Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACATTTGTACAAAAATAATGATAAATAAATATAGTTTATAGAATTTTCGTCGGAGCCCCGATCCATTTGGTATAGGCAACTGTTGGGATATTTCGTTTCCCCTACAACAAGGCAAAGCCAAAATTGTGTGACGGCCAATTCACACGCCACATTTTGGCGCTCAAATAAAACCCATTTCGTCTCAGAAATTTTCCACAATTTTCCTCTCTTCACCTTTCGATCAGATTCTTGATCTCAAATCTTCACCGCCGCCTAAACCTCACTGGAATCAATCGATCCATCCATGGCCGGAACCGGCTCCTACGATTGGGCGGACCAGTGGGACTACACCGACTCCAACGACGTCGCCGCCGCAGACAACAAGAAGAAGAGCAGCGGCGCCACCGCCGGCAACAGCTCGGCGAAGTACAAGCAGAAGGTCGGCGAAGGCCTTGGTAAGACCAAAGCTGCGGCCTCTAATGGCGTCAAAAAGGTCAAAGAAGGAACCTCTCTCGGTTTTCAATGGATCAAAGATAAATACAACAAATCCGCTCGTAAGAATTAGATTTTTCCTTCGTATTCAATTTCTCTCTCGCTCTCTGTTTTCATTGTAGAATTCAATTTCTTTTGTTTTTCTTCTGTTGATTATATAGATCGTTACAT
mRNA sequence
CACATTTGTACAAAAATAATGATAAATAAATATAGTTTATAGAATTTTCGTCGGAGCCCCGATCCATTTGGTATAGGCAACTGTTGGGATATTTCGTTTCCCCTACAACAAGGCAAAGCCAAAATTGTGTGACGGCCAATTCACACGCCACATTTTGGCGCTCAAATAAAACCCATTTCGTCTCAGAAATTTTCCACAATTTTCCTCTCTTCACCTTTCGATCAGATTCTTGATCTCAAATCTTCACCGCCGCCTAAACCTCACTGGAATCAATCGATCCATCCATGGCCGGAACCGGCTCCTACGATTGGGCGGACCAGTGGGACTACACCGACTCCAACGACGTCGCCGCCGCAGACAACAAGAAGAAGAGCAGCGGCGCCACCGCCGGCAACAGCTCGGCGAAGTACAAGCAGAAGGTCGGCGAAGGCCTTGGTAAGACCAAAGCTGCGGCCTCTAATGGCGTCAAAAAGGTCAAAGAAGGAACCTCTCTCGGTTTTCAATGGATCAAAGATAAATACAACAAATCCGCTCGTAAGAATTAGATTTTTCCTTCGTATTCAATTTCTCTCTCGCTCTCTGTTTTCATTGTAGAATTCAATTTCTTTTGTTTTTCTTCTGTTGATTATATAGATCGTTACAT
Coding sequence (CDS)
ATGGCCGGAACCGGCTCCTACGATTGGGCGGACCAGTGGGACTACACCGACTCCAACGACGTCGCCGCCGCAGACAACAAGAAGAAGAGCAGCGGCGCCACCGCCGGCAACAGCTCGGCGAAGTACAAGCAGAAGGTCGGCGAAGGCCTTGGTAAGACCAAAGCTGCGGCCTCTAATGGCGTCAAAAAGGTCAAAGAAGGAACCTCTCTCGGTTTTCAATGGATCAAAGATAAATACAACAAATCCGCTCGTAAGAATTAG
Protein sequence
MAGTGSYDWADQWDYTDSNDVAAADNKKKSSGATAGNSSAKYKQKVGEGLGKTKAAASNGVKKVKEGTSLGFQWIKDKYNKSARKN
Homology
BLAST of Sed0014302 vs. NCBI nr
Match:
XP_023516550.1 (uncharacterized protein LOC111780400 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 129.4 bits (324), Expect = 1.5e-26
Identity = 68/85 (80.00%), Postives = 74/85 (87.06%), Query Frame = 0
Query: 1 MAGTGSYDWADQWDYTDSNDVAAADNKKKSSGATAGNSSAKYKQKVGEGLGKTKAAASNG 60
MAG+GSYDWADQWDY+DS DV +NKKKS G GN++ KYKQKVGEGLGKTKA ASNG
Sbjct: 39 MAGSGSYDWADQWDYSDSKDV-VTENKKKSGG---GNTTTKYKQKVGEGLGKTKAVASNG 98
Query: 61 VKKVKEGTSLGFQWIKDKYNKSARK 86
VKKVKEGTSLGFQWIKDKYNK+A K
Sbjct: 99 VKKVKEGTSLGFQWIKDKYNKTAHK 119
BLAST of Sed0014302 vs. NCBI nr
Match:
XP_038879790.1 (uncharacterized protein LOC120071534 [Benincasa hispida])
HSP 1 Score: 127.9 bits (320), Expect = 4.3e-26
Identity = 68/85 (80.00%), Postives = 72/85 (84.71%), Query Frame = 0
Query: 1 MAGTGSYDWADQWDYTDSNDVAAADNKKKSSGATAGNSSAKYKQKVGEGLGKTKAAASNG 60
MA GSYDWADQWDY DS DV +NKKKS G GNS+AKYKQKVGEGLGKTKA ASNG
Sbjct: 1 MAANGSYDWADQWDYNDSTDV-VTENKKKSGG---GNSTAKYKQKVGEGLGKTKAVASNG 60
Query: 61 VKKVKEGTSLGFQWIKDKYNKSARK 86
VK+VKEGTSLGFQWIKDKYNK+A K
Sbjct: 61 VKRVKEGTSLGFQWIKDKYNKTAHK 81
BLAST of Sed0014302 vs. NCBI nr
Match:
XP_022988421.1 (uncharacterized protein LOC111485668 [Cucurbita maxima] >XP_022988422.1 uncharacterized protein LOC111485668 [Cucurbita maxima])
HSP 1 Score: 127.1 bits (318), Expect = 7.3e-26
Identity = 67/85 (78.82%), Postives = 72/85 (84.71%), Query Frame = 0
Query: 1 MAGTGSYDWADQWDYTDSNDVAAADNKKKSSGATAGNSSAKYKQKVGEGLGKTKAAASNG 60
MAG GSYDWADQWDY+DS DV + KKKS G GN++ KYKQKVGEGLGKTKA ASNG
Sbjct: 39 MAGNGSYDWADQWDYSDSKDV-VTETKKKSGG--GGNTTTKYKQKVGEGLGKTKAVASNG 98
Query: 61 VKKVKEGTSLGFQWIKDKYNKSARK 86
VKKVKEGTSLGFQWIKDKYNK+A K
Sbjct: 99 VKKVKEGTSLGFQWIKDKYNKTAHK 120
BLAST of Sed0014302 vs. NCBI nr
Match:
KAG6589470.1 (Alpha-N-acetylglucosaminidase, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 126.7 bits (317), Expect = 9.6e-26
Identity = 67/85 (78.82%), Postives = 72/85 (84.71%), Query Frame = 0
Query: 1 MAGTGSYDWADQWDYTDSNDVAAADNKKKSSGATAGNSSAKYKQKVGEGLGKTKAAASNG 60
MAG GSYDWADQWDY+DS DV +N KKS G GN++ KYKQKVGEGLGKTKA ASNG
Sbjct: 82 MAGNGSYDWADQWDYSDSKDV-VTENTKKSGG---GNTTTKYKQKVGEGLGKTKAVASNG 141
Query: 61 VKKVKEGTSLGFQWIKDKYNKSARK 86
VKKVKEGTSLGFQWIKDKYNK+A K
Sbjct: 142 VKKVKEGTSLGFQWIKDKYNKTAHK 162
BLAST of Sed0014302 vs. NCBI nr
Match:
XP_022921775.1 (uncharacterized protein LOC111429929 [Cucurbita moschata])
HSP 1 Score: 125.6 bits (314), Expect = 2.1e-25
Identity = 66/85 (77.65%), Postives = 72/85 (84.71%), Query Frame = 0
Query: 1 MAGTGSYDWADQWDYTDSNDVAAADNKKKSSGATAGNSSAKYKQKVGEGLGKTKAAASNG 60
MAG GSYDWADQWDY+DS DV +N KKS G GN++ KYKQKVGEGLGKTKA ASNG
Sbjct: 1 MAGNGSYDWADQWDYSDSKDV-VTENTKKSGG---GNTTTKYKQKVGEGLGKTKAVASNG 60
Query: 61 VKKVKEGTSLGFQWIKDKYNKSARK 86
VKKVK+GTSLGFQWIKDKYNK+A K
Sbjct: 61 VKKVKQGTSLGFQWIKDKYNKTAHK 81
BLAST of Sed0014302 vs. ExPASy TrEMBL
Match:
A0A6J1JCZ5 (uncharacterized protein LOC111485668 OS=Cucurbita maxima OX=3661 GN=LOC111485668 PE=4 SV=1)
HSP 1 Score: 127.1 bits (318), Expect = 3.5e-26
Identity = 67/85 (78.82%), Postives = 72/85 (84.71%), Query Frame = 0
Query: 1 MAGTGSYDWADQWDYTDSNDVAAADNKKKSSGATAGNSSAKYKQKVGEGLGKTKAAASNG 60
MAG GSYDWADQWDY+DS DV + KKKS G GN++ KYKQKVGEGLGKTKA ASNG
Sbjct: 39 MAGNGSYDWADQWDYSDSKDV-VTETKKKSGG--GGNTTTKYKQKVGEGLGKTKAVASNG 98
Query: 61 VKKVKEGTSLGFQWIKDKYNKSARK 86
VKKVKEGTSLGFQWIKDKYNK+A K
Sbjct: 99 VKKVKEGTSLGFQWIKDKYNKTAHK 120
BLAST of Sed0014302 vs. ExPASy TrEMBL
Match:
A0A6J1E6S2 (uncharacterized protein LOC111429929 OS=Cucurbita moschata OX=3662 GN=LOC111429929 PE=4 SV=1)
HSP 1 Score: 125.6 bits (314), Expect = 1.0e-25
Identity = 66/85 (77.65%), Postives = 72/85 (84.71%), Query Frame = 0
Query: 1 MAGTGSYDWADQWDYTDSNDVAAADNKKKSSGATAGNSSAKYKQKVGEGLGKTKAAASNG 60
MAG GSYDWADQWDY+DS DV +N KKS G GN++ KYKQKVGEGLGKTKA ASNG
Sbjct: 1 MAGNGSYDWADQWDYSDSKDV-VTENTKKSGG---GNTTTKYKQKVGEGLGKTKAVASNG 60
Query: 61 VKKVKEGTSLGFQWIKDKYNKSARK 86
VKKVK+GTSLGFQWIKDKYNK+A K
Sbjct: 61 VKKVKQGTSLGFQWIKDKYNKTAHK 81
BLAST of Sed0014302 vs. ExPASy TrEMBL
Match:
A0A5A7UUQ6 (Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G002040 PE=4 SV=1)
HSP 1 Score: 123.6 bits (309), Expect = 3.9e-25
Identity = 67/80 (83.75%), Postives = 70/80 (87.50%), Query Frame = 0
Query: 6 SYDWADQWDYTDSNDVAAADNKKKSSGATAGNSSAKYKQKVGEGLGKTKAAASNGVKKVK 65
SYDWADQWDY DS DV +NKKK SG + GNSSAKYKQKVGEGLGKTKA ASNGVKKVK
Sbjct: 8 SYDWADQWDYNDSADV-VTNNKKKISG-SGGNSSAKYKQKVGEGLGKTKAVASNGVKKVK 67
Query: 66 EGTSLGFQWIKDKYNKSARK 86
EGTSLGFQWIKDKYNK+A K
Sbjct: 68 EGTSLGFQWIKDKYNKTAHK 85
BLAST of Sed0014302 vs. ExPASy TrEMBL
Match:
A0A1S3BW93 (uncharacterized protein LOC103493940 OS=Cucumis melo OX=3656 GN=LOC103493940 PE=4 SV=1)
HSP 1 Score: 123.6 bits (309), Expect = 3.9e-25
Identity = 67/80 (83.75%), Postives = 70/80 (87.50%), Query Frame = 0
Query: 6 SYDWADQWDYTDSNDVAAADNKKKSSGATAGNSSAKYKQKVGEGLGKTKAAASNGVKKVK 65
SYDWADQWDY DS DV +NKKK SG + GNSSAKYKQKVGEGLGKTKA ASNGVKKVK
Sbjct: 8 SYDWADQWDYNDSADV-VTNNKKKISG-SGGNSSAKYKQKVGEGLGKTKAVASNGVKKVK 67
Query: 66 EGTSLGFQWIKDKYNKSARK 86
EGTSLGFQWIKDKYNK+A K
Sbjct: 68 EGTSLGFQWIKDKYNKTAHK 85
BLAST of Sed0014302 vs. ExPASy TrEMBL
Match:
A0A0A0LUC7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G005770 PE=4 SV=1)
HSP 1 Score: 122.9 bits (307), Expect = 6.7e-25
Identity = 65/80 (81.25%), Postives = 71/80 (88.75%), Query Frame = 0
Query: 6 SYDWADQWDYTDSNDVAAADNKKKSSGATAGNSSAKYKQKVGEGLGKTKAAASNGVKKVK 65
SYDWADQWDY+DS DV +DNKKK+ G GNSSAKYKQKVGEGLGKTK+ ASNGVKKVK
Sbjct: 8 SYDWADQWDYSDSTDV-VSDNKKKTGG---GNSSAKYKQKVGEGLGKTKSVASNGVKKVK 67
Query: 66 EGTSLGFQWIKDKYNKSARK 86
EGTSLGFQWIK+KYNK+A K
Sbjct: 68 EGTSLGFQWIKEKYNKTAHK 83
BLAST of Sed0014302 vs. TAIR 10
Match:
AT3G48180.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19020.1); Has 84 Blast hits to 84 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 83.6 bits (205), Expect = 8.7e-17
