Sed0013496 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGCGAACGTAACCGCGTAACCGCATCATTTGAAAGTTATAATATATCGAATTTAGAACCGCCTTTATAGAAAACGTAGGAATCGTCAAACACGTATTCCAAAGGCAAATTCTAAGCATCTTCTCTCTCTATATAATCCCAATCCATTATATATCATTTCCTTTCTTTCATTCCCTTATTTATCTTTTCACCACCAAATCGCTCCGATTATTAATGGTTTCCACCAAATCCCTCGTTTCCATAGCTTTCATCGCTCTTCTCTTCTTCTCCGAATCCCTCGCCACCACTTCTGCCGCCGGCTGCGGCGGCGATTCCAAGTCCCTCACCGGAAATCCCCGTCGGAACATTCTTCAGACGGCGGCGCATGAGTCGAGCTTGGATGGGAAGATGAATGTTCATGTAAAAAGGGTGCGGTTTACTCGACCTGTGACTACTGGCACTACCGGCCGTAGATCGGCGGCCAATCGGAGCTCAGTGCCGGCTTCTGGCGTTGGATCTGTGCTCTCTCTCTTCGTTTTTCTCGGATTCTTCTTCTGATTTTTTTTTTTTTAATTTTTGTGAAAATTTGGGGTTGTTATTAATTAAGGCTGTAATATTGTTTCATAAGATCATGATACCATTTTCATTCATTCACTTCTAGATTGACGATTGTCATTGAGTAATCACTATTATTTAATCTTAACTCTCTTTTTGGAA AGCGAACGTAACCGCGTAACCGCATCATTTGAAAGTTATAATATATCGAATTTAGAACCGCCTTTATAGAAAACGTAGGAATCGTCAAACACGTATTCCAAAGGCAAATTCTAAGCATCTTCTCTCTCTATATAATCCCAATCCATTATATATCATTTCCTTTCTTTCATTCCCTTATTTATCTTTTCACCACCAAATCGCTCCGATTATTAATGGTTTCCACCAAATCCCTCGTTTCCATAGCTTTCATCGCTCTTCTCTTCTTCTCCGAATCCCTCGCCACCACTTCTGCCGCCGGCTGCGGCGGCGATTCCAAGTCCCTCACCGGAAATCCCCGTCGGAACATTCTTCAGACGGCGGCGCATGAGTCGAGCTTGGATGGGAAGATGAATGTTCATGTAAAAAGGGTGCGGTTTACTCGACCTGTGACTACTGGCACTACCGGCCGTAGATCGGCGGCCAATCGGAGCTCAGTGCCGGCTTCTGGCGTTGGATCTGTGCTCTCTCTCTTCGTTTTTCTCGGATTCTTCTTCTGATTTTTTTTTTTTTAATTTTTGTGAAAATTTGGGGTTGTTATTAATTAAGGCTGTAATATTGTTTCATAAGATCATGATACCATTTTCATTCATTCACTTCTAGATTGACGATTGTCATTGAGTAATCACTATTATTTAATCTTAACTCTCTTTTTGGAA ATGGTTTCCACCAAATCCCTCGTTTCCATAGCTTTCATCGCTCTTCTCTTCTTCTCCGAATCCCTCGCCACCACTTCTGCCGCCGGCTGCGGCGGCGATTCCAAGTCCCTCACCGGAAATCCCCGTCGGAACATTCTTCAGACGGCGGCGCATGAGTCGAGCTTGGATGGGAAGATGAATGTTCATGTAAAAAGGGTGCGGTTTACTCGACCTGTGACTACTGGCACTACCGGCCGTAGATCGGCGGCCAATCGGAGCTCAGTGCCGGCTTCTGGCGTTGGATCTGTGCTCTCTCTCTTCGTTTTTCTCGGATTCTTCTTCTGA MVSTKSLVSIAFIALLFFSESLATTSAAGCGGDSKSLTGNPRRNILQTAAHESSLDGKMNVHVKRVRFTRPVTTGTTGRRSAANRSSVPASGVGSVLSLFVFLGFFF Homology
BLAST of Sed0013496 vs. NCBI nr
Match: KAG6575859.1 (hypothetical protein SDJN03_26498, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014393.1 hypothetical protein SDJN02_24570, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 91.3 bits (225), Expect = 5.5e-15 Identity = 67/113 (59.29%), Postives = 75/113 (66.37%), Query Frame = 0
BLAST of Sed0013496 vs. NCBI nr
Match: KGN44886.1 (hypothetical protein Csa_015765 [Cucumis sativus]) HSP 1 Score: 82.8 bits (203), Expect = 2.0e-12 Identity = 59/106 (55.66%), Postives = 73/106 (68.87%), Query Frame = 0
BLAST of Sed0013496 vs. NCBI nr
Match: KAA0068047.1 (protein no-on-transient A-like [Cucumis melo var. makuwa] >TYK18081.1 protein no-on-transient A-like [Cucumis melo var. makuwa]) HSP 1 Score: 82.8 bits (203), Expect = 2.0e-12 Identity = 58/103 (56.31%), Postives = 73/103 (70.87%), Query Frame = 0
BLAST of Sed0013496 vs. NCBI nr
Match: KAG6593163.1 (hypothetical protein SDJN03_12639, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 75.9 bits (185), Expect = 2.4e-10 Identity = 57/107 (53.27%), Postives = 66/107 (61.68%), Query Frame = 0
BLAST of Sed0013496 vs. NCBI nr
Match: KAA0046715.1 (E3 ubiquitin-protein ligase MIEL1-like [Cucumis melo var. makuwa] >TYK18251.1 E3 ubiquitin-protein ligase MIEL1-like [Cucumis melo var. makuwa]) HSP 1 Score: 67.8 bits (164), Expect = 6.6e-08 Identity = 55/117 (47.01%), Postives = 67/117 (57.26%), Query Frame = 0
BLAST of Sed0013496 vs. ExPASy TrEMBL
Match: A0A5A7VLE5 (Protein no-on-transient A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00010 PE=4 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 9.5e-13 Identity = 58/103 (56.31%), Postives = 73/103 (70.87%), Query Frame = 0
BLAST of Sed0013496 vs. ExPASy TrEMBL
Match: A0A0A0KAQ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394060 PE=4 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 9.5e-13 Identity = 59/106 (55.66%), Postives = 73/106 (68.87%), Query Frame = 0
BLAST of Sed0013496 vs. ExPASy TrEMBL
Match: A0A5D3D3Y6 (E3 ubiquitin-protein ligase MIEL1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001920 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 3.2e-08 Identity = 55/117 (47.01%), Postives = 67/117 (57.26%), Query Frame = 0
BLAST of Sed0013496 vs. ExPASy TrEMBL
Match: A0A0A0K929 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394020 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 2.5e-05 Identity = 51/123 (41.46%), Postives = 67/123 (54.47%), Query Frame = 0
BLAST of Sed0013496 vs. ExPASy TrEMBL
Match: A0A1S3BT53 (E3 ubiquitin-protein ligase MIEL1-like OS=Cucumis melo OX=3656 GN=LOC103492883 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 2.1e-04 Identity = 47/99 (47.47%), Postives = 55/99 (55.56%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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