGAAAACTAATTCTTACATCTTATATCATGGCATCTTCTTTTTCTTCTTTAAGGAAAACAGAAACAGCACCCACATTGCTTTCTTTGATATATTGAATGCACTCATGGATAGATTCTGTTACTGTCTTTGAGATGAATATAAGTATAACCATTTATTTTGTTTTTAATTTACTCTCTTTTAACGCCAACAAGAGTAATATTTCAATTGGTATAAATGTGTGCCCATTACCGAGGTCATGAGTTTGAGTCCTCCTATTCCCATTTTTTGTTTAACTAAAAAAAAGGATATTTTATTTATACTTGAATAATAATTTTAATTATGTTGCTCGAAAAAACCATCATGAGTCAATAAGAGACTTTAAAATTGTAAAGTGCTTAGAGAGATCAGTTGTTACATTAGATTAGTTGAGGATGAGGTGCATGTAAGCTTGCTCAAACACTCACACTCACGAATAAAAAGAAATTGTGTTGCTCAAAAATTGGGTTATTGAAGTGAAAGAGTAAATATCACATATCTTTAGTTTTTACTTTGGTATCATGTTAATCGTATGTAATTTCAATAGTTTAAACCTTACAGTTACAGTTTGGGTGAATTTGATCATTTAATTAATTCTATTGATGAGTTATATTGAGTAGTTAAAAATTGAGAGTTGTGCCAAAAACTCGTTAGTTTTTTTATAGAGGAGTTATAGTCAAAACTTTGTTTGGATGTAAATTTAAAAATGAGTAGTTATTTTTAGTAGTTAAAAAAGAAATGATTAAAAATGAGTTGTTAAAAATAAGCTAGCTATTTTGATTGATTTGAAAAGAATAATTAAAAATGAGTGGTTAGAAATGATTGAGTAGTTATAAATGAATGATTAAAAATGAATGGTTAGAAATGAGAGTTATTTTCAAAAGTAAAATTGAGGAGGAGTTGGTAAAAACTCGTTTGGATGTAGGTTTTAGAGGAGAAGTTACTAAATCCTAAACCTAACTCCTAGCTAAAAACGTCAAACAAACAGCCCCTAAAGATTTTATTCGTTCATTCATGTTGACTACAATATAGTATTTAGAAAAAAAGGAAAGTCAACAAACTTTGTTGAGAAGCTTGAATTCTATTTCTGTCTTGCAGATAAATTTTGTTACAATTGCATTGTACAATGGACCAAGGTGGTTTCTGGGAAGCGCACTTGTACGCTTTCATCCATCAAGTGTCCTTTATGCAAGGTTTTACTTTCCTTCCCCTGTTAACTTGTTTTCCTTAACCGTCCATACTTTTTGTATTGGATTTTTTATATTTTATATTTAATCATCAGACAGAAAGTTCTTCTATAATACATGGATTAGATGGACATTGTTTTCAAAGGCATTATGTTAATCAAAATTTTCAGGATAGGTATCTTCTTGTCAATACTTCCCCTACGTTTTCTATTCCTATTTTCTCTTCCTTGATTGACTATGCTTTATAATTGATGTTATTTGCAGCTTTGTCTTATCGAAAGCTCACAAGTATAGATTACAGTGCTATTATACTGAACCAGGTTAGTTTTCTGTTTATCATTGGAATCATTATGTGGATGTTTGATGGTCCAACATTTATATCATGGTGATTTGGATTTATTAGCTCCGTTTGATAACCATATGGTTTTAAGCTTTCGGTTTATGAGAATTATGCTTATAATACACTACTTCACCTTTGAGATTATTTTGTCATCTACATTCAATATTTTCAAAAATCAAGACAAGCTAAAAATACAGTATTTAAAATAATTTGTTGGGGATTTTGCATGTATAATAAAAAAAGGCAAAGTATTTCCATCTACAGTACAAAATCACAACTAATTCATTTGTAACAAAAAATTCAAATTGAATTTTATCACTGATTGAGTTTTATTAGTGATAGAATTCAATCAATGATAGACATATTCTATCACTGTTTGAGTTTTCTATCAGTGATAGATCACTGGTTGAATTTTATCATTGATAGAAATGAATGTGTTGTAGATGAATTATTTCAGAAATTGTGCTGCAAATATAATACGAGTGGGAGAATGTGATGTTGATGGTAAATTCTCTACTTTGTTTGTTTTAATTAATTTGAATAAGAAATTATATGTATCTTTGAAAAATGTGAAAACTATTTTAAAGAATTTAAGAAGAAATATGCATAAATTTTAGGAACAGAAAGCTAAAAACAAAATTGTTATTAAATGAGACTTAACTTTCCGTAGTTATTTACATGTAGGTTTCTTGGATGACGTATTCAATGTACAAAGACATTGGAAGTTACGAAAGTATCTCCAGGAAAACCAATGGCTTGCAGTTTGGTTGAAAAGGGAACTTCAAGCTTTGATTCAGGTTCGTTTCACATTTATACTTCTACAAGATACTGCTTCCTTTGGCCTCTTTTTTCTCTAGGATAATGTTTAATATCCACCTAGTAGTTAATGAAATTTTTAATTCCAAAATGTCCTCTGTGTCGAATAATGAAAATCGGACACTGACACGGAAAAAGGAAGTAGAGGCGTGGGGTTTCTCTCATTTATGGCATAGTGGCCTCTACAGAGGGCTAATCTGTTGATTGAGGTTTTTTGAAAAATCTGTTGAAAAGAGTAAAACTCCTCTACACATGAATGTGAAGAGGAACTCTGCATTTTACTTATGTGGCACATTGGTGCCACAAAAAATTATACGCATTTTGATATCTTCATTTATCAAATAATTGTTTGTGGCATTCAATCATGCCACATAAGCAAAAAGTAGAGCTCTCTTACACACTCATATGGGTTTTGTGATTATGGAAAGTAGGCAAGTTGAGTTACAGATATGCCTGTTGTTCCCTTTACTATAACTGTGGGAATAGTGCATTCATCACTCACACCATTTAGTAGAGAAGGCATTACTGTAGACAAAACAGGATAGCAGAAATAGATGTATGATGTATGATACCGTTTCTATGGCGTAGTTTCTTGATTTCTCCATTGTATTTATATGCAGTACATAGATCCTTGAGCATGATGACTGATAATGTCAACTACCATTTTACAGGAAGAGGATGTTGACATAATTATGCACCACCTACTTGGTTTAATTAATCCATTTTTTAGTAGGTAATAACCATCACTTACTGCGTTCTAAACTGCTATCAAATACAAAAAGGTTAATTTACAAATTCCATTCCTTTGATTTGGATAAAGTTGAAATTTAGACCTATGGTTTTACAAGTTAGAATTCATCTCTATTGCTTGATAAAAACCCTTCTAAATAGTTCTCAGGTACTAGAAACTATTTAGAATGATTGTACCGTACACTGAGGGGGCTATATTTATAAGGACGAAATTCTAACCAGTGTTTTCAAAGTGTAAGGCGCAATGCAAGGCGATACTCTCCTTGATCGGCTCAAAGCGAGAGGTTATAAAAAGGCGAGGCCCGAGTGAAAAGAGGCGCGTTTATAAATTGATAATAAAACATATGTGTATTCCCATAAAATTTCAAATTCATATGAAAAAATACTAAAAAGTAAAAAATAAAAGAATAATAAATCACAAAAATTATGTTATTATAAGTTATACCATAATATTAAATTATTATTTGTAAAAAGAATTGAAGTTAACTGAAAGTATAAAAAAACAAAGATTCTACGTCAAATAACTCGAATAAACAGACACATATATTTGAAATAGCAATTAAACAAATTTAGTATCCTTAATAAAAACTTCGCATAGTTGTTGGTCTTCTTCATAAACAAATTCTAGGTTCTTTTTGTGGATATTAAGTTAGGATATTGATAAATAAATAAAACTTTAACAAGGCGCACGCCTTGGCTTAAGGTGAAGGTGATGCAAGGCGTAAAATGGCGAGGAAAGGCGAGGGCCTGATCGAAGGAGCTCACCTTAGTTACGTTAGAGGCGCAATACCTGCCTATGTGCAAGGCGATGGCCATAGGCGAGGAAAGGCGATGGCCTTGAAAACACTGATTCTAACTTTAAATCATATAACTAAATTCTAACTTTCTTCAACCTATAGCTCAAATGGCATAAGTGTACACCTAGTGACCTTGAGGTCATAGGTTCAATTCCGCCACCCCAAATGTTGTATCCTAAAAAAAAACTTTCTTCAAACTAGGTGTATCATATAAAAAAGATTGGCCGCCCCGAGCCACTCGTGGCCCCATATATCGATCATCAAATGTCTTTTTTTTATGCTTTTCATTTTGGTTTGCCAGGTAGATGTTAGGGCCTGAACCACGGTTTTATTTATCAACCCAATACAACGAAGGAAACTTTTGAGAGCTTCCTCACTCTCCCACTCTCACTAGAGAGTTGCAGAAAATCAAAGCCAGAAAGATAACTCCTCTACGGACAACTCGCCCCTAGAGCCCGGTCACATACCTACAGGTCCCACAAACAAAACATGGTGACGGCATCAATCCTCAAACGACTCTCCCTTTTCTCACATGCTTATCTTCATTCACTTAGTGATTCGAGGCCTGTCAGTAAAATTTGTTGAACACATTCATTTTTACTCATTTCTCTGTCTCTTACCTATCTACATGAATGTAAATATGCATGATACCTGATTACACTCTGAAACCTGCTTCTTGTTCTCTCTGTTTTTTCTGAAGAAAGGAACCTAGGTATCAATCAGAAACTCCTCACTCGAAGCGGGAAAGGTTTAACAGCATGGTTTGTGATGCAGCAAAGCCATTCCTGTCGGCAAGAACAAACCGGTTCGTGCTCGAGTTGGAACTGTTTCTTGCTTCAGGTTTAAACATTGAAGCGTATGATTCGGTTTATTTGCAACGGTTGGGTTGGAGTGAGCCTGTAGTGCCCAGTGTGGCCATCAAAGAAGATGTTGGTCTCAAACCTGTAACTCCATACTTGTATATCTTTGACTATGACCCTGATGATGATGATGATTGAAAAAGTTGGAATTTGAATATAAATTTTCATTTGGAGTATTGGTAGATCTTTCATTGGAACATGTTAAGTTTGTTTGCTG

mRNA sequence

AAACCACATGTCGGAAAGGCCCGTGGAATTGCAGAGCTCTGCGGCAATGGAGATGGAGACGAGCAGTTCTTGTCACGAGGATGCGAACCCTTGTCCGATCTGTCTCGGCGCCATAACCCAACCTTCCTACCTCGACAAATGCTTCCATAAATTTTGTTACAATTGCATTGTACAATGGACCAAGGTGGTTTCTGGGAAGCGCACTTGTACGCTTTCATCCATCAAGTGTCCTTTATGCAAGACAGAAAGTTCTTCTATAATACATGGATTAGATGGACATTGTTTTCAAAGGCATTATGTTAATCAAAATTTTCAGGATAGCTTTGTCTTATCGAAAGCTCACAAGTATAGATTACAGTGCTATTATACTGAACCAGGTTTCTTGGATGACGTATTCAATGTACAAAGACATTGGAAGTTACGAAAGTATCTCCAGGAAAACCAATGGCTTGCAGTTTGGTTGAAAAGGGAACTTCAAGCTTTGATTCAGGAAGAGGATGTTGACATAATTATGCACCACCTACTTGGTTTAATTAATCCATTTTTTAGTAGAAAGGAACCTAGGTATCAATCAGAAACTCCTCACTCGAAGCGGGAAAGGTTTAACAGCATGGTTTGTGATGCAGCAAAGCCATTCCTGTCGGCAAGAACAAACCGGTTCGTGCTCGAGTTGGAACTGTTTCTTGCTTCAGGTTTAAACATTGAAGCGTATGATTCGGTTTATTTGCAACGGTTGGGTTGGAGTGAGCCTGTAGTGCCCAGTGTGGCCATCAAAGAAGATGTTGGTCTCAAACCTGTAACTCCATACTTGTATATCTTTGACTATGACCCTGATGATGATGATGATTGAAAAAGTTGGAATTTGAATATAAATTTTCATTTGGAGTATTGGTAGATCTTTCATTGGAACATGTTAAGTTTGTTTGCTG

Coding sequence (CDS)

ATGTCGGAAAGGCCCGTGGAATTGCAGAGCTCTGCGGCAATGGAGATGGAGACGAGCAGTTCTTGTCACGAGGATGCGAACCCTTGTCCGATCTGTCTCGGCGCCATAACCCAACCTTCCTACCTCGACAAATGCTTCCATAAATTTTGTTACAATTGCATTGTACAATGGACCAAGGTGGTTTCTGGGAAGCGCACTTGTACGCTTTCATCCATCAAGTGTCCTTTATGCAAGACAGAAAGTTCTTCTATAATACATGGATTAGATGGACATTGTTTTCAAAGGCATTATGTTAATCAAAATTTTCAGGATAGCTTTGTCTTATCGAAAGCTCACAAGTATAGATTACAGTGCTATTATACTGAACCAGGTTTCTTGGATGACGTATTCAATGTACAAAGACATTGGAAGTTACGAAAGTATCTCCAGGAAAACCAATGGCTTGCAGTTTGGTTGAAAAGGGAACTTCAAGCTTTGATTCAGGAAGAGGATGTTGACATAATTATGCACCACCTACTTGGTTTAATTAATCCATTTTTTAGTAGAAAGGAACCTAGGTATCAATCAGAAACTCCTCACTCGAAGCGGGAAAGGTTTAACAGCATGGTTTGTGATGCAGCAAAGCCATTCCTGTCGGCAAGAACAAACCGGTTCGTGCTCGAGTTGGAACTGTTTCTTGCTTCAGGTTTAAACATTGAAGCGTATGATTCGGTTTATTTGCAACGGTTGGGTTGGAGTGAGCCTGTAGTGCCCAGTGTGGCCATCAAAGAAGATGTTGGTCTCAAACCTGTAACTCCATACTTGTATATCTTTGACTATGACCCTGATGATGATGATGATTGA

Protein sequence

MSERPVELQSSAAMEMETSSSCHEDANPCPICLGAITQPSYLDKCFHKFCYNCIVQWTKVVSGKRTCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNQNFQDSFVLSKAHKYRLQCYYTEPGFLDDVFNVQRHWKLRKYLQENQWLAVWLKRELQALIQEEDVDIIMHHLLGLINPFFSRKEPRYQSETPHSKRERFNSMVCDAAKPFLSARTNRFVLELELFLASGLNIEAYDSVYLQRLGWSEPVVPSVAIKEDVGLKPVTPYLYIFDYDPDDDDD

Homology

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BLAST of Sed0016985 vs. NCBI nr
Match: XP_022150768.1 (uncharacterized protein LOC111018833 [Momordica charantia])

HSP 1 Score: 503.1 bits (1294), Expect = 1.6e-138
Identity = 237/279 (84.95%), Postives = 260/279 (93.19%), Query Frame = 0


Query: 1   MSERPVELQSSAAMEMETSSSCHEDANPCPICLGAITQPSYLDKCFHKFCYNCIVQWTKV 60
           MSE  +ELQS+A  EMET+SS ++D NPCPICLG+I +PSYLDKCFHKFCYNCIVQWTKV
Sbjct: 1   MSESAMELQSTAQKEMETASSSYDDTNPCPICLGSIIRPSYLDKCFHKFCYNCIVQWTKV 60

Query: 61  VSGKRTCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNQNFQDSFVLSKAHKYRLQCYY 120
           VSGKR+C LS IKCPLCKTESSSIIHGLDGHCFQRHYVNQ+FQDSF+LSKAHKYRLQCYY
Sbjct: 61  VSGKRSCILSPIKCPLCKTESSSIIHGLDGHCFQRHYVNQDFQDSFILSKAHKYRLQCYY 120

Query: 121 TEPGFLDDVFNVQRHWKLRKYLQENQWLAVWLKRELQALIQEEDVDIIMHHLLGLINPFF 180
           TEPGFL+D+FNVQR+WKLRKYLQ NQWL VWLKRELQALIQEEDVDIIMHHLLGLINPFF
Sbjct: 121 TEPGFLEDIFNVQRYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGLINPFF 180

Query: 181 SRKEPRYQSETPHSKRERFNSMVCDAAKPFLSARTNRFVLELELFLASGLNIEAYDSVYL 240
           SR E +YQ+E+P  K+E+F+S+V DAAKPFLSAR +RFV ELELFLASGLNIEAYDSVYL
Sbjct: 181 SRNEQKYQTESPEVKQEKFSSIVHDAAKPFLSARADRFVHELELFLASGLNIEAYDSVYL 240

Query: 241 QRLGWSEPVVPSVAIKEDVGLKPVTPYLYIFDYDPDDDD 280
           QRLGWSEPVVPSVAIKED+GLKPVTPYLYIFDYDPDD +
Sbjct: 241 QRLGWSEPVVPSVAIKEDLGLKPVTPYLYIFDYDPDDGE 279

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BLAST of Sed0016985 vs. NCBI nr
Match: XP_038889020.1 (uncharacterized protein LOC120078783 isoform X1 [Benincasa hispida])

HSP 1 Score: 500.7 bits (1288), Expect = 7.9e-138
Identity = 236/278 (84.89%), Postives = 254/278 (91.37%), Query Frame = 0


Query: 1   MSERPVELQSSAAMEMETSSSCHEDANPCPICLGAITQPSYLDKCFHKFCYNCIVQWTKV 60
           MSER +ELQS+A +E  TSSS  +D NPCPICLG I QPSYLDKCFHKFCYNCI+QWTKV
Sbjct: 1   MSERAMELQSTAPVETATSSSFSDDTNPCPICLGLIIQPSYLDKCFHKFCYNCILQWTKV 60

Query: 61  VSGKRTCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNQNFQDSFVLSKAHKYRLQCYY 120
           VSGK +C LSSIKCPLCKTESSSIIHGLDGHC QRHYVN++FQDSF+LSKAHKYRLQCYY
Sbjct: 61  VSGKHSCMLSSIKCPLCKTESSSIIHGLDGHCLQRHYVNRDFQDSFILSKAHKYRLQCYY 120

Query: 121 TEPGFLDDVFNVQRHWKLRKYLQENQWLAVWLKRELQALIQEEDVDIIMHHLLGLINPFF 180
           TEPGFLDD+FNVQR+WKLRKYLQ NQWL VWLKRELQALIQEED+DIIMHHLLG IN FF
Sbjct: 121 TEPGFLDDIFNVQRYWKLRKYLQANQWLEVWLKRELQALIQEEDIDIIMHHLLGFINSFF 180

Query: 181 SRKEPRYQSETPHSKRERFNSMVCDAAKPFLSARTNRFVLELELFLASGLNIEAYDSVYL 240
           SR EPRYQ+ETP  KRE FN MV DAAKPFLSAR +RFVLELELFLASGLNIEAYDSVYL
Sbjct: 181 SRNEPRYQTETPELKRETFNRMVLDAAKPFLSARADRFVLELELFLASGLNIEAYDSVYL 240

Query: 241 QRLGWSEPVVPSVAIKEDVGLKPVTPYLYIFDYDPDDD 279
           QRLGW+EPVVP +AIKED+GLKPVTPYLYIF+YDPDDD
Sbjct: 241 QRLGWNEPVVPIMAIKEDLGLKPVTPYLYIFEYDPDDD 278

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BLAST of Sed0016985 vs. NCBI nr
Match: XP_022946760.1 (uncharacterized protein LOC111450733 [Cucurbita moschata])

HSP 1 Score: 483.4 bits (1243), Expect = 1.3e-132
Identity = 228/274 (83.21%), Postives = 250/274 (91.24%), Query Frame = 0


Query: 6   VELQSSAAMEMETSSSCHEDANPCPICLGAITQPSYLDKCFHKFCYNCIVQWTKVVSGKR 65
           +ELQ +A +EMETSSS  +D NPCPICLG I QPSYLDKCFHKFCYNCIVQWTKVVSGK 
Sbjct: 1   MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKH 60

Query: 66  TCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNQNFQDSFVLSKAHKYRLQCYYTEPGF 125
           +CTLSSIKCPLCKTES SIIHGLDGHCFQRHYVNQ+FQDSF+LSKA KYRLQCYYTEPGF
Sbjct: 61  SCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDSFILSKAQKYRLQCYYTEPGF 120

Query: 126 LDDVFNVQRHWKLRKYLQENQWLAVWLKRELQALIQEEDVDIIMHHLLGLINPFFSRKEP 185
           LDD+F+VQ++WKLRKYLQ NQWL VWLKRELQALIQEEDVDIIMHHLLG I+ FFSR EP
Sbjct: 121 LDDIFSVQKYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEP 180

Query: 186 RYQSETPHSKRERFNSMVCDAAKPFLSARTNRFVLELELFLASGLNIEAYDSVYLQRLGW 245
           RYQ+ETP  KRERFNSM+ DAAKPFLS R +RFVLELELFLASGLNIEAYDSVYLQRLGW
Sbjct: 181 RYQTETPQLKRERFNSMILDAAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGW 240

Query: 246 SEPVVPSVAIKEDVGLKPVTPYLYIFDYDPDDDD 280
           ++PV PS+A+ ED+G +PVTPYL+IFDYDPDD D
Sbjct: 241 NKPVGPSMAV-EDLGHEPVTPYLFIFDYDPDDGD 273

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BLAST of Sed0016985 vs. NCBI nr
Match: XP_023545827.1 (uncharacterized protein LOC111805146 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 482.3 bits (1240), Expect = 2.9e-132
Identity = 227/274 (82.85%), Postives = 250/274 (91.24%), Query Frame = 0


Query: 6   VELQSSAAMEMETSSSCHEDANPCPICLGAITQPSYLDKCFHKFCYNCIVQWTKVVSGKR 65
           +ELQ +A +EMETSSS  +D NPCPICLG I QPSYLDKCFHKFCYNCIVQWTKVVSGK 
Sbjct: 1   MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKH 60

Query: 66  TCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNQNFQDSFVLSKAHKYRLQCYYTEPGF 125
           +CTLSSIKCPLCKTES SIIHGLDGHCFQRHYVNQ+FQDSF+LSKA KYRLQCYYTEPGF
Sbjct: 61  SCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDSFILSKAQKYRLQCYYTEPGF 120

Query: 126 LDDVFNVQRHWKLRKYLQENQWLAVWLKRELQALIQEEDVDIIMHHLLGLINPFFSRKEP 185
           LDD+F+VQ++WKLRKYLQ NQWL VWLKRELQALIQEEDVDIIMHHLLG I+ FFSR EP
Sbjct: 121 LDDIFSVQKYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEP 180

Query: 186 RYQSETPHSKRERFNSMVCDAAKPFLSARTNRFVLELELFLASGLNIEAYDSVYLQRLGW 245
           RYQ+ETP  KR+RFNSM+ DAAKPFLS R +RFVLELELFLASGLNIEAYDSVYLQRLGW
Sbjct: 181 RYQTETPQLKRDRFNSMILDAAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGW 240

Query: 246 SEPVVPSVAIKEDVGLKPVTPYLYIFDYDPDDDD 280
           ++PV PS+A+ ED+G +PVTPYL+IFDYDPDD D
Sbjct: 241 NKPVGPSMAV-EDLGHEPVTPYLFIFDYDPDDGD 273

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BLAST of Sed0016985 vs. NCBI nr
Match: XP_022999126.1 (uncharacterized protein LOC111493604 [Cucurbita maxima])

HSP 1 Score: 481.5 bits (1238), Expect = 5.0e-132
Identity = 227/274 (82.85%), Postives = 249/274 (90.88%), Query Frame = 0


Query: 6   VELQSSAAMEMETSSSCHEDANPCPICLGAITQPSYLDKCFHKFCYNCIVQWTKVVSGKR 65
           +ELQ +A +EMETSSS  +D NPCPICLG I QPSYLDKCFHKFCYNCIVQWTKVVSGK 
Sbjct: 1   MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKH 60

Query: 66  TCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNQNFQDSFVLSKAHKYRLQCYYTEPGF 125
           +CTLSSIKCPLCKTES SIIHGLDGHCFQRHYVNQ+FQDSF+LSKA KYRLQCYYTEPGF
Sbjct: 61  SCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDSFILSKAQKYRLQCYYTEPGF 120

Query: 126 LDDVFNVQRHWKLRKYLQENQWLAVWLKRELQALIQEEDVDIIMHHLLGLINPFFSRKEP 185
           LDD+FNVQ++WKLRKYLQ NQWL VWLKRELQALIQEEDVDIIMHHLLG I+ FFSR E 
Sbjct: 121 LDDIFNVQKYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEH 180

Query: 186 RYQSETPHSKRERFNSMVCDAAKPFLSARTNRFVLELELFLASGLNIEAYDSVYLQRLGW 245
           RYQ+ETP  KR+RFNSM+ DAAKPFLS R +RFVLELELFLASGLNIEAYDSVYLQRLGW
Sbjct: 181 RYQTETPQLKRDRFNSMILDAAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGW 240

Query: 246 SEPVVPSVAIKEDVGLKPVTPYLYIFDYDPDDDD 280
           ++P  PS+A+ ED+GL+PVTPYL+IFDYDPDD D
Sbjct: 241 NKPFGPSMAV-EDLGLEPVTPYLFIFDYDPDDGD 273

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BLAST of Sed0016985 vs. ExPASy Swiss-Prot
Match: Q80Z37 (E3 ubiquitin-protein ligase Topors OS=Mus musculus OX=10090 GN=Topors PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.3e-10
Identity = 33/101 (32.67%), Postives = 51/101 (50.50%), Query Frame = 0


Query: 25  DANP---CPICLGAITQPSYLDKCFHKFCYNCIVQWTKVVSGKRTCTLSSIKCPLCKTES 84
           DA+P   CPICL      SYLD+C HKFC+ C+ +W+K          +  +CPLCK   
Sbjct: 97  DASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSK----------NKAECPLCKQPF 156

Query: 85  SSIIHGLDGH-CFQRHYVNQNFQDSFVLSKAHKYRLQCYYT 122
            SI H +     F+ + +  ++  SF   +  ++R +   T
Sbjct: 157 DSIFHSVRAEDDFKEYVLRPSYNGSFTNPEVRRFRYRTTMT 187

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BLAST of Sed0016985 vs. ExPASy Swiss-Prot
Match: Q9NS56 (E3 ubiquitin-protein ligase Topors OS=Homo sapiens OX=9606 GN=TOPORS PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 5.0e-10
Identity = 34/96 (35.42%), Postives = 50/96 (52.08%), Query Frame = 0


Query: 25  DANP---CPICLGAITQPSYLDKCFHKFCYNCIVQWTKVVSGKRTCTLSSIKCPLCKTES 84
           DA+P   CPICL      SYLD+C HKFC+ C+ +W+K          +  +CPLCK   
Sbjct: 96  DASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSK----------NKAECPLCKQPF 155

Query: 85  SSIIHGLDGH-CFQRHYVNQNFQDSFVL-SKAHKYR 116
            SI H +     F+ + +  ++  SFV   +  +YR
Sbjct: 156 DSIFHSVRAEDDFKEYVLRPSYNGSFVTPDRRFRYR 181

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BLAST of Sed0016985 vs. ExPASy Swiss-Prot
Match: P29129 (E3 ubiquitin-protein ligase ICP0 OS=Suid herpesvirus 1 (strain Indiana-Funkhauser / Becker) OX=31523 GN=EP0 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 5.7e-06
Identity = 24/61 (39.34%), Postives = 31/61 (50.82%), Query Frame = 0


Query: 29 CPICLGAITQPSYLDKCFHKFCYNCIVQWTKVVSGKRTCTLSSIKCPLCKTESSSIIHGL 88
          CPICL      +    C HKFC +CI +W          TL+S  CPLC    +SI+H +
Sbjct: 46 CPICLDVAATEAQTLPCMHKFCLDCIQRW----------TLTSTACPLCNARVTSILHHV 96

Query: 89 D 90
          D
Sbjct: 106 D 96

[Close]

BLAST of Sed0016985 vs. ExPASy Swiss-Prot
Match: Q9E1W2 (E3 ubiquitin-protein ligase IE61 OS=Cercopithecine herpesvirus 9 (strain DHV) OX=36348 PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 3.7e-05
Identity = 28/80 (35.00%), Postives = 36/80 (45.00%), Query Frame = 0


Query: 18 TSSSCHEDANPCPICLGAITQPSYLDKCFHKFCYNCIVQWTKVVSGKRTCTLSSIKCPLC 77
          TS S     N C IC+ AI+       C H FC+ CI  WT           +S +CPLC
Sbjct: 9  TSGSVASTGN-CAICMSAISGLGKTLPCLHDFCFVCIQTWTS----------TSAQCPLC 68

Query: 78 KTESSSIIHGLDGHCFQRHY 98
          +T  SSI+H +        Y
Sbjct: 69 RTVVSSILHNITSDANYEEY 77

[Close]

BLAST of Sed0016985 vs. ExPASy TrEMBL
Match: A0A6J1DAB4 (uncharacterized protein LOC111018833 OS=Momordica charantia OX=3673 GN=LOC111018833 PE=4 SV=1)

HSP 1 Score: 503.1 bits (1294), Expect = 7.7e-139
Identity = 237/279 (84.95%), Postives = 260/279 (93.19%), Query Frame = 0


Query: 1   MSERPVELQSSAAMEMETSSSCHEDANPCPICLGAITQPSYLDKCFHKFCYNCIVQWTKV 60
           MSE  +ELQS+A  EMET+SS ++D NPCPICLG+I +PSYLDKCFHKFCYNCIVQWTKV
Sbjct: 1   MSESAMELQSTAQKEMETASSSYDDTNPCPICLGSIIRPSYLDKCFHKFCYNCIVQWTKV 60

Query: 61  VSGKRTCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNQNFQDSFVLSKAHKYRLQCYY 120
           VSGKR+C LS IKCPLCKTESSSIIHGLDGHCFQRHYVNQ+FQDSF+LSKAHKYRLQCYY
Sbjct: 61  VSGKRSCILSPIKCPLCKTESSSIIHGLDGHCFQRHYVNQDFQDSFILSKAHKYRLQCYY 120

Query: 121 TEPGFLDDVFNVQRHWKLRKYLQENQWLAVWLKRELQALIQEEDVDIIMHHLLGLINPFF 180
           TEPGFL+D+FNVQR+WKLRKYLQ NQWL VWLKRELQALIQEEDVDIIMHHLLGLINPFF
Sbjct: 121 TEPGFLEDIFNVQRYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGLINPFF 180

Query: 181 SRKEPRYQSETPHSKRERFNSMVCDAAKPFLSARTNRFVLELELFLASGLNIEAYDSVYL 240
           SR E +YQ+E+P  K+E+F+S+V DAAKPFLSAR +RFV ELELFLASGLNIEAYDSVYL
Sbjct: 181 SRNEQKYQTESPEVKQEKFSSIVHDAAKPFLSARADRFVHELELFLASGLNIEAYDSVYL 240

Query: 241 QRLGWSEPVVPSVAIKEDVGLKPVTPYLYIFDYDPDDDD 280
           QRLGWSEPVVPSVAIKED+GLKPVTPYLYIFDYDPDD +
Sbjct: 241 QRLGWSEPVVPSVAIKEDLGLKPVTPYLYIFDYDPDDGE 279

[Close]

BLAST of Sed0016985 vs. ExPASy TrEMBL
Match: A0A6J1G4Z2 (uncharacterized protein LOC111450733 OS=Cucurbita moschata OX=3662 GN=LOC111450733 PE=4 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 6.3e-133
Identity = 228/274 (83.21%), Postives = 250/274 (91.24%), Query Frame = 0


Query: 6   VELQSSAAMEMETSSSCHEDANPCPICLGAITQPSYLDKCFHKFCYNCIVQWTKVVSGKR 65
           +ELQ +A +EMETSSS  +D NPCPICLG I QPSYLDKCFHKFCYNCIVQWTKVVSGK 
Sbjct: 1   MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKH 60

Query: 66  TCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNQNFQDSFVLSKAHKYRLQCYYTEPGF 125
           +CTLSSIKCPLCKTES SIIHGLDGHCFQRHYVNQ+FQDSF+LSKA KYRLQCYYTEPGF
Sbjct: 61  SCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDSFILSKAQKYRLQCYYTEPGF 120

Query: 126 LDDVFNVQRHWKLRKYLQENQWLAVWLKRELQALIQEEDVDIIMHHLLGLINPFFSRKEP 185
           LDD+F+VQ++WKLRKYLQ NQWL VWLKRELQALIQEEDVDIIMHHLLG I+ FFSR EP
Sbjct: 121 LDDIFSVQKYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEP 180

Query: 186 RYQSETPHSKRERFNSMVCDAAKPFLSARTNRFVLELELFLASGLNIEAYDSVYLQRLGW 245
           RYQ+ETP  KRERFNSM+ DAAKPFLS R +RFVLELELFLASGLNIEAYDSVYLQRLGW
Sbjct: 181 RYQTETPQLKRERFNSMILDAAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGW 240

Query: 246 SEPVVPSVAIKEDVGLKPVTPYLYIFDYDPDDDD 280
           ++PV PS+A+ ED+G +PVTPYL+IFDYDPDD D
Sbjct: 241 NKPVGPSMAV-EDLGHEPVTPYLFIFDYDPDDGD 273

[Close]

BLAST of Sed0016985 vs. ExPASy TrEMBL
Match: A0A6J1KC78 (uncharacterized protein LOC111493604 OS=Cucurbita maxima OX=3661 GN=LOC111493604 PE=4 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 2.4e-132
Identity = 227/274 (82.85%), Postives = 249/274 (90.88%), Query Frame = 0


Query: 6   VELQSSAAMEMETSSSCHEDANPCPICLGAITQPSYLDKCFHKFCYNCIVQWTKVVSGKR 65
           +ELQ +A +EMETSSS  +D NPCPICLG I QPSYLDKCFHKFCYNCIVQWTKVVSGK 
Sbjct: 1   MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKH 60

Query: 66  TCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNQNFQDSFVLSKAHKYRLQCYYTEPGF 125
           +CTLSSIKCPLCKTES SIIHGLDGHCFQRHYVNQ+FQDSF+LSKA KYRLQCYYTEPGF
Sbjct: 61  SCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDSFILSKAQKYRLQCYYTEPGF 120

Query: 126 LDDVFNVQRHWKLRKYLQENQWLAVWLKRELQALIQEEDVDIIMHHLLGLINPFFSRKEP 185
           LDD+FNVQ++WKLRKYLQ NQWL VWLKRELQALIQEEDVDIIMHHLLG I+ FFSR E 
Sbjct: 121 LDDIFNVQKYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEH 180

Query: 186 RYQSETPHSKRERFNSMVCDAAKPFLSARTNRFVLELELFLASGLNIEAYDSVYLQRLGW 245
           RYQ+ETP  KR+RFNSM+ DAAKPFLS R +RFVLELELFLASGLNIEAYDSVYLQRLGW
Sbjct: 181 RYQTETPQLKRDRFNSMILDAAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGW 240

Query: 246 SEPVVPSVAIKEDVGLKPVTPYLYIFDYDPDDDD 280
           ++P  PS+A+ ED+GL+PVTPYL+IFDYDPDD D
Sbjct: 241 NKPFGPSMAV-EDLGLEPVTPYLFIFDYDPDDGD 273

[Close]

BLAST of Sed0016985 vs. ExPASy TrEMBL
Match: A0A0A0LLN5 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G021620 PE=4 SV=1)

HSP 1 Score: 473.0 bits (1216), Expect = 8.6e-130
Identity = 223/279 (79.93%), Postives = 249/279 (89.25%), Query Frame = 0


Query: 1   MSERPVELQSSAAMEMETSSSCHEDANPCPICLGAITQPSYLDKCFHKFCYNCIVQWTKV 60
           MS + +ELQS+A+MEMET +S  +  NPCPICLG I Q SYLDKCFH FCYNCIVQWTKV
Sbjct: 1   MSGKSMELQSTASMEMETRTSTSDYTNPCPICLGPINQSSYLDKCFHNFCYNCIVQWTKV 60

Query: 61  VSGKRTCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNQNFQDSFVLSKAHKYRLQCYY 120
           VSGKR+CTLSSIKCPLCKTESSSIIHGLDGH FQRHYVN +FQDSF+LSKAH+YRLQCYY
Sbjct: 61  VSGKRSCTLSSIKCPLCKTESSSIIHGLDGHNFQRHYVNPDFQDSFILSKAHRYRLQCYY 120

Query: 121 TEPGFLDDVFNVQRHWKLRKYLQENQWLAVWLKRELQALIQEEDVDIIMHHLLGLINPFF 180
           TEPGFL+D+F+VQR+WKL+KYLQ NQWL VWLKRELQALIQEEDVDIIMHH LGLIN FF
Sbjct: 121 TEPGFLNDIFDVQRYWKLQKYLQANQWLEVWLKRELQALIQEEDVDIIMHHFLGLINSFF 180

Query: 181 SRKEPRYQSETPHSKRERFNSMVCDAAKPFLSARTNRFVLELELFLASGLNIEAYDSVYL 240
            R EP YQ+ETP  KR+RF+  + DAAKPFLSAR +RF+LELELFLASGLNIEAYDSVYL
Sbjct: 181 RRNEPEYQTETPELKRKRFSQTILDAAKPFLSARADRFILELELFLASGLNIEAYDSVYL 240

Query: 241 QRLGWSEPVVPSVAIKEDVGLKPVTPYLYIFDYDPDDDD 280
           QRLGW++P+VPSVA +ED+GLK VTPYLYIFD DPDD D
Sbjct: 241 QRLGWNKPIVPSVANEEDLGLKSVTPYLYIFDCDPDDGD 279

[Close]

BLAST of Sed0016985 vs. ExPASy TrEMBL
Match: A0A5D3D454 (RING zinc finger protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00310 PE=4 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 1.6e-128
Identity = 221/278 (79.50%), Postives = 250/278 (89.93%), Query Frame = 0


Query: 1   MSERPVELQSSAAMEMETSSSCHEDANPCPICLGAITQPSYLDKCFHKFCYNCIVQWTKV 60
           MSE+ +ELQS+A+ME++TS+S  +  +PCPICLG I Q SYLDKCFH FCYNCIVQWTKV
Sbjct: 1   MSEKSMELQSAASMEIKTSTSTSDYTDPCPICLGPINQSSYLDKCFHNFCYNCIVQWTKV 60

Query: 61  VSGKRTCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNQNFQDSFVLSKAHKYRLQCYY 120
           VSGKR+C LSSIKCPLCKTESSSIIHGLDGH FQRHYVN +FQDSF+LSKAHKYRLQCYY
Sbjct: 61  VSGKRSCRLSSIKCPLCKTESSSIIHGLDGHHFQRHYVNPDFQDSFILSKAHKYRLQCYY 120

Query: 121 TEPGFLDDVFNVQRHWKLRKYLQENQWLAVWLKRELQALIQEEDVDIIMHHLLGLINPFF 180
           TEPGFL+D+F+VQR+WKL+KYLQ NQWL VWLKRELQALIQEEDVDIIMHH +GLIN FF
Sbjct: 121 TEPGFLNDIFDVQRYWKLQKYLQANQWLEVWLKRELQALIQEEDVDIIMHHFVGLINSFF 180

Query: 181 SRKEPRYQSETPHSKRERFNSMVCDAAKPFLSARTNRFVLELELFLASGLNIEAYDSVYL 240
            R EP+YQ+ETP  KR+RF+  + DAAKPFLSAR +RF+LELELFLASGLNIEAYDSVYL
Sbjct: 181 RRNEPKYQTETPELKRKRFSQTILDAAKPFLSARADRFMLELELFLASGLNIEAYDSVYL 240

Query: 241 QRLGWSEPVVPSVAIKEDVGLKPVTPYLYIFDYDPDDD 279
           QRLGW+EP+V SVA +ED+GLK VTPYLYIFD DPDDD
Sbjct: 241 QRLGWNEPIVLSVANEEDLGLKSVTPYLYIFDNDPDDD 278

[Close]

BLAST of Sed0016985 vs. TAIR 10
Match: AT3G05250.1 (RING/U-box superfamily protein )

HSP 1 Score: 290.4 bits (742), Expect = 1.5e-78
Identity = 143/261 (54.79%), Postives = 187/261 (71.65%), Query Frame = 0


Query: 25  DANPCPICLGAITQPSYLDKCFHKFCYNCIVQWTKVVSGKRTCTLSSIKCPLCKTESSSI 84
           D +PCPICLG   + SYLD CFHKFC+NCI QW KVVS K +   SS+ CPLCKTE+ SI
Sbjct: 18  DFDPCPICLGQFLRESYLDTCFHKFCFNCIKQWIKVVSSKASKQRSSVTCPLCKTENLSI 77

Query: 85  IHGLDGHCFQRHYVNQNFQDSFVLSKAHKYRLQCYYTEPGFLDDVFNVQRHWKLRKYLQE 144
           IH  DG  F+RHY++ N  D FVL+K  +YRLQCYYTE GFL DVF+V R WKL+K+LQ 
Sbjct: 78  IHNYDGCSFERHYIDPNIPDGFVLTKEQRYRLQCYYTESGFLADVFDVARFWKLQKFLQP 137

Query: 145 NQWLAVWLKRELQALIQEEDVDIIMHHLLGLINPFFSRKEPRYQSETPHSK---RERFNS 204
           N+ L  WL+RELQAL+QEEDVDI++HHL+G++  F  R + R + ET  ++   +E+F +
Sbjct: 138 NRCLEAWLRRELQALMQEEDVDIVLHHLVGVMESFCKRIKQRRKQETRSAETTNQEQFKA 197

Query: 205 MVCDAAKPFLSARTNRFVLELELFLASGLNIEAYDSVYLQRLGWSEPVVPSVAIKEDVGL 264
           +V +AA+PF+ ART+RFV ELELFLA+GLN+EAYD++Y Q L  +       A +E   +
Sbjct: 198 VVSEAARPFVMARTDRFVDELELFLAAGLNLEAYDAIYKQGLEGNNRREIGAASEEREEV 257

Query: 265 KP------VTPYLYIFDYDPD 277
           +       VTPYL+IF+ D D
Sbjct: 258 EEHNVRTRVTPYLFIFEEDSD 278

[Close]

BLAST of Sed0016985 vs. TAIR 10
Match: AT2G39100.1 (RING/U-box superfamily protein )

HSP 1 Score: 53.5 bits (127), Expect = 3.1e-07
Identity = 60/261 (22.99%), Postives = 98/261 (37.55%), Query Frame = 0


Query: 29  CPICLGAITQ---PSYLDKCFHKFCYNCIVQWTKVVSGKRTCTLSSIK------------ 88
           CPICL  +T+    + +  C H +C  CI +W+   S KR C L + +            
Sbjct: 39  CPICLENLTERRSAAVITVCKHGYCLACIRKWS---SFKRNCPLCNTRFDSWFIVSDFAS 98

Query: 89  -------CPLCKTESSSIIHGLDGHCFQRHYVNQNFQDSFVLSKAHKYRL--QCYYTEPG 148
                   P+ +   +   H    +   R  + Q  +D    S +    L  +  +  PG
Sbjct: 99  RKYHKEQLPILRDRETLTYH--RNNPSDRRRIIQRSRDVLENSSSRSRPLPWRRSFGRPG 158

Query: 149 FLDDVFNVQRHWKLRKYLQENQWLAV---------------------------WLKRELQ 208
            + D    QR  + R  +   Q  AV                           W++RELQ
Sbjct: 159 SVPDSVIFQRKLQWRASIYTKQLRAVRLHSRRLELSLAVNDYTKAKITERIEPWIRRELQ 218

Query: 209 ALIQEEDVDIIMHHLLGLINPFFSRKEPRYQSETPHSKRERFNSMVCDAAKPFLSARTNR 239
           A++ + D  +I+H    L      R+  R   +T     +  +S+     + FLS + + 
Sbjct: 219 AVLGDPDPSVIVHFASALFIKRLERENNRQTGQTGMLVEDEVSSL-----RKFLSDKVDI 278

[Close]

BLAST of Sed0016985 vs. TAIR 10
Match: AT4G10940.1 (RING/U-box protein )

HSP 1 Score: 43.9 bits (102), Expect = 2.5e-04
Identity = 22/73 (30.14%), Postives = 33/73 (45.21%), Query Frame = 0


Query: 8  LQSSAAMEMETSSSCHEDANPCPICLGAITQPSYLDKCFHKFCYNCIVQWTKVVSGKRTC 67
          L    A+E+E +     +   C IC+  I     LD C H FC+ CI  W+ +++     
Sbjct: 10 LVEDEAVEVEHNGMTEIEGERCGICMDIIIDRGVLDCCQHWFCFECIDNWSTIMN----- 69

Query: 68 TLSSIKCPLCKTE 81
                CPLC+ E
Sbjct: 70 -----LCPLCQRE 72

[Close]

BLAST of Sed0016985 vs. TAIR 10
Match: AT3G05670.1 (RING/U-box protein )

HSP 1 Score: 43.1 bits (100), Expect = 4.2e-04
Identity = 23/61 (37.70%), Postives = 29/61 (47.54%), Query Frame = 0


Query: 27  NPCPICLGAITQ---PSYLDKCFHKFCYNCIVQWTKVVSGKRTCTLSSIKCPLCKTESSS 85
           N C ICL           LD C H FC+ CI++W+KV S          +CPLCK    +
Sbjct: 411 NVCGICLSEEDMRRLKGTLDCCSHYFCFTCIMEWSKVES----------RCPLCKQRFRT 461

The following BLAST results are available for this feature:

BLAST of Sed0016985 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150768.1	1.6e-138	84.95	uncharacterized protein LOC111018833 [Momordica charantia]	[more]
XP_038889020.1	7.9e-138	84.89	uncharacterized protein LOC120078783 isoform X1 [Benincasa hispida]	[more]
XP_022946760.1	1.3e-132	83.21	uncharacterized protein LOC111450733 [Cucurbita moschata]	[more]
XP_023545827.1	2.9e-132	82.85	uncharacterized protein LOC111805146 [Cucurbita pepo subsp. pepo]	[more]
XP_022999126.1	5.0e-132	82.85	uncharacterized protein LOC111493604 [Cucurbita maxima]	[more]

BLAST of Sed0016985 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q80Z37	2.3e-10	32.67	E3 ubiquitin-protein ligase Topors OS=Mus musculus OX=10090 GN=Topors PE=1 SV=1	[more]
Q9NS56	5.0e-10	35.42	E3 ubiquitin-protein ligase Topors OS=Homo sapiens OX=9606 GN=TOPORS PE=1 SV=1	[more]
P29129	5.7e-06	39.34	E3 ubiquitin-protein ligase ICP0 OS=Suid herpesvirus 1 (strain Indiana-Funkhause...	[more]
Q9E1W2	3.7e-05	35.00	E3 ubiquitin-protein ligase IE61 OS=Cercopithecine herpesvirus 9 (strain DHV) OX...	[more]

BLAST of Sed0016985 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DAB4	7.7e-139	84.95	uncharacterized protein LOC111018833 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A6J1G4Z2	6.3e-133	83.21	uncharacterized protein LOC111450733 OS=Cucurbita moschata OX=3662 GN=LOC1114507...	[more]
A0A6J1KC78	2.4e-132	82.85	uncharacterized protein LOC111493604 OS=Cucurbita maxima OX=3661 GN=LOC111493604...	[more]
A0A0A0LLN5	8.6e-130	79.93	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G021620 P...	[more]
A0A5D3D454	1.6e-128	79.50	RING zinc finger protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]

BLAST of Sed0016985 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05250.1	1.5e-78	54.79	RING/U-box superfamily protein	[more]
AT2G39100.1	3.1e-07	22.99	RING/U-box superfamily protein	[more]
AT4G10940.1	2.5e-04	30.14	RING/U-box protein	[more]
AT3G05670.1	4.2e-04	37.70	RING/U-box protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 29..77 e-value: 4.2E-5 score: 32.9
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 29..78 score: 12.1057
IPR018957	Zinc finger, C3HC4 RING-type	PFAM	PF00097	zf-C3HC4	coord: 29..77 e-value: 5.0E-9 score: 35.9
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 8..114 e-value: 1.9E-11 score: 45.2
None	No IPR available	PANTHER	PTHR47692	RING/U-BOX SUPERFAMILY PROTEIN	coord: 16..162 coord: 167..256
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 23..86
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 45..54

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0016985.1	Sed0016985.1	mRNA
Sed0016985.2	Sed0016985.2	mRNA
Sed0016985.3	Sed0016985.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing
molecular_function	GO:0046872	metal ion binding