Identity = 46/78 (58.97%), Postives = 57/78 (73.08%), Query Frame = 0
Query: 9 WADQWDYTDSNDVAAADNKKKSSGATAGNSSAKYKQKVGEGLGKTKAAASNGVKKVKEGT 68
WA+QW DSN ++ K + G G +S+KYK+KVG GLGKTKAAAS+G+KKVK GT
Sbjct: 6 WAEQW---DSNQQSSG---KTTHGGEGGGASSKYKEKVGAGLGKTKAAASSGLKKVKIGT 65
Query: 69 SLGFQWIKDKYNKSARKN 87
SLG W+KDKYNK+ KN
Sbjct: 66 SLGLNWVKDKYNKTTTKN 77
BLAST of Sed0014302 vs. TAIR 10
Match:
AT1G19020.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48180.1); Has 88 Blast hits to 88 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 88; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 72.4 bits (176), Expect = 2.0e-13
Identity = 40/82 (48.78%), Postives = 59/82 (71.95%), Query Frame = 0
Query: 9 WADQWDYTDSNDVA-----AADNKKKSSGATAGNSSAKYKQKVGEGLGKTKAAASNGVKK 68
WADQWD +S D A + +SSG+ A +++ KYK+K+G+GL KTKA AS+G KK
Sbjct: 6 WADQWD--NSGDSAKGGRIGSGAVVRSSGSGATSNTTKYKEKMGQGLDKTKAVASSGFKK 65
Query: 69 VKEGTSLGFQWIKDKYNKSARK 86
+K G+++GF+W+KDKY+K+ K
Sbjct: 66 LKTGSAIGFRWVKDKYHKTTHK 85
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_023516550.1 | 1.5e-26 | 80.00 | uncharacterized protein LOC111780400 [Cucurbita pepo subsp. pepo] | [more] |
XP_038879790.1 | 4.3e-26 | 80.00 | uncharacterized protein LOC120071534 [Benincasa hispida] | [more] |
XP_022988421.1 | 7.3e-26 | 78.82 | uncharacterized protein LOC111485668 [Cucurbita maxima] >XP_022988422.1 uncharac... | [more] |
KAG6589470.1 | 9.6e-26 | 78.82 | Alpha-N-acetylglucosaminidase, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
XP_022921775.1 | 2.1e-25 | 77.65 | uncharacterized protein LOC111429929 [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1JCZ5 | 3.5e-26 | 78.82 | uncharacterized protein LOC111485668 OS=Cucurbita maxima OX=3661 GN=LOC111485668... | [more] |
A0A6J1E6S2 | 1.0e-25 | 77.65 | uncharacterized protein LOC111429929 OS=Cucurbita moschata OX=3662 GN=LOC1114299... | [more] |
A0A5A7UUQ6 | 3.9e-25 | 83.75 | Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS=C... | [more] |
A0A1S3BW93 | 3.9e-25 | 83.75 | uncharacterized protein LOC103493940 OS=Cucumis melo OX=3656 GN=LOC103493940 PE=... | [more] |
A0A0A0LUC7 | 6.7e-25 | 81.25 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G005770 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT3G48180.1 | 8.7e-17 | 58.97 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
AT1G19020.1 | 2.0e-13 | 48.78 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |