Sed0016831 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTTCTTATTGTTGTCAGATTCCAGGGATTGTAGATTCTGAGATAGCGGAGGCAATAGCAGTATGTAATGGCATGGACCTTGCGATGGATCTCGGATTTCAAAGAATTAAAATGGAGACGGATGCTTTGCGTGTGGTAAATCTTCTCAACAACCAAATGCATTGTCGATCGGAAGTTGGAAGGCTTGTCGAAGAGATAAAGAGCTTAGCGAGAAACTTCTTGTTCGTGAGCTTTGGGTGGTGTGGACGAGATGCGAATTCTATTGCTCACAAGCTAGCTTAG ATGACTTCTTATTGTTGTCAGATTCCAGGGATTGTAGATTCTGAGATAGCGGAGGCAATAGCAGTATGTAATGGCATGGACCTTGCGATGGATCTCGGATTTCAAAGAATTAAAATGGAGACGGATGCTTTGCGTGTGGTAAATCTTCTCAACAACCAAATGCATTGTCGATCGGAAGTTGGAAGGCTTGTCGAAGAGATAAAGAGCTTAGCGAGAAACTTCTTGTTCGTGAGCTTTGGGTGGTGTGGACGAGATGCGAATTCTATTGCTCACAAGCTAGCTTAG ATGACTTCTTATTGTTGTCAGATTCCAGGGATTGTAGATTCTGAGATAGCGGAGGCAATAGCAGTATGTAATGGCATGGACCTTGCGATGGATCTCGGATTTCAAAGAATTAAAATGGAGACGGATGCTTTGCGTGTGGTAAATCTTCTCAACAACCAAATGCATTGTCGATCGGAAGTTGGAAGGCTTGTCGAAGAGATAAAGAGCTTAGCGAGAAACTTCTTGTTCGTGAGCTTTGGGTGGTGTGGACGAGATGCGAATTCTATTGCTCACAAGCTAGCTTAG MTSYCCQIPGIVDSEIAEAIAVCNGMDLAMDLGFQRIKMETDALRVVNLLNNQMHCRSEVGRLVEEIKSLARNFLFVSFGWCGRDANSIAHKLA Homology
BLAST of Sed0016831 vs. NCBI nr
Match: KAF7825347.1 (uncharacterized protein G2W53_016511 [Senna tora]) HSP 1 Score: 73.2 bits (178), Expect = 1.4e-09 Identity = 37/88 (42.05%), Postives = 55/88 (62.50%), Query Frame = 0
BLAST of Sed0016831 vs. NCBI nr
Match: MBA0731259.1 (hypothetical protein [Gossypium laxum]) HSP 1 Score: 70.1 bits (170), Expect = 1.2e-08 Identity = 39/91 (42.86%), Postives = 54/91 (59.34%), Query Frame = 0
BLAST of Sed0016831 vs. NCBI nr
Match: TXG69190.1 (hypothetical protein EZV62_004125 [Acer yangbiense]) HSP 1 Score: 69.3 bits (168), Expect = 2.0e-08 Identity = 34/94 (36.17%), Postives = 54/94 (57.45%), Query Frame = 0
BLAST of Sed0016831 vs. NCBI nr
Match: KAE8813045.1 (hypothetical protein D1007_09808 [Hordeum vulgare]) HSP 1 Score: 68.9 bits (167), Expect = 2.6e-08 Identity = 34/94 (36.17%), Postives = 54/94 (57.45%), Query Frame = 0
BLAST of Sed0016831 vs. NCBI nr
Match: KAF7801517.1 (reverse transcriptase [Senna tora]) HSP 1 Score: 68.2 bits (165), Expect = 4.4e-08 Identity = 34/88 (38.64%), Postives = 53/88 (60.23%), Query Frame = 0
BLAST of Sed0016831 vs. ExPASy TrEMBL
Match: A0A7J9B6E6 (RNase H domain-containing protein OS=Gossypium laxum OX=34288 GN=Golax_023064 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 5.6e-09 Identity = 39/91 (42.86%), Postives = 54/91 (59.34%), Query Frame = 0
BLAST of Sed0016831 vs. ExPASy TrEMBL
Match: A0A5C7IIT4 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_004125 PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 9.6e-09 Identity = 34/94 (36.17%), Postives = 54/94 (57.45%), Query Frame = 0
BLAST of Sed0016831 vs. ExPASy TrEMBL
Match: A0A2N9H585 (RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS34683 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 1.3e-08 Identity = 34/94 (36.17%), Postives = 53/94 (56.38%), Query Frame = 0
BLAST of Sed0016831 vs. ExPASy TrEMBL
Match: A0A5J9SXC3 (RNase H domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_50809 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 3.6e-08 Identity = 40/85 (47.06%), Postives = 52/85 (61.18%), Query Frame = 0
BLAST of Sed0016831 vs. ExPASy TrEMBL
Match: V4UMR3 (RNase H domain-containing protein (Fragment) OS=Citrus clementina OX=85681 GN=CICLE_v10027161mg PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 8.1e-08 Identity = 38/97 (39.18%), Postives = 55/97 (56.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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