Homology
BLAST of Sed0008978 vs. NCBI nr
Match:
XP_038894464.1 (pentatricopeptide repeat-containing protein At2g13600-like isoform X2 [Benincasa hispida])
HSP 1 Score: 1316.2 bits (3405), Expect = 0.0e+00
Identity = 627/717 (87.45%), Postives = 677/717 (94.42%), Query Frame = 0
Query: 2 ACSNLGYARIALQLHGLIEKYGIGNNEAVQNSVIDMYVKCGSVYAAEEVFLRIEKPSLFS 61
ACS++GY RIALQLHGL EKYG GNN+A+QNS+IDMY+KCG++YAAE+VFLRIEKPSLFS
Sbjct: 55 ACSSVGYVRIALQLHGLSEKYGFGNNKAIQNSIIDMYIKCGAIYAAEQVFLRIEKPSLFS 114
Query: 62 WNSMIYGYSKLQKVGKALDTFIQMPERDSVSWNTIISAFSQHGLHTQSLSMFVEMWIQDC 121
WNSMIYGYSKL ++G+A DTFIQMPERDSVSWNTIIS+FSQHGLHTQSL FVEMWIQDC
Sbjct: 115 WNSMIYGYSKLHEMGRAFDTFIQMPERDSVSWNTIISSFSQHGLHTQSLGTFVEMWIQDC 174
Query: 122 QPNPMTYASVLSACANIYDLQWGKHLHARIVRFEPFLDVLVGNGLVDMYAKCGLIEASKK 181
QPNPMTYASVLSACANI D QWGKHLHARIVR EPFLDVLVGNGLVDMYAKCGLIEASK+
Sbjct: 175 QPNPMTYASVLSACANICDFQWGKHLHARIVRIEPFLDVLVGNGLVDMYAKCGLIEASKR 234
Query: 182 VFNLLTKRNVVTWTSLISGIVQFGSREEVYDIFYRMREDCVAMDDFILATILGVCEGEEN 241
VFN LT+RNVVTWTSLISGI QFGS+EEVYDIFY+MREDCV MDDFILATILGVCEGE+N
Sbjct: 235 VFNSLTERNVVTWTSLISGIAQFGSQEEVYDIFYQMREDCVTMDDFILATILGVCEGEKN 294
Query: 242 ISIGEQLHAFTVKAGMNSSVPVGNATVSMYAKCGEIGKASLAFESMAARDVISWTTMITA 301
ISIGEQLH FTVK GMNSSVPVGNAT++MYAKCG++ KASLAFE+MAA+DVISWTTMIT+
Sbjct: 295 ISIGEQLHGFTVKTGMNSSVPVGNATLTMYAKCGDVEKASLAFETMAAQDVISWTTMITS 354
Query: 302 FTHNGDVQKAQDYFDRMPARNVISWNSMLGAYFQNGFWEEGLKLYILMLRQEVRPDWITF 361
FTH+G+V++A+DYFDRMP RNVISWN+MLGAYFQNGFWEEGLKLYILMLRQEVRPDWITF
Sbjct: 355 FTHSGNVERARDYFDRMPERNVISWNAMLGAYFQNGFWEEGLKLYILMLRQEVRPDWITF 414
Query: 362 VTTIRACSELAIAKLGTQIVSQVVKAGLGSDVSVANSAITLYSRCGNIEEAQTIFDSIQE 421
VTTI ACSELAI+KLGTQIVSQ VK GLGSDVSVANS ITLYSRCG IEEAQ IFDSIQE
Sbjct: 415 VTTISACSELAISKLGTQIVSQAVKVGLGSDVSVANSVITLYSRCGRIEEAQKIFDSIQE 474
Query: 422 KNLISWNSIMGGYAQNGLGREVIEVFQNMLMVGCKPDHITFVAVLSGCSHSGLVEEAKHY 481
KNLISWNSIMGGYAQNG GR+VIEVFQNMLMVGC+PDHIT+VA+LSGCSHSGLV+EAKHY
Sbjct: 475 KNLISWNSIMGGYAQNGEGRKVIEVFQNMLMVGCRPDHITYVAILSGCSHSGLVKEAKHY 534
Query: 482 FNSMTRDFSISATPEHFACMVDLFGRAGLLKQAMDVIDQMPFTPNVAIWGALLSASRIHH 541
FNSMT+DF ISAT EHF CMVDLFGRAGLLK A+D+IDQMPF PN IWGALLSA RIH
Sbjct: 535 FNSMTKDFGISATLEHFVCMVDLFGRAGLLKPALDLIDQMPFKPNATIWGALLSACRIHR 594
Query: 542 DTEMAELAVKNLLALNTENSESYILLANVYSSTGRLECVSDVRQVMREKGVQKDPGCSWI 601
DTEMAELA+KNLL LNTEN ESYILLANVYSS+GRLECVSDVRQVMREKGVQKDPGCSWI
Sbjct: 595 DTEMAELAMKNLLELNTENFESYILLANVYSSSGRLECVSDVRQVMREKGVQKDPGCSWI 654
Query: 602 EVCNRVHVFTVNDTDHPLIKDIYKALEDIVKKIKDDHGYVDASSSIGYHSEKLAIAFGLI 661
EV NRVHVFTVNDT HP IKDIYKALEDI+KKIKDD+GYVD SSS+GYHSEKLAIAFGLI
Sbjct: 655 EVSNRVHVFTVNDTSHPQIKDIYKALEDIIKKIKDDYGYVDGSSSVGYHSEKLAIAFGLI 714
Query: 662 SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHLKDGICSCGDYW 719
SLPDWMPI+VMKNLRVCNDCHQVMKLISLV+MRKLV+RDGHRFHHL++G CSCGDYW
Sbjct: 715 SLPDWMPIYVMKNLRVCNDCHQVMKLISLVAMRKLVMRDGHRFHHLQNGSCSCGDYW 771
BLAST of Sed0008978 vs. NCBI nr
Match:
XP_038894463.1 (pentatricopeptide repeat-containing protein At2g13600-like isoform X1 [Benincasa hispida])
HSP 1 Score: 1316.2 bits (3405), Expect = 0.0e+00
Identity = 627/717 (87.45%), Postives = 677/717 (94.42%), Query Frame = 0
Query: 2 ACSNLGYARIALQLHGLIEKYGIGNNEAVQNSVIDMYVKCGSVYAAEEVFLRIEKPSLFS 61
ACS++GY RIALQLHGL EKYG GNN+A+QNS+IDMY+KCG++YAAE+VFLRIEKPSLFS
Sbjct: 202 ACSSVGYVRIALQLHGLSEKYGFGNNKAIQNSIIDMYIKCGAIYAAEQVFLRIEKPSLFS 261
Query: 62 WNSMIYGYSKLQKVGKALDTFIQMPERDSVSWNTIISAFSQHGLHTQSLSMFVEMWIQDC 121
WNSMIYGYSKL ++G+A DTFIQMPERDSVSWNTIIS+FSQHGLHTQSL FVEMWIQDC
Sbjct: 262 WNSMIYGYSKLHEMGRAFDTFIQMPERDSVSWNTIISSFSQHGLHTQSLGTFVEMWIQDC 321
Query: 122 QPNPMTYASVLSACANIYDLQWGKHLHARIVRFEPFLDVLVGNGLVDMYAKCGLIEASKK 181
QPNPMTYASVLSACANI D QWGKHLHARIVR EPFLDVLVGNGLVDMYAKCGLIEASK+
Sbjct: 322 QPNPMTYASVLSACANICDFQWGKHLHARIVRIEPFLDVLVGNGLVDMYAKCGLIEASKR 381
Query: 182 VFNLLTKRNVVTWTSLISGIVQFGSREEVYDIFYRMREDCVAMDDFILATILGVCEGEEN 241
VFN LT+RNVVTWTSLISGI QFGS+EEVYDIFY+MREDCV MDDFILATILGVCEGE+N
Sbjct: 382 VFNSLTERNVVTWTSLISGIAQFGSQEEVYDIFYQMREDCVTMDDFILATILGVCEGEKN 441
Query: 242 ISIGEQLHAFTVKAGMNSSVPVGNATVSMYAKCGEIGKASLAFESMAARDVISWTTMITA 301
ISIGEQLH FTVK GMNSSVPVGNAT++MYAKCG++ KASLAFE+MAA+DVISWTTMIT+
Sbjct: 442 ISIGEQLHGFTVKTGMNSSVPVGNATLTMYAKCGDVEKASLAFETMAAQDVISWTTMITS 501
Query: 302 FTHNGDVQKAQDYFDRMPARNVISWNSMLGAYFQNGFWEEGLKLYILMLRQEVRPDWITF 361
FTH+G+V++A+DYFDRMP RNVISWN+MLGAYFQNGFWEEGLKLYILMLRQEVRPDWITF
Sbjct: 502 FTHSGNVERARDYFDRMPERNVISWNAMLGAYFQNGFWEEGLKLYILMLRQEVRPDWITF 561
Query: 362 VTTIRACSELAIAKLGTQIVSQVVKAGLGSDVSVANSAITLYSRCGNIEEAQTIFDSIQE 421
VTTI ACSELAI+KLGTQIVSQ VK GLGSDVSVANS ITLYSRCG IEEAQ IFDSIQE
Sbjct: 562 VTTISACSELAISKLGTQIVSQAVKVGLGSDVSVANSVITLYSRCGRIEEAQKIFDSIQE 621
Query: 422 KNLISWNSIMGGYAQNGLGREVIEVFQNMLMVGCKPDHITFVAVLSGCSHSGLVEEAKHY 481
KNLISWNSIMGGYAQNG GR+VIEVFQNMLMVGC+PDHIT+VA+LSGCSHSGLV+EAKHY
Sbjct: 622 KNLISWNSIMGGYAQNGEGRKVIEVFQNMLMVGCRPDHITYVAILSGCSHSGLVKEAKHY 681
Query: 482 FNSMTRDFSISATPEHFACMVDLFGRAGLLKQAMDVIDQMPFTPNVAIWGALLSASRIHH 541
FNSMT+DF ISAT EHF CMVDLFGRAGLLK A+D+IDQMPF PN IWGALLSA RIH
Sbjct: 682 FNSMTKDFGISATLEHFVCMVDLFGRAGLLKPALDLIDQMPFKPNATIWGALLSACRIHR 741
Query: 542 DTEMAELAVKNLLALNTENSESYILLANVYSSTGRLECVSDVRQVMREKGVQKDPGCSWI 601
DTEMAELA+KNLL LNTEN ESYILLANVYSS+GRLECVSDVRQVMREKGVQKDPGCSWI
Sbjct: 742 DTEMAELAMKNLLELNTENFESYILLANVYSSSGRLECVSDVRQVMREKGVQKDPGCSWI 801
Query: 602 EVCNRVHVFTVNDTDHPLIKDIYKALEDIVKKIKDDHGYVDASSSIGYHSEKLAIAFGLI 661
EV NRVHVFTVNDT HP IKDIYKALEDI+KKIKDD+GYVD SSS+GYHSEKLAIAFGLI
Sbjct: 802 EVSNRVHVFTVNDTSHPQIKDIYKALEDIIKKIKDDYGYVDGSSSVGYHSEKLAIAFGLI 861
Query: 662 SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHLKDGICSCGDYW 719
SLPDWMPI+VMKNLRVCNDCHQVMKLISLV+MRKLV+RDGHRFHHL++G CSCGDYW
Sbjct: 862 SLPDWMPIYVMKNLRVCNDCHQVMKLISLVAMRKLVMRDGHRFHHLQNGSCSCGDYW 918
BLAST of Sed0008978 vs. NCBI nr
Match:
XP_023520697.1 (pentatricopeptide repeat-containing protein At2g13600-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023520698.1 pentatricopeptide repeat-containing protein At2g13600-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023520699.1 pentatricopeptide repeat-containing protein At2g13600-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023520700.1 pentatricopeptide repeat-containing protein At2g13600-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023520701.1 pentatricopeptide repeat-containing protein At2g13600-like isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1315.4 bits (3403), Expect = 0.0e+00
Identity = 626/717 (87.31%), Postives = 677/717 (94.42%), Query Frame = 0
Query: 2 ACSNLGYARIALQLHGLIEKYGIGNNEAVQNSVIDMYVKCGSVYAAEEVFLRIEKPSLFS 61
ACS++GY RIALQLHGL KYGIGNNEA+QNSVIDMYVKCG++YAAE+VFLRIEKPSLFS
Sbjct: 202 ACSSVGYLRIALQLHGLSVKYGIGNNEAIQNSVIDMYVKCGAIYAAEQVFLRIEKPSLFS 261
Query: 62 WNSMIYGYSKLQKVGKALDTFIQMPERDSVSWNTIISAFSQHGLHTQSLSMFVEMWIQDC 121
WNSMIYGYSKL ++G+ALDTF++MPE DSVSWNTIISAFSQHGLHT+SLS FVEMWI DC
Sbjct: 262 WNSMIYGYSKLHEMGRALDTFMKMPEHDSVSWNTIISAFSQHGLHTRSLSTFVEMWIHDC 321
Query: 122 QPNPMTYASVLSACANIYDLQWGKHLHARIVRFEPFLDVLVGNGLVDMYAKCGLIEASKK 181
QPN MTYASVLSACANIYD QWGKHLHARIVR EPFLDVLVGNGLVDMYAKCGLIEASK+
Sbjct: 322 QPNSMTYASVLSACANIYDFQWGKHLHARIVRIEPFLDVLVGNGLVDMYAKCGLIEASKR 381
Query: 182 VFNLLTKRNVVTWTSLISGIVQFGSREEVYDIFYRMREDCVAMDDFILATILGVCEGEEN 241
VFN LT+RNVVTWTSLISGI QFGS+EEVYDIFYRMREDCV MDDFILATILGVCEGEEN
Sbjct: 382 VFNSLTERNVVTWTSLISGIAQFGSQEEVYDIFYRMREDCVIMDDFILATILGVCEGEEN 441
Query: 242 ISIGEQLHAFTVKAGMNSSVPVGNATVSMYAKCGEIGKASLAFESMAARDVISWTTMITA 301
ISIGEQLH F VK GM+SS+PVGNAT++MYAKCG++ KASLAFE+MAARDVISWTTMIT+
Sbjct: 442 ISIGEQLHGFAVKTGMDSSLPVGNATLTMYAKCGDVEKASLAFETMAARDVISWTTMITS 501
Query: 302 FTHNGDVQKAQDYFDRMPARNVISWNSMLGAYFQNGFWEEGLKLYILMLRQEVRPDWITF 361
FT NG+V++AQDYFDRMP RNV+SWNSML AYFQNGFWEEGLKLYI MLRQEVRPDW+TF
Sbjct: 502 FTRNGNVERAQDYFDRMPERNVVSWNSMLSAYFQNGFWEEGLKLYICMLRQEVRPDWVTF 561
Query: 362 VTTIRACSELAIAKLGTQIVSQVVKAGLGSDVSVANSAITLYSRCGNIEEAQTIFDSIQE 421
VTTI +CSELAI+KLGTQI+SQ V+ GLGSDVSVANSAITLYSRCG IE+A +FDSI+E
Sbjct: 562 VTTISSCSELAISKLGTQIISQAVRVGLGSDVSVANSAITLYSRCGKIEDAHKVFDSIRE 621
Query: 422 KNLISWNSIMGGYAQNGLGREVIEVFQNMLMVGCKPDHITFVAVLSGCSHSGLVEEAKHY 481
KNLISWNSIMGGYAQNG GR+VIE+FQNMLMVGCKPDHITFVA+LSGCSHSGLV+EAKHY
Sbjct: 622 KNLISWNSIMGGYAQNGQGRKVIELFQNMLMVGCKPDHITFVAILSGCSHSGLVKEAKHY 681
Query: 482 FNSMTRDFSISATPEHFACMVDLFGRAGLLKQAMDVIDQMPFTPNVAIWGALLSASRIHH 541
FNSMT+DF ISATPEHFACMVDLFGRAGLLK AMD+IDQMPF PNV IWG LLSA RIHH
Sbjct: 682 FNSMTKDFGISATPEHFACMVDLFGRAGLLKSAMDLIDQMPFKPNVTIWGTLLSACRIHH 741
Query: 542 DTEMAELAVKNLLALNTENSESYILLANVYSSTGRLECVSDVRQVMREKGVQKDPGCSWI 601
DTEMAE+A+KNLL LN E+SESYILLANVYSS+G+LECVSDVRQ+MREKGVQKDPGCSWI
Sbjct: 742 DTEMAEVAMKNLLELNAEHSESYILLANVYSSSGKLECVSDVRQLMREKGVQKDPGCSWI 801
Query: 602 EVCNRVHVFTVNDTDHPLIKDIYKALEDIVKKIKDDHGYVDASSSIGYHSEKLAIAFGLI 661
EV NRVHVFTVNDT+HP IKDIYKALEDIVKKIKDD+GYVDAS SIGYHSEKLAIAFGLI
Sbjct: 802 EVSNRVHVFTVNDTNHPQIKDIYKALEDIVKKIKDDYGYVDASGSIGYHSEKLAIAFGLI 861
Query: 662 SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHLKDGICSCGDYW 719
SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHL++G CSCGDYW
Sbjct: 862 SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHLENGSCSCGDYW 918
BLAST of Sed0008978 vs. NCBI nr
Match:
XP_023520702.1 (pentatricopeptide repeat-containing protein At2g13600-like isoform X2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1315.4 bits (3403), Expect = 0.0e+00
Identity = 626/717 (87.31%), Postives = 677/717 (94.42%), Query Frame = 0
Query: 2 ACSNLGYARIALQLHGLIEKYGIGNNEAVQNSVIDMYVKCGSVYAAEEVFLRIEKPSLFS 61
ACS++GY RIALQLHGL KYGIGNNEA+QNSVIDMYVKCG++YAAE+VFLRIEKPSLFS
Sbjct: 174 ACSSVGYLRIALQLHGLSVKYGIGNNEAIQNSVIDMYVKCGAIYAAEQVFLRIEKPSLFS 233
Query: 62 WNSMIYGYSKLQKVGKALDTFIQMPERDSVSWNTIISAFSQHGLHTQSLSMFVEMWIQDC 121
WNSMIYGYSKL ++G+ALDTF++MPE DSVSWNTIISAFSQHGLHT+SLS FVEMWI DC
Sbjct: 234 WNSMIYGYSKLHEMGRALDTFMKMPEHDSVSWNTIISAFSQHGLHTRSLSTFVEMWIHDC 293
Query: 122 QPNPMTYASVLSACANIYDLQWGKHLHARIVRFEPFLDVLVGNGLVDMYAKCGLIEASKK 181
QPN MTYASVLSACANIYD QWGKHLHARIVR EPFLDVLVGNGLVDMYAKCGLIEASK+
Sbjct: 294 QPNSMTYASVLSACANIYDFQWGKHLHARIVRIEPFLDVLVGNGLVDMYAKCGLIEASKR 353
Query: 182 VFNLLTKRNVVTWTSLISGIVQFGSREEVYDIFYRMREDCVAMDDFILATILGVCEGEEN 241
VFN LT+RNVVTWTSLISGI QFGS+EEVYDIFYRMREDCV MDDFILATILGVCEGEEN
Sbjct: 354 VFNSLTERNVVTWTSLISGIAQFGSQEEVYDIFYRMREDCVIMDDFILATILGVCEGEEN 413
Query: 242 ISIGEQLHAFTVKAGMNSSVPVGNATVSMYAKCGEIGKASLAFESMAARDVISWTTMITA 301
ISIGEQLH F VK GM+SS+PVGNAT++MYAKCG++ KASLAFE+MAARDVISWTTMIT+
Sbjct: 414 ISIGEQLHGFAVKTGMDSSLPVGNATLTMYAKCGDVEKASLAFETMAARDVISWTTMITS 473
Query: 302 FTHNGDVQKAQDYFDRMPARNVISWNSMLGAYFQNGFWEEGLKLYILMLRQEVRPDWITF 361
FT NG+V++AQDYFDRMP RNV+SWNSML AYFQNGFWEEGLKLYI MLRQEVRPDW+TF
Sbjct: 474 FTRNGNVERAQDYFDRMPERNVVSWNSMLSAYFQNGFWEEGLKLYICMLRQEVRPDWVTF 533
Query: 362 VTTIRACSELAIAKLGTQIVSQVVKAGLGSDVSVANSAITLYSRCGNIEEAQTIFDSIQE 421
VTTI +CSELAI+KLGTQI+SQ V+ GLGSDVSVANSAITLYSRCG IE+A +FDSI+E
Sbjct: 534 VTTISSCSELAISKLGTQIISQAVRVGLGSDVSVANSAITLYSRCGKIEDAHKVFDSIRE 593
Query: 422 KNLISWNSIMGGYAQNGLGREVIEVFQNMLMVGCKPDHITFVAVLSGCSHSGLVEEAKHY 481
KNLISWNSIMGGYAQNG GR+VIE+FQNMLMVGCKPDHITFVA+LSGCSHSGLV+EAKHY
Sbjct: 594 KNLISWNSIMGGYAQNGQGRKVIELFQNMLMVGCKPDHITFVAILSGCSHSGLVKEAKHY 653
Query: 482 FNSMTRDFSISATPEHFACMVDLFGRAGLLKQAMDVIDQMPFTPNVAIWGALLSASRIHH 541
FNSMT+DF ISATPEHFACMVDLFGRAGLLK AMD+IDQMPF PNV IWG LLSA RIHH
Sbjct: 654 FNSMTKDFGISATPEHFACMVDLFGRAGLLKSAMDLIDQMPFKPNVTIWGTLLSACRIHH 713
Query: 542 DTEMAELAVKNLLALNTENSESYILLANVYSSTGRLECVSDVRQVMREKGVQKDPGCSWI 601
DTEMAE+A+KNLL LN E+SESYILLANVYSS+G+LECVSDVRQ+MREKGVQKDPGCSWI
Sbjct: 714 DTEMAEVAMKNLLELNAEHSESYILLANVYSSSGKLECVSDVRQLMREKGVQKDPGCSWI 773
Query: 602 EVCNRVHVFTVNDTDHPLIKDIYKALEDIVKKIKDDHGYVDASSSIGYHSEKLAIAFGLI 661
EV NRVHVFTVNDT+HP IKDIYKALEDIVKKIKDD+GYVDAS SIGYHSEKLAIAFGLI
Sbjct: 774 EVSNRVHVFTVNDTNHPQIKDIYKALEDIVKKIKDDYGYVDASGSIGYHSEKLAIAFGLI 833
Query: 662 SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHLKDGICSCGDYW 719
SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHL++G CSCGDYW
Sbjct: 834 SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHLENGSCSCGDYW 890
BLAST of Sed0008978 vs. NCBI nr
Match:
XP_023520703.1 (pentatricopeptide repeat-containing protein At2g13600-like isoform X3 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1315.4 bits (3403), Expect = 0.0e+00
Identity = 626/717 (87.31%), Postives = 677/717 (94.42%), Query Frame = 0
Query: 2 ACSNLGYARIALQLHGLIEKYGIGNNEAVQNSVIDMYVKCGSVYAAEEVFLRIEKPSLFS 61
ACS++GY RIALQLHGL KYGIGNNEA+QNSVIDMYVKCG++YAAE+VFLRIEKPSLFS
Sbjct: 55 ACSSVGYLRIALQLHGLSVKYGIGNNEAIQNSVIDMYVKCGAIYAAEQVFLRIEKPSLFS 114
Query: 62 WNSMIYGYSKLQKVGKALDTFIQMPERDSVSWNTIISAFSQHGLHTQSLSMFVEMWIQDC 121
WNSMIYGYSKL ++G+ALDTF++MPE DSVSWNTIISAFSQHGLHT+SLS FVEMWI DC
Sbjct: 115 WNSMIYGYSKLHEMGRALDTFMKMPEHDSVSWNTIISAFSQHGLHTRSLSTFVEMWIHDC 174
Query: 122 QPNPMTYASVLSACANIYDLQWGKHLHARIVRFEPFLDVLVGNGLVDMYAKCGLIEASKK 181
QPN MTYASVLSACANIYD QWGKHLHARIVR EPFLDVLVGNGLVDMYAKCGLIEASK+
Sbjct: 175 QPNSMTYASVLSACANIYDFQWGKHLHARIVRIEPFLDVLVGNGLVDMYAKCGLIEASKR 234
Query: 182 VFNLLTKRNVVTWTSLISGIVQFGSREEVYDIFYRMREDCVAMDDFILATILGVCEGEEN 241
VFN LT+RNVVTWTSLISGI QFGS+EEVYDIFYRMREDCV MDDFILATILGVCEGEEN
Sbjct: 235 VFNSLTERNVVTWTSLISGIAQFGSQEEVYDIFYRMREDCVIMDDFILATILGVCEGEEN 294
Query: 242 ISIGEQLHAFTVKAGMNSSVPVGNATVSMYAKCGEIGKASLAFESMAARDVISWTTMITA 301
ISIGEQLH F VK GM+SS+PVGNAT++MYAKCG++ KASLAFE+MAARDVISWTTMIT+
Sbjct: 295 ISIGEQLHGFAVKTGMDSSLPVGNATLTMYAKCGDVEKASLAFETMAARDVISWTTMITS 354
Query: 302 FTHNGDVQKAQDYFDRMPARNVISWNSMLGAYFQNGFWEEGLKLYILMLRQEVRPDWITF 361
FT NG+V++AQDYFDRMP RNV+SWNSML AYFQNGFWEEGLKLYI MLRQEVRPDW+TF
Sbjct: 355 FTRNGNVERAQDYFDRMPERNVVSWNSMLSAYFQNGFWEEGLKLYICMLRQEVRPDWVTF 414
Query: 362 VTTIRACSELAIAKLGTQIVSQVVKAGLGSDVSVANSAITLYSRCGNIEEAQTIFDSIQE 421
VTTI +CSELAI+KLGTQI+SQ V+ GLGSDVSVANSAITLYSRCG IE+A +FDSI+E
Sbjct: 415 VTTISSCSELAISKLGTQIISQAVRVGLGSDVSVANSAITLYSRCGKIEDAHKVFDSIRE 474
Query: 422 KNLISWNSIMGGYAQNGLGREVIEVFQNMLMVGCKPDHITFVAVLSGCSHSGLVEEAKHY 481
KNLISWNSIMGGYAQNG GR+VIE+FQNMLMVGCKPDHITFVA+LSGCSHSGLV+EAKHY
Sbjct: 475 KNLISWNSIMGGYAQNGQGRKVIELFQNMLMVGCKPDHITFVAILSGCSHSGLVKEAKHY 534
Query: 482 FNSMTRDFSISATPEHFACMVDLFGRAGLLKQAMDVIDQMPFTPNVAIWGALLSASRIHH 541
FNSMT+DF ISATPEHFACMVDLFGRAGLLK AMD+IDQMPF PNV IWG LLSA RIHH
Sbjct: 535 FNSMTKDFGISATPEHFACMVDLFGRAGLLKSAMDLIDQMPFKPNVTIWGTLLSACRIHH 594
Query: 542 DTEMAELAVKNLLALNTENSESYILLANVYSSTGRLECVSDVRQVMREKGVQKDPGCSWI 601
DTEMAE+A+KNLL LN E+SESYILLANVYSS+G+LECVSDVRQ+MREKGVQKDPGCSWI
Sbjct: 595 DTEMAEVAMKNLLELNAEHSESYILLANVYSSSGKLECVSDVRQLMREKGVQKDPGCSWI 654
Query: 602 EVCNRVHVFTVNDTDHPLIKDIYKALEDIVKKIKDDHGYVDASSSIGYHSEKLAIAFGLI 661
EV NRVHVFTVNDT+HP IKDIYKALEDIVKKIKDD+GYVDAS SIGYHSEKLAIAFGLI
Sbjct: 655 EVSNRVHVFTVNDTNHPQIKDIYKALEDIVKKIKDDYGYVDASGSIGYHSEKLAIAFGLI 714
Query: 662 SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHLKDGICSCGDYW 719
SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHL++G CSCGDYW
Sbjct: 715 SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHLENGSCSCGDYW 771
BLAST of Sed0008978 vs. ExPASy Swiss-Prot
Match:
Q9SHZ8 (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H41 PE=3 SV=1)
HSP 1 Score: 516.5 bits (1329), Expect = 4.7e-145
Identity = 285/763 (37.35%), Postives = 437/763 (57.27%), Query Frame = 0
Query: 5 NLGYARIALQL-HGLIEKYGIGNNEAVQNSVIDMYVKCGSVYAAEEVFLRIEKPSLFSWN 64
N R QL H + K G+ + + N+++++Y K G A ++F + + FSWN
Sbjct: 25 NKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWN 84
Query: 65 SMIYGYSKLQKVGKALDTFIQMPERDSVSWNTIISAFSQHGLHTQSLSMFVEMWIQDCQP 124
+++ YSK + + F Q+P+RDSVSW T+I + G + +++ + +M + +P
Sbjct: 85 TVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEP 144
Query: 125 NPMTYASVLSACANIYDLQWGKHLHARIVRFEPFLDVLVGNGLVDMYAKCGLIEASKKVF 184
T +VL++ A ++ GK +H+ IV+ +V V N L++MYAKCG +K VF
Sbjct: 145 TQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVF 204
Query: 185 N-------------------------------LLTKRNVVTWTSLISGIVQFGSREEVYD 244
+ + +R++VTW S+ISG Q G D
Sbjct: 205 DRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALD 264
Query: 245 IFYRM-REDCVAMDDFILATILGVCEGEENISIGEQLHAFTVKAGMNSSVPVGNATVSMY 304
IF +M R+ ++ D F LA++L C E + IG+Q+H+ V G + S V NA +SMY
Sbjct: 265 IFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMY 324
Query: 305 AKCGEIGKASLAFESMAARD--VISWTTMITAFTHNGDVQKAQDYFDRMPARNVISWNSM 364
++CG + A E +D + +T ++ + GD+ +A++ F + R+V++W +M
Sbjct: 325 SRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAM 384
Query: 365 LGAYFQNGFWEEGLKLYILMLRQEVRPDWITFVTTIRACSELAIAKLGTQIVSQVVKAGL 424
+ Y Q+G + E + L+ M+ RP+ T + S LA G QI VK+G
Sbjct: 385 IVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGE 444
Query: 425 GSDVSVANSAITLYSRCGNIEEAQTIFDSIQ-EKNLISWNSIMGGYAQNGLGREVIEVFQ 484
VSV+N+ IT+Y++ GNI A FD I+ E++ +SW S++ AQ+G E +E+F+
Sbjct: 445 IYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFE 504
Query: 485 NMLMVGCKPDHITFVAVLSGCSHSGLVEEAKHYFNSMTRDFSISATPEHFACMVDLFGRA 544
MLM G +PDHIT+V V S C+H+GLV + + YF+ M I T H+ACMVDLFGRA
Sbjct: 505 TMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRA 564
Query: 545 GLLKQAMDVIDQMPFTPNVAIWGALLSASRIHHDTEMAELAVKNLLALNTENSESYILLA 604
GLL++A + I++MP P+V WG+LLSA R+H + ++ ++A + LL L ENS +Y LA
Sbjct: 565 GLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALA 624
Query: 605 NVYSSTGRLECVSDVRQVMREKGVQKDPGCSWIEVCNRVHVFTVNDTDHPLIKDIYKALE 664
N+YS+ G+ E + +R+ M++ V+K+ G SWIEV ++VHVF V D HP +IY ++
Sbjct: 625 NLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMK 684
Query: 665 DIVKKIKDDHGYVDASSSI-------------GYHSEKLAIAFGLISLPDWMPIHVMKNL 719
I +IK GYV ++S+ +HSEKLAIAFGLIS PD + +MKNL
Sbjct: 685 KIWDEIK-KMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNL 744
BLAST of Sed0008978 vs. ExPASy Swiss-Prot
Match:
Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)
HSP 1 Score: 511.1 bits (1315), Expect = 2.0e-143
Identity = 251/639 (39.28%), Postives = 393/639 (61.50%), Query Frame = 0
Query: 15 LHGLIEKYGIGNNEAVQNSVIDMYVKCGSVYAAEEVFLRIEKPSLFSWNSMIYGYSKLQK 74
+H + K G N +QN +ID Y KCGS+ +VF ++ + ++++WNS++ G +KL
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 75 VGKALDTFIQMPERDSVSWNTIISAFSQHGLHTQSLSMFVEMWIQDCQPNPMTYASVLSA 134
+ +A F MPERD +WN+++S F+QH ++L F M + N ++ASVLSA
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 135 CANIYDLQWGKHLHARIVRFEPFL-DVLVGNGLVDMYAKCGLIEASKKVFNLLTKRNVVT 194
C+ + D+ G +H+ I + PFL DV +G+ LVDMY+KCG + +++VF+ + RNVV+
Sbjct: 162 CSGLNDMNKGVQVHSLIAK-SPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVS 221
Query: 195 WTSLISGIVQFGSREEVYDIFYRMREDCVAMDDFILATILGVCEGEENISIGEQLHAFTV 254
W SLI+ Q G E D+F M E V D+ LA+++ C I +G+++H V
Sbjct: 222 WNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVV 281
Query: 255 KAG-MNSSVPVGNATVSMYAKCGEIGKASLAFESMAARDVISWTTMITAFTHNGDVQKAQ 314
K + + + + NA V MYAKC I +A F+SM R+VI+ T+MI+ + + A+
Sbjct: 282 KNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAAR 341
Query: 315 DYFDRMPARNVISWNSMLGAYFQNGFWEEGLKLYILMLRQEVRPDWITFVTTIRACSELA 374
F +M RNV+SWN+++ Y QNG EE L L+ L+ R+ V P +F ++AC++LA
Sbjct: 342 LMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLA 401
Query: 375 IAKLGTQIVSQVVK------AGLGSDVSVANSAITLYSRCGNIEEAQTIFDSIQEKNLIS 434
LG Q V+K +G D+ V NS I +Y +CG +EE +F + E++ +S
Sbjct: 402 ELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVS 461
Query: 435 WNSIMGGYAQNGLGREVIEVFQNMLMVGCKPDHITFVAVLSGCSHSGLVEEAKHYFNSMT 494
WN+++ G+AQNG G E +E+F+ ML G KPDHIT + VLS C H+G VEE +HYF+SMT
Sbjct: 462 WNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMT 521
Query: 495 RDFSISATPEHFACMVDLFGRAGLLKQAMDVIDQMPFTPNVAIWGALLSASRIHHDTEMA 554
RDF ++ +H+ CMVDL GRAG L++A +I++MP P+ IWG+LL+A ++H + +
Sbjct: 522 RDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLG 581
Query: 555 ELAVKNLLALNTENSESYILLANVYSSTGRLECVSDVRQVMREKGVQKDPGCSWIEVCNR 614
+ + LL + NS Y+LL+N+Y+ G+ E V +VR+ MR++GV K PGCSWI++
Sbjct: 582 KYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGH 641
Query: 615 VHVFTVNDTDHPLIKDIYKALEDIVKKIKDDHGYVDASS 646
HVF V D HP K I+ L+ ++ +++ + + + S
Sbjct: 642 DHVFMVKDKSHPRKKQIHSLLDILIAEMRPEQDHTEIGS 679
BLAST of Sed0008978 vs. ExPASy Swiss-Prot
Match:
Q9SVP7 (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H42 PE=2 SV=2)
HSP 1 Score: 491.9 bits (1265), Expect = 1.2e-137
Identity = 253/731 (34.61%), Postives = 405/731 (55.40%), Query Frame = 0
Query: 1 MACSNLGYARIALQLHGLIEKYGIGNNEAVQNSVIDMYVKCGSVYAAEEVFLRIEKPSLF 60
+ACS G QLH K G +N ++ +++++Y KC + A + FL E ++
Sbjct: 397 VACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVV 456
Query: 61 SWNSMIYGYSKLQKVGKALDTFIQMPERDSVSWNTIISAFSQHGLHTQSLSMFVEMWIQD 120
WN M+ Y L + S +F +M I++
Sbjct: 457 LWNVMLVAYGLLDDL-------------------------------RNSFRIFRQMQIEE 516
Query: 121 CQPNPMTYASVLSACANIYDLQWGKHLHARIVRFEPFLDVLVGNGLVDMYAKCGLIEASK 180
PN TY S+L C + DL+ G+ +H++I++ L+ V + L+DMYAK G ++ +
Sbjct: 517 IVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAW 576
Query: 181 KVFNLLTKRNVVTWTSLISGIVQFGSREEVYDIFYRMREDCVAMDDFILATILGVCEGEE 240
+ ++VV+WT++I+G Q+ ++ F +M + + D+ L + C G +
Sbjct: 577 DILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQ 636
Query: 241 NISIGEQLHAFTVKAGMNSSVPVGNATVSMYAKCGEIGKASLAFESMAARDVISWTTMIT 300
+ G+Q+HA +G +S +P NA V++Y++CG+I ++ LAFE A D I+W +++
Sbjct: 637 ALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVS 696
Query: 301 AFTHNGDVQKAQDYFDRMPARNVISWNSMLGAYFQNGFWEEGLKLYILMLRQEVRPDWIT 360
F Q+G EE L++++ M R+ + + T
Sbjct: 697 GFQ-------------------------------QSGNNEEALRVFVRMNREGIDNNNFT 756
Query: 361 FVTTIRACSELAIAKLGTQIVSQVVKAGLGSDVSVANSAITLYSRCGNIEEAQTIFDSIQ 420
F + ++A SE A K G Q+ + + K G S+ V N+ I++Y++CG+I +A+ F +
Sbjct: 757 FGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVS 816
Query: 421 EKNLISWNSIMGGYAQNGLGREVIEVFQNMLMVGCKPDHITFVAVLSGCSHSGLVEEAKH 480
KN +SWN+I+ Y+++G G E ++ F M+ +P+H+T V VLS CSH GLV++
Sbjct: 817 TKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIA 876
Query: 481 YFNSMTRDFSISATPEHFACMVDLFGRAGLLKQAMDVIDQMPFTPNVAIWGALLSASRIH 540
YF SM ++ +S PEH+ C+VD+ RAGLL +A + I +MP P+ +W LLSA +H
Sbjct: 877 YFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVH 936
Query: 541 HDTEMAELAVKNLLALNTENSESYILLANVYSSTGRLECVSDVRQVMREKGVQKDPGCSW 600
+ E+ E A +LL L E+S +Y+LL+N+Y+ + + + RQ M+EKGV+K+PG SW
Sbjct: 937 KNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSW 996
Query: 601 IEVCNRVHVFTVNDTDHPLIKDIYKALEDIVKKIKDDHGYVDASSS-------------I 660
IEV N +H F V D +HPL +I++ +D+ K+ + GYV S I
Sbjct: 997 IEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKR-ASEIGYVQDCFSLLNELQHEQKDPII 1056
Query: 661 GYHSEKLAIAFGLISLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHL 719
HSEKLAI+FGL+SLP +PI+VMKNLRVCNDCH +K +S VS R+++VRD +RFHH
Sbjct: 1057 FIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHF 1064
BLAST of Sed0008978 vs. ExPASy Swiss-Prot
Match:
O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)
HSP 1 Score: 483.4 bits (1243), Expect = 4.4e-135
Identity = 232/657 (35.31%), Postives = 400/657 (60.88%), Query Frame = 0
Query: 78 ALDTFIQMPERDSVSWNTIISAFSQHGLHTQSLSMFVEMWIQ-DCQPNPMTYASVLSACA 137
A F ++P+ +S +WNT+I A++ S+ F++M + C PN T+ ++ A A
Sbjct: 83 ARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAA 142
Query: 138 NIYDLQWGKHLHARIVRFEPFLDVLVGNGLVDMYAKCGLIEASKKVFNLLTKRNVVTWTS 197
+ L G+ LH V+ DV V N L+ Y CG ++++ KVF + +++VV+W S
Sbjct: 143 EVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNS 202
Query: 198 LISGIVQFGSREEVYDIFYRMREDCVAMDDFILATILGVCEGEENISIGEQLHAFTVKAG 257
+I+G VQ GS ++ ++F +M + V + +L C N+ G Q+ ++ +
Sbjct: 203 MINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENR 262
Query: 258 MNSSVPVGNATVSMYAKCGEIGKASLAFESMAARDVISWTTMITAFTHNGDVQKAQDYFD 317
+N ++ + NA + MY KCG I A F++M +D ++WTTM+ + + D + A++ +
Sbjct: 263 VNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLN 322
Query: 318 RMPARNVISWNSMLGAYFQNGFWEEGLKLY-ILMLRQEVRPDWITFVTTIRACSELAIAK 377
MP +++++WN+++ AY QNG E L ++ L L++ ++ + IT V+T+ AC+++ +
Sbjct: 323 SMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALE 382
Query: 378 LGTQIVSQVVKAGLGSDVSVANSAITLYSRCGNIEEAQTIFDSIQEKNLISWNSIMGGYA 437
LG I S + K G+ + V ++ I +YS+CG++E+++ +F+S++++++ W++++GG A
Sbjct: 383 LGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLA 442
Query: 438 QNGLGREVIEVFQNMLMVGCKPDHITFVAVLSGCSHSGLVEEAKHYFNSMTRDFSISATP 497
+G G E +++F M KP+ +TF V CSH+GLV+EA+ F+ M ++ I
Sbjct: 443 MHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEE 502
Query: 498 EHFACMVDLFGRAGLLKQAMDVIDQMPFTPNVAIWGALLSASRIHHDTEMAELAVKNLLA 557
+H+AC+VD+ GR+G L++A+ I+ MP P+ ++WGALL A +IH + +AE+A LL
Sbjct: 503 KHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLE 562
Query: 558 LNTENSESYILLANVYSSTGRLECVSDVRQVMREKGVQKDPGCSWIEVCNRVHVFTVNDT 617
L N +++LL+N+Y+ G+ E VS++R+ MR G++K+PGCS IE+ +H F D
Sbjct: 563 LEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDN 622
Query: 618 DHPLIKDIYKALEDIVKKIKDDHGYVDASS--------------SIGYHSEKLAIAFGLI 677
HP+ + +Y L ++++K+K +GY S S+ HSEKLAI +GLI
Sbjct: 623 AHPMSEKVYGKLHEVMEKLK-SNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLI 682
Query: 678 SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHLKDGICSCGDYW 719
S I V+KNLRVC DCH V KLIS + R+++VRD +RFHH ++G CSC D+W
Sbjct: 683 STEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
BLAST of Sed0008978 vs. ExPASy Swiss-Prot
Match:
Q9SY02 (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1)
HSP 1 Score: 481.5 bits (1238), Expect = 1.7e-134
Identity = 252/700 (36.00%), Postives = 410/700 (58.57%), Query Frame = 0
Query: 32 NSVIDMYVKCGSVYAAEEVFLRIEKPSLFSWNSMIYGYSKLQKVGKALDTFIQMPERDSV 91
N +I Y++ G A ++F + + L SWN MI GY + + +GKA + F MPERD
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVC 158
Query: 92 SWNTIISAFSQHGLHTQSLSMFVEMWIQDCQPNPMTYASVLSACANIYDLQWGKHLHARI 151
SWNT++S ++Q+G + S+F M + N +++ ++LSA ++ +
Sbjct: 159 SWNTMLSGYAQNGCVDDARSVFDRM----PEKNDVSWNALLSAYVQNSKMEEA----CML 218
Query: 152 VRFEPFLDVLVGNGLVDMYAKCGLIEASKKVFNLLTKRNVVTWTSLISGIVQFGSREEVY 211
+ ++ N L+ + K I +++ F+ + R+VV+W ++I+G Q G +E
Sbjct: 219 FKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEAR 278
Query: 212 DIFYRMREDCVAMDDFILATILGVCEGEENISIGEQLHAFTVKAGMNSSVPVGNATVSMY 271
+F ++ D F T + G + E+ K + V NA ++ Y
Sbjct: 279 QLF----DESPVQDVF---TWTAMVSGYIQNRMVEEARELFDKMPERNEVS-WNAMLAGY 338
Query: 272 AKCGEIGKASLAFESMAARDVISWTTMITAFTHNGDVQKAQDYFDRMPARNVISWNSMLG 331
+ + A F+ M R+V +W TMIT + G + +A++ FD+MP R+ +SW +M+
Sbjct: 339 VQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIA 398
Query: 332 AYFQNGFWEEGLKLYILMLRQEVRPDWITFVTTIRACSELAIAKLGTQIVSQVVKAGLGS 391
Y Q+G E L+L++ M R+ R + +F + + C+++ +LG Q+ ++VK G +
Sbjct: 399 GYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYET 458
Query: 392 DVSVANSAITLYSRCGNIEEAQTIFDSIQEKNLISWNSIMGGYAQNGLGREVIEVFQNML 451
V N+ + +Y +CG+IEEA +F + K+++SWN+++ GY+++G G + F++M
Sbjct: 459 GCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMK 518
Query: 452 MVGCKPDHITFVAVLSGCSHSGLVEEAKHYFNSMTRDFSISATPEHFACMVDLFGRAGLL 511
G KPD T VAVLS CSH+GLV++ + YF +MT+D+ + +H+ACMVDL GRAGLL
Sbjct: 519 REGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLL 578
Query: 512 KQAMDVIDQMPFTPNVAIWGALLSASRIHHDTEMAELAVKNLLALNTENSESYILLANVY 571
+ A +++ MPF P+ AIWG LL ASR+H +TE+AE A + A+ ENS Y+LL+N+Y
Sbjct: 579 EDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLY 638
Query: 572 SSTGRLECVSDVRQVMREKGVQKDPGCSWIEVCNRVHVFTVNDTDHPLIKDIYKALEDIV 631
+S+GR V +R MR+KGV+K PG SWIE+ N+ H F+V D HP +I+ LE++
Sbjct: 639 ASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELD 698
Query: 632 KKIKDDHGYVDASS-------------SIGYHSEKLAIAFGLISLPDWMPIHVMKNLRVC 691
++K GYV +S + YHSE+LA+A+G++ + PI V+KNLRVC
Sbjct: 699 LRMK-KAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVC 758
Query: 692 NDCHQVMKLISLVSMRKLVVRDGHRFHHLKDGICSCGDYW 719
DCH +K ++ ++ R +++RD +RFHH KDG CSCGDYW
Sbjct: 759 EDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
BLAST of Sed0008978 vs. ExPASy TrEMBL
Match:
A0A6J1EIC0 (pentatricopeptide repeat-containing protein At2g13600-like OS=Cucurbita moschata OX=3662 GN=LOC111434352 PE=3 SV=1)
HSP 1 Score: 1305.0 bits (3376), Expect = 0.0e+00
Identity = 624/717 (87.03%), Postives = 675/717 (94.14%), Query Frame = 0
Query: 2 ACSNLGYARIALQLHGLIEKYGIGNNEAVQNSVIDMYVKCGSVYAAEEVFLRIEKPSLFS 61
ACS++GY RIALQLHGL KYGIGNNEA+QNSVIDMYVKCG++YAAE+VFLRIEKPSLFS
Sbjct: 202 ACSSVGYLRIALQLHGLSVKYGIGNNEAIQNSVIDMYVKCGAIYAAEQVFLRIEKPSLFS 261
Query: 62 WNSMIYGYSKLQKVGKALDTFIQMPERDSVSWNTIISAFSQHGLHTQSLSMFVEMWIQDC 121
WNSMIYGYSKL ++G+ALDTF++MPE DSVSWNTIISAFSQHGLHT+SLS FVEMWI DC
Sbjct: 262 WNSMIYGYSKLHEMGRALDTFMKMPEHDSVSWNTIISAFSQHGLHTRSLSTFVEMWIHDC 321
Query: 122 QPNPMTYASVLSACANIYDLQWGKHLHARIVRFEPFLDVLVGNGLVDMYAKCGLIEASKK 181
QPN MTYASVLSACANIYD QWGKHLHARIVR EPFLDVLVGNGLVDMYAKCGLIEASK+
Sbjct: 322 QPNSMTYASVLSACANIYDFQWGKHLHARIVRIEPFLDVLVGNGLVDMYAKCGLIEASKR 381
Query: 182 VFNLLTKRNVVTWTSLISGIVQFGSREEVYDIFYRMREDCVAMDDFILATILGVCEGEEN 241
VFN LT+RNVVTWTSLISGI QFGS+EEVYDIF RMRED V MD FILATILGVCEGEEN
Sbjct: 382 VFNSLTERNVVTWTSLISGIAQFGSQEEVYDIFCRMREDRVIMDGFILATILGVCEGEEN 441
Query: 242 ISIGEQLHAFTVKAGMNSSVPVGNATVSMYAKCGEIGKASLAFESMAARDVISWTTMITA 301
ISIGEQLH F VK GM+SS+PVGNAT++MYAKCG++ KA+LAFE+MAARDVISWTTMIT+
Sbjct: 442 ISIGEQLHGFAVKTGMDSSLPVGNATLTMYAKCGDVEKANLAFETMAARDVISWTTMITS 501
Query: 302 FTHNGDVQKAQDYFDRMPARNVISWNSMLGAYFQNGFWEEGLKLYILMLRQEVRPDWITF 361
FT NG+V++AQDYFDRMP RNVISWNSML AYFQNG+WEEGLKLYI MLRQEVRPDW+TF
Sbjct: 502 FTRNGNVERAQDYFDRMPERNVISWNSMLSAYFQNGYWEEGLKLYICMLRQEVRPDWVTF 561
Query: 362 VTTIRACSELAIAKLGTQIVSQVVKAGLGSDVSVANSAITLYSRCGNIEEAQTIFDSIQE 421
VTTI +CSELAI+KLGTQIVSQ V+ GLGSDVSVANSAITLYSRCG IE+A +FDSIQE
Sbjct: 562 VTTISSCSELAISKLGTQIVSQAVRVGLGSDVSVANSAITLYSRCGKIEDAHKVFDSIQE 621
Query: 422 KNLISWNSIMGGYAQNGLGREVIEVFQNMLMVGCKPDHITFVAVLSGCSHSGLVEEAKHY 481
KNLISWNSIMGGYAQNG GR+VIE+FQNMLMVGCKPDHIT+VA+LSGCSHSGLV+EAKHY
Sbjct: 622 KNLISWNSIMGGYAQNGQGRKVIELFQNMLMVGCKPDHITYVAILSGCSHSGLVKEAKHY 681
Query: 482 FNSMTRDFSISATPEHFACMVDLFGRAGLLKQAMDVIDQMPFTPNVAIWGALLSASRIHH 541
FNSMT+DF ISATPEHFACMVDLFGRAGLLK AMD+IDQMPF PNV IWG LLSA RIHH
Sbjct: 682 FNSMTKDFGISATPEHFACMVDLFGRAGLLKSAMDLIDQMPFKPNVTIWGTLLSACRIHH 741
Query: 542 DTEMAELAVKNLLALNTENSESYILLANVYSSTGRLECVSDVRQVMREKGVQKDPGCSWI 601
DTEMAE+A+KNLL LN E+SESYILLANVYSS+G+LECVSDVRQ+MREKGVQKDPGCSWI
Sbjct: 742 DTEMAEVAMKNLLELNAEHSESYILLANVYSSSGKLECVSDVRQLMREKGVQKDPGCSWI 801
Query: 602 EVCNRVHVFTVNDTDHPLIKDIYKALEDIVKKIKDDHGYVDASSSIGYHSEKLAIAFGLI 661
EV NRVHVFTVNDT+HP IKDIYKALEDIVKKIKDD+GYVDASSSIGYHSEKLAIAFGLI
Sbjct: 802 EVSNRVHVFTVNDTNHPQIKDIYKALEDIVKKIKDDYGYVDASSSIGYHSEKLAIAFGLI 861
Query: 662 SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHLKDGICSCGDYW 719
SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHL++G CSCGDYW
Sbjct: 862 SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHLENGSCSCGDYW 918
BLAST of Sed0008978 vs. ExPASy TrEMBL
Match:
A0A6J1I7S2 (pentatricopeptide repeat-containing protein At2g13600-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471635 PE=3 SV=1)
HSP 1 Score: 1297.0 bits (3355), Expect = 0.0e+00
Identity = 618/717 (86.19%), Postives = 672/717 (93.72%), Query Frame = 0
Query: 2 ACSNLGYARIALQLHGLIEKYGIGNNEAVQNSVIDMYVKCGSVYAAEEVFLRIEKPSLFS 61
ACS++GY RIALQLHGL KYGIGNNEA+QNSVIDMYVKCG++YAAE+VFLRIEKPSLFS
Sbjct: 202 ACSSVGYLRIALQLHGLSVKYGIGNNEAIQNSVIDMYVKCGAIYAAEQVFLRIEKPSLFS 261
Query: 62 WNSMIYGYSKLQKVGKALDTFIQMPERDSVSWNTIISAFSQHGLHTQSLSMFVEMWIQDC 121
WNSMIYGYSKL ++G+ALDTF++MPE DSVSWNTIISAFSQHGLHT+SLS FVEMWI DC
Sbjct: 262 WNSMIYGYSKLHEMGQALDTFMKMPEHDSVSWNTIISAFSQHGLHTRSLSTFVEMWIHDC 321
Query: 122 QPNPMTYASVLSACANIYDLQWGKHLHARIVRFEPFLDVLVGNGLVDMYAKCGLIEASKK 181
QPN MTYASVLSACANIYD QWGKHLHARI+R EP LDVLVGNGLVDMYAKCGLIEASK+
Sbjct: 322 QPNSMTYASVLSACANIYDFQWGKHLHARIMRIEPILDVLVGNGLVDMYAKCGLIEASKR 381
Query: 182 VFNLLTKRNVVTWTSLISGIVQFGSREEVYDIFYRMREDCVAMDDFILATILGVCEGEEN 241
VFN LT+RNVVTWTSLISGI QFGS+EEVYDIFYRMREDCV MDDFILATILGVCEGEEN
Sbjct: 382 VFNSLTERNVVTWTSLISGIAQFGSQEEVYDIFYRMREDCVIMDDFILATILGVCEGEEN 441
Query: 242 ISIGEQLHAFTVKAGMNSSVPVGNATVSMYAKCGEIGKASLAFESMAARDVISWTTMITA 301
ISIGEQLH F VK GM+SS+PVGNAT++MYAKCG++ KA+LAFE+MAARDVISWT MIT+
Sbjct: 442 ISIGEQLHGFAVKTGMDSSLPVGNATLTMYAKCGDVEKANLAFETMAARDVISWTAMITS 501
Query: 302 FTHNGDVQKAQDYFDRMPARNVISWNSMLGAYFQNGFWEEGLKLYILMLRQEVRPDWITF 361
FT NG+V++AQ YFDRMP RNV+SWNSML AYFQNGFWEEGLKLYI MLRQEVRPDW+TF
Sbjct: 502 FTRNGNVERAQYYFDRMPERNVVSWNSMLSAYFQNGFWEEGLKLYICMLRQEVRPDWVTF 561
Query: 362 VTTIRACSELAIAKLGTQIVSQVVKAGLGSDVSVANSAITLYSRCGNIEEAQTIFDSIQE 421
VTTI +CSELAI+KLGTQIVSQ V+ GLGSDVSVANSAITLYSRCG IE+A +FDSIQE
Sbjct: 562 VTTISSCSELAISKLGTQIVSQAVRVGLGSDVSVANSAITLYSRCGKIEDAHKVFDSIQE 621
Query: 422 KNLISWNSIMGGYAQNGLGREVIEVFQNMLMVGCKPDHITFVAVLSGCSHSGLVEEAKHY 481
KNLISWNSIMGGYAQNG GR+VIE+FQNMLMVGCKPDHIT+VA+LSGCSHSGLV+EAKHY
Sbjct: 622 KNLISWNSIMGGYAQNGQGRKVIELFQNMLMVGCKPDHITYVAILSGCSHSGLVKEAKHY 681
Query: 482 FNSMTRDFSISATPEHFACMVDLFGRAGLLKQAMDVIDQMPFTPNVAIWGALLSASRIHH 541
FNSM++DF I ATPEHFACMVDLFGRAGLLK AMD+I QMPF PNV IWG LLSA RIHH
Sbjct: 682 FNSMSKDFGICATPEHFACMVDLFGRAGLLKSAMDLIGQMPFKPNVTIWGTLLSACRIHH 741
Query: 542 DTEMAELAVKNLLALNTENSESYILLANVYSSTGRLECVSDVRQVMREKGVQKDPGCSWI 601
DTEMAE+A+KNLL LN E+SESYILLANVYSS+G+LECVSDVRQ+MR+KGVQKDPGCSWI
Sbjct: 742 DTEMAEMAMKNLLELNAEHSESYILLANVYSSSGKLECVSDVRQLMRQKGVQKDPGCSWI 801
Query: 602 EVCNRVHVFTVNDTDHPLIKDIYKALEDIVKKIKDDHGYVDASSSIGYHSEKLAIAFGLI 661
EV NRVHVFTVNDT+HP IKDI KALEDIVKKIKDD+GYVDASSSIGYHSEKLAIAFGLI
Sbjct: 802 EVSNRVHVFTVNDTNHPQIKDICKALEDIVKKIKDDYGYVDASSSIGYHSEKLAIAFGLI 861
Query: 662 SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHLKDGICSCGDYW 719
SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHL++G CSCGDYW
Sbjct: 862 SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHLENGSCSCGDYW 918
BLAST of Sed0008978 vs. ExPASy TrEMBL
Match:
A0A6J1IDK4 (pentatricopeptide repeat-containing protein At2g13600-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111471635 PE=3 SV=1)
HSP 1 Score: 1297.0 bits (3355), Expect = 0.0e+00
Identity = 618/717 (86.19%), Postives = 672/717 (93.72%), Query Frame = 0
Query: 2 ACSNLGYARIALQLHGLIEKYGIGNNEAVQNSVIDMYVKCGSVYAAEEVFLRIEKPSLFS 61
ACS++GY RIALQLHGL KYGIGNNEA+QNSVIDMYVKCG++YAAE+VFLRIEKPSLFS
Sbjct: 55 ACSSVGYLRIALQLHGLSVKYGIGNNEAIQNSVIDMYVKCGAIYAAEQVFLRIEKPSLFS 114
Query: 62 WNSMIYGYSKLQKVGKALDTFIQMPERDSVSWNTIISAFSQHGLHTQSLSMFVEMWIQDC 121
WNSMIYGYSKL ++G+ALDTF++MPE DSVSWNTIISAFSQHGLHT+SLS FVEMWI DC
Sbjct: 115 WNSMIYGYSKLHEMGQALDTFMKMPEHDSVSWNTIISAFSQHGLHTRSLSTFVEMWIHDC 174
Query: 122 QPNPMTYASVLSACANIYDLQWGKHLHARIVRFEPFLDVLVGNGLVDMYAKCGLIEASKK 181
QPN MTYASVLSACANIYD QWGKHLHARI+R EP LDVLVGNGLVDMYAKCGLIEASK+
Sbjct: 175 QPNSMTYASVLSACANIYDFQWGKHLHARIMRIEPILDVLVGNGLVDMYAKCGLIEASKR 234
Query: 182 VFNLLTKRNVVTWTSLISGIVQFGSREEVYDIFYRMREDCVAMDDFILATILGVCEGEEN 241
VFN LT+RNVVTWTSLISGI QFGS+EEVYDIFYRMREDCV MDDFILATILGVCEGEEN
Sbjct: 235 VFNSLTERNVVTWTSLISGIAQFGSQEEVYDIFYRMREDCVIMDDFILATILGVCEGEEN 294
Query: 242 ISIGEQLHAFTVKAGMNSSVPVGNATVSMYAKCGEIGKASLAFESMAARDVISWTTMITA 301
ISIGEQLH F VK GM+SS+PVGNAT++MYAKCG++ KA+LAFE+MAARDVISWT MIT+
Sbjct: 295 ISIGEQLHGFAVKTGMDSSLPVGNATLTMYAKCGDVEKANLAFETMAARDVISWTAMITS 354
Query: 302 FTHNGDVQKAQDYFDRMPARNVISWNSMLGAYFQNGFWEEGLKLYILMLRQEVRPDWITF 361
FT NG+V++AQ YFDRMP RNV+SWNSML AYFQNGFWEEGLKLYI MLRQEVRPDW+TF
Sbjct: 355 FTRNGNVERAQYYFDRMPERNVVSWNSMLSAYFQNGFWEEGLKLYICMLRQEVRPDWVTF 414
Query: 362 VTTIRACSELAIAKLGTQIVSQVVKAGLGSDVSVANSAITLYSRCGNIEEAQTIFDSIQE 421
VTTI +CSELAI+KLGTQIVSQ V+ GLGSDVSVANSAITLYSRCG IE+A +FDSIQE
Sbjct: 415 VTTISSCSELAISKLGTQIVSQAVRVGLGSDVSVANSAITLYSRCGKIEDAHKVFDSIQE 474
Query: 422 KNLISWNSIMGGYAQNGLGREVIEVFQNMLMVGCKPDHITFVAVLSGCSHSGLVEEAKHY 481
KNLISWNSIMGGYAQNG GR+VIE+FQNMLMVGCKPDHIT+VA+LSGCSHSGLV+EAKHY
Sbjct: 475 KNLISWNSIMGGYAQNGQGRKVIELFQNMLMVGCKPDHITYVAILSGCSHSGLVKEAKHY 534
Query: 482 FNSMTRDFSISATPEHFACMVDLFGRAGLLKQAMDVIDQMPFTPNVAIWGALLSASRIHH 541
FNSM++DF I ATPEHFACMVDLFGRAGLLK AMD+I QMPF PNV IWG LLSA RIHH
Sbjct: 535 FNSMSKDFGICATPEHFACMVDLFGRAGLLKSAMDLIGQMPFKPNVTIWGTLLSACRIHH 594
Query: 542 DTEMAELAVKNLLALNTENSESYILLANVYSSTGRLECVSDVRQVMREKGVQKDPGCSWI 601
DTEMAE+A+KNLL LN E+SESYILLANVYSS+G+LECVSDVRQ+MR+KGVQKDPGCSWI
Sbjct: 595 DTEMAEMAMKNLLELNAEHSESYILLANVYSSSGKLECVSDVRQLMRQKGVQKDPGCSWI 654
Query: 602 EVCNRVHVFTVNDTDHPLIKDIYKALEDIVKKIKDDHGYVDASSSIGYHSEKLAIAFGLI 661
EV NRVHVFTVNDT+HP IKDI KALEDIVKKIKDD+GYVDASSSIGYHSEKLAIAFGLI
Sbjct: 655 EVSNRVHVFTVNDTNHPQIKDICKALEDIVKKIKDDYGYVDASSSIGYHSEKLAIAFGLI 714
Query: 662 SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHLKDGICSCGDYW 719
SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHL++G CSCGDYW
Sbjct: 715 SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHLENGSCSCGDYW 771
BLAST of Sed0008978 vs. ExPASy TrEMBL
Match:
A0A6J1IC44 (pentatricopeptide repeat-containing protein At2g13600-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111471635 PE=3 SV=1)
HSP 1 Score: 1297.0 bits (3355), Expect = 0.0e+00
Identity = 618/717 (86.19%), Postives = 672/717 (93.72%), Query Frame = 0
Query: 2 ACSNLGYARIALQLHGLIEKYGIGNNEAVQNSVIDMYVKCGSVYAAEEVFLRIEKPSLFS 61
ACS++GY RIALQLHGL KYGIGNNEA+QNSVIDMYVKCG++YAAE+VFLRIEKPSLFS
Sbjct: 174 ACSSVGYLRIALQLHGLSVKYGIGNNEAIQNSVIDMYVKCGAIYAAEQVFLRIEKPSLFS 233
Query: 62 WNSMIYGYSKLQKVGKALDTFIQMPERDSVSWNTIISAFSQHGLHTQSLSMFVEMWIQDC 121
WNSMIYGYSKL ++G+ALDTF++MPE DSVSWNTIISAFSQHGLHT+SLS FVEMWI DC
Sbjct: 234 WNSMIYGYSKLHEMGQALDTFMKMPEHDSVSWNTIISAFSQHGLHTRSLSTFVEMWIHDC 293
Query: 122 QPNPMTYASVLSACANIYDLQWGKHLHARIVRFEPFLDVLVGNGLVDMYAKCGLIEASKK 181
QPN MTYASVLSACANIYD QWGKHLHARI+R EP LDVLVGNGLVDMYAKCGLIEASK+
Sbjct: 294 QPNSMTYASVLSACANIYDFQWGKHLHARIMRIEPILDVLVGNGLVDMYAKCGLIEASKR 353
Query: 182 VFNLLTKRNVVTWTSLISGIVQFGSREEVYDIFYRMREDCVAMDDFILATILGVCEGEEN 241
VFN LT+RNVVTWTSLISGI QFGS+EEVYDIFYRMREDCV MDDFILATILGVCEGEEN
Sbjct: 354 VFNSLTERNVVTWTSLISGIAQFGSQEEVYDIFYRMREDCVIMDDFILATILGVCEGEEN 413
Query: 242 ISIGEQLHAFTVKAGMNSSVPVGNATVSMYAKCGEIGKASLAFESMAARDVISWTTMITA 301
ISIGEQLH F VK GM+SS+PVGNAT++MYAKCG++ KA+LAFE+MAARDVISWT MIT+
Sbjct: 414 ISIGEQLHGFAVKTGMDSSLPVGNATLTMYAKCGDVEKANLAFETMAARDVISWTAMITS 473
Query: 302 FTHNGDVQKAQDYFDRMPARNVISWNSMLGAYFQNGFWEEGLKLYILMLRQEVRPDWITF 361
FT NG+V++AQ YFDRMP RNV+SWNSML AYFQNGFWEEGLKLYI MLRQEVRPDW+TF
Sbjct: 474 FTRNGNVERAQYYFDRMPERNVVSWNSMLSAYFQNGFWEEGLKLYICMLRQEVRPDWVTF 533
Query: 362 VTTIRACSELAIAKLGTQIVSQVVKAGLGSDVSVANSAITLYSRCGNIEEAQTIFDSIQE 421
VTTI +CSELAI+KLGTQIVSQ V+ GLGSDVSVANSAITLYSRCG IE+A +FDSIQE
Sbjct: 534 VTTISSCSELAISKLGTQIVSQAVRVGLGSDVSVANSAITLYSRCGKIEDAHKVFDSIQE 593
Query: 422 KNLISWNSIMGGYAQNGLGREVIEVFQNMLMVGCKPDHITFVAVLSGCSHSGLVEEAKHY 481
KNLISWNSIMGGYAQNG GR+VIE+FQNMLMVGCKPDHIT+VA+LSGCSHSGLV+EAKHY
Sbjct: 594 KNLISWNSIMGGYAQNGQGRKVIELFQNMLMVGCKPDHITYVAILSGCSHSGLVKEAKHY 653
Query: 482 FNSMTRDFSISATPEHFACMVDLFGRAGLLKQAMDVIDQMPFTPNVAIWGALLSASRIHH 541
FNSM++DF I ATPEHFACMVDLFGRAGLLK AMD+I QMPF PNV IWG LLSA RIHH
Sbjct: 654 FNSMSKDFGICATPEHFACMVDLFGRAGLLKSAMDLIGQMPFKPNVTIWGTLLSACRIHH 713
Query: 542 DTEMAELAVKNLLALNTENSESYILLANVYSSTGRLECVSDVRQVMREKGVQKDPGCSWI 601
DTEMAE+A+KNLL LN E+SESYILLANVYSS+G+LECVSDVRQ+MR+KGVQKDPGCSWI
Sbjct: 714 DTEMAEMAMKNLLELNAEHSESYILLANVYSSSGKLECVSDVRQLMRQKGVQKDPGCSWI 773
Query: 602 EVCNRVHVFTVNDTDHPLIKDIYKALEDIVKKIKDDHGYVDASSSIGYHSEKLAIAFGLI 661
EV NRVHVFTVNDT+HP IKDI KALEDIVKKIKDD+GYVDASSSIGYHSEKLAIAFGLI
Sbjct: 774 EVSNRVHVFTVNDTNHPQIKDICKALEDIVKKIKDDYGYVDASSSIGYHSEKLAIAFGLI 833
Query: 662 SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHLKDGICSCGDYW 719
SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHL++G CSCGDYW
Sbjct: 834 SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHLENGSCSCGDYW 890
BLAST of Sed0008978 vs. ExPASy TrEMBL
Match:
A0A6J1CM06 (pentatricopeptide repeat-containing protein At2g13600-like OS=Momordica charantia OX=3673 GN=LOC111012528 PE=3 SV=1)
HSP 1 Score: 1281.9 bits (3316), Expect = 0.0e+00
Identity = 616/717 (85.91%), Postives = 662/717 (92.33%), Query Frame = 0
Query: 2 ACSNLGYARIALQLHGLIEKYGIGNNEAVQNSVIDMYVKCGSVYAAEEVFLRIEKPSLFS 61
ACS+LGY RIALQLHGL+EKYG N+EA++NSVIDMYVKCG+VYAAEEVF+RIEKPSLFS
Sbjct: 205 ACSSLGYVRIALQLHGLVEKYGFRNDEAIRNSVIDMYVKCGAVYAAEEVFMRIEKPSLFS 264
Query: 62 WNSMIYGYSKLQKVGKALDTFIQMPERDSVSWNTIISAFSQHGLHTQSLSMFVEMWIQDC 121
WNSMIYGYSK +G+ALDTFIQMPE DSVSW+ IISAFSQHGLHTQSL MFVEMWIQDC
Sbjct: 265 WNSMIYGYSKSYGIGQALDTFIQMPEHDSVSWSMIISAFSQHGLHTQSLGMFVEMWIQDC 324
Query: 122 QPNPMTYASVLSACANIYDLQWGKHLHARIVRFEPFLDVLVGNGLVDMYAKCGLIEASKK 181
QPN +TYASVLSACAN+YDLQWGKHLHARIVR EPFLDVLVGNGLVDMYAKCGL+EAS++
Sbjct: 325 QPNSITYASVLSACANVYDLQWGKHLHARIVRNEPFLDVLVGNGLVDMYAKCGLVEASRR 384
Query: 182 VFNLLTKRNVVTWTSLISGIVQFGSREEVYDIFYRMREDCVAMDDFILATILGVCEGEEN 241
VFN LT+RNVVTWTSLISGI QFGSREEV+D+FYRMRE CVAMD+F LATILGVCEGEEN
Sbjct: 385 VFNSLTERNVVTWTSLISGIAQFGSREEVFDLFYRMREACVAMDEFTLATILGVCEGEEN 444
Query: 242 ISIGEQLHAFTVKAGMNSSVPVGNATVSMYAKCGEIGKASLAFESMAARDVISWTTMITA 301
ISIGEQLH FTVK GM+SSVPVGNATV+MYAKCG I K SLAFE+M ARD++SWT MIT
Sbjct: 445 ISIGEQLHGFTVKTGMDSSVPVGNATVTMYAKCGNIEKGSLAFETMPARDIVSWTAMITM 504
Query: 302 FTHNGDVQKAQDYFDRMPARNVISWNSMLGAYFQNGFWEEGLKLYILMLRQEVRPDWITF 361
FTH+GDV+KA+DYFDRMP RNVISWNSMLGA FQNGFWEEGLKLYILMLRQEVRPDWITF
Sbjct: 505 FTHSGDVEKARDYFDRMPERNVISWNSMLGACFQNGFWEEGLKLYILMLRQEVRPDWITF 564
Query: 362 VTTIRACSELAIAKLGTQIVSQVVKAGLGSDVSVANSAITLYSRCGNIEEAQTIFDSIQE 421
TTI ACSELA KLGTQIVSQ KAGLGSDVSVANSAITLYSRCG IEEAQ IFDSIQE
Sbjct: 565 ATTISACSELATLKLGTQIVSQAKKAGLGSDVSVANSAITLYSRCGKIEEAQNIFDSIQE 624
Query: 422 KNLISWNSIMGGYAQNGLGREVIEVFQNMLMVGCKPDHITFVAVLSGCSHSGLVEEAKHY 481
KNLISWNSIMGGYAQNG GR+VIEVFQNML+VGCKPDHIT+VA+LSGCSHSGLV+E KHY
Sbjct: 625 KNLISWNSIMGGYAQNGQGRKVIEVFQNMLVVGCKPDHITYVAILSGCSHSGLVKEGKHY 684
Query: 482 FNSMTRDFSISATPEHFACMVDLFGRAGLLKQAMDVIDQMPFTPNVAIWGALLSASRIHH 541
FNSMT DF IS T EHFACMVDLFGRAGLLKQ+MD+IDQMPF PN AIW ALLSA RIHH
Sbjct: 685 FNSMTEDFGISPTSEHFACMVDLFGRAGLLKQSMDLIDQMPFKPNAAIWSALLSACRIHH 744
Query: 542 DTEMAELAVKNLLALNTENSESYILLANVYSSTGRLECVSDVRQVMREKGVQKDPGCSWI 601
DTEMAELA+KNLL LN E+S SYILLANVYS+ GRL+ VSDVRQ M+EKGVQKDPGCSWI
Sbjct: 745 DTEMAELAMKNLLELNVESSGSYILLANVYSNYGRLKSVSDVRQAMKEKGVQKDPGCSWI 804
Query: 602 EVCNRVHVFTVNDTDHPLIKDIYKALEDIVKKIKDDHGYVDASSSIGYHSEKLAIAFGLI 661
EV NRVHVFTVNDT+HP KDIYKALEDIVKKI+D +GYVD SSS+GYHSEKLAIAFGLI
Sbjct: 805 EVSNRVHVFTVNDTNHPQTKDIYKALEDIVKKIEDAYGYVDMSSSVGYHSEKLAIAFGLI 864
Query: 662 SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHLKDGICSCGDYW 719
SLP WMPIHVMKNLRVC+DCH+VMKLISLV+MRKLVVRDGHRFHHLKDGICSCGDYW
Sbjct: 865 SLPGWMPIHVMKNLRVCDDCHRVMKLISLVAMRKLVVRDGHRFHHLKDGICSCGDYW 921
BLAST of Sed0008978 vs. TAIR 10
Match:
AT2G22070.1 (pentatricopeptide (PPR) repeat-containing protein )
HSP 1 Score: 516.5 bits (1329), Expect = 3.3e-146
Identity = 285/763 (37.35%), Postives = 437/763 (57.27%), Query Frame = 0
Query: 5 NLGYARIALQL-HGLIEKYGIGNNEAVQNSVIDMYVKCGSVYAAEEVFLRIEKPSLFSWN 64
N R QL H + K G+ + + N+++++Y K G A ++F + + FSWN
Sbjct: 25 NKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWN 84
Query: 65 SMIYGYSKLQKVGKALDTFIQMPERDSVSWNTIISAFSQHGLHTQSLSMFVEMWIQDCQP 124
+++ YSK + + F Q+P+RDSVSW T+I + G + +++ + +M + +P
Sbjct: 85 TVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEP 144
Query: 125 NPMTYASVLSACANIYDLQWGKHLHARIVRFEPFLDVLVGNGLVDMYAKCGLIEASKKVF 184
T +VL++ A ++ GK +H+ IV+ +V V N L++MYAKCG +K VF
Sbjct: 145 TQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVF 204
Query: 185 N-------------------------------LLTKRNVVTWTSLISGIVQFGSREEVYD 244
+ + +R++VTW S+ISG Q G D
Sbjct: 205 DRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALD 264
Query: 245 IFYRM-REDCVAMDDFILATILGVCEGEENISIGEQLHAFTVKAGMNSSVPVGNATVSMY 304
IF +M R+ ++ D F LA++L C E + IG+Q+H+ V G + S V NA +SMY
Sbjct: 265 IFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMY 324
Query: 305 AKCGEIGKASLAFESMAARD--VISWTTMITAFTHNGDVQKAQDYFDRMPARNVISWNSM 364
++CG + A E +D + +T ++ + GD+ +A++ F + R+V++W +M
Sbjct: 325 SRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAM 384
Query: 365 LGAYFQNGFWEEGLKLYILMLRQEVRPDWITFVTTIRACSELAIAKLGTQIVSQVVKAGL 424
+ Y Q+G + E + L+ M+ RP+ T + S LA G QI VK+G
Sbjct: 385 IVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGE 444
Query: 425 GSDVSVANSAITLYSRCGNIEEAQTIFDSIQ-EKNLISWNSIMGGYAQNGLGREVIEVFQ 484
VSV+N+ IT+Y++ GNI A FD I+ E++ +SW S++ AQ+G E +E+F+
Sbjct: 445 IYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFE 504
Query: 485 NMLMVGCKPDHITFVAVLSGCSHSGLVEEAKHYFNSMTRDFSISATPEHFACMVDLFGRA 544
MLM G +PDHIT+V V S C+H+GLV + + YF+ M I T H+ACMVDLFGRA
Sbjct: 505 TMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRA 564
Query: 545 GLLKQAMDVIDQMPFTPNVAIWGALLSASRIHHDTEMAELAVKNLLALNTENSESYILLA 604
GLL++A + I++MP P+V WG+LLSA R+H + ++ ++A + LL L ENS +Y LA
Sbjct: 565 GLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALA 624
Query: 605 NVYSSTGRLECVSDVRQVMREKGVQKDPGCSWIEVCNRVHVFTVNDTDHPLIKDIYKALE 664
N+YS+ G+ E + +R+ M++ V+K+ G SWIEV ++VHVF V D HP +IY ++
Sbjct: 625 NLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMK 684
Query: 665 DIVKKIKDDHGYVDASSSI-------------GYHSEKLAIAFGLISLPDWMPIHVMKNL 719
I +IK GYV ++S+ +HSEKLAIAFGLIS PD + +MKNL
Sbjct: 685 KIWDEIK-KMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNL 744
BLAST of Sed0008978 vs. TAIR 10
Match:
AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 511.1 bits (1315), Expect = 1.4e-144
Identity = 251/639 (39.28%), Postives = 393/639 (61.50%), Query Frame = 0
Query: 15 LHGLIEKYGIGNNEAVQNSVIDMYVKCGSVYAAEEVFLRIEKPSLFSWNSMIYGYSKLQK 74
+H + K G N +QN +ID Y KCGS+ +VF ++ + ++++WNS++ G +KL
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 75 VGKALDTFIQMPERDSVSWNTIISAFSQHGLHTQSLSMFVEMWIQDCQPNPMTYASVLSA 134
+ +A F MPERD +WN+++S F+QH ++L F M + N ++ASVLSA
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 135 CANIYDLQWGKHLHARIVRFEPFL-DVLVGNGLVDMYAKCGLIEASKKVFNLLTKRNVVT 194
C+ + D+ G +H+ I + PFL DV +G+ LVDMY+KCG + +++VF+ + RNVV+
Sbjct: 162 CSGLNDMNKGVQVHSLIAK-SPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVS 221
Query: 195 WTSLISGIVQFGSREEVYDIFYRMREDCVAMDDFILATILGVCEGEENISIGEQLHAFTV 254
W SLI+ Q G E D+F M E V D+ LA+++ C I +G+++H V
Sbjct: 222 WNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVV 281
Query: 255 KAG-MNSSVPVGNATVSMYAKCGEIGKASLAFESMAARDVISWTTMITAFTHNGDVQKAQ 314
K + + + + NA V MYAKC I +A F+SM R+VI+ T+MI+ + + A+
Sbjct: 282 KNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAAR 341
Query: 315 DYFDRMPARNVISWNSMLGAYFQNGFWEEGLKLYILMLRQEVRPDWITFVTTIRACSELA 374
F +M RNV+SWN+++ Y QNG EE L L+ L+ R+ V P +F ++AC++LA
Sbjct: 342 LMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLA 401
Query: 375 IAKLGTQIVSQVVK------AGLGSDVSVANSAITLYSRCGNIEEAQTIFDSIQEKNLIS 434
LG Q V+K +G D+ V NS I +Y +CG +EE +F + E++ +S
Sbjct: 402 ELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVS 461
Query: 435 WNSIMGGYAQNGLGREVIEVFQNMLMVGCKPDHITFVAVLSGCSHSGLVEEAKHYFNSMT 494
WN+++ G+AQNG G E +E+F+ ML G KPDHIT + VLS C H+G VEE +HYF+SMT
Sbjct: 462 WNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMT 521
Query: 495 RDFSISATPEHFACMVDLFGRAGLLKQAMDVIDQMPFTPNVAIWGALLSASRIHHDTEMA 554
RDF ++ +H+ CMVDL GRAG L++A +I++MP P+ IWG+LL+A ++H + +
Sbjct: 522 RDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLG 581
Query: 555 ELAVKNLLALNTENSESYILLANVYSSTGRLECVSDVRQVMREKGVQKDPGCSWIEVCNR 614
+ + LL + NS Y+LL+N+Y+ G+ E V +VR+ MR++GV K PGCSWI++
Sbjct: 582 KYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGH 641
Query: 615 VHVFTVNDTDHPLIKDIYKALEDIVKKIKDDHGYVDASS 646
HVF V D HP K I+ L+ ++ +++ + + + S
Sbjct: 642 DHVFMVKDKSHPRKKQIHSLLDILIAEMRPEQDHTEIGS 679
BLAST of Sed0008978 vs. TAIR 10
Match:
AT4G13650.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 491.9 bits (1265), Expect = 8.8e-139
Identity = 253/731 (34.61%), Postives = 405/731 (55.40%), Query Frame = 0
Query: 1 MACSNLGYARIALQLHGLIEKYGIGNNEAVQNSVIDMYVKCGSVYAAEEVFLRIEKPSLF 60
+ACS G QLH K G +N ++ +++++Y KC + A + FL E ++
Sbjct: 397 VACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVV 456
Query: 61 SWNSMIYGYSKLQKVGKALDTFIQMPERDSVSWNTIISAFSQHGLHTQSLSMFVEMWIQD 120
WN M+ Y L + S +F +M I++
Sbjct: 457 LWNVMLVAYGLLDDL-------------------------------RNSFRIFRQMQIEE 516
Query: 121 CQPNPMTYASVLSACANIYDLQWGKHLHARIVRFEPFLDVLVGNGLVDMYAKCGLIEASK 180
PN TY S+L C + DL+ G+ +H++I++ L+ V + L+DMYAK G ++ +
Sbjct: 517 IVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAW 576
Query: 181 KVFNLLTKRNVVTWTSLISGIVQFGSREEVYDIFYRMREDCVAMDDFILATILGVCEGEE 240
+ ++VV+WT++I+G Q+ ++ F +M + + D+ L + C G +
Sbjct: 577 DILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQ 636
Query: 241 NISIGEQLHAFTVKAGMNSSVPVGNATVSMYAKCGEIGKASLAFESMAARDVISWTTMIT 300
+ G+Q+HA +G +S +P NA V++Y++CG+I ++ LAFE A D I+W +++
Sbjct: 637 ALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVS 696
Query: 301 AFTHNGDVQKAQDYFDRMPARNVISWNSMLGAYFQNGFWEEGLKLYILMLRQEVRPDWIT 360
F Q+G EE L++++ M R+ + + T
Sbjct: 697 GFQ-------------------------------QSGNNEEALRVFVRMNREGIDNNNFT 756
Query: 361 FVTTIRACSELAIAKLGTQIVSQVVKAGLGSDVSVANSAITLYSRCGNIEEAQTIFDSIQ 420
F + ++A SE A K G Q+ + + K G S+ V N+ I++Y++CG+I +A+ F +
Sbjct: 757 FGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVS 816
Query: 421 EKNLISWNSIMGGYAQNGLGREVIEVFQNMLMVGCKPDHITFVAVLSGCSHSGLVEEAKH 480
KN +SWN+I+ Y+++G G E ++ F M+ +P+H+T V VLS CSH GLV++
Sbjct: 817 TKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIA 876
Query: 481 YFNSMTRDFSISATPEHFACMVDLFGRAGLLKQAMDVIDQMPFTPNVAIWGALLSASRIH 540
YF SM ++ +S PEH+ C+VD+ RAGLL +A + I +MP P+ +W LLSA +H
Sbjct: 877 YFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVH 936
Query: 541 HDTEMAELAVKNLLALNTENSESYILLANVYSSTGRLECVSDVRQVMREKGVQKDPGCSW 600
+ E+ E A +LL L E+S +Y+LL+N+Y+ + + + RQ M+EKGV+K+PG SW
Sbjct: 937 KNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSW 996
Query: 601 IEVCNRVHVFTVNDTDHPLIKDIYKALEDIVKKIKDDHGYVDASSS-------------I 660
IEV N +H F V D +HPL +I++ +D+ K+ + GYV S I
Sbjct: 997 IEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKR-ASEIGYVQDCFSLLNELQHEQKDPII 1056
Query: 661 GYHSEKLAIAFGLISLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHL 719
HSEKLAI+FGL+SLP +PI+VMKNLRVCNDCH +K +S VS R+++VRD +RFHH
Sbjct: 1057 FIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHF 1064
BLAST of Sed0008978 vs. TAIR 10
Match:
AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 483.4 bits (1243), Expect = 3.1e-136
Identity = 232/657 (35.31%), Postives = 400/657 (60.88%), Query Frame = 0
Query: 78 ALDTFIQMPERDSVSWNTIISAFSQHGLHTQSLSMFVEMWIQ-DCQPNPMTYASVLSACA 137
A F ++P+ +S +WNT+I A++ S+ F++M + C PN T+ ++ A A
Sbjct: 83 ARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAA 142
Query: 138 NIYDLQWGKHLHARIVRFEPFLDVLVGNGLVDMYAKCGLIEASKKVFNLLTKRNVVTWTS 197
+ L G+ LH V+ DV V N L+ Y CG ++++ KVF + +++VV+W S
Sbjct: 143 EVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNS 202
Query: 198 LISGIVQFGSREEVYDIFYRMREDCVAMDDFILATILGVCEGEENISIGEQLHAFTVKAG 257
+I+G VQ GS ++ ++F +M + V + +L C N+ G Q+ ++ +
Sbjct: 203 MINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENR 262
Query: 258 MNSSVPVGNATVSMYAKCGEIGKASLAFESMAARDVISWTTMITAFTHNGDVQKAQDYFD 317
+N ++ + NA + MY KCG I A F++M +D ++WTTM+ + + D + A++ +
Sbjct: 263 VNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLN 322
Query: 318 RMPARNVISWNSMLGAYFQNGFWEEGLKLY-ILMLRQEVRPDWITFVTTIRACSELAIAK 377
MP +++++WN+++ AY QNG E L ++ L L++ ++ + IT V+T+ AC+++ +
Sbjct: 323 SMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALE 382
Query: 378 LGTQIVSQVVKAGLGSDVSVANSAITLYSRCGNIEEAQTIFDSIQEKNLISWNSIMGGYA 437
LG I S + K G+ + V ++ I +YS+CG++E+++ +F+S++++++ W++++GG A
Sbjct: 383 LGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLA 442
Query: 438 QNGLGREVIEVFQNMLMVGCKPDHITFVAVLSGCSHSGLVEEAKHYFNSMTRDFSISATP 497
+G G E +++F M KP+ +TF V CSH+GLV+EA+ F+ M ++ I
Sbjct: 443 MHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEE 502
Query: 498 EHFACMVDLFGRAGLLKQAMDVIDQMPFTPNVAIWGALLSASRIHHDTEMAELAVKNLLA 557
+H+AC+VD+ GR+G L++A+ I+ MP P+ ++WGALL A +IH + +AE+A LL
Sbjct: 503 KHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLE 562
Query: 558 LNTENSESYILLANVYSSTGRLECVSDVRQVMREKGVQKDPGCSWIEVCNRVHVFTVNDT 617
L N +++LL+N+Y+ G+ E VS++R+ MR G++K+PGCS IE+ +H F D
Sbjct: 563 LEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDN 622
Query: 618 DHPLIKDIYKALEDIVKKIKDDHGYVDASS--------------SIGYHSEKLAIAFGLI 677
HP+ + +Y L ++++K+K +GY S S+ HSEKLAI +GLI
Sbjct: 623 AHPMSEKVYGKLHEVMEKLK-SNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLI 682
Query: 678 SLPDWMPIHVMKNLRVCNDCHQVMKLISLVSMRKLVVRDGHRFHHLKDGICSCGDYW 719
S I V+KNLRVC DCH V KLIS + R+++VRD +RFHH ++G CSC D+W
Sbjct: 683 STEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
BLAST of Sed0008978 vs. TAIR 10
Match:
AT4G02750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 481.5 bits (1238), Expect = 1.2e-135
Identity = 252/700 (36.00%), Postives = 410/700 (58.57%), Query Frame = 0
Query: 32 NSVIDMYVKCGSVYAAEEVFLRIEKPSLFSWNSMIYGYSKLQKVGKALDTFIQMPERDSV 91
N +I Y++ G A ++F + + L SWN MI GY + + +GKA + F MPERD
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVC 158
Query: 92 SWNTIISAFSQHGLHTQSLSMFVEMWIQDCQPNPMTYASVLSACANIYDLQWGKHLHARI 151
SWNT++S ++Q+G + S+F M + N +++ ++LSA ++ +
Sbjct: 159 SWNTMLSGYAQNGCVDDARSVFDRM----PEKNDVSWNALLSAYVQNSKMEEA----CML 218
Query: 152 VRFEPFLDVLVGNGLVDMYAKCGLIEASKKVFNLLTKRNVVTWTSLISGIVQFGSREEVY 211
+ ++ N L+ + K I +++ F+ + R+VV+W ++I+G Q G +E
Sbjct: 219 FKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEAR 278
Query: 212 DIFYRMREDCVAMDDFILATILGVCEGEENISIGEQLHAFTVKAGMNSSVPVGNATVSMY 271
+F ++ D F T + G + E+ K + V NA ++ Y
Sbjct: 279 QLF----DESPVQDVF---TWTAMVSGYIQNRMVEEARELFDKMPERNEVS-WNAMLAGY 338
Query: 272 AKCGEIGKASLAFESMAARDVISWTTMITAFTHNGDVQKAQDYFDRMPARNVISWNSMLG 331
+ + A F+ M R+V +W TMIT + G + +A++ FD+MP R+ +SW +M+
Sbjct: 339 VQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIA 398
Query: 332 AYFQNGFWEEGLKLYILMLRQEVRPDWITFVTTIRACSELAIAKLGTQIVSQVVKAGLGS 391
Y Q+G E L+L++ M R+ R + +F + + C+++ +LG Q+ ++VK G +
Sbjct: 399 GYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYET 458
Query: 392 DVSVANSAITLYSRCGNIEEAQTIFDSIQEKNLISWNSIMGGYAQNGLGREVIEVFQNML 451
V N+ + +Y +CG+IEEA +F + K+++SWN+++ GY+++G G + F++M
Sbjct: 459 GCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMK 518
Query: 452 MVGCKPDHITFVAVLSGCSHSGLVEEAKHYFNSMTRDFSISATPEHFACMVDLFGRAGLL 511
G KPD T VAVLS CSH+GLV++ + YF +MT+D+ + +H+ACMVDL GRAGLL
Sbjct: 519 REGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLL 578
Query: 512 KQAMDVIDQMPFTPNVAIWGALLSASRIHHDTEMAELAVKNLLALNTENSESYILLANVY 571
+ A +++ MPF P+ AIWG LL ASR+H +TE+AE A + A+ ENS Y+LL+N+Y
Sbjct: 579 EDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLY 638
Query: 572 SSTGRLECVSDVRQVMREKGVQKDPGCSWIEVCNRVHVFTVNDTDHPLIKDIYKALEDIV 631
+S+GR V +R MR+KGV+K PG SWIE+ N+ H F+V D HP +I+ LE++
Sbjct: 639 ASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELD 698
Query: 632 KKIKDDHGYVDASS-------------SIGYHSEKLAIAFGLISLPDWMPIHVMKNLRVC 691
++K GYV +S + YHSE+LA+A+G++ + PI V+KNLRVC
Sbjct: 699 LRMK-KAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVC 758
Query: 692 NDCHQVMKLISLVSMRKLVVRDGHRFHHLKDGICSCGDYW 719
DCH +K ++ ++ R +++RD +RFHH KDG CSCGDYW
Sbjct: 759 EDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_038894464.1 | 0.0e+00 | 87.45 | pentatricopeptide repeat-containing protein At2g13600-like isoform X2 [Benincasa... | [more] |
| XP_038894463.1 | 0.0e+00 | 87.45 | pentatricopeptide repeat-containing protein At2g13600-like isoform X1 [Benincasa... | [more] |
| XP_023520697.1 | 0.0e+00 | 87.31 | pentatricopeptide repeat-containing protein At2g13600-like isoform X1 [Cucurbita... | [more] |
| XP_023520702.1 | 0.0e+00 | 87.31 | pentatricopeptide repeat-containing protein At2g13600-like isoform X2 [Cucurbita... | [more] |
| XP_023520703.1 | 0.0e+00 | 87.31 | pentatricopeptide repeat-containing protein At2g13600-like isoform X3 [Cucurbita... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Q9SHZ8 | 4.7e-145 | 37.35 | Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX... | [more] |
| Q9SIT7 | 2.0e-143 | 39.28 | Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX... | [more] |
| Q9SVP7 | 1.2e-137 | 34.61 | Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX... | [more] |
| O82380 | 4.4e-135 | 35.31 | Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... | [more] |
| Q9SY02 | 1.7e-134 | 36.00 | Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1EIC0 | 0.0e+00 | 87.03 | pentatricopeptide repeat-containing protein At2g13600-like OS=Cucurbita moschata... | [more] |
| A0A6J1I7S2 | 0.0e+00 | 86.19 | pentatricopeptide repeat-containing protein At2g13600-like isoform X1 OS=Cucurbi... | [more] |
| A0A6J1IDK4 | 0.0e+00 | 86.19 | pentatricopeptide repeat-containing protein At2g13600-like isoform X3 OS=Cucurbi... | [more] |
| A0A6J1IC44 | 0.0e+00 | 86.19 | pentatricopeptide repeat-containing protein At2g13600-like isoform X2 OS=Cucurbi... | [more] |
| A0A6J1CM06 | 0.0e+00 | 85.91 | pentatricopeptide repeat-containing protein At2g13600-like OS=Momordica charanti... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT2G22070.1 | 3.3e-146 | 37.35 | pentatricopeptide (PPR) repeat-containing protein | [more] |
| AT2G13600.1 | 1.4e-144 | 39.28 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT4G13650.1 | 8.8e-139 | 34.61 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT2G29760.1 | 3.1e-136 | 35.31 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT4G02750.1 | 1.2e-135 | 36.00 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
