Sed0011167 (gene) Chayote v1

Overview


Name	Sed0011167
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Transmembrane protein
Location	LG12: 9548008 .. 9560095 (-)
RNA-Seq Expression	Sed0011167
Synteny	Sed0011167

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCCGATTTTCGGGTTTTTTGAACTAGGCTAGTCAATTATCTCGTTTTCTTCCATCGCAGTTGAATGTAGCGCAATTTCCCCTGTTCTAATCGAGAATACGAAACCCGGAAGTTCGGTGCAGAACGAAAATCTTGAGACCGTTCACAGTCGACTATGGGTACTAGAGAGGTCTACGAACAGAAGCTAAGAAGGGGAAATTTGTACCATGAACCCACCATCAATCCAGGGCTGGGATCCCCTCGTTGCCCTCGCTGTTTCTCTCTTCTTAAACCTAACCCTGTAATTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAATTCAATCGGCTTCTTATGTTTGCTCTTATTACTGTTTTCTTGAATTCATGTTTGAATTTTCTTGTGTTTTTGGTTGATTCAGGATAAAAGTGAATGGGCCATCAATCCCGTTCTTCATGGTACCACCGCTGTGGTGAGTTTCGCTCTTTTTCATTTTCCTTTTCCTGTTTAGGTTTTCGATTGTGCAGTTATAAACATGAACCCTATTTTGTGTTCTTTAAATTAGTCTGCTGTAGACTAGTTGATGGGCGTTTCTGGTTCATAAAGTGCAGACTTAAATTCAATTCAGTTCCTCCTGTATCAATTGGATAATCCTAATTCCTATGTAACTCAAGTTATGCGCATGTGTGGACTTTTGTGAAAGTTTGTAGAAATCAAGTTTATGAGTGTTTTTGTGTTGGTTGATATAATTTAATTTACCCCAACCCACCAGTTTAAGCTTTTGGATTGATTGGTGATTCAACATAATTCAACATGGTATTAGGAGGTCTTGAGTTTGATTTGTTTTCATCCCCAATTAAAATTGATTTTCACTCGATAGGCATTCTCAAATTTCTAAGCTCACAAGTGAGGTGGAGTGTTGGTTGGTACAATTTTATTTACTCCAAACTCACCACCGGCTTAAGCTTTTGGTTGATTGATGATTTAACCTAAGTCAACATTTTGTCATTAATATTGTGGCTTCCATGTCTTTTGATTATTCTTGTACTGCCTTGTTTAACAGGCAGGATCGGGTCTTGGTGGGCTTCTTAGTGCAGTCCATGCTTTCAATACGGGTAATCACAATGGAATTTCAATAATGTTTCATGTGGTTGACACAATTGCTTATCGTTTTCTTTCGTTGTAGGGTTCCCATATCTCCAAAGAAATGTGAAGGGACCAAAGTGGCTTCCTTTTGTTGTTGGGGTATGCTTTTTTAAGCCAAATTTTCTTTAGTTTTAGTATTAAATTGTGAAATTGATTTTGTTGTCAATTATCATTGGAGCTGTGTGGATTACTTGATTCTTGTTAGTGTTGTTCCATCTACTAGTTATCTGACTACTTTTCTTTATCTCTATGCTGACAGATGCCTGCTCTATTATTGTGTTCTGGTGCCGGTGCTGCATTTGGAGGTATATTAGCAAGTTGTTTTTGCTTGTTGTCTCATTTAGAAAAGATTGATGTTCTTGATGGCCTCTTCTTTTGTATTTATTTTTTAAAAAACAATTGGTTTCTGGATTGTAATACTCATACAGATAAGGGAAGGACTAGAACAGGCCTTGAAAGTTGAAACTTAGAAAAATTGCAGGAAAAACTTTACAACTAGTAATTAGCAATATAGTAGGATAGATAACTATTTGGAAATAAAGTGGCAAATTACCACTTAACTTTCCTCCCCTTTGTCCTGCTCACCAGTCTCTCCTATCTTCTCAGAAAGGTTTTTTTTTTGTGGAAAAATAAAAGTTCATACCTTGAAGAAAATCCACTAGCGTGGCCCCAAACCACAATCCAGAAGGTGGTCAACCTATTAGAAAACCGATAGTAAAGATAACCATGATCAACGACGAGCCTAATCGAAACCAAAGCCTTAATAAACATGGGATTTAAGCATTTCACACAAGGCCAAAAGAGCTTTGTCGACACCATGATGGTTGGCTTTGAAATTACTTTGGGGGATAATCCTTGGAGCATGAAGGCTATAGAAGTCCGGGACCCTACTAAAGCTAAATAAGGGAGGTTCGAATCCATAATGGAACTAACCTTACCCCGGACTGACCGGACTAACCTCTGAGTAAAGAGCCCTTTGGCCACTAGCTCAACCAATGAGCGAATCGACAAAAAAAGGTTCACCCTTCTTCAAATAAAACACAAACTCTACACCTACAATATTAACTAAATGATAGAAACAAAAAAATCAGAGAAAAAATCCAGCAGTAAAAGAACAGAGTAAACATCACAAAAGAGGTAGTTATGAAAGTTTTAAGCGCTGTGGACCAATACAAAAAATCGGATAATCCAAAGGAAAACTTGGTCCAATTTGTATTTTCAAACCGGTTCAATTGACCAATCAGGTTGGACCCCACCCCAACCGAGTTTGACTGAATCGGTTGAAAGGTTTGAGGTCCAATCCAATCAAACCCACCTAATGACTGCTCTAGAATCCCATGCATGATCCACACGTGACTAGACCTTGAGCCGCTCAAGACTCGGCATCCTTGCCACGTATCAGTATCACTGTCTGACTTTGTTTGGACTTGCGAAGCGATCGTGTGACACTGCTCTAATCCTGAGAGCTAGTCAAACAAACAAAAATGCAAAGCGGGTGGCACAACTGGGCTCAACCTCCATCTCGGGACTTCGAGAAAAGGTTTTCGAAAGAGGGAGAAAGAAGGTTTTGAAATGTTTTTGTCTTTGAAAGTGTTATATAACGCAACAACAAGGACCACTTCAACTCTATTGCATTTGTTATACTTATACATAACTTGGTTAGGTGGCTAGACTAGTCATATCCACTTAATATACATTTTGGGCCATTTTTGATGTGGTAGGTTTGCACATCAAAATAGTAAAGAGATACAATATGCTCACAAAAGAACAAAAAAATTACAACAACATGAAAAGTAAAGGCTATACTATGAAAGCATGATACTAAGGATTTGGAATGGGCATGTGGCCATGTCCCTAGAAAAGCATGACCGTGACACCACGCGTCCTATTGAGTTCCTCTTTTTCACAATGCATGCAGAGTCAACAAAGTCGTTCTCTTATTCGAGACTCTCCGACCACCTCGTGCTACAACAAAATCAGGTTCTTTCTTTTCTGATATATCCTCTTCTTGGGATGTTGGATCTTCGTCTCACAGGATTTGTCGTCTACTACTGTAAGCTTAGTCTCCCTCTTTATTTCACAGCTCGTCCCGAACACTGGAACTCCTCGTTGAACAACTCTCTATTTACTCTCTCTTAGGCCATCGTTGAATTTTCCCCTATTAAAAGACTTCGTCCTTAAGCCCAAAAGCTTCATTCATTTCCATCATTATGTAAAAACCAGAGTTCCTTTTGGCCTTCTGCCAAGAGCCCTGTTTCAGCTCCTTTCCAGTGACTGTCAGAAATCCATTGCGAGGCGACCTAGACTTCAACATCTCACCCTAATCGCACCCATTACCTCGATGGACACCTGACAGTCTACAACAACAAGCCTGGAGATTTTCTCCCTCCGCCAAAGATCGCTCGCTGGAGAAACTCTCCCTAATTCTGGGAGGGAGGCGTATCTCTCTTGGTGAAAGAGAGAGAGAAAACCTCATGCCCCAGAAGAACCCCAAACCTTTGAAGAGAAAGAAGAACTTGCACCACAGAAGCTCTAGAGAATGCCTGCCCTCTCCCAAGAGGAAACCCTAAATGCTCACCGAGGAGCCCAAGAATGCTCACAAAAGGAGCCAAAAAATGGTCACTAAGTAGCCCCAACACGTTCACAACCAAATCTTCAAAGAAGGAATGAAGGAGCCCTATATACAAAATCAAAATGAAGAAGCCGTCCCCAAGGGGTGGCACAGTGGTTGAAGACTTGGGCTTTGAGGGTATGCTCCCCTCAAGATCCTAGGTTTGAGACTTGTGACATTACTCCTTTGATGTCTCCCGGTGCCTCGCCTAGGGACGGGCGTGGTTACCCTTGTTTCAAAAAAAAAAAAAAAAAAAAAAACTGAAAAAGCCCTGTTTCAGCTCTTTTTAATTTTCATACTTTCTCTCTAACATTCCATATCCAACATTACTTAGGTAAAAAACAAACCATCCTACTTCGGACTTTTCTTGATACAAAATCTCTAAAAAGAGTTTTTTTAATTTTTTTAATTTTTTTTAATTATGGTTTCAATTGGCTCTCCTTTATTGGACAAATCAGATTTTTCCTCTCCAATGCCTCAAACATTTTCTTTGTGAATAGAAATTTGGCTTTGACCAACATAGTTCCAAACCATTTTTAGATAGCATTTTAATCTCCAGTCAAGACCACCATGCCATTTTGATTGCTTCTTCGATGGGCGACGGTAGTGGCCCTAGATGGGTATCTGAAATTCACTAAATAAAACACAATCGAAAATAAATTCTAAGGAACCCTAATTTAAGAATAATTTAACGCACAAATCTAGAAAAAAATCCACAAATTAAAGGTAATGGGTTTGTTGGTTGATATAATTAAATTTACCCTAATCTATCAACTTAGGCTTTTGGATTGATTGGTAGTTTAACATAATTTAACATGATATCAGAGCAGGAGGTCATGAGTTCGAATTGGTGGTTTAACATAATTCAACAGTAACATTTATTAAATTTAGGGGAGGTGATTGCTCAAAATTGAAAGTTTAGGGGGTTAATTACAACATTTATTAAACTTTAAGAGAGGTGATTGCTCAAATGGAAAGTTTAGGGGGTTAGTTGCAACACTTATTAAACTTTATGGGAGATAATTGTTCAAATTGAAAGTTTAGAGGGTTAATTGTTACAAACACCATAATTTAGAGGTGATTTGTGCATTTTTCCCATTAAAAAAAGGTTAAAATACCATTTTGGTCCTTCAACTATCATATTTGTTCCATTTTGGTCCCTAGACTTTCAAAAGTTCAATTTTGGTCCCTCAACTATCTAAAAAGTTTAAAAATGGTCCCTGGTGTTAAAATACTAACAGAAGTTTAATGATGCTCTTCTTCCTTCTTTTTTTCTCTTTTCTCTTCTCCTTTCTCTGTATCACCCCTCCATTACAACATTCCTTCTTTAAAATAAAAATTAAAAAAAAAAAACCTAGAGTCAAATATGATCACTTCCATTTTGTATGCTTCAGATAAATAAAAGCTTTATTTTTTAATTCCAATGGTGACTGATTTCATTAATAAACCTCCATCACTTCTTTCTTACCCGGAAACGAGTACACATTCTTTTCCAATTTCAGATACCCATCGAGGCAAAATTATCACATGTTCTTCATTTTGCTGTTTTTTCCCTCTTAATTCTGTACGGGTTTCGACCCTGTTGGAGATACTCACCTTGTGGCAGTTGTCCCACATTGGAAAGATGAGGATTCTACAACACCTTTATAAGGGATGTAGGTTACTCCCCTCAAAGTTAATTGGTTTTGAGGTGGATCTTCATATTCTCTAATATGGTATCAGAGCTCCATGTGGGTTATTGGTCCCCAAATTTCGATCCGACCCAAGCGGGTAAAAACCTAGGCGGGTAGTTTGGACCCACCCAAGCGGGCATAAGCTTAAGTGGGTATTTGATCCCAAAAAGTTTGGATCCGATCCGACCCATGTGAGTAAGCCAAAGTAGGTATTTCGGTCCATAAATTAGGATCCAATTCAAGATGTCATTTTCCGATATGACGCCATCTTTAGGGGGCATGTTGGAGATACTCACCTTGTGGCAATTGTCCCACATTGGAAAGGTGAGGATTCTACAACACCTTTATAAGAGATATGAGTTACTCCCCTCAAAGGCAATTGGTTTTGAGGTGGAACCACATATTCTCTAATATGGTATCAGAGCCCATAAGGCTCAAACGGATATCGGTCCAATAAAAATGAAATTGAGATCCGATTCAAGATTGGTGAGCCCAAAAGAGGCACCATCTTTGATGGGGCATGCTAGGATCTCACAAATATCCCACATTGGAAAGTGGAAGAGTCCTATAAACATTTATAAGAGATATGAGTTACTCTCCTCATTGCCAATTGGTTTTGAGGTGGAACCCCATATTCTCTAATAGTTACAATTAACCTCATAAACTTTCAATTTGTCATATAATTTTTTTTTCTTTTGAGTTAATAAATTGTTGCTTTTTAATACTTTTTTTTTAAACAACAATTACTTTTTAATACTTAAAAACATACTATATTGTCACTTCAAACCTAGCAAAAAAAATAACACTTACTCCAATTTATATATCTTTCTCCAAATTATTTTAGTATAATAGTACCAACTATTTTATAATTTATTTTAAAGAAAGTTGTTTGGTTTAAAACCTAATTGTTGATTTGATTTGTGATGAAGAAGTTTGATGATTTTATACTAATATTTAATTTTGGAGAATTTGGTTTCTCTAGTGATTTGTGATGAACATGAAGTTTGTTGACCAGAGTTTTTGTCGTATGAGTTTTCTGGAGAGAGGTTCCTTTGTTATTACTTGTCTAATTCACACCAAATTCATTTTCCTTTGACTGTTATCTAAAATAGATATAGGAACAAAAAAAGGTTTAAAGTCTATTCAGCTACAAAAGGTAATTGCAACAGATTCAACATTTTTCATTAATTAACTTCAAGGTTCATCATAGTAGACGTTGAGGTTGTTCAGATTCAACTTCATCAGAGCTTTCTCCGAAGAAAAATTCTAAGAAAGTTGAATTCGAACAACTCAACATCTCCTACGATGAAGCTTGAAGTCAATTAATGAGAAATGTTGGTAGTATTTATACTAAAATAATTTGGAAAAAGCTATATAATTGGAGAAATTTTTATTTTTGTTTGCTGGGTTTGAAGTGACAATATAGTATGTTTATAAGTATTAAAAAGTAAATGGTGTCTAACCTAGAAGCTCAGAGGCTGGTGGTGATAATGGAGGTAAAGTGATTTGACTGTTTGAAGCTGATAGATTCCTCCTTGAATGTTTGAAGCTCAGAGGTAGGGGATTTGAATGTTTGAAGCTCGCCATTTTCCAATCTCAAAAAAAATCTTGGTTAGACTTCATATAGATTTTTTTCCTATTTAAATGTCTTAGCAATTTCTCTTTAAAGAGGTAATAAATGATAAGAACTCTAACCAAGGTTGTAGGGAGATTGGGAAAAGGGCGAAGTACTTCGAATCCTATAAAAAAATTCATCATCACAAATGGAGGGTTTATTGTATTTCTTGGGTCTCTTCCACTAATGGTAGCCATTTTTGCTAAGAGTGTGTAAGGGTACCGATGCCAACCTTCAATAACAAATACTCACAGAATACACCAAATAGAATATAATGGAAATAATGCTGAAAAGAAGATTTATCCTTCAACAACCAGCAGAGTATTTCATTAGCATAACAAAATAGAAAACTACAATATGAAATAGAAAAGGTAACAATGAACCACCTGATGAATTAGAAAGCACCGGAACCTCTCTCTCAAGTCCTATGACTTAACCAAAAAGATGCCTAACCATCCTTACCTCTCTACACATTATTATTTTTTGATAGGAAAGAAAACTTTCATTGATATATGGAAAGTTACGAAAAAAATCCTTCAATATTACAAAAAGCTACTTCAGTGTCATGAGAGTAGATAGACTATAATTTTATGAGAGTAGATAGACTATAATCTTTAAAAGGAGTATACAAGTGAGCCCAGGTCATAGCAAGGTAATTATTAGAATCCAACTGATTCCTTAGCAAGTCTTCCCTTCTCAATGATGCTGTGGTGTCTGGCTTTCCATATAAATCACCAAAAAGCACTGATGATAAGACACCATAAGATATTCTTCTTGTCTATAAAGGGGTGCCCCATGTAGGCTTGATATATTAAATCTTATATCATTCCCGGTCGCGCCATACATCATTTAAACAAGTGAGAAAGTGTCCTAGATTGAGTTTACATCTAGAATCTGCAAGTCACTGAGAGGCTGTATTTGATGACGAATATGAAGCAGCCATTGTTGCCAACTGTGCTGGTAGATGACGCCCCTAATAGGCATGCATGACCCATCCGATGATAACAATCAAGAGGATGATGGCCTAGTTTTCGACAAATATGACATGGAAGATGTCCCTGGTGAGCGACATTTGGGGTTCCACAATTTTTGCCATGATTAGAAATTAGAATGTTGAGTTGCGGCTGTGGAGGAAGAACCAAAATTTCGAGAATGAGAATTGTTGCCAATGCCAGCTTGAGAGAAACAACCATTACCTCGATAATGTCCTTGGCTCCGGGTACTGTTTCTCCCTAACGAGAGCATTGCTGTTGATGAAACCAGATTGTCAGTATTTCTTTGTGCAATGACAAGAGACTATTCTTTAGTCTTTAAAAGAGCAAACAAATGCTTAAAAGAGATTGGATCACATCGCGTGCAAATGGATGTGCGGAAAGCATTGCATTCATTTGGAAGGCCATTCAAAACATAAATGAGGAGTTCCTCATCATCAATCGCTAAATAGTTAATCACGAAGATCTTTGGCACGCTGCAAATACGAGTCAATAGACTCATTAGACTTCTTGGTAAGAGAATGTATAGAAGACCTAATCTATATGATGTGAAATTGGGATATAAAAGAGAAGCAAGTAGGCAATCTATCCTAAGTAGCGTGAGATGTGGTACAACCAACAACCAAAGAAAGAATCGAAGGTGATAGTGTGGTGTTAATCAACACCTTGGTAACTCTATCTTGGGTGATCCAACCACCATAAACCAGATTCACTGTTGTGGTATGGATACCTTCATCATTTCATAGAAATTTCGACGGAAGAGAGGAAGTTTCAGTGACATAACCATCAGGCTTGTGAGCTTTAAGAATAAACAAAATTTGATCACGCCAAAAAGAGTAGTTGTTGGAGTCCAATTTGATGGAGATTAAGTTTCTGATATTTGAAAGAAAGTAGAAGAATCGATAAGATTACCAAACTATTTGTAGTAGCAGGAATAGCTGGCGGAGCAGAAGATGTGGTTGAAGATGACGCCATTGAGATGCAAGAAAGACCCATGAGAAGTAATCCAGGAGATCGAGCAAAGGGACGTAAAATCGCGTAGAAGAAAAAATGACAGATGAAAATTGCTTAGCGAATCGTGAAGATACATAGGACAAAAATTGCAAAAAAAAGGACCAAAAGGGTAAACCCAGCAGAAGCCATACGTTTGTCATGATTCACGCATATGGAAAAAAACCAAAGGATCAGATGACACAAGTCAAAATGCATGATACCATGATAAGTTCTCAAATGATATTATTATTCCAATACACTGAATGAATACAATGGAGGACAAATAGAACTATTTATATAATAGTTCTTTAATTGAATAAATAACCGAAGGTAAAAACTACTTTGACTTCTAACCTAACAATTTTCTAACCATACAATCATACTAACAAACATTTAGTTATAATACTTAATAGCACATTTAAATTATGAAATATTGTGTGATACTTTCTCTCCCTAACACCTCTCTTGTAATGAAACTCTAGTGACACACCATTATCTTCCATGAGTTTTTCTCCTCTTCGGCACTGGGGAGGAGGGAGGATAACTTGTGGGTGCCGTGTATCCCTTCCTTTGGTCCTTCCGATCATTTACCCTCCATCGACAATAGTTTTTTCTTTTTCTTTCATCGACAACCACCTTCCTTCTTTTTTGGTGTTCTCCTTTGTTACAACCTTCATCTTCCTCTAGCACAATGATAGTTCCTTTCTCCCTCTTTGGCACCGTAATATCTTCGACACTTTTTATACTGAAAAACCCTAGCACAACGTTTCTCCTTCGTTCTAACCCAATATTTCTTTTTCCTCTGACACCACATCTTCCGATGCCCTCGTGCTTCTTTTTCGGCCATCTTCCGACAACACTTACTCTAGCCTTCTTCTGGCGATAACAACTCAACATTTTGCTAACAATCGCGACGTGAGCATATGGCATTTTCTTCGACGGTATGATGCTCTCTTGCAGGGACTCTCTCCTATTGAAAATGGATTGTATCATTGGAGATTGGGCATACACGCCATCTTTTGGGTCATCTACGGGGGACATCGACCTCACATAAATCATACATCTTCCTCCTACACTGCATACATCTTCCTCCTACACTGATCATCTTCGTACGACAACAACAAATGCTTCTTCCTTCTTCTTCACTAACCATCTTCAAAAATAGAAGAATGAAACGCAAGCCTACACCCACCTTTATGTTCTTGCTCTCTTTTGAGAGCTCTGTTTGTCTTTTGGTGTATAAGCTTGTATTTATTGGTTTTTTCCTTGGTATTTGCCCTTTGATTGACCATGATATTCCATCTCTTCCTTTCTTACTTATCGCTTGTTTCGATTGGTTCACTGCAATACTTTCACTAATCAATGAAATTGTTATATAAAAATTGGACACAGAATTCTCTTTAACTCAGTTTTTCTTACAAAAATGTTTTTTAGAGCTACGTTTTTTAGTTTTTAAAGTTTGGGTATATATATATTTTTAATAATAAGTAAATAATAAAACAACAAGACACTATGGGAATACTGAGTAGTGCTTATAAGGTTCATTTTAAATTTTAAAAAACCAGAAACAAAATGGTAAGAAAACTTAGCTGTTAGTTAGTGTTGATGAAGGTGATTATAATTGTTTGTTGACATGCAATTTTGCAGGTTTTGCTCTTCCAAAATTTGCTCAACTCACAGTAACATCCTACTATGCCACCTCGAGTGCTTCCCATTATGGAGTTTCGCTTCTCACTCGAAGAATTGAGGAGAATCACACTTCCCGAACTCAGCAAGAAACCAAATGATTTTTCACAGGTCACATAATTTCAAGCACAAGGAACCTTATTTATTATTATTAATTTTTCCTTTCGGAAATTTTGCAAAATCAACTTTGGCTGTAGAGTTAGAACGTTTGATTTGTGCTTGCTATTGTGAAGACACCTGAATATATGTAAATTGCGGAGAGTACCTGTTTGGTGATTCATAATGTGCAAATAATAACGTTATTGATTTCGGTTTCACAACTCCCAACAACCAAGGATTGTTGAGAATTTTGTGATGATAATGAAAATTTATAGCAGTAATGCGATAAATGCAGTAGTTCATTCAAGGCATTATTTTCCTCATCGATGTTTACAGAAAACTAACTTTTGTGATTAGTTTATAGGATTTGTACTTGAAACAAGCAAGAATAGGTGGTATCAAGAGTTGCAATAACTTGGTTCTTGTTTCTTAAAAGAAAAGGTACTTTCTTCTGAATTAGGATTTCTGCTCTAGTAAGCTGTTCAGTTATATGATGAACTGTGTAACGAATTCTTTGAACTTACATATAAGAATAAGGGATTTCCCAGATTCTAGATTGAGACTTAAGACTGTAATTTAGAGAAGTCTGGGTTGCCTCTTCGGCGTTTGCCAACCAGATCTGGTGAATGGTTAACTTTTAAGACACGAGGTGGGCCATTAGAGCTCTTCTTTGACATCTATGGAAGGAATAGGACTTTTGAAGCTTTTAATTCTTTTTGTAACAGTGTACATCATTCGGCTTTTCGGTATTGCTCTATCGACTTAACTTTCACTTAACTTTCGTTTGTAATTACAGCCTTTTGATGACGACGGGAGGACTCTCATTTTGTAGGTTATGGCCGCGCCATGAGTTCACTCTACCTTCGATCCTTAGGTTCTTTTAGAATCATGTCTAGTTTCTTTTCCCGGAAAAGATAGTAATTTTAGAATTTAGCTGTTGGGTTGGGGTACCCTTTGAGCTGGCCAGTGTGAACTGTTGATGGTGCTATAATTGTTGTTAAACATGATGGAGCTGACCCTCTTTTTAGAAGTAAATTCCATTAGGATGCCAAGAGAAAGAATGAATCCTATGGGATGCAATCTAATCCATACTTTCCAACCATGGAGTTGCCTAGTGGTTAAGAGGGTCTTGGAGAACTAAGAGGTGAAGGGTTCAATTCATGATAACTATCTACCTAGAAATTAATCTCTTACGAGTTTTCTTGACTTTCAAATATTGTAATGTCAGATAGTATGTTTCGTGATAATAATTAAGGTGCATGCAAGTTGGTTCAAATAGTCTCAC

mRNA sequence

ATTCCGATTTTCGGGTTTTTTGAACTAGGCTAGTCAATTATCTCGTTTTCTTCCATCGCAGTTGAATGTAGCGCAATTTCCCCTGTTCTAATCGAGAATACGAAACCCGGAAGTTCGGTGCAGAACGAAAATCTTGAGACCGTTCACAGTCGACTATGGGTACTAGAGAGGTCTACGAACAGAAGCTAAGAAGGGGAAATTTGTACCATGAACCCACCATCAATCCAGGGCTGGGATCCCCTCGTTGCCCTCGCTGTTTCTCTCTTCTTAAACCTAACCCTGATAAAAGTGAATGGGCCATCAATCCCGTTCTTCATGGTACCACCGCTGTGGCAGGATCGGGTCTTGGTGGGCTTCTTAGTGCAGTCCATGCTTTCAATACGGGGTTCCCATATCTCCAAAGAAATGTGAAGGGACCAAAGTGGCTTCCTTTTGTTGTTGGGATGCCTGCTCTATTATTGTGTTCTGGTGCCGGTGCTGCATTTGGAGGTTTTGCTCTTCCAAAATTTGCTCAACTCACAGTAACATCCTACTATGCCACCTCGAGTGCTTCCCATTATGGAGTTTCGCTTCTCACTCGAAGAATTGAGGAGAATCACACTTCCCGAACTCAGCAAGAAACCAAATGATTTTTCACAGGTCACATAATTTCAAGCACAAGGAACCTTATTTATTATTATTAATTTTTCCTTTCGGAAATTTTGCAAAATCAACTTTGGCTGTAGAGTTAGAACGTTTGATTTGTGCTTGCTATTGTGAAGACACCTGAATATATGTAAATTGCGGAGAGTACCTGTTTGGTGATTCATAATGTGCAAATAATAACGTTATTGATTTCGGTTTCACAACTCCCAACAACCAAGGATTGTTGAGAATTTTGTGATGATAATGAAAATTTATAGCAGTAATGCGATAAATGCAGTAGTTCATTCAAGGCATTATTTTCCTCATCGATGTTTACAGAAAACTAACTTTTGTGATTAGTTTATAGGATTTGTACTTGAAACAAGCAAGAATAGGTGGTATCAAGAGTTGCAATAACTTGGTTCTTGTTTCTTAAAAGAAAAGGTACTTTCTTCTGAATTAGGATTTCTGCTCTAGTAAGCTGTTCAGTTATATGATGAACTGTGTAACGAATTCTTTGAACTTACATATAAGAATAAGGGATTTCCCAGATTCTAGATTGAGACTTAAGACTGTAATTTAGAGAAGTCTGGGTTGCCTCTTCGGCGTTTGCCAACCAGATCTGGTGAATGGTTAACTTTTAAGACACGAGGTGGGCCATTAGAGCTCTTCTTTGACATCTATGGAAGGAATAGGACTTTTGAAGCTTTTAATTCTTTTTGTAACAGTGTACATCATTCGGCTTTTCGGTATTGCTCTATCGACTTAACTTTCACTTAACTTTCGTTTGTAATTACAGCCTTTTGATGACGACGGGAGGACTCTCATTTTGTAGGTTATGGCCGCGCCATGAGTTCACTCTACCTTCGATCCTTAGGTTCTTTTAGAATCATGTCTAGTTTCTTTTCCCGGAAAAGATAGTAATTTTAGAATTTAGCTGTTGGGTTGGGGTACCCTTTGAGCTGGCCAGTGTGAACTGTTGATGGTGCTATAATTGTTGTTAAACATGATGGAGCTGACCCTCTTTTTAGAAGTAAATTCCATTAGGATGCCAAGAGAAAGAATGAATCCTATGGGATGCAATCTAATCCATACTTTCCAACCATGGAGTTGCCTAGTGGTTAAGAGGGTCTTGGAGAACTAAGAGGTGAAGGGTTCAATTCATGATAACTATCTACCTAGAAATTAATCTCTTACGAGTTTTCTTGACTTTCAAATATTGTAATGTCAGATAGTATGTTTCGTGATAATAATTAAGGTGCATGCAAGTTGGTTCAAATAGTCTCAC

Coding sequence (CDS)

ATGGGTACTAGAGAGGTCTACGAACAGAAGCTAAGAAGGGGAAATTTGTACCATGAACCCACCATCAATCCAGGGCTGGGATCCCCTCGTTGCCCTCGCTGTTTCTCTCTTCTTAAACCTAACCCTGATAAAAGTGAATGGGCCATCAATCCCGTTCTTCATGGTACCACCGCTGTGGCAGGATCGGGTCTTGGTGGGCTTCTTAGTGCAGTCCATGCTTTCAATACGGGGTTCCCATATCTCCAAAGAAATGTGAAGGGACCAAAGTGGCTTCCTTTTGTTGTTGGGATGCCTGCTCTATTATTGTGTTCTGGTGCCGGTGCTGCATTTGGAGGTTTTGCTCTTCCAAAATTTGCTCAACTCACAGTAACATCCTACTATGCCACCTCGAGTGCTTCCCATTATGGAGTTTCGCTTCTCACTCGAAGAATTGAGGAGAATCACACTTCCCGAACTCAGCAAGAAACCAAATGA

Protein sequence

MGTREVYEQKLRRGNLYHEPTINPGLGSPRCPRCFSLLKPNPDKSEWAINPVLHGTTAVAGSGLGGLLSAVHAFNTGFPYLQRNVKGPKWLPFVVGMPALLLCSGAGAAFGGFALPKFAQLTVTSYYATSSASHYGVSLLTRRIEENHTSRTQQETK

Homology

[Close]

BLAST of Sed0011167 vs. NCBI nr
Match: XP_038904167.1 (uncharacterized protein LOC120090522 [Benincasa hispida] >XP_038904168.1 uncharacterized protein LOC120090522 [Benincasa hispida])

HSP 1 Score: 300.1 bits (767), Expect = 1.2e-77
Identity = 141/155 (90.97%), Postives = 151/155 (97.42%), Query Frame = 0


Query: 1   MGTREVYEQKLRRGNLYHEPTINPGLGSPRCPRCFSLLKPNPDKSEWAINPVLHGTTAVA 60
           MGTREVYE+KLRRGNLYHEPT+NPGLGSPRCPRCFSLLKP+PDKSEWAINPVLHG TAVA
Sbjct: 1   MGTREVYEEKLRRGNLYHEPTMNPGLGSPRCPRCFSLLKPDPDKSEWAINPVLHGVTAVA 60

Query: 61  GSGLGGLLSAVHAFNTGFPYLQRNVKGPKWLPFVVGMPALLLCSGAGAAFGGFALPKFAQ 120
           GSGLGGLLSAVHA+NTG P+LQ +VKGPKWLPFV+G+P LLLCSGAGAAFGGFALP+FAQ
Sbjct: 61  GSGLGGLLSAVHAYNTGIPHLQSHVKGPKWLPFVIGVPVLLLCSGAGAAFGGFALPRFAQ 120

Query: 121 LTVTSYYATSSASHYGVSLLTRRIEENHTSRTQQE 156
           LTVTSYYATSSASHYGVSLLTRRIE+NHTSRTQQE
Sbjct: 121 LTVTSYYATSSASHYGVSLLTRRIEDNHTSRTQQE 155

[Close]

BLAST of Sed0011167 vs. NCBI nr
Match: XP_023538973.1 (uncharacterized protein LOC111799746 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 295.8 bits (756), Expect = 2.2e-76
Identity = 139/155 (89.68%), Postives = 149/155 (96.13%), Query Frame = 0


Query: 1   MGTREVYEQKLRRGNLYHEPTINPGLGSPRCPRCFSLLKPNPDKSEWAINPVLHGTTAVA 60
           MGTREVYEQKLRRGNLYHEPT+NPGLGSPRCPRCFSLLKP+PDKSEWAINPVLH TTAVA
Sbjct: 1   MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLLKPDPDKSEWAINPVLHSTTAVA 60

Query: 61  GSGLGGLLSAVHAFNTGFPYLQRNVKGPKWLPFVVGMPALLLCSGAGAAFGGFALPKFAQ 120
           GSGLGGLLSAVHAFNTG P+LQ +VKGPKWLPFV+G+P LLLCSGAGAAFGGFALP+F Q
Sbjct: 61  GSGLGGLLSAVHAFNTGIPHLQNHVKGPKWLPFVIGVPVLLLCSGAGAAFGGFALPRFTQ 120

Query: 121 LTVTSYYATSSASHYGVSLLTRRIEENHTSRTQQE 156
           LTVTSYYATSSASHYGVSLLTRRIE+NHTSRT+ +
Sbjct: 121 LTVTSYYATSSASHYGVSLLTRRIEDNHTSRTRAQ 155

[Close]

BLAST of Sed0011167 vs. NCBI nr
Match: KAG6596664.1 (hypothetical protein SDJN03_09844, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028201.1 hypothetical protein SDJN02_09381 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 293.1 bits (749), Expect = 1.4e-75
Identity = 138/155 (89.03%), Postives = 149/155 (96.13%), Query Frame = 0


Query: 1   MGTREVYEQKLRRGNLYHEPTINPGLGSPRCPRCFSLLKPNPDKSEWAINPVLHGTTAVA 60
           MGTREVYEQKLRRGNLYHEPT+NPGLGSPRCPRCFSLLKP+P+ SEWAINPVLH TTAVA
Sbjct: 1   MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLLKPDPNTSEWAINPVLHSTTAVA 60

Query: 61  GSGLGGLLSAVHAFNTGFPYLQRNVKGPKWLPFVVGMPALLLCSGAGAAFGGFALPKFAQ 120
           GSGLGGLLSAVHAFNTG P+LQ +VKGPKWLPFV+G+P LLLCSGAGAAFGGFALP+FAQ
Sbjct: 61  GSGLGGLLSAVHAFNTGIPHLQNHVKGPKWLPFVIGVPVLLLCSGAGAAFGGFALPRFAQ 120

Query: 121 LTVTSYYATSSASHYGVSLLTRRIEENHTSRTQQE 156
           LTVTSYYATSSASHYGVSLLTRRIE+NHTSRT+ +
Sbjct: 121 LTVTSYYATSSASHYGVSLLTRRIEDNHTSRTRAQ 155

[Close]

BLAST of Sed0011167 vs. NCBI nr
Match: XP_011652076.1 (uncharacterized protein LOC101220824 [Cucumis sativus])

HSP 1 Score: 292.0 bits (746), Expect = 3.1e-75
Identity = 137/152 (90.13%), Postives = 146/152 (96.05%), Query Frame = 0


Query: 1   MGTREVYEQKLRRGNLYHEPTINPGLGSPRCPRCFSLLKPNPDKSEWAINPVLHGTTAVA 60
           MGTREVYEQKLRRGNLYHEPT+NPGLGSPRCPRCFSLLKP+PDKSEWAINPVLHG TAVA
Sbjct: 1   MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLLKPDPDKSEWAINPVLHGVTAVA 60

Query: 61  GSGLGGLLSAVHAFNTGFPYLQRNVKGPKWLPFVVGMPALLLCSGAGAAFGGFALPKFAQ 120
           GSGLGGLLSAVHA+NTG P+LQ +VKGPKWLPFV+G+PALLLCS AGA FGGFALP+F Q
Sbjct: 61  GSGLGGLLSAVHAYNTGIPHLQSHVKGPKWLPFVIGVPALLLCSSAGATFGGFALPRFTQ 120

Query: 121 LTVTSYYATSSASHYGVSLLTRRIEENHTSRT 153
           LTVTSYYATSSASHYGVSLLTRRIE+NHTSRT
Sbjct: 121 LTVTSYYATSSASHYGVSLLTRRIEDNHTSRT 152

[Close]

BLAST of Sed0011167 vs. NCBI nr
Match: XP_022151439.1 (uncharacterized protein LOC111019374 [Momordica charantia])

HSP 1 Score: 290.8 bits (743), Expect = 7.0e-75
Identity = 138/156 (88.46%), Postives = 148/156 (94.87%), Query Frame = 0


Query: 1   MGTREVYEQKLRRGNLYHEPTINPGLGSPRCPRCFSLLKPNPDKSEWAINPVLHGTTAVA 60
           MGTREVYE+KLRRGNLYHEPT+NPGLGSPRCPRCFSLL  +PDKSEWAINPVLH  TAVA
Sbjct: 1   MGTREVYEEKLRRGNLYHEPTMNPGLGSPRCPRCFSLLNSDPDKSEWAINPVLHDATAVA 60

Query: 61  GSGLGGLLSAVHAFNTGFPYLQRNVKGPKWLPFVVGMPALLLCSGAGAAFGGFALPKFAQ 120
           GSGLGG+LSAVHAFNTG P LQ +VKGPKWLPFV+G+P LLLCSGAGAAFGGFALPKFAQ
Sbjct: 61  GSGLGGMLSAVHAFNTGIPRLQSHVKGPKWLPFVIGVPVLLLCSGAGAAFGGFALPKFAQ 120

Query: 121 LTVTSYYATSSASHYGVSLLTRRIEENHTSRTQQET 157
           LTVTSYYATSSASHYGVSLLTR+IEENHTSRT+QE+
Sbjct: 121 LTVTSYYATSSASHYGVSLLTRKIEENHTSRTKQES 156

[Close]

BLAST of Sed0011167 vs. ExPASy TrEMBL
Match: A0A0A0LEC4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G798610 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.5e-75
Identity = 137/152 (90.13%), Postives = 146/152 (96.05%), Query Frame = 0


Query: 1   MGTREVYEQKLRRGNLYHEPTINPGLGSPRCPRCFSLLKPNPDKSEWAINPVLHGTTAVA 60
           MGTREVYEQKLRRGNLYHEPT+NPGLGSPRCPRCFSLLKP+PDKSEWAINPVLHG TAVA
Sbjct: 1   MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLLKPDPDKSEWAINPVLHGVTAVA 60

Query: 61  GSGLGGLLSAVHAFNTGFPYLQRNVKGPKWLPFVVGMPALLLCSGAGAAFGGFALPKFAQ 120
           GSGLGGLLSAVHA+NTG P+LQ +VKGPKWLPFV+G+PALLLCS AGA FGGFALP+F Q
Sbjct: 61  GSGLGGLLSAVHAYNTGIPHLQSHVKGPKWLPFVIGVPALLLCSSAGATFGGFALPRFTQ 120

Query: 121 LTVTSYYATSSASHYGVSLLTRRIEENHTSRT 153
           LTVTSYYATSSASHYGVSLLTRRIE+NHTSRT
Sbjct: 121 LTVTSYYATSSASHYGVSLLTRRIEDNHTSRT 152

[Close]

BLAST of Sed0011167 vs. ExPASy TrEMBL
Match: A0A6J1FZY6 (uncharacterized protein LOC111449402 OS=Cucurbita moschata OX=3662 GN=LOC111449402 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 3.4e-75
Identity = 136/153 (88.89%), Postives = 147/153 (96.08%), Query Frame = 0


Query: 1   MGTREVYEQKLRRGNLYHEPTINPGLGSPRCPRCFSLLKPNPDKSEWAINPVLHGTTAVA 60
           MGTREVYEQKLRRGNLYHEPT+NPGLGSPRCPRCFSLL+P+PD SEWAINPVLH TTAVA
Sbjct: 1   MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLLQPDPDTSEWAINPVLHSTTAVA 60

Query: 61  GSGLGGLLSAVHAFNTGFPYLQRNVKGPKWLPFVVGMPALLLCSGAGAAFGGFALPKFAQ 120
           GSGLGGLLSAVHAFNTG P+LQ +VKGPKWLPFV+G+P LLLCSGAGAAFGGFALP+F Q
Sbjct: 61  GSGLGGLLSAVHAFNTGIPHLQNHVKGPKWLPFVIGVPVLLLCSGAGAAFGGFALPRFTQ 120

Query: 121 LTVTSYYATSSASHYGVSLLTRRIEENHTSRTQ 154
           LTVTSYYATSSASHYGVSLLTRRIE+NHT+RT+
Sbjct: 121 LTVTSYYATSSASHYGVSLLTRRIEDNHTARTR 153

[Close]

BLAST of Sed0011167 vs. ExPASy TrEMBL
Match: A0A6J1DD33 (uncharacterized protein LOC111019374 OS=Momordica charantia OX=3673 GN=LOC111019374 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 3.4e-75
Identity = 138/156 (88.46%), Postives = 148/156 (94.87%), Query Frame = 0


Query: 1   MGTREVYEQKLRRGNLYHEPTINPGLGSPRCPRCFSLLKPNPDKSEWAINPVLHGTTAVA 60
           MGTREVYE+KLRRGNLYHEPT+NPGLGSPRCPRCFSLL  +PDKSEWAINPVLH  TAVA
Sbjct: 1   MGTREVYEEKLRRGNLYHEPTMNPGLGSPRCPRCFSLLNSDPDKSEWAINPVLHDATAVA 60

Query: 61  GSGLGGLLSAVHAFNTGFPYLQRNVKGPKWLPFVVGMPALLLCSGAGAAFGGFALPKFAQ 120
           GSGLGG+LSAVHAFNTG P LQ +VKGPKWLPFV+G+P LLLCSGAGAAFGGFALPKFAQ
Sbjct: 61  GSGLGGMLSAVHAFNTGIPRLQSHVKGPKWLPFVIGVPVLLLCSGAGAAFGGFALPKFAQ 120

Query: 121 LTVTSYYATSSASHYGVSLLTRRIEENHTSRTQQET 157
           LTVTSYYATSSASHYGVSLLTR+IEENHTSRT+QE+
Sbjct: 121 LTVTSYYATSSASHYGVSLLTRKIEENHTSRTKQES 156

[Close]

BLAST of Sed0011167 vs. ExPASy TrEMBL
Match: A0A6J1L0N8 (uncharacterized protein LOC111498779 OS=Cucurbita maxima OX=3661 GN=LOC111498779 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 7.5e-75
Identity = 136/155 (87.74%), Postives = 146/155 (94.19%), Query Frame = 0


Query: 1   MGTREVYEQKLRRGNLYHEPTINPGLGSPRCPRCFSLLKPNPDKSEWAINPVLHGTTAVA 60
           MGTREVYEQKLRRGNLYHEPT+NPGLGSPRCPRCFSLLKP+PD SEWAINPVLH TTAVA
Sbjct: 1   MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLLKPDPDTSEWAINPVLHSTTAVA 60

Query: 61  GSGLGGLLSAVHAFNTGFPYLQRNVKGPKWLPFVVGMPALLLCSGAGAAFGGFALPKFAQ 120
           GSGLGGLLSAVHAFNTG P+LQ +VKGPKWLPF++G+P LLLCSGAGAAFGGF LP+F Q
Sbjct: 61  GSGLGGLLSAVHAFNTGIPHLQNHVKGPKWLPFLIGVPVLLLCSGAGAAFGGFVLPRFTQ 120

Query: 121 LTVTSYYATSSASHYGVSLLTRRIEENHTSRTQQE 156
           LTVTSYYATSSASHYGVSLLTRRIEENH SRT+ +
Sbjct: 121 LTVTSYYATSSASHYGVSLLTRRIEENHMSRTRAQ 155

[Close]

BLAST of Sed0011167 vs. ExPASy TrEMBL
Match: A0A1S3B6K8 (uncharacterized protein LOC103486742 OS=Cucumis melo OX=3656 GN=LOC103486742 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 7.1e-73
Identity = 133/154 (86.36%), Postives = 143/154 (92.86%), Query Frame = 0


Query: 1   MGTREVYEQKLRRGNLYHEPTINPGLGSPRCPRCFSLLKPNPDKSEWAINPVLHGTTAVA 60
           MGTREVYEQKLR GNLYHEPT+NPGLGSPRCPRCFSLLKP+PDKSEWA+NPVLH  TAVA
Sbjct: 1   MGTREVYEQKLRSGNLYHEPTMNPGLGSPRCPRCFSLLKPDPDKSEWAVNPVLHDVTAVA 60

Query: 61  GSGLGGLLSAVHAFNTGFPYLQRNVKGPKWLPFVVGMPALLLCSGAGAAFGGFALPKFAQ 120
           GSGLGGLLSAVHA+NTG P+L   VKGPKWLPFV+G+PALLLCS AGA FGGF LP+F Q
Sbjct: 61  GSGLGGLLSAVHAYNTGIPHLLSYVKGPKWLPFVIGVPALLLCSSAGATFGGFVLPRFTQ 120

Query: 121 LTVTSYYATSSASHYGVSLLTRRIEENHTSRTQQ 155
           LTVTSYYATSSASHYGVSLLTRRIE+NHTS+TQQ
Sbjct: 121 LTVTSYYATSSASHYGVSLLTRRIEDNHTSQTQQ 154

[Close]

BLAST of Sed0011167 vs. TAIR 10
Match: AT2G41945.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04040.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 241.9 bits (616), Expect = 3.5e-64
Identity = 116/155 (74.84%), Postives = 131/155 (84.52%), Query Frame = 0


Query: 1   MGTREVYEQKLRRGNLYHEPTINPGLGSPRCPRCFSLLKPNPDKSEWAINPVLHGTTAVA 60
           MGTR+VYE+KLRRGNL ++PT+NPGLGS RCPRC SLL PN +K EW I PVLH   AVA
Sbjct: 1   MGTRQVYEEKLRRGNLDYDPTMNPGLGSARCPRCLSLLNPNSEKGEWTITPVLHDAAAVA 60

Query: 61  GSGLGGLLSAVHAFNTGFPYLQRNVKGPKWLPFVVGMPALLLCSGAGAAFGGFALPKFAQ 120
           GSG+GGLLSAVHAFNTG PYLQ    G K L F+VG+P LL+ SG GAAFGG+ALPKFAQ
Sbjct: 61  GSGIGGLLSAVHAFNTGIPYLQNRFSGSKRLSFLVGVPLLLVYSGVGAAFGGYALPKFAQ 120

Query: 121 LTVTSYYATSSASHYGVSLLTRRIEENHTSRTQQE 156
           LTVTSYYA+SSASHYG+S+LTRRIEE H SRTQ+E
Sbjct: 121 LTVTSYYASSSASHYGISMLTRRIEEAHLSRTQKE 155

[Close]

BLAST of Sed0011167 vs. TAIR 10
Match: AT2G41945.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04040.1); Has 57 Blast hits to 57 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 241.9 bits (616), Expect = 3.5e-64
Identity = 116/155 (74.84%), Postives = 131/155 (84.52%), Query Frame = 0


Query: 1   MGTREVYEQKLRRGNLYHEPTINPGLGSPRCPRCFSLLKPNPDKSEWAINPVLHGTTAVA 60
           MGTR+VYE+KLRRGNL ++PT+NPGLGS RCPRC SLL PN +K EW I PVLH   AVA
Sbjct: 1   MGTRQVYEEKLRRGNLDYDPTMNPGLGSARCPRCLSLLNPNSEKGEWTITPVLHDAAAVA 60

Query: 61  GSGLGGLLSAVHAFNTGFPYLQRNVKGPKWLPFVVGMPALLLCSGAGAAFGGFALPKFAQ 120
           GSG+GGLLSAVHAFNTG PYLQ    G K L F+VG+P LL+ SG GAAFGG+ALPKFAQ
Sbjct: 61  GSGIGGLLSAVHAFNTGIPYLQNRFSGSKRLSFLVGVPLLLVYSGVGAAFGGYALPKFAQ 120

Query: 121 LTVTSYYATSSASHYGVSLLTRRIEENHTSRTQQE 156
           LTVTSYYA+SSASHYG+S+LTRRIEE H SRTQ+E
Sbjct: 121 LTVTSYYASSSASHYGISMLTRRIEEAHLSRTQKE 155

[Close]

BLAST of Sed0011167 vs. TAIR 10
Match: AT2G41945.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18250.1); Has 57 Blast hits to 57 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 223.0 bits (567), Expect = 1.7e-58
Identity = 116/193 (60.10%), Postives = 131/193 (67.88%), Query Frame = 0


Query: 1   MGTREVYEQKLRRGNLYHEPTINPGLGSPRCPRCFSLLKPNPDKSEWAINPVLHGTTAVA 60
           MGTR+VYE+KLRRGNL ++PT+NPGLGS RCPRC SLL PN +K EW I PVLH   AVA
Sbjct: 1   MGTRQVYEEKLRRGNLDYDPTMNPGLGSARCPRCLSLLNPNSEKGEWTITPVLHDAAAVA 60

Query: 61  GSGLGGLLSAVHAFNTGFPYLQRNVKGPKWLPFVVGMPALLLCSGAGAAFG--------- 120
           GSG+GGLLSAVHAFNTG PYLQ    G K L F+VG+P LL+ SG GAAFG         
Sbjct: 61  GSGIGGLLSAVHAFNTGIPYLQNRFSGSKRLSFLVGVPLLLVYSGVGAAFGESLQAAISF 120

Query: 121 -----------------------------GFALPKFAQLTVTSYYATSSASHYGVSLLTR 156
                                        G+ALPKFAQLTVTSYYA+SSASHYG+S+LTR
Sbjct: 121 PIVWLEYESRCAAQCRIATFTFSLLFDVPGYALPKFAQLTVTSYYASSSASHYGISMLTR 180

[Close]

BLAST of Sed0011167 vs. TAIR 10
Match: AT3G04040.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18250.1); Has 58 Blast hits to 58 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 78.2 bits (191), Expect = 6.6e-15
Identity = 38/104 (36.54%), Postives = 59/104 (56.73%), Query Frame = 0


Query: 30  RCPRCFSLLKPNPDKSEWAINPVLHGTTAVAGSGLGGLLSAVHAFNTGFPYLQRNVKGPK 89
           RC  C   L  N + +EW + P +  + ++ GS +GG  SA   F+   P +++ +KGP 
Sbjct: 15  RCHHCAGPLTKNLETNEWTVAPFIRDSFSMIGSAVGGTASAFIGFHHVMPIVRKWIKGPM 74

Query: 90  WLPFVVGMPALLLCSGAGAAFGGFALPKFAQLTVTSYYATSSAS 134
           WL F+VG P +++ S A A   G A+P  AQL  +SY+A   +S
Sbjct: 75  WLHFLVGAPPVIVVSSACAGLAGGAVPALAQLASSSYHAAVHSS 118

[Close]

BLAST of Sed0011167 vs. TAIR 10
Match: AT5G18250.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 78.2 bits (191), Expect = 6.6e-15
Identity = 40/121 (33.06%), Postives = 66/121 (54.55%), Query Frame = 0


Query: 30  RCPRCFSLLKPNPDKSEWAINPVLHGTTAVAGSGLGGLLSAVHAFNTGFPYLQRNVKGPK 89
           RC  C   L  N + S+W ++P +  + ++ GS +GG  SA   FN   P +++ +KGP 
Sbjct: 11  RCHHCAGPLTRNLETSKWTVDPFIRDSFSMIGSAVGGTASAFIGFNHAMPIVRKWIKGPM 70

Query: 90  WLPFVVGMPALLLCSGAGAAFGGFALPKFAQLTVTSYYATSSASHYGVSLLTRRIEENHT 149
           WL F+VG P +++ S A A   G  +P  AQL  +SY A   +S    +    +++++ T
Sbjct: 71  WLHFLVGAPPVIVLSSACAGLAGGTVPALAQLASSSYRAAVHSSQPPQAQKDNKMQKSTT 130

Query: 150 S 151
           S
Sbjct: 131 S 131

The following BLAST results are available for this feature:

BLAST of Sed0011167 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904167.1	1.2e-77	90.97	uncharacterized protein LOC120090522 [Benincasa hispida] >XP_038904168.1 unchara...	[more]
XP_023538973.1	2.2e-76	89.68	uncharacterized protein LOC111799746 [Cucurbita pepo subsp. pepo]	[more]
KAG6596664.1	1.4e-75	89.03	hypothetical protein SDJN03_09844, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_011652076.1	3.1e-75	90.13	uncharacterized protein LOC101220824 [Cucumis sativus]	[more]
XP_022151439.1	7.0e-75	88.46	uncharacterized protein LOC111019374 [Momordica charantia]	[more]

BLAST of Sed0011167 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0011167 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEC4	1.5e-75	90.13	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G798610 PE=4 SV=1	[more]
A0A6J1FZY6	3.4e-75	88.89	uncharacterized protein LOC111449402 OS=Cucurbita moschata OX=3662 GN=LOC1114494...	[more]
A0A6J1DD33	3.4e-75	88.46	uncharacterized protein LOC111019374 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A6J1L0N8	7.5e-75	87.74	uncharacterized protein LOC111498779 OS=Cucurbita maxima OX=3661 GN=LOC111498779...	[more]
A0A1S3B6K8	7.1e-73	86.36	uncharacterized protein LOC103486742 OS=Cucumis melo OX=3656 GN=LOC103486742 PE=...	[more]

BLAST of Sed0011167 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G41945.1	3.5e-64	74.84	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G41945.2	3.5e-64	74.84	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G41945.3	1.7e-58	60.10	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G04040.1	6.6e-15	36.54	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G18250.1	6.6e-15	33.06	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34459	OS01G0264500 PROTEIN	coord: 1..155
None	No IPR available	PANTHER	PTHR34459:SF2	TRANSMEMBRANE PROTEIN	coord: 1..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0011167.1	Sed0011167.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0010431	seed maturation
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus