Sed0016201 (gene) Chayote v1

Overview


Name	Sed0016201
Type	gene
Organism	Sechium edule (Chayote v1)
Description	YABBY protein
Location	LG08: 4823206 .. 4827402 (+)
RNA-Seq Expression	Sed0016201
Synteny	Sed0016201

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTGTTTATGTAGAAAGAGAGCTGGAAGTTTTACTGTATCCATACAGAATCATCCATTTACCAATACCAAGAACCTAAGGGAATCCATCCAGAAGCAAAAAAAAAAAAAGAAAAAAAAGGAAAGAAAAAAACCCTCTATTTATTCTTCCACCTTTCTTCTTAAATTTCTCATTTAAGTTTCTGCAAATTAATTGCAAACACATCTTTTCTTCTTCTAAAGAGGAAAAGTGCTGTTTTTGTTATTTTGTTTTTGTGAATTTGGCTGAGAGAAAAATTATTAGATATCAAATACACCATGTCAAGCAGCTGCATAGATATTGCACCTGAGCAACTCTGCTACATCCCTTGCAACTTTTGCAATATTGTTCTTGCGGTACATACCTTTCCATCTCTTAAACTCTTTTTCTTTTCTTTTTTGGTTAATTTTGGCTATTTTTTGTGTTTTTTTTGTAGATCTTGATGAAAAATAAGAAATGGGGTTGGGGTTTTTATAATTTTGATTTTGAATTTTGTCAGGTCTCTATCTTTTTGGACACTTTTTTCTTTTCTTCTTCCCTTCTCTTCTTGTTTTGCAGTCAATGAAAAGTCATATATGCCTGAAAATTGCATCTTCATTTGTGGTTTTTGTTTGACAAGTTTTTAATTTGGGAAATTTTGGGGTTGGAATTTCAAAGTTGGAAAAGATAAGCATTGGATGACAAGGATGATGAAGACAAGTCATCAATCCTTTGGTTTCCTCAACCAAAATGCCTTTTCTTTTTTCTGAAAAAAATGACAATCTCTATGAGCCTTCAAACCCCAGCTGGTTTAGCTCAATGGAGAATTTTTCCAATGAAGATCTCACTCCAAACAAAAAGGCCAAATTTTTCCACCTCAAAACCAAATATACATTTCTAGGTTAAACTTTCATACTCTAAAATATATTATAATCTACCGACTTAAGCTTTTGGGTTTGATTCTCGTTTGAAATTAGCATTCAAATTCTCGATCTTTCAATGCTTCCAAAGATTTACATAATTTAGTTAAAAATGGAATGATATTTGATGCTAATGATAAGGAAACTCCTAATGAAGAAGATCTCATCACTCCAAACATAAAGGCCTATTTGTTTTTACCCAAAACCAAATACAAATTTCTAAGTTAAACTTTCATACTCCAAAATATACCAGAATCTAGCTATCCGCTTAAGTTTCTAGGTTTGATTCTCGTCCGAAATTAGCATTCAAATTCTAGATCTTTCAATGCTTCCATAGATTTACATTATTTAGTTAAAAAAAGGAATGGTATATGATGATAATGATAAGGAAACTCCTAATAAAAAAGTTCTCATCATTCCAAACAAAAAGGCTTATTTTTCCTTACCCAAAACCACCACAAATTTCTAGGTTAAACTTTCATTCTCCAAAATATAACACATAATCTATCCGCTTAAGCTTTTGGGGTTGATTCTCGTTCGAAATTAGAGTTCAAATTCCCAATCTTTTCAATACTCCCATAGCTTTACACAATTTAGTTGAAAATGAATGATATTTTGATACAAATGATGATGATAATAATGATAATGATGAACAGGTGAGTGTTCCATGCAATAGCTTGTTTGATATTGTGACAGTCAGATGTGGGCACTGCACAAATCTGTGGTCCGTGAATATGGCTGCTGCATTTCAGTCACTTTCTTGGCAAGATGTTCAGGTAACCCTAAAACCCCTAACCCTGAAAAAAAAAAAAAAAAAAACAAACAAACTTTTTATTTTCTTCCACCTTATTCTTAAGGAGTTCAATTTCTCTCTATCTATTTCATGTACTGGATTCTTCTTTAGGGCACAAATTTTCATCCTTTTTGAGAAAATCGATGTGACCCAGAATCTGAAATTTTAAATTATTAGACCCCATTTATTCAAAATTATATTTTTAATTAATTAGAGCACTGAAAACCCTAGCTAGCTTTATTTATAGGTATCCAGCCGCCAGAATCCTTTGTTTTACTCTTTTATCCATGAGTTTTTTCACCCTTTTCTTTTAGGTTTTGTTCTTTTTCTTACATTTCATGGGGACCCTTTTTATTTTTTATTTTCTTGAGAAGTGTTTTTTTTCTCTTTCTCTTAGCCTTGTTTGTTAGATTGTGCTTTTGGGGTTTAGGTTTAGGGTTGTTTAGGATTTGTTTAATTTTCTAGGGAAGAGAGCTTTGAGCTAGGCAGTTTAGCTAGGTTTTTTGTCATGTATTGTAGCAACTCAGAGAAAAAGAAAAAGAGAGTCAAATAAAACCAGGTTTTTTTTTAATAAAAAATAATTATTATAAATTAAGTCCCTTTTGACTTGGTTTGAGATTGAACTGCCAATGTGGGTATTATATGCTTTATTTCTAACTGAATCAGTCATTTCAATGTTGGTATATTTCCTTTTGAGTTCTCTCATGAAACATCATTTCACAAACTCCCTTCCCCTTCTCCAATAGTTCTTCTCAAAAGACTTGACATACCCATCACTTATTTGAAATCAAAATAATGACCATTGGACCTTCTAACATCAATCATAAGAGGTGTTTGGGATAAGGAGAACAAAAGTAATTGAGAGAGGGTTAGAATTAGGTCAGGAAAATGATTATGGAGAACGACTATTTATGTTTGGTGTGAAGATAACTAATTATGGAGAGAATATAACCGTGAATCTGGACACAGAATAAAAAACAATTACAAACGAATGAGAATTGGTTACAGGGAGAATGAAATTGGCTGCAGGGAAATGAGATTAGGTGGATAATGATTATTGTCGATAGCTTAAACACAGACAATTCTCCTCTTCTCATTCTGGCATTTGACTTCTTTGCTCCAAACACCTCTTAAAACATGATTGACTTAACGATTAAACTATACTCGTGCTAGCAATAAAAACAACAACTATCTCAAATGAATATCATCACTCTTATACTAAAAAAAGCTACAATTTTGGGCATAAAAAATTATAGGTTCCAAATTACCATCTGTACACTTCTAGTGGACCTGATTTTCAGGCTGATTTTGGATCCTCATCCAAATGTAACAATAATAAGATGGAAATTCGAGCACCCACTACAATTGCAGCAGAGCAAAGGGCTGTGAATCGACGTCAGTATAATTTCACTTTCCTTTTTTATTATTATTTTTTATAATTTAAAGTATTATTTATTTACTTTGTTCTTCAAATCTTTAAAAAAAAAAAATTATGAATTGTTGTTATCGTTTTTCAGCTCCCGAGAAGAGGCAGAGAGTACCTTCTGCATATAATCAGTTCATAAAGTGAGTAACCAAAACCTTCACAAGTGCTTTCTCTATGTCATATTTTTTTGAAAAATTTTATTCTTTAATATTTCAAATTGATTCATTGTTCAATTTATCTTAAGCTTAATCTTAGTAGTTTTTTATGTTGGTTTTAAGGAAATGATTCAATCTATGATGTTGTTTCAGAGAGGAAATACAAAGGATTAAGGCAAATAATCCCGAGATTAGCCATAGAGTAGCTTTCAGCACAGCAGCTAAAAACGTAAGTTTTTTTTAATTCAACAATATTTGAGACTCAAATCTGTAACCAACTGGTTACCAAAAACCTAAGCTAATTGATGATAATATTTTTTTTCATCATAATCGAGTCAATTTTTTGTTTGATAAATTTATAATCTGATTGGTTAAACATATGATTAGTGGGCACACTTTCCTCGTATTCACTTTGGTCTCATGTTGGAAACCAACAATCAAGTGAAGCTAGATGATGTAAGTACTAAATTCATTATATTTTGTTGTTAATTAATTTTGAACACAATTCATCTAATTAAACTCAATTGAATTTGATGAAATTAATTCTCACTAATCTTGTTTAATCTTTTGTTTTTTAGGGTTCTGAGCGTTTAATGTCAAGGGCCGCTCTATTAAACAAATGAAGTGATCGATGAAATAGGCTGCCTTTTTCAACTCTAAGTTCTGTGATTTTCAAATGTTTCTTATTTCTTCATCCATAAAACAAAAGGCTATGACTTGAATTTGTTGTTCAATTCAAGTGACAATTATTATTAATTTTCATCTTTATTGGGTTGCAAATGTTTTCTAATTATGTTATCAAAATATGACTTGAGCTGCCACAAAATCCACTCTCTCTCTTTCTTGATCTTTTTTCTAATACAAACATTTTCTGTACTAATTTCCATAATCAAGTTAACTTTCAG

mRNA sequence

ATTTTGTTTATGTAGAAAGAGAGCTGGAAGTTTTACTGTATCCATACAGAATCATCCATTTACCAATACCAAGAACCTAAGGGAATCCATCCAGAAGCAAAAAAAAAAAAAGAAAAAAAAGGAAAGAAAAAAACCCTCTATTTATTCTTCCACCTTTCTTCTTAAATTTCTCATTTAAGTTTCTGCAAATTAATTGCAAACACATCTTTTCTTCTTCTAAAGAGGAAAAGTGCTGTTTTTGTTATTTTGTTTTTGTGAATTTGGCTGAGAGAAAAATTATTAGATATCAAATACACCATGTCAAGCAGCTGCATAGATATTGCACCTGAGCAACTCTGCTACATCCCTTGCAACTTTTGCAATATTGTTCTTGCGGTGAGTGTTCCATGCAATAGCTTGTTTGATATTGTGACAGTCAGATGTGGGCACTGCACAAATCTGTGGTCCGTGAATATGGCTGCTGCATTTCAGTCACTTTCTTGGCAAGATGTTCAGGTTCCAAATTACCATCTGTACACTTCTAGTGGACCTGATTTTCAGGCTGATTTTGGATCCTCATCCAAATGTAACAATAATAAGATGGAAATTCGAGCACCCACTACAATTGCAGCAGAGCAAAGGGCTGTGAATCGACCTCCCGAGAAGAGGCAGAGAGTACCTTCTGCATATAATCAGTTCATAAAAGAGGAAATACAAAGGATTAAGGCAAATAATCCCGAGATTAGCCATAGAGTAGCTTTCAGCACAGCAGCTAAAAACTGGGCACACTTTCCTCGTATTCACTTTGGTCTCATGTTGGAAACCAACAATCAAGTGAAGCTAGATGATGGTTCTGAGCGTTTAATGTCAAGGGCCGCTCTATTAAACAAATGAAGTGATCGATGAAATAGGCTGCCTTTTTCAACTCTAAGTTCTGTGATTTTCAAATGTTTCTTATTTCTTCATCCATAAAACAAAAGGCTATGACTTGAATTTGTTGTTCAATTCAAGTGACAATTATTATTAATTTTCATCTTTATTGGGTTGCAAATGTTTTCTAATTATGTTATCAAAATATGACTTGAGCTGCCACAAAATCCACTCTCTCTCTTTCTTGATCTTTTTTCTAATACAAACATTTTCTGTACTAATTTCCATAATCAAGTTAACTTTCAG

Coding sequence (CDS)

ATGTCAAGCAGCTGCATAGATATTGCACCTGAGCAACTCTGCTACATCCCTTGCAACTTTTGCAATATTGTTCTTGCGGTGAGTGTTCCATGCAATAGCTTGTTTGATATTGTGACAGTCAGATGTGGGCACTGCACAAATCTGTGGTCCGTGAATATGGCTGCTGCATTTCAGTCACTTTCTTGGCAAGATGTTCAGGTTCCAAATTACCATCTGTACACTTCTAGTGGACCTGATTTTCAGGCTGATTTTGGATCCTCATCCAAATGTAACAATAATAAGATGGAAATTCGAGCACCCACTACAATTGCAGCAGAGCAAAGGGCTGTGAATCGACCTCCCGAGAAGAGGCAGAGAGTACCTTCTGCATATAATCAGTTCATAAAAGAGGAAATACAAAGGATTAAGGCAAATAATCCCGAGATTAGCCATAGAGTAGCTTTCAGCACAGCAGCTAAAAACTGGGCACACTTTCCTCGTATTCACTTTGGTCTCATGTTGGAAACCAACAATCAAGTGAAGCTAGATGATGGTTCTGAGCGTTTAATGTCAAGGGCCGCTCTATTAAACAAATGA

Protein sequence

MSSSCIDIAPEQLCYIPCNFCNIVLAVSVPCNSLFDIVTVRCGHCTNLWSVNMAAAFQSLSWQDVQVPNYHLYTSSGPDFQADFGSSSKCNNNKMEIRAPTTIAAEQRAVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPEISHRVAFSTAAKNWAHFPRIHFGLMLETNNQVKLDDGSERLMSRAALLNK

Homology

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BLAST of Sed0016201 vs. NCBI nr
Match: XP_022933458.1 (axial regulator YABBY 5-like [Cucurbita moschata] >XP_023529551.1 axial regulator YABBY 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 358.2 bits (918), Expect = 4.3e-95
Identity = 173/189 (91.53%), Postives = 180/189 (95.24%), Query Frame = 0


Query: 3   SSCIDIAPEQLCYIPCNFCNIVLAVSVPCNSLFDIVTVRCGHCTNLWSVNMAAAFQSLSW 62
           SSCIDIAPEQLCYIPCNFCNIVLAVSVPC+SLFDIVTVRCGHCTNLWSVNMAAAFQSLSW
Sbjct: 2   SSCIDIAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLSW 61

Query: 63  QDVQVPNYHLYTSSGPDFQADFGSSSKCNNNKMEIRAPTTIAAEQRAVNRPPEKRQRVPS 122
           QDVQVPNY+LYTSSGPDFQ DFGSSSKC+NNKM+IR   TIAAE+R VNRPPEKRQRVPS
Sbjct: 62  QDVQVPNYNLYTSSGPDFQGDFGSSSKCDNNKMQIRDSATIAAEERVVNRPPEKRQRVPS 121

Query: 123 AYNQFIKEEIQRIKANNPEISHRVAFSTAAKNWAHFPRIHFGLMLETNNQVKLDDGSERL 182
           AYNQFIKEEI+RIKA NPEISHR AFSTAAKNWAHFPRIHFGLM ETNNQVK+DDGSERL
Sbjct: 122 AYNQFIKEEIRRIKAKNPEISHREAFSTAAKNWAHFPRIHFGLMFETNNQVKIDDGSERL 181

Query: 183 MSRAALLNK 192
           MS AALLNK
Sbjct: 182 MSMAALLNK 190

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BLAST of Sed0016201 vs. NCBI nr
Match: XP_023004055.1 (axial regulator YABBY 5-like [Cucurbita maxima])

HSP 1 Score: 357.5 bits (916), Expect = 7.4e-95
Identity = 175/190 (92.11%), Postives = 180/190 (94.74%), Query Frame = 0


Query: 3   SSCIDIAPEQLCYIPCNFCNIVLAVSVPCNSLFDIVTVRCGHCTNLWSVNMAAAFQSLSW 62
           SSCIDIAPEQLCYIPCNFCNIVLAVSVPC+SLFDIVTVRCGHCTNLWSVNMAAAFQSLSW
Sbjct: 2   SSCIDIAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLSW 61

Query: 63  QDVQVPNYHLYTSSGPDFQADFGSSSKC-NNNKMEIRAPTTIAAEQRAVNRPPEKRQRVP 122
           QDVQVPNY+LYTSSGPDFQ DFGSSSKC NNNKM+IR  TTIAAE+R VNRPPEKRQRVP
Sbjct: 62  QDVQVPNYNLYTSSGPDFQGDFGSSSKCDNNNKMQIRDSTTIAAEERVVNRPPEKRQRVP 121

Query: 123 SAYNQFIKEEIQRIKANNPEISHRVAFSTAAKNWAHFPRIHFGLMLETNNQVKLDDGSER 182
           SAYNQFIKEEIQRIKA NPEISHR AFSTAAKNWAHFPRIHFGLM ETNNQ K+DDGSER
Sbjct: 122 SAYNQFIKEEIQRIKAKNPEISHREAFSTAAKNWAHFPRIHFGLMFETNNQAKIDDGSER 181

Query: 183 LMSRAALLNK 192
           LMS AALLNK
Sbjct: 182 LMSMAALLNK 191

[Close]

BLAST of Sed0016201 vs. NCBI nr
Match: KAG6587892.1 (Axial regulator YABBY 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 356.3 bits (913), Expect = 1.6e-94
Identity = 172/189 (91.01%), Postives = 179/189 (94.71%), Query Frame = 0


Query: 3   SSCIDIAPEQLCYIPCNFCNIVLAVSVPCNSLFDIVTVRCGHCTNLWSVNMAAAFQSLSW 62
           SSCIDIAPEQLCYIPCNFCNIVLAVSVPC+SLFDIVTVRCGHCTNLWSVNMAAAFQSLSW
Sbjct: 2   SSCIDIAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLSW 61

Query: 63  QDVQVPNYHLYTSSGPDFQADFGSSSKCNNNKMEIRAPTTIAAEQRAVNRPPEKRQRVPS 122
           QDVQVPNY+LYTS GPDFQ DFGSSSKC+NNKM+IR   TIAAE+R VNRPPEKRQRVPS
Sbjct: 62  QDVQVPNYNLYTSCGPDFQGDFGSSSKCDNNKMQIRDSATIAAEERVVNRPPEKRQRVPS 121

Query: 123 AYNQFIKEEIQRIKANNPEISHRVAFSTAAKNWAHFPRIHFGLMLETNNQVKLDDGSERL 182
           AYNQFIKEEI+RIKA NPEISHR AFSTAAKNWAHFPRIHFGLM ETNNQVK+DDGSERL
Sbjct: 122 AYNQFIKEEIRRIKAKNPEISHREAFSTAAKNWAHFPRIHFGLMFETNNQVKIDDGSERL 181

Query: 183 MSRAALLNK 192
           MS AALLNK
Sbjct: 182 MSMAALLNK 190

[Close]

BLAST of Sed0016201 vs. NCBI nr
Match: XP_022144840.1 (axial regulator YABBY 5-like [Momordica charantia])

HSP 1 Score: 352.1 bits (902), Expect = 3.1e-93
Identity = 174/190 (91.58%), Postives = 180/190 (94.74%), Query Frame = 0


Query: 3   SSCIDIAPEQLCYIPCNFCNIVLAVSVPCNSLFDIVTVRCGHCTNLWSVNMAAAFQSLSW 62
           +SCIDIAPEQLCYIPCNFCNIVLAVSVPC+SLFDIVTVRCGHCTNLWSVNMAAAFQSLSW
Sbjct: 2   ASCIDIAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLSW 61

Query: 63  QDVQVPNYHLYTSSGPDFQADFGSSSKCNNNKMEIRAPTTIAAEQRAVNRPPEKRQRVPS 122
           QDVQVPNY+LY+ SGPDFQ DFGSSSKCNNNKMEIRAPTTI AE+R VNRPPEKRQRVPS
Sbjct: 62  QDVQVPNYNLYSCSGPDFQGDFGSSSKCNNNKMEIRAPTTIPAEERVVNRPPEKRQRVPS 121

Query: 123 AYNQFIKEEIQRIKANNPEISHRVAFSTAAKNWAHFPRIHFGLMLET-NNQVKLDDGSER 182
           AYNQFIKEEIQRIKANNPEISHR AFSTAAKNWAHFPRIHFGLMLET NNQVKLDDG   
Sbjct: 122 AYNQFIKEEIQRIKANNPEISHREAFSTAAKNWAHFPRIHFGLMLETNNNQVKLDDG--- 181

Query: 183 LMSRAALLNK 192
            +SRAALLNK
Sbjct: 182 -LSRAALLNK 187

[Close]

BLAST of Sed0016201 vs. NCBI nr
Match: XP_004150030.1 (axial regulator YABBY 5-like [Cucumis sativus] >KAE8653111.1 hypothetical protein Csa_019794 [Cucumis sativus])

HSP 1 Score: 351.3 bits (900), Expect = 5.3e-93
Identity = 171/193 (88.60%), Postives = 181/193 (93.78%), Query Frame = 0


Query: 1   MSSSCIDIAPEQLCYIPCNFCNIVLAVSVPCNSLFDIVTVRCGHCTNLWSVNMAAAFQSL 60
           M+++C+DIAPEQLCYIPCNFCNIVLAVSVPC+SLFDIVTVRCGHCTNLWSVNMAAAF SL
Sbjct: 1   MATTCLDIAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFHSL 60

Query: 61  SWQDVQVPNYHLYTSSGPDFQADFGSSSKCNN--NKMEIRAPTTIAAEQRAVNRPPEKRQ 120
           SWQDVQVP+Y+LY  +G DFQ DFGSSSKCNN  NKMEIR PTTI AE+R VNRPPEKRQ
Sbjct: 61  SWQDVQVPSYNLYGCNGADFQGDFGSSSKCNNNVNKMEIRVPTTIPAEERVVNRPPEKRQ 120

Query: 121 RVPSAYNQFIKEEIQRIKANNPEISHRVAFSTAAKNWAHFPRIHFGLMLETNNQVKLDDG 180
           RVPSAYNQFIKEEIQRIKA+NPEISHR AFSTAAKNWAHFPRIHFGLMLETNNQVKLDDG
Sbjct: 121 RVPSAYNQFIKEEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLETNNQVKLDDG 180

Query: 181 SERLMSRAALLNK 192
           SERLM RAALLNK
Sbjct: 181 SERLMPRAALLNK 193

[Close]

BLAST of Sed0016201 vs. ExPASy Swiss-Prot
Match: Q8GW46 (Axial regulator YABBY 5 OS=Arabidopsis thaliana OX=3702 GN=YAB5 PE=1 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 8.6e-62
Identity = 120/168 (71.43%), Postives = 135/168 (80.36%), Query Frame = 0


Query: 8   IAPEQLCYIPCNFCNIVLAVSVPCNSLFDIVTVRCGHCTNLWSVNMAAAFQSLSWQDVQV 67
           +A EQLCYIPCNFCNI+LAV+VPC+SLFDIVTVRCGHCTNLWSVNMAAA QSLS  + Q 
Sbjct: 6   MATEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSLSRPNFQA 65

Query: 68  PNYHLYTSSGPDFQADFGSSSKCNNNKMEIRAPTTIAAEQRAVNRPPEKRQRVPSAYNQF 127
            NY +          ++GSSS+ ++ K+  R  T    EQR VNRPPEKRQRVPSAYNQF
Sbjct: 66  TNYAV---------PEYGSSSR-SHTKIPSRISTRTITEQRIVNRPPEKRQRVPSAYNQF 125

Query: 128 IKEEIQRIKANNPEISHRVAFSTAAKNWAHFPRIHFGLMLETNNQVKL 176
           IKEEIQRIKANNP+ISHR AFSTAAKNWAHFP IHFGLMLE+N Q K+
Sbjct: 126 IKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLESNKQAKI 163

[Close]

BLAST of Sed0016201 vs. ExPASy Swiss-Prot
Match: Q10FZ7 (Protein YABBY 2 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB2 PE=2 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.6e-44
Identity = 95/169 (56.21%), Postives = 118/169 (69.82%), Query Frame = 0


Query: 9   APEQLCYIPCNFCNIVLAVSVPCNSLFDIVTVRCGHCTNLWSVNMAAAFQSLSWQDVQVP 68
           APE +CY+ CNFCN + AVSVP NS+ +IVTVRCGHCT+L SVN+    Q+L  +D    
Sbjct: 8   APEHVCYVHCNFCNTIFAVSVPSNSMLNIVTVRCGHCTSLLSVNLRGLVQALPAEDHLQD 67

Query: 69  NYHLYTSSGPDFQADFGSSSKCNNNKMEIRAPTTIAAEQRAVNRPPEKRQRVPSAYNQFI 128
           N  ++  S  +  +++GSSS+     M      T   E     RPPEKRQRVPSAYN+FI
Sbjct: 68  NLKMHNMSFRENYSEYGSSSRYGRVPMMFSKNDT---EHMLHVRPPEKRQRVPSAYNRFI 127

Query: 129 KEEIQRIKANNPEISHRVAFSTAAKNWAHFPRIHFGLMLETNNQVKLDD 178
           KEEI+RIKANNP+ISHR AFSTAAKNWAHFP IHFGL    +++ KLD+
Sbjct: 128 KEEIRRIKANNPDISHREAFSTAAKNWAHFPNIHFGLGSHESSK-KLDE 172

[Close]

BLAST of Sed0016201 vs. ExPASy Swiss-Prot
Match: Q9XFB0 (Putative axial regulator YABBY 2 OS=Arabidopsis thaliana OX=3702 GN=YAB2 PE=1 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 5.8e-42
Identity = 97/178 (54.49%), Postives = 117/178 (65.73%), Query Frame = 0


Query: 6   IDIAPEQLCYIPCNFCNIVLAVSVPCNSLFDIVTVRCGHCTNLWSVNMAAAFQSLS---- 65
           +D + E++CY+ C+FC  +LAVSVP  SLF +VTVRCGHCTNL S+N+  +    S    
Sbjct: 3   VDFSSERVCYVHCSFCTTILAVSVPYASLFTLVTVRCGHCTNLLSLNIGVSLHQTSAPPI 62

Query: 66  WQDVQVPNYHLYTSSGPDFQADFGSSSKCNNNKMEIRAPTTIAAEQRAVNRPPEKRQRVP 125
            QD+Q    H   ++    + D  SSS+  NN  E        A +    RPPEKRQRVP
Sbjct: 63  HQDLQPHRQH---TTSLVTRKDCASSSRSTNNLSE---NIDREAPRMPPIRPPEKRQRVP 122

Query: 126 SAYNQFIKEEIQRIKANNPEISHRVAFSTAAKNWAHFPRIHFGLMLETNNQVKLDDGS 180
           SAYN+FIKEEIQRIKA NPEISHR AFSTAAKNWAHFP IHFGL L+ N + K  D S
Sbjct: 123 SAYNRFIKEEIQRIKACNPEISHREAFSTAAKNWAHFPHIHFGLKLDGNKKGKQLDQS 174

[Close]

BLAST of Sed0016201 vs. ExPASy Swiss-Prot
Match: Q2QM17 (Protein YABBY 6 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB6 PE=2 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 2.2e-41
Identity = 98/177 (55.37%), Postives = 117/177 (66.10%), Query Frame = 0


Query: 8   IAP-EQLCYIPCNFCNIVLAVSVPCNSLFDIVTVRCGHCTNLWSVNMAAAFQSLSWQDVQ 67
           IAP EQ+CY+ CNFCN +LAVSVP NS+ +IVTVRCGHCTNL SVN+     S     +Q
Sbjct: 5   IAPAEQVCYVHCNFCNTILAVSVPGNSMLNIVTVRCGHCTNLLSVNLRGLMHSA--PALQ 64

Query: 68  VPNYHLYTSSG-------PDFQADFGSSSKCNNNKMEIRAPTTIAA-----------EQR 127
             ++H    SG            +FG S+  +++K  +R P   AA           EQ 
Sbjct: 65  DHHHHHLQESGLSGCFRDQSGYPEFGFSAASSSSK--LRLPPAAAAMVSYSQQNQQLEQA 124

Query: 128 AVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPEISHRVAFSTAAKNWAHFPRIHFGL 166
              RPPEKRQRVPSAYN+FIKEEI+RIKANNP+ISHR AFSTAAKNWAH+P IHFGL
Sbjct: 125 LHARPPEKRQRVPSAYNRFIKEEIRRIKANNPDISHREAFSTAAKNWAHYPNIHFGL 177

[Close]

BLAST of Sed0016201 vs. ExPASy Swiss-Prot
Match: A2X7Q3 (Protein YABBY 4 OS=Oryza sativa subsp. indica OX=39946 GN=YAB4 PE=3 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.1e-39
Identity = 99/215 (46.05%), Postives = 122/215 (56.74%), Query Frame = 0


Query: 11  EQLCYIPCNFCNIVLAVSVPCNSLFDIVTVRCGHCTNLWSVNM----------AAAFQ-- 70
           EQLCY+ CN C+ +LAV VPC+SLF  VTVRCGHC NL SVN+          A A Q  
Sbjct: 23  EQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPAPAPAPANQLH 82

Query: 71  -------------SLSWQDVQVPNYHLYTSSGPDFQADFG-SSSKCNNNKMEIRAPTTIA 130
                         L     Q P+  +  ++     +  G SSS C +N   ++ P    
Sbjct: 83  FGPSLLSPTSPHGLLDEVAFQTPSLLMEQAASASLSSITGRSSSSCASNAPAMQMPPAKP 142

Query: 131 AEQR---------AVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPEISHRVAFSTAAKNW 189
            +Q          + NRPPEKRQRVPSAYN+FIK+EIQRIKA NP+ISHR AFS AAKNW
Sbjct: 143 VQQEPELPKNAPASANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNW 202

[Close]

BLAST of Sed0016201 vs. ExPASy TrEMBL
Match: A0A6J1F4T3 (axial regulator YABBY 5-like OS=Cucurbita moschata OX=3662 GN=LOC111440865 PE=3 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 2.1e-95
Identity = 173/189 (91.53%), Postives = 180/189 (95.24%), Query Frame = 0


Query: 3   SSCIDIAPEQLCYIPCNFCNIVLAVSVPCNSLFDIVTVRCGHCTNLWSVNMAAAFQSLSW 62
           SSCIDIAPEQLCYIPCNFCNIVLAVSVPC+SLFDIVTVRCGHCTNLWSVNMAAAFQSLSW
Sbjct: 2   SSCIDIAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLSW 61

Query: 63  QDVQVPNYHLYTSSGPDFQADFGSSSKCNNNKMEIRAPTTIAAEQRAVNRPPEKRQRVPS 122
           QDVQVPNY+LYTSSGPDFQ DFGSSSKC+NNKM+IR   TIAAE+R VNRPPEKRQRVPS
Sbjct: 62  QDVQVPNYNLYTSSGPDFQGDFGSSSKCDNNKMQIRDSATIAAEERVVNRPPEKRQRVPS 121

Query: 123 AYNQFIKEEIQRIKANNPEISHRVAFSTAAKNWAHFPRIHFGLMLETNNQVKLDDGSERL 182
           AYNQFIKEEI+RIKA NPEISHR AFSTAAKNWAHFPRIHFGLM ETNNQVK+DDGSERL
Sbjct: 122 AYNQFIKEEIRRIKAKNPEISHREAFSTAAKNWAHFPRIHFGLMFETNNQVKIDDGSERL 181

Query: 183 MSRAALLNK 192
           MS AALLNK
Sbjct: 182 MSMAALLNK 190

[Close]

BLAST of Sed0016201 vs. ExPASy TrEMBL
Match: A0A6J1KTI6 (axial regulator YABBY 5-like OS=Cucurbita maxima OX=3661 GN=LOC111497478 PE=3 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 3.6e-95
Identity = 175/190 (92.11%), Postives = 180/190 (94.74%), Query Frame = 0


Query: 3   SSCIDIAPEQLCYIPCNFCNIVLAVSVPCNSLFDIVTVRCGHCTNLWSVNMAAAFQSLSW 62
           SSCIDIAPEQLCYIPCNFCNIVLAVSVPC+SLFDIVTVRCGHCTNLWSVNMAAAFQSLSW
Sbjct: 2   SSCIDIAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLSW 61

Query: 63  QDVQVPNYHLYTSSGPDFQADFGSSSKC-NNNKMEIRAPTTIAAEQRAVNRPPEKRQRVP 122
           QDVQVPNY+LYTSSGPDFQ DFGSSSKC NNNKM+IR  TTIAAE+R VNRPPEKRQRVP
Sbjct: 62  QDVQVPNYNLYTSSGPDFQGDFGSSSKCDNNNKMQIRDSTTIAAEERVVNRPPEKRQRVP 121

Query: 123 SAYNQFIKEEIQRIKANNPEISHRVAFSTAAKNWAHFPRIHFGLMLETNNQVKLDDGSER 182
           SAYNQFIKEEIQRIKA NPEISHR AFSTAAKNWAHFPRIHFGLM ETNNQ K+DDGSER
Sbjct: 122 SAYNQFIKEEIQRIKAKNPEISHREAFSTAAKNWAHFPRIHFGLMFETNNQAKIDDGSER 181

Query: 183 LMSRAALLNK 192
           LMS AALLNK
Sbjct: 182 LMSMAALLNK 191

[Close]

BLAST of Sed0016201 vs. ExPASy TrEMBL
Match: A0A6J1CSS6 (axial regulator YABBY 5-like OS=Momordica charantia OX=3673 GN=LOC111014425 PE=3 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 1.5e-93
Identity = 174/190 (91.58%), Postives = 180/190 (94.74%), Query Frame = 0


Query: 3   SSCIDIAPEQLCYIPCNFCNIVLAVSVPCNSLFDIVTVRCGHCTNLWSVNMAAAFQSLSW 62
           +SCIDIAPEQLCYIPCNFCNIVLAVSVPC+SLFDIVTVRCGHCTNLWSVNMAAAFQSLSW
Sbjct: 2   ASCIDIAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLSW 61

Query: 63  QDVQVPNYHLYTSSGPDFQADFGSSSKCNNNKMEIRAPTTIAAEQRAVNRPPEKRQRVPS 122
           QDVQVPNY+LY+ SGPDFQ DFGSSSKCNNNKMEIRAPTTI AE+R VNRPPEKRQRVPS
Sbjct: 62  QDVQVPNYNLYSCSGPDFQGDFGSSSKCNNNKMEIRAPTTIPAEERVVNRPPEKRQRVPS 121

Query: 123 AYNQFIKEEIQRIKANNPEISHRVAFSTAAKNWAHFPRIHFGLMLET-NNQVKLDDGSER 182
           AYNQFIKEEIQRIKANNPEISHR AFSTAAKNWAHFPRIHFGLMLET NNQVKLDDG   
Sbjct: 122 AYNQFIKEEIQRIKANNPEISHREAFSTAAKNWAHFPRIHFGLMLETNNNQVKLDDG--- 181

Query: 183 LMSRAALLNK 192
            +SRAALLNK
Sbjct: 182 -LSRAALLNK 187

[Close]

BLAST of Sed0016201 vs. ExPASy TrEMBL
Match: D7TC40 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_11s0016g05590 PE=3 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 5.0e-81
Identity = 155/190 (81.58%), Postives = 168/190 (88.42%), Query Frame = 0


Query: 3   SSCIDIAPEQLCYIPCNFCNIVLAVSVPCNSLFDIVTVRCGHCTNLWSVNMAAAFQSLSW 62
           SSCID+A EQLCYIPCNFCNIVLAVSVPC+SLFDIVTVRCGHCTNLWSVNMAAAFQSLSW
Sbjct: 2   SSCIDVASEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLSW 61

Query: 63  QDVQVPNYHLYTSSGPDFQADFGSSSKCNNNKMEIRAPTTIAAEQRAVNRPPEKRQRVPS 122
           QDVQ PNY     + PD++ D GSSSKC N KM +RAP +  +E+R VNRPPEKRQRVPS
Sbjct: 62  QDVQAPNY-----TSPDYRIDLGSSSKC-NTKMAMRAPASNISEERIVNRPPEKRQRVPS 121

Query: 123 AYNQFIKEEIQRIKANNPEISHRVAFSTAAKNWAHFPRIHFGLMLETNNQVKLDDGSER- 182
           AYNQFIKEEIQRIKANNP+ISHR AFSTAAKNWAHFP IHFGLMLETNNQ KLD+GSE+ 
Sbjct: 122 AYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLETNNQPKLDEGSEKH 181

Query: 183 LMSRAALLNK 192
           LMS+AAL NK
Sbjct: 182 LMSKAALRNK 185

[Close]

BLAST of Sed0016201 vs. ExPASy TrEMBL
Match: A0A6P5XRM3 (axial regulator YABBY 5-like OS=Durio zibethinus OX=66656 GN=LOC111285610 PE=3 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.5e-80
Identity = 153/190 (80.53%), Postives = 164/190 (86.32%), Query Frame = 0


Query: 3   SSCIDIAPEQLCYIPCNFCNIVLAVSVPCNSLFDIVTVRCGHCTNLWSVNMAAAFQSLSW 62
           SSCID+ PEQLCYIPCNFCNIVLAVSVPC+SLFDIVTVRCGHCTNLWSVNMAAAFQSLSW
Sbjct: 2   SSCIDVGPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLSW 61

Query: 63  QDVQVPNYHLYTSSGPDFQADFGSSSKCNNNKMEIRAPTTIAAEQRAVNRPPEKRQRVPS 122
           QD Q PNY     +  D++ D GSSS+C NNK  +RAP     E+R VNRPPEKRQRVPS
Sbjct: 62  QDAQAPNY-----ATQDYRTDLGSSSRC-NNKFSMRAPVNNVTEERVVNRPPEKRQRVPS 121

Query: 123 AYNQFIKEEIQRIKANNPEISHRVAFSTAAKNWAHFPRIHFGLMLETNNQVKLDDGSER- 182
           AYNQFIKEEIQRIKANNPEISHR AFSTAAKNWAHFP IHFGLMLE+NNQ KLDDGSE+ 
Sbjct: 122 AYNQFIKEEIQRIKANNPEISHREAFSTAAKNWAHFPHIHFGLMLESNNQTKLDDGSEKH 181

Query: 183 LMSRAALLNK 192
           L+SR ALLNK
Sbjct: 182 LVSRTALLNK 185

[Close]

BLAST of Sed0016201 vs. TAIR 10
Match: AT2G26580.1 (plant-specific transcription factor YABBY family protein )

HSP 1 Score: 238.0 bits (606), Expect = 6.1e-63
Identity = 120/168 (71.43%), Postives = 135/168 (80.36%), Query Frame = 0


Query: 8   IAPEQLCYIPCNFCNIVLAVSVPCNSLFDIVTVRCGHCTNLWSVNMAAAFQSLSWQDVQV 67
           +A EQLCYIPCNFCNI+LAV+VPC+SLFDIVTVRCGHCTNLWSVNMAAA QSLS  + Q 
Sbjct: 6   MATEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSLSRPNFQA 65

Query: 68  PNYHLYTSSGPDFQADFGSSSKCNNNKMEIRAPTTIAAEQRAVNRPPEKRQRVPSAYNQF 127
            NY +          ++GSSS+ ++ K+  R  T    EQR VNRPPEKRQRVPSAYNQF
Sbjct: 66  TNYAV---------PEYGSSSR-SHTKIPSRISTRTITEQRIVNRPPEKRQRVPSAYNQF 125

Query: 128 IKEEIQRIKANNPEISHRVAFSTAAKNWAHFPRIHFGLMLETNNQVKL 176
           IKEEIQRIKANNP+ISHR AFSTAAKNWAHFP IHFGLMLE+N Q K+
Sbjct: 126 IKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLESNKQAKI 163

[Close]

BLAST of Sed0016201 vs. TAIR 10
Match: AT2G26580.2 (plant-specific transcription factor YABBY family protein )

HSP 1 Score: 238.0 bits (606), Expect = 6.1e-63
Identity = 120/168 (71.43%), Postives = 135/168 (80.36%), Query Frame = 0


Query: 8   IAPEQLCYIPCNFCNIVLAVSVPCNSLFDIVTVRCGHCTNLWSVNMAAAFQSLSWQDVQV 67
           +A EQLCYIPCNFCNI+LAV+VPC+SLFDIVTVRCGHCTNLWSVNMAAA QSLS  + Q 
Sbjct: 6   MATEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSLSRPNFQA 65

Query: 68  PNYHLYTSSGPDFQADFGSSSKCNNNKMEIRAPTTIAAEQRAVNRPPEKRQRVPSAYNQF 127
            NY +          ++GSSS+ ++ K+  R  T    EQR VNRPPEKRQRVPSAYNQF
Sbjct: 66  TNYAV---------PEYGSSSR-SHTKIPSRISTRTITEQRIVNRPPEKRQRVPSAYNQF 125

Query: 128 IKEEIQRIKANNPEISHRVAFSTAAKNWAHFPRIHFGLMLETNNQVKL 176
           IKEEIQRIKANNP+ISHR AFSTAAKNWAHFP IHFGLMLE+N Q K+
Sbjct: 126 IKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLESNKQAKI 163

[Close]

BLAST of Sed0016201 vs. TAIR 10
Match: AT1G08465.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 172.2 bits (435), Expect = 4.1e-43
Identity = 97/178 (54.49%), Postives = 117/178 (65.73%), Query Frame = 0


Query: 6   IDIAPEQLCYIPCNFCNIVLAVSVPCNSLFDIVTVRCGHCTNLWSVNMAAAFQSLS---- 65
           +D + E++CY+ C+FC  +LAVSVP  SLF +VTVRCGHCTNL S+N+  +    S    
Sbjct: 3   VDFSSERVCYVHCSFCTTILAVSVPYASLFTLVTVRCGHCTNLLSLNIGVSLHQTSAPPI 62

Query: 66  WQDVQVPNYHLYTSSGPDFQADFGSSSKCNNNKMEIRAPTTIAAEQRAVNRPPEKRQRVP 125
            QD+Q    H   ++    + D  SSS+  NN  E        A +    RPPEKRQRVP
Sbjct: 63  HQDLQPHRQH---TTSLVTRKDCASSSRSTNNLSE---NIDREAPRMPPIRPPEKRQRVP 122

Query: 126 SAYNQFIKEEIQRIKANNPEISHRVAFSTAAKNWAHFPRIHFGLMLETNNQVKLDDGS 180
           SAYN+FIKEEIQRIKA NPEISHR AFSTAAKNWAHFP IHFGL L+ N + K  D S
Sbjct: 123 SAYNRFIKEEIQRIKACNPEISHREAFSTAAKNWAHFPHIHFGLKLDGNKKGKQLDQS 174

[Close]

BLAST of Sed0016201 vs. TAIR 10
Match: AT2G45190.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 152.1 bits (383), Expect = 4.4e-37
Identity = 91/176 (51.70%), Postives = 106/176 (60.23%), Query Frame = 0


Query: 11  EQLCYIPCNFCNIVLAVSVPCNSLFDIVTVRCGHCTNLWSVNMAAAFQSLSWQDVQVPNY 70
           + LCY+ CNFC  +LAV+VP  SLF  VTVRCG CTNL SVNM +     S Q       
Sbjct: 23  DHLCYVQCNFCQTILAVNVPYTSLFKTVTVRCGCCTNLLSVNMRSYVLPASNQLQLQLGP 82

Query: 71  HLYTSSGPDFQADFGSSSKCNNNKMEIR-----APTTIAAEQR-------AVNRPPEKRQ 130
           H Y +     +    + S  N   M         P+ +   Q+        VNRPPEKRQ
Sbjct: 83  HSYFNPQDILEELRDAPSNMNMMMMNQHPTMNDIPSFMDLHQQHEIPKAPPVNRPPEKRQ 142

Query: 131 RVPSAYNQFIKEEIQRIKANNPEISHRVAFSTAAKNWAHFPRIHFGLMLETNNQVK 175
           RVPSAYN+FIKEEIQRIKA NP+ISHR AFS AAKNWAHFP IHFGL+ + N  VK
Sbjct: 143 RVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLVPD-NQPVK 197

[Close]

BLAST of Sed0016201 vs. TAIR 10
Match: AT4G00180.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 147.5 bits (371), Expect = 1.1e-35
Identity = 90/205 (43.90%), Postives = 111/205 (54.15%), Query Frame = 0


Query: 11  EQLCYIPCNFCNIVLAVSVPCNSLFDIVTVRCGHCTNLWSVNMAAAFQSLSWQDVQVPNY 70
           +QLCY+ C+FC+ VLAVSVP +SLF  VTVRCGHC+NL SV +  + ++L    V    +
Sbjct: 23  DQLCYVHCSFCDTVLAVSVPPSSLFKTVTVRCGHCSNLLSVTV--SMRALLLPSVSNLGH 82

Query: 71  HLYTSSGPD-----FQADFGSSSKCNNNKMEIRAPTTIAAEQRAV--------------- 130
                  P       +         N N M     +     +  V               
Sbjct: 83  SFLPPPPPPPPPNLLEEMRSGGQNINMNMMMSHHASAHHPNEHLVMATRNGRSVDHLQEM 142

Query: 131 ------NRPPEKRQRVPSAYNQFIKEEIQRIKANNPEISHRVAFSTAAKNWAHFPRIHFG 186
                 NRPPEKRQRVPSAYN+FIKEEIQRIKA NP+ISHR AFS AAKNWAHFP IHFG
Sbjct: 143 PRPPPANRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFG 202

The following BLAST results are available for this feature:

BLAST of Sed0016201 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022933458.1	4.3e-95	91.53	axial regulator YABBY 5-like [Cucurbita moschata] >XP_023529551.1 axial regulato...	[more]
XP_023004055.1	7.4e-95	92.11	axial regulator YABBY 5-like [Cucurbita maxima]	[more]
KAG6587892.1	1.6e-94	91.01	Axial regulator YABBY 5, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022144840.1	3.1e-93	91.58	axial regulator YABBY 5-like [Momordica charantia]	[more]
XP_004150030.1	5.3e-93	88.60	axial regulator YABBY 5-like [Cucumis sativus] >KAE8653111.1 hypothetical protei...	[more]

BLAST of Sed0016201 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GW46	8.6e-62	71.43	Axial regulator YABBY 5 OS=Arabidopsis thaliana OX=3702 GN=YAB5 PE=1 SV=1	[more]
Q10FZ7	1.6e-44	56.21	Protein YABBY 2 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB2 PE=2 SV=1	[more]
Q9XFB0	5.8e-42	54.49	Putative axial regulator YABBY 2 OS=Arabidopsis thaliana OX=3702 GN=YAB2 PE=1 SV...	[more]
Q2QM17	2.2e-41	55.37	Protein YABBY 6 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB6 PE=2 SV=1	[more]
A2X7Q3	2.1e-39	46.05	Protein YABBY 4 OS=Oryza sativa subsp. indica OX=39946 GN=YAB4 PE=3 SV=1	[more]

BLAST of Sed0016201 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F4T3	2.1e-95	91.53	axial regulator YABBY 5-like OS=Cucurbita moschata OX=3662 GN=LOC111440865 PE=3 ...	[more]
A0A6J1KTI6	3.6e-95	92.11	axial regulator YABBY 5-like OS=Cucurbita maxima OX=3661 GN=LOC111497478 PE=3 SV...	[more]
A0A6J1CSS6	1.5e-93	91.58	axial regulator YABBY 5-like OS=Momordica charantia OX=3673 GN=LOC111014425 PE=3...	[more]
D7TC40	5.0e-81	81.58	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_11s0016g05590 PE=3 SV=...	[more]
A0A6P5XRM3	1.5e-80	80.53	axial regulator YABBY 5-like OS=Durio zibethinus OX=66656 GN=LOC111285610 PE=3 S...	[more]

BLAST of Sed0016201 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G26580.1	6.1e-63	71.43	plant-specific transcription factor YABBY family protein	[more]
AT2G26580.2	6.1e-63	71.43	plant-specific transcription factor YABBY family protein	[more]
AT1G08465.1	4.1e-43	54.49	Plant-specific transcription factor YABBY family protein	[more]
AT2G45190.1	4.4e-37	51.70	Plant-specific transcription factor YABBY family protein	[more]
AT4G00180.1	1.1e-35	43.90	Plant-specific transcription factor YABBY family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006780	YABBY protein	PFAM	PF04690	YABBY	coord: 10..150 e-value: 1.2E-60 score: 204.9
IPR006780	YABBY protein	PANTHER	PTHR31675	PROTEIN YABBY 6-RELATED	coord: 3..167
IPR036910	High mobility group box domain superfamily	GENE3D	1.10.30.10	High mobility group box domain	coord: 88..145 e-value: 1.2E-5 score: 27.5
IPR036910	High mobility group box domain superfamily	SUPERFAMILY	47095	HMG-box	coord: 92..143
None	No IPR available	PANTHER	PTHR31675:SF6	AXIAL REGULATOR YABBY 5	coord: 3..167

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0016201.1	Sed0016201.1	mRNA
Sed0016201.2	Sed0016201.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010158	abaxial cell fate specification
biological_process	GO:0009944	polarity specification of adaxial/abaxial axis
biological_process	GO:2000024	regulation of leaf development
biological_process	GO:1902183	regulation of shoot apical meristem development
biological_process	GO:0007275	multicellular organism development
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000976	transcription cis-regulatory region binding