Sed0015021 (gene) Chayote v1

Overview


Name	Sed0015021
Type	gene
Organism	Sechium edule (Chayote v1)
Description	DUF4413 domain-containing protein
Location	LG10: 27722877 .. 27725229 (-)
RNA-Seq Expression	Sed0015021
Synteny	Sed0015021

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCGCTAAGTTCGAAAAATATTGGAGTGTGATACATGGTGTTTTGGCCATAGCAACCATTTTAGATCCTAGGTTTAAGATGAGACTGATTGAATTTTATTTTCCTAAAATCTACAGATCACATTATAGTATTGAAATTCAACGTGTTAAAGATTTGTGCAAAGATTTGATAAAGTATTATAGTTCAAATTCTAATAATGAAGCAGAATCTTCATGTTCTTTGATGGAGGTGAATTGTTCGAGTTCGAGACCTAGCGAGAGAAAAATCGATTTCTCGAGTTTGATGAGTTTATTAATAATGTTGCAAGTGTTGATAATGTCAAATCCGAGTTAGATATTTATTTAGAGGAAAGTCTTTTGCCAAGAAGTGATGACTTTGACATTTTGTCTTGGTGGAAGTTAAATGGGATAAAGTATCCTATTTTATATGAAATTGCCAAAGATATTTTAGCAGTTCCGGTTACTACGGTTGCTTCAGAGTCTGCATTTAGTATTGGAGGTAGACATGTAAGTCCACATCGATCTCAAATTCATGCTACATTATTGGAAGCTTTGATGTGTACTCAAGATTGGTTATGGACTGAAGGTATAGATAATGTTTTTTTTTATTCTTACTATTTATCAAAGAATTTTTTTTTATATATTATTTAATTTTTATTTTTATTTGTGCTTTCATCACTAGATAAATCTACTTCAATAGATGTCAAAGTATTGGAGACTGTTCTCCAAGACCAGGATTTAGATGATGAGGTAAGTAATTTCTATAAGTTTGTGTGTTCTAAGTAGCCCTTTTAATTATTAATTTATAGTAATTCTTTTCAATCTATTTTTTTCTAGCAATTAAGTGCTACAAACATTGACAACCGAAGAATGTGGACATAAGTTGAGTTCAAAATTATGCTAAATTAGACATTTTGTTGTTGTAATATTTAGATTATTTTATGATTTTGTTGAAGTTTTTTTTGGTTGAGTAATAATTTGTTGAAGTTTATTTTGTTGAGGACTAATTTGTTGAAGTTCATTTTGTTAAAGACTATTTTGTTGAAGTTGATTTTGTTGAAAGTTGAAACTATGTTTAAATATTCGTGAAATATGTCAATGTGAATTTAGATATGTTCGGAAATAGAATACATATATTTTATTTATAATCCAAATAAAGAGAAAAAAAATGATCAAACTATCTAAATACATACAAATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTAAAAAGGTGAAAATTCCTCAGGGGAAAAAATCCTCGCGGTGAACCCGATCCCCGCCTATTCCCCGCGGGGATTCCCCGTCCCCATCCCAGCAAAAAAAATGGTGAATTTTGCGGGGACGAGGAGGTCATTCCCTGGCCCCACCCCGCCCCGTGGACATCTCTAATGGTACCAAGCTAGAATAATTTAGTTTAATAAATGCCCAAATTAATTCACCAATCTAAGCTATAATAATGCAAGCAAACTTTGAAATGCCCAAATTTGAAGTTCTTAAGTTAACTTTAAAACAAATGCCCAAATGAAACAAATGCACAAACTACAAAAAATACAAATACACAAATAAGAAATAATTGTACAAATTTGAACCAATAGTTAAATATGTAAAGATTACAACATAAATTTGGGAAGAAATTAGTTCATAAGAGCCTAAAAAAAGTTAGGGACTAAGAAATTACCCGAAATCGTGAAGAAATAATGCATAAAGTTGGAAAATGCCCAAAACCAAGCAGCAGCGGAGAGGGAGAAATGAAAAAACAAAGTAATGTCGAAGAAATGGTGGAGGCAGAGAGGATTTGTGGAAGAACTAAGTAGCGGAGGTGGGAGGGTTTTTTTTTTTTTTTTTGTCGAAGAGGGTTTCTAGTGATGGAAATGAGGAAATGTGAGAGAGATGAATGAAGAAATACAACACGGCACTATTGGTGGTGGGCAATGCCCGCCATCGAAAGTATATAAAAAGCAATTTTTGGTGGCAGGCATGGCCCGTCACCGATAATAATAAAGGGTTGCAGCATTAGATGGCGGGCACGGACCGCCATTGTTAATTCAACATCATTTTCCTTCCGCGTTTTTGAATACTACTTGTTTTAGCCCGCCACCTATTCGTATAATTCTACTAGTGAAGCAAACGTTGGATAAAATATTGATAATTTATTTTATATGTCATCTATTGTATATATGTGATAATAGATTAGTGTCATCAAAGATGAATTAATGATTGTTGAAAAACATCATCTCAAGAATTTCAATGACACTTTTTAAGTAGTGTCATTTAAAGAGTATAGATGATGTGCGATACAATGATTGTAGAAAAGTATCATCTAAAGAGTTTCAATAA

mRNA sequence

ATGATCGCTAAGTTCGAAAAATATTGGAGTGTGATACATGGTGTTTTGGCCATAGCAACCATTTTAGATCCTAGGTTTAAGATGAGACTGATTGAATTTTATTTTCCTAAAATCTACAGATCACATTATAGTATTGAAATTCAACGTGTTAAAGATTTGTGCAAAGATTTGATAAAGTATTATAGTTCAAATTCTAATAATGAAGCAGAATCTTCATGTTCTTTGATGGAGGTGAATTGTTCGAGTTCGAGACCTAGCGAGAGAAAAATCGATTTCTCGAATAAATCTACTTCAATAGATGTCAAAGTATTGGAGACTGTTCTCCAAGACCAGGATTTAGATGATGAGAGTATAGATGATGTGCGATACAATGATTGTAGAAAAGTATCATCTAAAGAGTTTCAATAA

Coding sequence (CDS)

ATGATCGCTAAGTTCGAAAAATATTGGAGTGTGATACATGGTGTTTTGGCCATAGCAACCATTTTAGATCCTAGGTTTAAGATGAGACTGATTGAATTTTATTTTCCTAAAATCTACAGATCACATTATAGTATTGAAATTCAACGTGTTAAAGATTTGTGCAAAGATTTGATAAAGTATTATAGTTCAAATTCTAATAATGAAGCAGAATCTTCATGTTCTTTGATGGAGGTGAATTGTTCGAGTTCGAGACCTAGCGAGAGAAAAATCGATTTCTCGAATAAATCTACTTCAATAGATGTCAAAGTATTGGAGACTGTTCTCCAAGACCAGGATTTAGATGATGAGAGTATAGATGATGTGCGATACAATGATTGTAGAAAAGTATCATCTAAAGAGTTTCAATAA

Protein sequence

MIAKFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIEIQRVKDLCKDLIKYYSSNSNNEAESSCSLMEVNCSSSRPSERKIDFSNKSTSIDVKVLETVLQDQDLDDESIDDVRYNDCRKVSSKEFQ

Homology

[Close]

BLAST of Sed0015021 vs. NCBI nr
Match: KGN44253.1 (hypothetical protein Csa_016011 [Cucumis sativus])

HSP 1 Score: 122.5 bits (306), Expect = 2.8e-24
Identity = 67/124 (54.03%), Postives = 86/124 (69.35%), Query Frame = 0


Query: 4   KFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIEIQRVKDLCKDLIKYYSS 63
           ++EKYWSVIHGVLAIAT+LDPRFKMRLIEFYF +IY SHY +EI+RV++LC DL+K YSS
Sbjct: 6   RYEKYWSVIHGVLAIATVLDPRFKMRLIEFYFRQIYGSHYIVEIERVRELCCDLMKVYSS 65

