Sed0014592 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGAAACAAAAGCACTAGATCGAGAAATCGAGAAGCAGACGGCGGATCGGAGAGAAATGGAGAAGGCGCTGAGAATATACGGCGAAGTTCTCCGGCTGGTGAAGCGGCTGCCGAAGGACTCCAGGCCTTACTACGCCAAGTACGCCCGAGAGAATTTCGTCAATTACAGAGAAATCGATGCCAACGACGCCAAATCCCTACAAGAACTCTTCCACAGAGCTTACGATCACTCCCTTTGGATTCTCAACAAGGTTCCGATCTAATCCTTTCAACTTTTCCGTTTCCAATTTGTATTCTATCGGATCCGTTTTGAGAGTTTCTGGTGATTGATTGGCAGTATTCGGTGGATGGATCTGCGGCGGATAAACTGAGGGAGATCTGTCATAGTTAGTGTGCGCTTTGTGTTTGCAATTTTCTTGAAATAATGCCTCTAAGGAATCGGCATCGGTTATTACACGTGAAACTCCGGCTGCCGCCGCCGTGGATTCTGATGAAGTCGTCGCCGGTACGATATTAGAGAATTGTTTATTTAAGAAGAAATACATTAGGTGAATTTATCTGTTCTTGGATCATCCTTTTATGTAAAATAAAGAAAATTTTCAGCCTGAATCGAATTTAAAACTTATCCAAGTTAATATTCTTTCAGTATCATTTTCTTCTTTC GGAAACAAAAGCACTAGATCGAGAAATCGAGAAGCAGACGGCGGATCGGAGAGAAATGGAGAAGGCGCTGAGAATATACGGCGAAGTTCTCCGGCTGGTGAAGCGGCTGCCGAAGGACTCCAGGCCTTACTACGCCAAGTACGCCCGAGAGAATTTCGTCAATTACAGAGAAATCGATGCCAACGACGCCAAATCCCTACAAGAACTCTTCCACAGAGCTTACGATCACTCCCTTTGGATTCTCAACAAGTATTCGGTGGATGGATCTGCGGCGGATAAACTGAGGGAGATCTGTCATAGTTAGTGTGCGCTTTGTGTTTGCAATTTTCTTGAAATAATGCCTCTAAGGAATCGGCATCGGTTATTACACGTGAAACTCCGGCTGCCGCCGCCGTGGATTCTGATGAAGTCGTCGCCGGTACGATATTAGAGAATTGTTTATTTAAGAAGAAATACATTAGGTGAATTTATCTGTTCTTGGATCATCCTTTTATGTAAAATAAAGAAAATTTTCAGCCTGAATCGAATTTAAAACTTATCCAAGTTAATATTCTTTCAGTATCATTTTCTTCTTTC ATGGAGAAGGCGCTGAGAATATACGGCGAAGTTCTCCGGCTGGTGAAGCGGCTGCCGAAGGACTCCAGGCCTTACTACGCCAAGTACGCCCGAGAGAATTTCGTCAATTACAGAGAAATCGATGCCAACGACGCCAAATCCCTACAAGAACTCTTCCACAGAGCTTACGATCACTCCCTTTGGATTCTCAACAAGTATTCGGTGGATGGATCTGCGGCGGATAAACTGAGGGAGATCTGTCATAGTTAG MEKALRIYGEVLRLVKRLPKDSRPYYAKYARENFVNYREIDANDAKSLQELFHRAYDHSLWILNKYSVDGSAADKLREICHS Homology
BLAST of Sed0014592 vs. NCBI nr
Match: XP_038898400.1 (LYR motif-containing protein At3g19508 [Benincasa hispida]) HSP 1 Score: 161.4 bits (407), Expect = 3.3e-36 Identity = 75/82 (91.46%), Postives = 81/82 (98.78%), Query Frame = 0
BLAST of Sed0014592 vs. NCBI nr
Match: XP_008456173.1 (PREDICTED: LYR motif-containing protein At3g19508 [Cucumis melo] >KAA0037191.1 LYR motif-containing protein [Cucumis melo var. makuwa] >TYK13881.1 LYR motif-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 160.6 bits (405), Expect = 5.7e-36 Identity = 73/82 (89.02%), Postives = 82/82 (100.00%), Query Frame = 0
BLAST of Sed0014592 vs. NCBI nr
Match: XP_022941949.1 (LYR motif-containing protein At3g19508 [Cucurbita moschata] >XP_023512988.1 LYR motif-containing protein At3g19508 [Cucurbita pepo subsp. pepo] >KAG6600304.1 LYR motif-containing protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030964.1 LYR motif-containing protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 156.4 bits (394), Expect = 1.1e-34 Identity = 72/82 (87.80%), Postives = 81/82 (98.78%), Query Frame = 0
BLAST of Sed0014592 vs. NCBI nr
Match: XP_022149201.1 (LYR motif-containing protein At3g19508 [Momordica charantia]) HSP 1 Score: 155.2 bits (391), Expect = 2.4e-34 Identity = 73/80 (91.25%), Postives = 78/80 (97.50%), Query Frame = 0
BLAST of Sed0014592 vs. NCBI nr
Match: XP_004140718.1 (LYR motif-containing protein At3g19508 [Cucumis sativus] >KGN57494.1 hypothetical protein Csa_011093 [Cucumis sativus]) HSP 1 Score: 153.7 bits (387), Expect = 7.0e-34 Identity = 69/81 (85.19%), Postives = 79/81 (97.53%), Query Frame = 0
BLAST of Sed0014592 vs. ExPASy Swiss-Prot
Match: Q1G3M2 (LYR motif-containing protein At3g19508 OS=Arabidopsis thaliana OX=3702 GN=At3g19508 PE=3 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 2.9e-27 Identity = 57/80 (71.25%), Postives = 68/80 (85.00%), Query Frame = 0
BLAST of Sed0014592 vs. ExPASy Swiss-Prot
Match: A9SNJ1 (LYR motif-containing protein PHYPADRAFT_186863 OS=Physcomitrium patens OX=3218 GN=PHYPADRAFT_186863 PE=3 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 5.0e-11 Identity = 32/58 (55.17%), Postives = 42/58 (72.41%), Query Frame = 0
BLAST of Sed0014592 vs. ExPASy TrEMBL
Match: A0A5A7T6G8 (LYR motif-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G00680 PE=4 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 2.8e-36 Identity = 73/82 (89.02%), Postives = 82/82 (100.00%), Query Frame = 0
BLAST of Sed0014592 vs. ExPASy TrEMBL
Match: A0A1S3C3W4 (LYR motif-containing protein At3g19508 OS=Cucumis melo OX=3656 GN=LOC103496191 PE=4 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 2.8e-36 Identity = 73/82 (89.02%), Postives = 82/82 (100.00%), Query Frame = 0
BLAST of Sed0014592 vs. ExPASy TrEMBL
Match: A0A6J1FPX9 (LYR motif-containing protein At3g19508 OS=Cucurbita moschata OX=3662 GN=LOC111447159 PE=4 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 5.2e-35 Identity = 72/82 (87.80%), Postives = 81/82 (98.78%), Query Frame = 0
BLAST of Sed0014592 vs. ExPASy TrEMBL
Match: A0A6J1D7N7 (LYR motif-containing protein At3g19508 OS=Momordica charantia OX=3673 GN=LOC111017679 PE=4 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 1.2e-34 Identity = 73/80 (91.25%), Postives = 78/80 (97.50%), Query Frame = 0
BLAST of Sed0014592 vs. ExPASy TrEMBL
Match: A0A6J1J656 (LYR motif-containing protein At3g19508 OS=Cucurbita maxima OX=3661 GN=LOC111482114 PE=4 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 3.4e-34 Identity = 71/82 (86.59%), Postives = 81/82 (98.78%), Query Frame = 0
BLAST of Sed0014592 vs. TAIR 10
Match: AT3G19508.1 (unknown protein; LOCATED IN: mitochondrion; Has 34 Blast hits to 34 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 122.1 bits (305), Expect = 2.1e-28 Identity = 57/80 (71.25%), Postives = 68/80 (85.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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