Sed0011505 (gene) Chayote v1

Overview


Name	Sed0011505
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	LG05: 24810107 .. 24811998 (-)
RNA-Seq Expression	Sed0011505
Synteny	Sed0011505

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGAATGGAAGGGATTTTGGATAAGTTGGAGAAAAACAAGAAAAAACATTAATTTGTGAATTAAGCTAGCATTAATTTGATATGATCCAGGATCTAGATTATATCAAAAGATAACAAATTACAAGATAAGCCAAGTTTTGATAGGAACTTGGAACCTCCCCTCTCAAGAGAATCTCTTGAGCCCTACAATAAATTACTCAATTAATCATTTAACAATTGGATGCCTAAACCCTAACCTAACCCACTCTATTTATAACAAAATACTAATTTATTCTCCAAGTAATAGCTAAATAGAGCCCTAGGCCCAATCTTATCATAATTTTTATTTTTATTTAACCAATTTTGATAAATTTAATTTCAAACTAGCAATATGGACTAATTTAAGATAGTTTATGATTAAAGTTTAGACGTTTAAAAGTGTAGAGATTAAAACTGAATGTAGTCTGATCTACCAAGACTAAATTAGTATTTTAACTTAAATTTTACTAACTACATCATAACTCTCTAGCTTAAAAGGCATTATTTTACCAGTGGCCTACAACTAACATTGTTGTCTTTTATGAATCCTCCAACTTTTTGAAAAATAATACTAACATGGATTGTATTCTAATCAATAAATGGAATCTATAATGGTTCCTTGATTGGTTGTATGAGATAATGAAGATTGTTGAGTTCTAGATATCTCCTCTTCAACCAATAAGAAGAGGATGAAGATCTACCAGGATAGACTTTGTGGGTCTCACAAGATACTATATAAGAAGATTTCATACTTGTTACAATTCATCAACAACTTCATTCAAAAGCACTTTAAGGACTTACTTCCTTTGAGTTAAAGTGGTAGGCATGGCAGCCATGACTCTCTCATCCACCTTCACTGGAAAAGCAGTTCCTTTGACTGCACCGACCGAGCAGTTTTCCTCGGTTCGCAGCAATGGGAGAGTGTCGATGAGGAAATCCGGAAAGCCAGCATCTTCCTCAGGCAGCCCATGGTATGGCCCTGACCGTGTTAAGTACCTTGGACCATTCTCTGGCGAGTCTCCATCTTACCTCAAAGGAGAATTCCCTGGTGATTATGGTTGGGACACTGCAGGCTTATCCGCCGACCCCGAGACGTTTGCTAAGAACCGAGAGCTCGAAGTGATTCACAGTAGATGGGCCATGCTTGGTGCTCTAGGATGTGTGTTCCCAGAGCTTCTTTCCAGGAATGGAGTCAAGTTTGGTGAAGCAGTTTGGTTTAAGGCTGGTTCACAAATCTTCAGTGAGGGTGGGCTTGACTATCTTGGAAACCCAAGTCTTGTTCATGCACAAAGCATTTTGGCCATTTGGGCATCCCAAGTTGTGCTTATGAGTGCAGTTGAAGGTTATCGTATTGCGGGAGGTCCTCTCGGAGAAATTACCGATCCCATATACCCAGGTGGAAGCTTTGATCCCCTCGGGTTGGCTGATGATCCAGACGCATTTGCAGAGCTTAAGGTGAAAGAACTTAAGAATGGCCGTCTTGCTATGTTTTCTATGTTTGGATTCTTCGTGCAGGCGATTGTAACAGGAAAAGGTCCTTTGGAGAACCTTGCTGATCATCTTGCTGATCCTGTCAACAACAATGCTTGGTCTTATGCTACCAACTTTGTACCTGGGAAGTGAAAATATGAAGTTATGTTTGAACAAGCTTTCAATTCATTCCATTGAGCGCATAGCGTGTAAAGTGTAGTATCAAAATGTTGAATATCAACAATGGCTGTTAAAATCAATGAAACTGTTCCTAAGCAAGTAGTTGCTTTATTGATCCTTTAAAAATGGAAAAAGCTATAAGTCCAACTTCAATAAGTTGAAATGAAATGCCATAATTCTTCAAGAACTTGGCAAATATAACAAAAAGGATAAAAATGAT

mRNA sequence

ATGGTGGAATGGAAGGGATTTTGGATAAGTTGGAGAAAAACAAGAAAAAACATTAATTTCAATGGGAGAGTGTCGATGAGGAAATCCGGAAAGCCAGCATCTTCCTCAGGCAGCCCATGGTATGGCCCTGACCGTGTTAAGTACCTTGGACCATTCTCTGGCGAGTCTCCATCTTACCTCAAAGGAGAATTCCCTGGTGATTATGGTTGGGACACTGCAGGCTTATCCGCCGACCCCGAGACTAGATGGGCCATGCTTGGTGCTCTAGGATGTGTGTTCCCAGAGCTTCTTTCCAGGAATGGAGTCAAGTTTGGTGAAGCAGTTTGGTTTAAGGCTGGTTCACAAATCTTCAGTGAGGGTGGGCTTGACTATCTTGGAAACCCAAGTCTTGTTCATGCACAAAGCATTTTGGCCATTTGGGCATCCCAAGTTGTGCTTATGAGTGCAGTTGAAGGTTATCGTATTGCGGGAGGTCCTCTCGGAGAAATTACCGATCCCATATACCCAGGTGGAAGCTTTGATCCCCTCGGGTTGGCTGATGATCCAGACGCATTTGCAGAGCTTAAGGTGAAAGAACTTAAGAATGGCCGTCTTGCTATGTTTTCTATGTTTGGATTCTTCGTGCAGGCGATTGTAACAGGAAAAGGTCCTTTGGAGAACCTTGCTGATCATCTTGCTGATCCTGTCAACAACAATGCTTGGTCTTATGCTACCAACTTTGTACCTGGGAAGTGAAAATATGAAGTTATGTTTGAACAAGCTTTCAATTCATTCCATTGAGCGCATAGCGTGTAAAGTGTAGTATCAAAATGTTGAATATCAACAATGGCTGTTAAAATCAATGAAACTGTTCCTAAGCAAGTAGTTGCTTTATTGATCCTTTAAAAATGGAAAAAGCTATAAGTCCAACTTCAATAAGTTGAAATGAAATGCCATAATTCTTCAAGAACTTGGCAAATATAACAAAAAGGATAAAAATGAT

Coding sequence (CDS)

ATGGTGGAATGGAAGGGATTTTGGATAAGTTGGAGAAAAACAAGAAAAAACATTAATTTCAATGGGAGAGTGTCGATGAGGAAATCCGGAAAGCCAGCATCTTCCTCAGGCAGCCCATGGTATGGCCCTGACCGTGTTAAGTACCTTGGACCATTCTCTGGCGAGTCTCCATCTTACCTCAAAGGAGAATTCCCTGGTGATTATGGTTGGGACACTGCAGGCTTATCCGCCGACCCCGAGACTAGATGGGCCATGCTTGGTGCTCTAGGATGTGTGTTCCCAGAGCTTCTTTCCAGGAATGGAGTCAAGTTTGGTGAAGCAGTTTGGTTTAAGGCTGGTTCACAAATCTTCAGTGAGGGTGGGCTTGACTATCTTGGAAACCCAAGTCTTGTTCATGCACAAAGCATTTTGGCCATTTGGGCATCCCAAGTTGTGCTTATGAGTGCAGTTGAAGGTTATCGTATTGCGGGAGGTCCTCTCGGAGAAATTACCGATCCCATATACCCAGGTGGAAGCTTTGATCCCCTCGGGTTGGCTGATGATCCAGACGCATTTGCAGAGCTTAAGGTGAAAGAACTTAAGAATGGCCGTCTTGCTATGTTTTCTATGTTTGGATTCTTCGTGCAGGCGATTGTAACAGGAAAAGGTCCTTTGGAGAACCTTGCTGATCATCTTGCTGATCCTGTCAACAACAATGCTTGGTCTTATGCTACCAACTTTGTACCTGGGAAGTGA

Protein sequence

MVEWKGFWISWRKTRKNINFNGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPETRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMSAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK

Homology

[Close]

BLAST of Sed0011505 vs. NCBI nr
Match: XP_008447450.1 (PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo] >KAA0038103.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo var. makuwa] >TYK20505.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 449.5 bits (1155), Expect = 1.8e-122
Identity = 216/240 (90.00%), Postives = 223/240 (92.92%), Query Frame = 0


Query: 17  NINFNGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLS 76
           ++  NGR+SMRKSGKPA+SSGSPWYGPDRVKYLGPFSGE PSYLKGEFPGDYGWDTAGLS
Sbjct: 26  SVRSNGRISMRKSGKPAASSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLS 85

Query: 77  ADPET------------RWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDY 136
           ADPET            RWAMLGALGCVFPELLSRNGV FGEAVWFKAGSQIFSEGGLDY
Sbjct: 86  ADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVNFGEAVWFKAGSQIFSEGGLDY 145

Query: 137 LGNPSLVHAQSILAIWASQVVLMSAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDA 196
           LGNPSL+HAQSILAIWASQVVLM AVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDP+A
Sbjct: 146 LGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEA 205

Query: 197 FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 245
           FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 206 FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Sed0011505 vs. NCBI nr
Match: XP_004148579.1 (chlorophyll a-b binding protein of LHCII type 1-like [Cucumis sativus] >KGN58532.1 hypothetical protein Csa_001702 [Cucumis sativus])

HSP 1 Score: 449.5 bits (1155), Expect = 1.8e-122
Identity = 216/240 (90.00%), Postives = 224/240 (93.33%), Query Frame = 0


Query: 17  NINFNGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLS 76
           ++  NGRV+MRKSGKPA+SSGSPWYGPDRVKYLGPFSGE PSYLKGEFPGDYGWDTAGLS
Sbjct: 26  SVRSNGRVTMRKSGKPAASSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLS 85

Query: 77  ADPET------------RWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDY 136
           ADPET            RWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDY
Sbjct: 86  ADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDY 145

Query: 137 LGNPSLVHAQSILAIWASQVVLMSAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDA 196
           LGNPSL+HAQSILAIWASQVVLM AVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDP+A
Sbjct: 146 LGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEA 205

Query: 197 FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 245
           F+ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 206 FSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Sed0011505 vs. NCBI nr
Match: XP_022998479.1 (chlorophyll a-b binding protein of LHCII type 1 [Cucurbita maxima])

HSP 1 Score: 448.7 bits (1153), Expect = 3.1e-122
Identity = 217/240 (90.42%), Postives = 222/240 (92.50%), Query Frame = 0


Query: 17  NINFNGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLS 76
           ++  NGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDTAGLS
Sbjct: 26  SVRSNGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 85

Query: 77  ADPET------------RWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDY 136
           ADPET            RWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDY
Sbjct: 86  ADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDY 145

Query: 137 LGNPSLVHAQSILAIWASQVVLMSAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDA 196
           LGNPSLVHAQSILAIWA Q+VLM AVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDP+A
Sbjct: 146 LGNPSLVHAQSILAIWACQIVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEA 205

Query: 197 FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 245
           FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 206 FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Sed0011505 vs. NCBI nr
Match: XP_038903667.1 (chlorophyll a-b binding protein of LHCII type 1-like [Benincasa hispida])

HSP 1 Score: 448.0 bits (1151), Expect = 5.3e-122
Identity = 215/240 (89.58%), Postives = 223/240 (92.92%), Query Frame = 0


Query: 17  NINFNGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLS 76
           ++  NGRVSMR+SGKPA+SSGSPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDTAGLS
Sbjct: 26  SVRSNGRVSMRRSGKPAASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 85

Query: 77  ADPET------------RWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDY 136
           ADPET            RWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDY
Sbjct: 86  ADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDY 145

Query: 137 LGNPSLVHAQSILAIWASQVVLMSAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDA 196
           LGNPSL+HAQSILAIWASQVVLM AVEGYRIAGGPLGE+TDPIYPGGSFDPLGLADDP+A
Sbjct: 146 LGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEA 205

Query: 197 FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 245
           FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 206 FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Sed0011505 vs. NCBI nr
Match: XP_022948926.1 (chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita moschata] >XP_023524829.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita pepo subsp. pepo] >KAG6606914.1 Chlorophyll a-b binding protein 3C, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 448.0 bits (1151), Expect = 5.3e-122
Identity = 217/240 (90.42%), Postives = 222/240 (92.50%), Query Frame = 0


Query: 17  NINFNGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLS 76
           ++  NGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDTAGLS
Sbjct: 26  SVRSNGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 85

Query: 77  ADPET------------RWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDY 136
           ADPET            RWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDY
Sbjct: 86  ADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDY 145

Query: 137 LGNPSLVHAQSILAIWASQVVLMSAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDA 196
           LGNPSLVHAQSILAIWA QVVLM AVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDP+A
Sbjct: 146 LGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEA 205

Query: 197 FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 245
           FAELKVKELKNGRLAMFSMFG+FVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 206 FAELKVKELKNGRLAMFSMFGYFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Sed0011505 vs. ExPASy Swiss-Prot
Match: P08221 (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 1.5e-119
Identity = 208/239 (87.03%), Postives = 215/239 (89.96%), Query Frame = 0


Query: 18  INFNGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSA 77
           I  N + +MRK+   + SSGSPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDTAGLSA
Sbjct: 17  IQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSA 76

Query: 78  DPET------------RWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYL 137
           DPET            RWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYL
Sbjct: 77  DPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYL 136

Query: 138 GNPSLVHAQSILAIWASQVVLMSAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAF 197
           GNPSLVHAQSILAIWA QVVLM AVEGYRIAGGPLGE+TDPIYPGGSFDPLGLADDP+AF
Sbjct: 137 GNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAF 196

Query: 198 AELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 245
           AELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 197 AELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 255

[Close]

BLAST of Sed0011505 vs. ExPASy Swiss-Prot
Match: P09756 (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max OX=3847 GN=CAB3 PE=3 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 4.4e-119
Identity = 207/235 (88.09%), Postives = 214/235 (91.06%), Query Frame = 0


Query: 22  GRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPET 81
           GRVSMRK+     SSGSPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDTAGLSADPET
Sbjct: 29  GRVSMRKTVTKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET 88

Query: 82  ------------RWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 141
                       RWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS
Sbjct: 89  FAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 148

Query: 142 LVHAQSILAIWASQVVLMSAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELK 201
           L+HAQSILAIWA+QV+LM AVEGYRIAGGPLGE+TDPIYPGGSFDPLGLADDP+AFAELK
Sbjct: 149 LIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELK 208

Query: 202 VKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 245
           VKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA PVNNNAW+YATNFVPGK
Sbjct: 209 VKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAGPVNNNAWAYATNFVPGK 263

[Close]

BLAST of Sed0011505 vs. ExPASy Swiss-Prot
Match: P07371 (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum OX=3888 GN=AB80 PE=1 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 5.7e-119
Identity = 208/236 (88.14%), Postives = 215/236 (91.10%), Query Frame = 0


Query: 23  RVSMRKSG--KPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPE 82
           R +MRKS   K  +SSGSPWYGPDRVKYLGPFSGESPSYL GEFPGDYGWDTAGLSADPE
Sbjct: 34  RFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE 93

Query: 83  T------------RWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNP 142
           T            RWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNP
Sbjct: 94  TFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNP 153

Query: 143 SLVHAQSILAIWASQVVLMSAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAEL 202
           SLVHAQSILAIWA+QV+LM AVEGYRIAGGPLGE+ DP+YPGGSFDPLGLADDP+AFAEL
Sbjct: 154 SLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAEL 213

Query: 203 KVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 245
           KVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK
Sbjct: 214 KVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 269

[Close]

BLAST of Sed0011505 vs. ExPASy Swiss-Prot
Match: P07369 (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB3C PE=3 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 5.7e-119
Identity = 208/241 (86.31%), Postives = 218/241 (90.46%), Query Frame = 0


Query: 18  INFNGRVSMRKSGKPA--SSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGL 77
           I  NGRV+MRK+   A  +SSGSPWYGPDRVKYLGPFSGESPSYL GEFPGDYGWDTAGL
Sbjct: 27  ITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGL 86

Query: 78  SADPET------------RWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLD 137
           SADPET            RWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFSEGGLD
Sbjct: 87  SADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLD 146

Query: 138 YLGNPSLVHAQSILAIWASQVVLMSAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPD 197
           YLGNPSLVHAQSILAIWA QVVLM AVEGYRIAGGPLGE+ DP+YPGGSFDPLGLADDP+
Sbjct: 147 YLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPE 206

Query: 198 AFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPG 245
           AFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW++ATNFVPG
Sbjct: 207 AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPG 266

[Close]

BLAST of Sed0011505 vs. ExPASy Swiss-Prot
Match: P27492 (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum OX=4097 GN=CAB16 PE=2 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 1.3e-118
Identity = 206/238 (86.55%), Postives = 216/238 (90.76%), Query Frame = 0


Query: 21  NGRVSMRKSGKPAS--SSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSAD 80
           NG+V+MRK+   A   SSGSPWYGPDRVKYLGPFSGESPSYL GEFPGDYGWDTAGLSAD
Sbjct: 29  NGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSAD 88

Query: 81  PET------------RWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLG 140
           PET            RWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFSEGGLDYLG
Sbjct: 89  PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLG 148

Query: 141 NPSLVHAQSILAIWASQVVLMSAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFA 200
           NPSLVHAQSILAIWA QVVLM AVEGYR+AGGPLGE+ DP+YPGGSFDPLGLA+DP+AFA
Sbjct: 149 NPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFA 208

Query: 201 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 245
           ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK
Sbjct: 209 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 266

[Close]

BLAST of Sed0011505 vs. ExPASy TrEMBL
Match: A0A5D3DAB9 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00790 PE=3 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 8.8e-123
Identity = 216/240 (90.00%), Postives = 223/240 (92.92%), Query Frame = 0


Query: 17  NINFNGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLS 76
           ++  NGR+SMRKSGKPA+SSGSPWYGPDRVKYLGPFSGE PSYLKGEFPGDYGWDTAGLS
Sbjct: 26  SVRSNGRISMRKSGKPAASSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLS 85

Query: 77  ADPET------------RWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDY 136
           ADPET            RWAMLGALGCVFPELLSRNGV FGEAVWFKAGSQIFSEGGLDY
Sbjct: 86  ADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVNFGEAVWFKAGSQIFSEGGLDY 145

Query: 137 LGNPSLVHAQSILAIWASQVVLMSAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDA 196
           LGNPSL+HAQSILAIWASQVVLM AVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDP+A
Sbjct: 146 LGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEA 205

Query: 197 FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 245
           FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 206 FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Sed0011505 vs. ExPASy TrEMBL
Match: A0A0A0LCY3 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_3G664560 PE=3 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 8.8e-123
Identity = 216/240 (90.00%), Postives = 224/240 (93.33%), Query Frame = 0


Query: 17  NINFNGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLS 76
           ++  NGRV+MRKSGKPA+SSGSPWYGPDRVKYLGPFSGE PSYLKGEFPGDYGWDTAGLS
Sbjct: 26  SVRSNGRVTMRKSGKPAASSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLS 85

Query: 77  ADPET------------RWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDY 136
           ADPET            RWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDY
Sbjct: 86  ADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDY 145

Query: 137 LGNPSLVHAQSILAIWASQVVLMSAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDA 196
           LGNPSL+HAQSILAIWASQVVLM AVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDP+A
Sbjct: 146 LGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEA 205

Query: 197 FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 245
           F+ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 206 FSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Sed0011505 vs. ExPASy TrEMBL
Match: A0A1S3BHH5 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489893 PE=3 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 8.8e-123
Identity = 216/240 (90.00%), Postives = 223/240 (92.92%), Query Frame = 0


Query: 17  NINFNGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLS 76
           ++  NGR+SMRKSGKPA+SSGSPWYGPDRVKYLGPFSGE PSYLKGEFPGDYGWDTAGLS
Sbjct: 26  SVRSNGRISMRKSGKPAASSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLS 85

Query: 77  ADPET------------RWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDY 136
           ADPET            RWAMLGALGCVFPELLSRNGV FGEAVWFKAGSQIFSEGGLDY
Sbjct: 86  ADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVNFGEAVWFKAGSQIFSEGGLDY 145

Query: 137 LGNPSLVHAQSILAIWASQVVLMSAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDA 196
           LGNPSL+HAQSILAIWASQVVLM AVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDP+A
Sbjct: 146 LGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEA 205

Query: 197 FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 245
           FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 206 FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Sed0011505 vs. ExPASy TrEMBL
Match: A0A6J1KEF6 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111493100 PE=3 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 1.5e-122
Identity = 217/240 (90.42%), Postives = 222/240 (92.50%), Query Frame = 0


Query: 17  NINFNGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLS 76
           ++  NGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDTAGLS
Sbjct: 26  SVRSNGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 85

Query: 77  ADPET------------RWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDY 136
           ADPET            RWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDY
Sbjct: 86  ADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDY 145

Query: 137 LGNPSLVHAQSILAIWASQVVLMSAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDA 196
           LGNPSLVHAQSILAIWA Q+VLM AVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDP+A
Sbjct: 146 LGNPSLVHAQSILAIWACQIVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEA 205

Query: 197 FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 245
           FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 206 FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Sed0011505 vs. ExPASy TrEMBL
Match: A0A6J1GAK0 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111452433 PE=3 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 2.6e-122
Identity = 217/240 (90.42%), Postives = 222/240 (92.50%), Query Frame = 0


Query: 17  NINFNGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLS 76
           ++  NGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDTAGLS
Sbjct: 26  SVRSNGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 85

Query: 77  ADPET------------RWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDY 136
           ADPET            RWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDY
Sbjct: 86  ADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDY 145

Query: 137 LGNPSLVHAQSILAIWASQVVLMSAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDA 196
           LGNPSLVHAQSILAIWA QVVLM AVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDP+A
Sbjct: 146 LGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEA 205

Query: 197 FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 245
           FAELKVKELKNGRLAMFSMFG+FVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 206 FAELKVKELKNGRLAMFSMFGYFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Sed0011505 vs. TAIR 10
Match: AT2G34430.1 (light-harvesting chlorophyll-protein complex II subunit B1 )

HSP 1 Score: 412.9 bits (1060), Expect = 1.8e-115
Identity = 199/236 (84.32%), Postives = 211/236 (89.41%), Query Frame = 0


Query: 22  GRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPET 81
           GR++MRK+ KP   SGSPWYG DRVKYLGPFSGE PSYL GEFPGDYGWDTAGLSADPET
Sbjct: 31  GRITMRKASKPTGPSGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET 90