Query: 64  NSNNEAESSCSLMEVNCSSSRPSERKIDFSNKSTSIDVKVLETVLQDQDLDDE-----SI 123
            S+   E   +    + S    S  K   +NK T +D KVLE V  DQD+DD+      +
Sbjct: 66  KSSIIEEPPST--SYSTSKRDGSSSKTSLANKHTPMDAKVLENVFHDQDIDDDEPFPTKL 125

[Close]

BLAST of Sed0015021 vs. NCBI nr
Match: XP_038884881.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Benincasa hispida])

HSP 1 Score: 114.0 bits (284), Expect = 1.0e-21
Identity = 53/70 (75.71%), Postives = 63/70 (90.00%), Query Frame = 0


Query: 1   MIAKFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIEIQRVKDLCKDLIKY 60
           MIAKFEKYWSVIHGVLAIAT+LDPRFKMRLI+FYFP+IY  H+++EI+RV+DLC DL+K+
Sbjct: 200 MIAKFEKYWSVIHGVLAIATVLDPRFKMRLIQFYFPQIYGFHHTVEIKRVRDLCCDLMKF 259

Query: 61  YSSNSNNEAE 71
           YSSNS    E
Sbjct: 260 YSSNSRTIEE 269

[Close]

BLAST of Sed0015021 vs. NCBI nr
Match: TYK23151.1 (zinc finger BED domain-containing protein DAYSLEEPER-like [Cucumis melo var. makuwa])

HSP 1 Score: 102.8 bits (255), Expect = 2.3e-18
Identity = 66/133 (49.62%), Postives = 82/133 (61.65%), Query Frame = 0


Query: 1   MIAKFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIEIQRVKDLCKDLIKY 60
           MI+KFEKYWSVIH  LAIAT LDP+FKMRLIEFYFP+IY SHY  EI+RV++LC DL+ +
Sbjct: 5   MISKFEKYWSVIHSALAIATALDPKFKMRLIEFYFPQIYESHYVAEIKRVRELCCDLMTF 64

Query: 61  YSSNSNNEAESSCSLMEVNCSSSRP-SERKIDFSNKSTSIDVKVLETVLQDQDLDDESID 120
           YSS S        ++ E   S+S P S  K D S+  TS+  +      +D+ L  E   
Sbjct: 65  YSSKSR-------TIEEPQRSTSTPYSTSKRDGSSSKTSLVNR------KDRHLKFEKFV 124

Query: 121 DVRYNDCRKVSSK 133
               ND   V SK
Sbjct: 125 SNVENDVNNVKSK 124

[Close]

BLAST of Sed0015021 vs. NCBI nr
Match: XP_030494740.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Cannabis sativa])

HSP 1 Score: 95.9 bits (237), Expect = 2.8e-16
Identity = 42/68 (61.76%), Postives = 54/68 (79.41%), Query Frame = 0


Query: 1   MIAKFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIEIQRVKDLCKDLIKY 60
           M+ KFE+YW+ IHG+LAIAT+LDPRFKM+LIE+YFPKIY   Y  E++R++ LC DL+K 
Sbjct: 210 MMDKFEQYWTSIHGILAIATVLDPRFKMKLIEYYFPKIYVGEYQNEVKRIRMLCYDLVKE 269

Query: 61  YSSNSNNE 69
           Y SN   E
Sbjct: 270 YKSNDGKE 277

[Close]

BLAST of Sed0015021 vs. NCBI nr
Match: XP_030505226.1 (zinc finger BED domain-containing protein RICESLEEPER 2 [Cannabis sativa])

HSP 1 Score: 95.9 bits (237), Expect = 2.8e-16
Identity = 42/68 (61.76%), Postives = 54/68 (79.41%), Query Frame = 0


Query: 1   MIAKFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIEIQRVKDLCKDLIKY 60
           M+ KFE+YW+ IHG+LAIAT+LDPRFKM+LIE+YFPKIY   Y  E++R++ LC DL+K 
Sbjct: 419 MMDKFEQYWTSIHGILAIATVLDPRFKMKLIEYYFPKIYVGEYQNEVKRIRMLCYDLVKE 478

Query: 61  YSSNSNNE 69
           Y SN   E
Sbjct: 479 YKSNDGKE 486

[Close]

BLAST of Sed0015021 vs. ExPASy Swiss-Prot
Match: P08770 (Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2)

HSP 1 Score: 57.0 bits (136), Expect = 1.9e-07
Identity = 28/65 (43.08%), Postives = 38/65 (58.46%), Query Frame = 0


Query: 1   MIAKFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIEIQRVKDLCKDLIKY 60
           M  KFEKYW V +  LA+A  LDPR+K  LIEFY  K +   Y + +     + + L ++
Sbjct: 562 MSEKFEKYWKVSNIALAVACFLDPRYKKILIEFYMKKFHGDSYKVHVDDFVRVIRKLYQF 621

Query: 61  YSSNS 66
           YSS S
Sbjct: 622 YSSCS 626

[Close]

BLAST of Sed0015021 vs. ExPASy Swiss-Prot
Match: P03010 (Putative AC9 transposase OS=Zea mays OX=4577 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.9e-07
Identity = 28/65 (43.08%), Postives = 38/65 (58.46%), Query Frame = 0


Query: 1   MIAKFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIEIQRVKDLCKDLIKY 60
           M  KFEKYW V +  LA+A  LDPR+K  LIEFY  K +   Y + +     + + L ++
Sbjct: 531 MSEKFEKYWKVSNIALAVACFLDPRYKKILIEFYMKKFHGDSYKVHVDDFVRVIRKLYQF 590

Query: 61  YSSNS 66
           YSS S
Sbjct: 591 YSSCS 595

[Close]

BLAST of Sed0015021 vs. ExPASy Swiss-Prot
Match: Q6AVI0 (Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 4.3e-07
Identity = 27/61 (44.26%), Postives = 39/61 (63.93%), Query Frame = 0


Query: 1   MIAKFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIEIQRVKDLCKDLIKY 60
           M  +F+KYW   + VLAIA ++DPRFKM+L+EF + KIY    +  ++ V D   +L K 
Sbjct: 500 MHERFDKYWKDCNLVLAIAVVMDPRFKMKLVEFSYSKIYGVEAAKYVKVVDDAVHELYKE 559

Query: 61  Y 62
           Y
Sbjct: 560 Y 560

[Close]

BLAST of Sed0015021 vs. ExPASy Swiss-Prot
Match: B9FJG3 (Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0239150 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.6e-06
Identity = 26/61 (42.62%), Postives = 38/61 (62.30%), Query Frame = 0


Query: 1   MIAKFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIEIQRVKDLCKDLIKY 60
           M  +F+KYW   + VLAIA ++DPRFKM+L+EF + KIY    +  ++ V D   +L   
Sbjct: 500 MHERFDKYWKDCNLVLAIAVVMDPRFKMKLVEFSYSKIYGVEAAKYVKVVDDAVHELYNE 559

Query: 61  Y 62
           Y
Sbjct: 560 Y 560

[Close]

BLAST of Sed0015021 vs. ExPASy Swiss-Prot
Match: Q0JMB2 (Zinc finger BED domain-containing protein RICESLEEPER 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0518400 PE=2 SV=3)

HSP 1 Score: 53.5 bits (127), Expect = 2.1e-06
Identity = 27/61 (44.26%), Postives = 40/61 (65.57%), Query Frame = 0


Query: 4   KFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIE-IQRVKDLCKDLIKYYS 63
           KF+KYW   + VLAIA  +DPRFKM+++EF + KIY    + + ++ V D   DL K Y+
Sbjct: 472 KFDKYWKDCNVVLAIAVAMDPRFKMKMVEFAYSKIYGPTDAAKYVKLVDDAILDLYKEYA 531

[Close]

BLAST of Sed0015021 vs. ExPASy TrEMBL
Match: A0A0A0K403 (DUF4413 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G235230 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.4e-24
Identity = 67/124 (54.03%), Postives = 86/124 (69.35%), Query Frame = 0


Query: 4   KFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIEIQRVKDLCKDLIKYYSS 63
           ++EKYWSVIHGVLAIAT+LDPRFKMRLIEFYF +IY SHY +EI+RV++LC DL+K YSS
Sbjct: 6   RYEKYWSVIHGVLAIATVLDPRFKMRLIEFYFRQIYGSHYIVEIERVRELCCDLMKVYSS 65

Query: 64  NSNNEAESSCSLMEVNCSSSRPSERKIDFSNKSTSIDVKVLETVLQDQDLDDE-----SI 123
            S+   E   +    + S    S  K   +NK T +D KVLE V  DQD+DD+      +
Sbjct: 66  KSSIIEEPPST--SYSTSKRDGSSSKTSLANKHTPMDAKVLENVFHDQDIDDDEPFPTKL 125

[Close]

BLAST of Sed0015021 vs. ExPASy TrEMBL
Match: A0A5D3DHK7 (Zinc finger BED domain-containing protein DAYSLEEPER-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G001630 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.1e-18
Identity = 66/133 (49.62%), Postives = 82/133 (61.65%), Query Frame = 0


Query: 1   MIAKFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIEIQRVKDLCKDLIKY 60
           MI+KFEKYWSVIH  LAIAT LDP+FKMRLIEFYFP+IY SHY  EI+RV++LC DL+ +
Sbjct: 5   MISKFEKYWSVIHSALAIATALDPKFKMRLIEFYFPQIYESHYVAEIKRVRELCCDLMTF 64

Query: 61  YSSNSNNEAESSCSLMEVNCSSSRP-SERKIDFSNKSTSIDVKVLETVLQDQDLDDESID 120
           YSS S        ++ E   S+S P S  K D S+  TS+  +      +D+ L  E   
Sbjct: 65  YSSKSR-------TIEEPQRSTSTPYSTSKRDGSSSKTSLVNR------KDRHLKFEKFV 124

Query: 121 DVRYNDCRKVSSK 133
               ND   V SK
Sbjct: 125 SNVENDVNNVKSK 124

[Close]

BLAST of Sed0015021 vs. ExPASy TrEMBL
Match: A0A803PTU2 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 8.9e-16
Identity = 40/68 (58.82%), Postives = 53/68 (77.94%), Query Frame = 0


Query: 1   MIAKFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIEIQRVKDLCKDLIKY 60
           M+ KFE+YW+ IHG+LAIAT+LDPRFKM+LIE+YFPK+Y   Y  E++R++ LC DL+K 
Sbjct: 299 MMDKFEQYWTSIHGILAIATVLDPRFKMKLIEYYFPKLYVGDYQNEVERIRMLCYDLVKE 358

Query: 61  YSSNSNNE 69
           Y  N   E
Sbjct: 359 YKPNDGKE 366

[Close]

BLAST of Sed0015021 vs. ExPASy TrEMBL
Match: A0A5C7HKE4 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_018687 PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 4.4e-15
Identity = 45/88 (51.14%), Postives = 63/88 (71.59%), Query Frame = 0


Query: 2   IAKFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIEIQRVKDLCKDLIKYY 61
           IAKFEKYW+VI+G++A+AT+LDPRFKM+++EFYFP IY  + S E+++V+ LC  L+K Y
Sbjct: 299 IAKFEKYWNVINGMMAVATVLDPRFKMKVLEFYFPHIYGDNSSFEMEKVRRLCYGLVKEY 358

Query: 62  SSNSNNEAESSCSLMEVNCSSSRPSERK 90
             NS    E  C  ++ +CS S  S  K
Sbjct: 359 QLNSKTGKE-PCDRIDSSCSPSSMSISK 385

[Close]

BLAST of Sed0015021 vs. ExPASy TrEMBL
Match: A0A803PQR9 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.7e-14
Identity = 39/64 (60.94%), Postives = 50/64 (78.12%), Query Frame = 0


Query: 1  MIAKFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIEIQRVKDLCKDLIKY 60
          M+ KFE+YW+ IHG+LAIAT+LD RFKM LIE+YFPKIY   Y  E++R++ LC DL+K 
Sbjct: 5  MMDKFEQYWTSIHGILAIATVLDTRFKMTLIEYYFPKIYVGEYQNEVERIRMLCYDLVKE 64

Query: 61 YSSN 65
          Y  N
Sbjct: 65 YKPN 68

[Close]

BLAST of Sed0015021 vs. TAIR 10
Match: AT3G42170.1 (BED zinc finger ;hAT family dimerisation domain )

HSP 1 Score: 50.4 bits (119), Expect = 1.3e-06
Identity = 26/61 (42.62%), Postives = 35/61 (57.38%), Query Frame = 0


Query: 1   MIAKFEKYWSVIHGVLAIATILDPRFKMRLIEFYFPKIYRSHYSIEIQRVKDLCKDLIKY 60
           M  K +KYW     VLA+A ++DPRFKM+L+EF F KI+       I+ V D   +L   
Sbjct: 495 MQEKVDKYWRDCSLVLAMAVVMDPRFKMKLVEFSFSKIFGEDAGKNIKTVDDGIHELFTE 554

Query: 61  Y 62
           Y
Sbjct: 555 Y 555

The following BLAST results are available for this feature:

BLAST of Sed0015021 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN44253.1	2.8e-24	54.03	hypothetical protein Csa_016011 [Cucumis sativus]	[more]
XP_038884881.1	1.0e-21	75.71	zinc finger BED domain-containing protein RICESLEEPER 2-like [Benincasa hispida]	[more]
TYK23151.1	2.3e-18	49.62	zinc finger BED domain-containing protein DAYSLEEPER-like [Cucumis melo var. mak...	[more]
XP_030494740.1	2.8e-16	61.76	zinc finger BED domain-containing protein RICESLEEPER 2-like [Cannabis sativa]	[more]
XP_030505226.1	2.8e-16	61.76	zinc finger BED domain-containing protein RICESLEEPER 2 [Cannabis sativa]	[more]

BLAST of Sed0015021 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P08770	1.9e-07	43.08	Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2	[more]
P03010	1.9e-07	43.08	Putative AC9 transposase OS=Zea mays OX=4577 PE=4 SV=1	[more]
Q6AVI0	4.3e-07	44.26	Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. j...	[more]
B9FJG3	1.6e-06	42.62	Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. j...	[more]
Q0JMB2	2.1e-06	44.26	Zinc finger BED domain-containing protein RICESLEEPER 4 OS=Oryza sativa subsp. j...	[more]

BLAST of Sed0015021 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K403	1.4e-24	54.03	DUF4413 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G235230 PE=...	[more]
A0A5D3DHK7	1.1e-18	49.62	Zinc finger BED domain-containing protein DAYSLEEPER-like OS=Cucumis melo var. m...	[more]
A0A803PTU2	8.9e-16	58.82	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A5C7HKE4	4.4e-15	51.14	Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_018687 PE=3 SV=1	[more]
A0A803PQR9	1.7e-14	60.94	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]

BLAST of Sed0015021 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G42170.1	1.3e-06	42.62	BED zinc finger ;hAT family dimerisation domain	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025525	hAT-like transposase, RNase-H fold	PFAM	PF14372	DUF4413	coord: 1..61 e-value: 5.6E-16 score: 58.6
None	No IPR available	PANTHER	PTHR23272:SF141	ZINC FINGER BED DOMAIN-CONTAINING PROTEIN RICESLEEPER 2-LIKE	coord: 1..120
None	No IPR available	PANTHER	PTHR23272	BED FINGER-RELATED	coord: 1..120
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 2..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0015021.1	Sed0015021.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006418	tRNA aminoacylation for protein translation
cellular_component	GO:0005622	intracellular anatomical structure
molecular_function	GO:0004812	aminoacyl-tRNA ligase activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0043167	ion binding
molecular_function	GO:0000166	nucleotide binding