Query: 82  ------------RWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 141
                       RWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPS
Sbjct: 91  FARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPS 150

Query: 142 LVHAQSILAIWASQVVLMSAVEGYRIAG-GPLGEITDPIYPGGSFDPLGLADDPDAFAEL 201
           LVHAQSILAIWA+QV+LM AVEGYR+AG GPLGE  D +YPGGSFDPLGLA DP+AFAEL
Sbjct: 151 LVHAQSILAIWATQVILMGAVEGYRVAGDGPLGEAEDLLYPGGSFDPLGLATDPEAFAEL 210

Query: 202 KVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 245
           KVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW++ATNFVPGK
Sbjct: 211 KVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266

[Close]

BLAST of Sed0011505 vs. TAIR 10
Match: AT1G29910.1 (chlorophyll A/B binding protein 3 )

HSP 1 Score: 409.8 bits (1052), Expect = 1.5e-114
Identity = 200/238 (84.03%), Postives = 213/238 (89.50%), Query Frame = 0


Query: 21  NGRVSMRKS-GKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADP 80
           +GRV+MRK+  KP   SGSPWYG DRVKYLGPFSGESPSYL GEFPGDYGWDTAGLSADP
Sbjct: 30  SGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADP 89

Query: 81  ET------------RWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGN 140
           ET            RWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFS+GGLDYLGN
Sbjct: 90  ETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGN 149

Query: 141 PSLVHAQSILAIWASQVVLMSAVEGYRIAG-GPLGEITDPIYPGGSFDPLGLADDPDAFA 200
           PSLVHAQSILAIWA+QV+LM AVEGYR+AG GPLGE  D +YPGGSFDPLGLA DP+AFA
Sbjct: 150 PSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFA 209

Query: 201 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 245
           ELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNNNAW++ATNFVPGK
Sbjct: 210 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of Sed0011505 vs. TAIR 10
Match: AT1G29920.1 (chlorophyll A/B-binding protein 2 )

HSP 1 Score: 409.8 bits (1052), Expect = 1.5e-114
Identity = 200/238 (84.03%), Postives = 213/238 (89.50%), Query Frame = 0


Query: 21  NGRVSMRKS-GKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADP 80
           +GRV+MRK+  KP   SGSPWYG DRVKYLGPFSGESPSYL GEFPGDYGWDTAGLSADP
Sbjct: 30  SGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADP 89

Query: 81  ET------------RWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGN 140
           ET            RWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFS+GGLDYLGN
Sbjct: 90  ETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGN 149

Query: 141 PSLVHAQSILAIWASQVVLMSAVEGYRIAG-GPLGEITDPIYPGGSFDPLGLADDPDAFA 200
           PSLVHAQSILAIWA+QV+LM AVEGYR+AG GPLGE  D +YPGGSFDPLGLA DP+AFA
Sbjct: 150 PSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFA 209

Query: 201 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 245
           ELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNNNAW++ATNFVPGK
Sbjct: 210 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of Sed0011505 vs. TAIR 10
Match: AT1G29930.1 (chlorophyll A/B binding protein 1 )

HSP 1 Score: 409.8 bits (1052), Expect = 1.5e-114
Identity = 200/238 (84.03%), Postives = 213/238 (89.50%), Query Frame = 0


Query: 21  NGRVSMRKS-GKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADP 80
           +GRV+MRK+  KP   SGSPWYG DRVKYLGPFSGESPSYL GEFPGDYGWDTAGLSADP
Sbjct: 30  SGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADP 89

Query: 81  ET------------RWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGN 140
           ET            RWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFS+GGLDYLGN
Sbjct: 90  ETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGN 149

Query: 141 PSLVHAQSILAIWASQVVLMSAVEGYRIAG-GPLGEITDPIYPGGSFDPLGLADDPDAFA 200
           PSLVHAQSILAIWA+QV+LM AVEGYR+AG GPLGE  D +YPGGSFDPLGLA DP+AFA
Sbjct: 150 PSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFA 209

Query: 201 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 245
           ELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNNNAW++ATNFVPGK
Sbjct: 210 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of Sed0011505 vs. TAIR 10
Match: AT2G34420.1 (photosystem II light harvesting complex gene B1B2 )

HSP 1 Score: 408.7 bits (1049), Expect = 3.3e-114
Identity = 200/238 (84.03%), Postives = 212/238 (89.08%), Query Frame = 0


Query: 21  NGRVSMRKS-GKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADP 80
           +GRV+MRK+  KP   SGSPWYG DRVKYLGPFSGE PSYL GEFPGDYGWDTAGLSADP
Sbjct: 28  SGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP 87

Query: 81  ET------------RWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGN 140
           ET            RWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFS+GGLDYLGN
Sbjct: 88  ETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGN 147

Query: 141 PSLVHAQSILAIWASQVVLMSAVEGYRIAG-GPLGEITDPIYPGGSFDPLGLADDPDAFA 200
           PSLVHAQSILAIWA+QV+LM AVEGYR+AG GPLGE  D +YPGGSFDPLGLA DP+AFA
Sbjct: 148 PSLVHAQSILAIWATQVILMGAVEGYRVAGDGPLGEAEDLLYPGGSFDPLGLATDPEAFA 207

Query: 201 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 245
           ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW++ATNFVPGK
Sbjct: 208 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 265

The following BLAST results are available for this feature:

BLAST of Sed0011505 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447450.1	1.8e-122	90.00	PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo] >...	[more]
XP_004148579.1	1.8e-122	90.00	chlorophyll a-b binding protein of LHCII type 1-like [Cucumis sativus] >KGN58532...	[more]
XP_022998479.1	3.1e-122	90.42	chlorophyll a-b binding protein of LHCII type 1 [Cucurbita maxima]	[more]
XP_038903667.1	5.3e-122	89.58	chlorophyll a-b binding protein of LHCII type 1-like [Benincasa hispida]	[more]
XP_022948926.1	5.3e-122	90.42	chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita moschata] >XP_02...	[more]

BLAST of Sed0011505 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P08221	1.5e-119	87.03	Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cuc...	[more]
P09756	4.4e-119	88.09	Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max OX=3847 GN=CAB3 ...	[more]
P07371	5.7e-119	88.14	Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum OX=3888 GN=...	[more]
P07369	5.7e-119	86.31	Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum OX=408...	[more]
P27492	1.3e-118	86.55	Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum OX=4097 G...	[more]

BLAST of Sed0011505 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DAB9	8.8e-123	90.00	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11...	[more]
A0A0A0LCY3	8.8e-123	90.00	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa...	[more]
A0A1S3BHH5	8.8e-123	90.00	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1KEF6	1.5e-122	90.42	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1GAK0	2.6e-122	90.42	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]

BLAST of Sed0011505 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34430.1	1.8e-115	84.32	light-harvesting chlorophyll-protein complex II subunit B1	[more]
AT1G29910.1	1.5e-114	84.03	chlorophyll A/B binding protein 3	[more]
AT1G29920.1	1.5e-114	84.03	chlorophyll A/B-binding protein 2	[more]
AT1G29930.1	1.5e-114	84.03	chlorophyll A/B binding protein 1	[more]
AT2G34420.1	3.3e-114	84.03	photosystem II light harvesting complex gene B1B2	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 57..210 e-value: 1.0E-36 score: 126.9
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 47..237 e-value: 1.2E-77 score: 262.3
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 20..244
None	No IPR available	PANTHER	PTHR21649:SF97	CHLOROPHYLL A-B BINDING PROTEIN 2, CHLOROPLASTIC	coord: 20..244
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 39..241

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0011505.1	Sed0011505.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding