Sed0008411 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCAACGGAGTCGTCTAGTTCTGCACGAAAAGGTGAGCTTGTTTGACGATATATGAACAAACCCATCTTCAATTCGAGCTTATTCAGCCATATTTTGATGAATTGAACATTCAAACTTTATACAATCTTCAGGCTTGGTTGATCTGACACAAAAGGAGAATTTTTTTACAATTTCTGTTTGATCAGAATGTTTTCTTATTTTGATTTTGGATCAAGATTTATGTTGATTTATTTGGTTTTGTTTTTGTTAGTGGTTATTCTGCTGAGAGCTACTGGGGATGCTCCCATTCTCAAACAAGCCAAATTCAAGGTTTGTTATGCGTTAATTTTTGTCAGTTAATGGATTTTAAACCTTCTTCGTAAATTAGCCTTCTGGACTTGCTCTAAGGCTTATTTCTGAGCTTTCATTTGATGACATGAGCGCCAACCTTAGTCGCCCGCTGCCAATCCTCAGCTGGTGTCGCATAAATTCATCCGCCATTAATCAGTACATAACCATTAGCCAAAATGCCATTGAACTCAAACAAATTCACGCCCTTCTGATCAAATCAGCAGCCAAAGCCCACCTTCTCCGCCGTCTCTTCACCCGGATGCTTCAGTTTCCATGGGACAACTCGTTCTACGCGCACCACCTGTTTGATGAAATACCTGACAGCAAAGATCAGTTCACTTGGTCCTCTCTCATTCGCTATTATTTTCACCATTACCATTTTGGCCAATCCTTATCCTTGTATGCTAAGATGCATCAGGCAGGCGTTATGGAATCGGAGTTTACATTCTCTTCAGTGCTCTCGGCATGCGCTCGTATGCCAGCAGTGTCGGAAGGAAGGCAAGTTCATGCTAGGGTCATGCAGTTGGGTTTCTTGGGTAATAAGATTGTGCAAACTTCGCTGATGGATATGTATGCTAAATGTGGATTCATAATGGATGCTAGGAGTGTGTTTATTTTGATTTATGATAAGGACATTGTTGCTTGTACTTGTATGATTCGAGGATATACTAAGCTGGGGATGATGGAAGATGCCCACGAGTTGTTTGATAAAATGGGGCAGCGGAATTCGTTTTCTTGGGCAACCATGGTGGCGGGGTATGCCAACCGCGGGGACATGAAAGCGGCAAAGCAGTTGTATGATGCAATGCCAGAGAGAAATCCAGTCTCGTGGCTCACTATGATAGCAGGTTATGGGAGGTATGGTGATGTGGTAGGGGCCGAAAGGATCTTCAGTGAAATATCGAGAGCAGATGCATCGTGTTGTGCAGCAATGGTGGCTTGTTATTCTCAAAATGGGTATGCAAAAGAGGCCATTGAATTGTATAAGAAAATGAAAGAAGAAGATATGGAAACCAATGAGGTAGCAATTGTTGGAGCAATATCGGCTTGTGTTAAACTACAGGATGTTGAGATGGCGAGCAAATTAATAAACCAAGTTGAAGAAGGGTGTTGTGGTAAGTTCATTAGACTATATTCAGGGTCAAAGGCATCTAACATGTTGATTAAAAATCTTTGAAGATCATCACTTAGAATACAATATTATAATCCGATCACTTAGGGTGTTTTTGGGGCAACGGATGAGTTATTATAAATGATGGATAATCATAAAAAGATGTTATCATAATAGGAGAGGTTATAATAACCTGCATTTGAGGCTCATGCTATTATAACAGAGATTATTATAACCTGTGTTTTGGGTATGGGTTATTATAGTAGCGAGTTGTATTATAGTGGGGTTTTTTTATAATCGAAAATCAAAGATTCACTCCTCTGCATACTCAGGAGCACTTGCACCTCCCAAAGTCCAAACCCAAGAGACGATAAGAGATTTTACAACTAAGCTTACTTGTAAGTTTCGAACCTGGGATAGGACATCCAAAGGAGCATACCTTGAAGCCTCAAGGCTCTACCAACAAGGTCGCATCTTGGGGACATTATATCAGAGTTATTATAGTAACATAGTTGGATGGTAATTATAGTTGGAATGAGTGCTTATGGGCTAACTCACCGGTTATTATAACCCAATCTTACCCACCCTTAAATGGAGACACAAACGCCCTTTTTAAGTTTAACTAATATGATAGAATGTAGAATATTTAAAACCTAGAAGTCAATAGAGGCTCTAATCTAAAATGTAGATGCTAACGTTTTGTTGCAGATAGAAATCTCTTCGTGTCGAATGCACTGATCCACCTACATTCAAAATTTGGCAATATAGAAAAGGCACAAGAAGAATTCCACAAAATGAAGGATAGAGATGTAGTAACTTACAGTACGTTGATCACATGCCTTGCTGACCATGGAAAAGGCCATGAAGCCTTGAATCTCTTCTCCAAGATGCAAGAAGAAGGTATAAAGCCAAACCAAGTTTGTTTCACTGGTGTACTAAATGCATGTGGCCATGCAGGGATGATTGAACAAGGATGCAAGAATTTTGAGCTTATGAACAAGGTTTTCGGCATTGAGCCGCTAAAGGAGCATTATGCGTGCATGGTTGATCTCCTAGGAAGAGTTGGTGAGGTTGAAATGGCATACAGTCTGATTAAAGATAAGGTAAGGGAAGTTGATGCTAAAACATGGGGGTCATTGCTTGGAGCTTGCAAGATCCATGGTAATGTGGAGTTGGGGGAGATTGCTGCAAGGCATCTATTTGAAATGGAGCCTGAGAATTCAGGAAATTATGTGCTTTTGGCAAATACATATGCTCAGAGAAAGGAGTGGGATGGAGCAGAGAGGGTTAGGAACATGATGGTTGAAAGAGGAATCAGAAAATCTCCCGCGTATAGTTGGATTTCAATATCTACCTGAATGGTCGAGGTATGTAAGTTAGTCTGGACACTCACGAATATCTCATATCAAGAATCAAGATTTTACATTCTTATGGAGAAGCTTCACTGGCAGATATAGAAGAGGAGGACACGGGTATAGACCCAACTTACTATTGCCTATTCTTTTTCATGGTTAGCAGAACATGGATTGCTTGTTTTACCTATGGCGTCATCCAACAAGACCTTGCCGCATGAAAACTAAAACCAAATGGATAAGGGCGCTACAAAATATTTATAACTCAATCCAATACAACACAAATTCAGAGTCTGTACATGAAGATCGGGGTCAAGTTCAATGAATATGTCTCCATTTGTATCTTATTGGGAAGATTAGAACAATTTCTTCTGCGTTACAGATTATTTTTTAAACAAGAGTATTATCCTACACAGTTTTGGAAAGTCACACAACCACCCAACTTTGCAAACCTTGAATTGATATCACCCATCGATGGCCCATCCTATCATCACTACTTGGAACACAGGGATAAGGGAATAACTTTAAAAGCTTTTTTGGCACTTTTTTGGGCTATCACTAAAACCAATTCTTTTAGACAGAATTGAATATTGGGTTATGTTCTTTTAGGTCTTTCTTGGACGGCCCTTTATTGTTTTTAAGGTTAAAATACCATTTTGGTCCCTCAACTTTGGGATTTGTTCCATTTTGGTCCCTAGACTTTCAAATGTTCATTTTTAGTCCCTTGACTTTGTAGTTTGTTCAATTTTGGTCCCTTGACTTTTCTGTTTGTCCAATTTTGGTCCCTCGACTTTCAAATGTCCAAATTTAGTCCCTACACTATCAAAAAATGTCAAAAATGGTCCTTTGGTCAAATAATTTTTTTTTTCACTCCTAAATTATTTTCTCTCTCTTCCATCTTTCATCATTTCTCCTTCTAAAAGTTTCATCTCTTTTAAATCCACCTCTCTAATCCTTTTCTCTTCTTTTTTTCTCATATTCTCTCCTCAATCCATCTCATCAAATTATTTAACATGAGATAATTTTTCTAAATAATAATTTTCTTACTTTGATTTGTCACTTTTTATTTTCTAAAATTCATAGTCTACCATGGAACAAAAAAGAAAAAGAAAGAAAATAAAGACGAAAAAAAGAAAAGAAAAGAGGGGAAGAGAGGTAAAATTTCTAGAGAGAGAAATTATGAAAGATGAAAGAGAGAAAATAATTTAGGAGTGATAAAAAATTCATTTGACCAAAGGACAATTTTTGAACTTTTTTTATAGTCTAAGGACCAAATTTTAAAACATTTAAAAATTGAGGGACCAAAATTAGACAAATAGCAAAGTTGAGGGACCAAAATTGGACATTTGAAAGTTGAGGGACCAAAATTGGACAAACAACAAAGTTGAGGGACTAAAATTGGACATTTGAAAGTTGAGAGACCAAAATGGAACAAACCCCAAAATCGAGGGACCAAAATGATATTTTAACCTTGTTTTTATCTTATTATGCCTCAGTATGAGAGTTTCCATAGTTAATATCTCCTATTCTTGCCATTTCAGTTTTTTTCTTTTAGTTTTGTTCTTCTAGTTTTTATAGGTCTTTGTAACACTTGCATCTATCTATGGAATGTTTTGTTTCCTATCCCAAAAAAAAAAAGATTTCTTTTGAACTAATATGGTGTTCTTAGATTATTTTTATGCAGAACATCAACATTTGCCAAGTCAGTATTAGCAGACAAAAATGTATTTAGAATTGGTGTATGGGCGGGCATGTTTGGCAGTGATGTTTTCATGTCCAGGATCATTTTACTTTTGCAACTAACTTATTCAAAATCAAATGCTAATATGATTATATGAAAAAACACTTCCAAAAGGAATGAAGCTTAATCTCTGTTCTCACATATGTATTAGATCTCATGGATGCAATACCACATCCTTGTACTGTATAAAATTCACATTGCCATCACTATATGGTTTGGACTGGATTAGCACAAACTTTATTGATTATGACAACTTGAGGGAACTTTCATAAGATAACTGATGAAATAAATTATATGATTAATGGGTGTTTTTTCTGAAAAAGAGTTGTGCTGTTATATAAAATCTGGAATAAACTTTTGAAATGAACGGTCTTAGAATGTGTAATTTGTGCAAGAAAATTTACAACAGCTCTTCTAAAGTTTCTCTTTTTTGGAACTTTTTTTAACTCTTTTTTGGTACTTGATTTACCGTATTTGTAAATTTTTGGTCATTGACATATTGCATACACTTGGCAGATGTCTGGAACTGACAAATTTATTAAAGTTATTGATTACATACGCCGGTCAATTCAACGAGAAACCTTGGTATTCATCTGAGTTCTTGAAATAGTCTCTCTTTTGTCTGCCAATTCATTTTTAACTAACGACACTTCACTATGCTAATTGTTTATATTCTTTGAAGTTTGTCTTTGTCAATAGTGCATTCTCGCCAGGTCCAGATGAGACAGTTATTGATCTATACAATGTGAGTTGATATTAACTTATTGCTTGTATTTATGTTCAAGTTGCATTTGTATACTGTTTACATTAAATTTTTAGGAGAAGAAAAGGAGGTGGTGGGGAATTTATTTTCAGAAGAATTAGTTGGACAATGGAAATATCTTTAAAAGGCTCTATTGGGTAGTCAAAAGTTGTCATCTTCTTCATTGAAAGTGTTGTGTAGACTTCTGATGTTGTTGTTGGTCATGAATCATTCTTGAAATCACCTATCATCGGATATTCTTAGTAGGTGAATGAAAAAGACTCCAGCAATCTAGATTTGAAAACTTTCTGAAGCATGGATAAAATTGTCATCTTCTTCATTGAAAGTGTAGTGTAGACTTCTGATGTTGTTGTTGGCTGATATACACAAGTTTTGTTAGATTTTCTTAAATGAAGCATCAGATGAGTACCCTTCAATGTTTTAGACATCAGTTTTTTTATCACCTTTCTCTGAGGGTTGTGTATGGATAAAATCGATCAGACTTCATTGCAGTTTTTCAATCTGTTTAGCTTATTACCTAAGAATAAATATATGGTTTTTCATATCCACACGAGTTTAAAGTTTTCTCAAGTCCTGGTAGCTGATACGATCCCGAGATCATTGAAAGTTTATTCAAGGCGGACCAAGAAGTGACGGATCTATTTTATTATTATTTTTAAATATAATTCTGTTTTAGCTATTTAAGTTGTATTGGGCTTTTGGGCCTTATTAGGGCTATTTACTAAATTAGGTTAAATCCTATGATTACTATAAATAGGATATGATAGGTCACTAGGACATTCATTCAGTTATCATCTTTGTACTCTGGCTCTTTGAGAGATTCTCTCGAGAGATTTATCGTAGTTAATAAAATAGTGTGGTAGTTTCTATCAATAGCTAGGTATCTTGTTGATTATATTTTTCCTGTTCCTACTTGCAGAACTTTGGAATTGATGGGAAGTTGGTGGTAAATTATGCCTGCTCCATGGCTTGGGGCTAA ATGGCTTCAACGGAGTCGTCTAGTTCTGCACGAAAAGTGGTTATTCTGCTGAGAGCTACTGGGGATGCTCCCATTCTCAAACAAGCCAAATTCAAGATGTCTGGAACTGACAAATTTATTAAAGTTATTGATTACATACGCCGGTCAATTCAACGAGAAACCTTGTTTGTCTTTGTCAATAGTGCATTCTCGCCAGGTCCAGATGAGACAGTTATTGATCTATACAATAACTTTGGAATTGATGGGAAGTTGGTGGTAAATTATGCCTGCTCCATGGCTTGGGGCTAA ATGGCTTCAACGGAGTCGTCTAGTTCTGCACGAAAAGTGGTTATTCTGCTGAGAGCTACTGGGGATGCTCCCATTCTCAAACAAGCCAAATTCAAGATGTCTGGAACTGACAAATTTATTAAAGTTATTGATTACATACGCCGGTCAATTCAACGAGAAACCTTGTTTGTCTTTGTCAATAGTGCATTCTCGCCAGGTCCAGATGAGACAGTTATTGATCTATACAATAACTTTGGAATTGATGGGAAGTTGGTGGTAAATTATGCCTGCTCCATGGCTTGGGGCTAA MASTESSSSARKVVILLRATGDAPILKQAKFKMSGTDKFIKVIDYIRRSIQRETLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG Homology
BLAST of Sed0008411 vs. NCBI nr
Match: XP_038878493.1 (ubiquitin-like protein ATG12 [Benincasa hispida]) HSP 1 Score: 184.1 bits (466), Expect = 5.6e-43 Identity = 91/95 (95.79%), Postives = 93/95 (97.89%), Query Frame = 0
BLAST of Sed0008411 vs. NCBI nr
Match: XP_004151012.1 (ubiquitin-like protein ATG12 [Cucumis sativus] >KGN59786.1 hypothetical protein Csa_001664 [Cucumis sativus]) HSP 1 Score: 182.6 bits (462), Expect = 1.6e-42 Identity = 90/95 (94.74%), Postives = 92/95 (96.84%), Query Frame = 0
BLAST of Sed0008411 vs. NCBI nr
Match: XP_008464001.1 (PREDICTED: ubiquitin-like protein ATG12 [Cucumis melo]) HSP 1 Score: 181.4 bits (459), Expect = 3.6e-42 Identity = 89/95 (93.68%), Postives = 92/95 (96.84%), Query Frame = 0
BLAST of Sed0008411 vs. NCBI nr
Match: XP_022955552.1 (ubiquitin-like protein ATG12 [Cucurbita moschata] >XP_023526053.1 ubiquitin-like protein ATG12 isoform X1 [Cucurbita pepo subsp. pepo] >KAG6581816.1 Ubiquitin-like protein ATG12, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018264.1 Ubiquitin-like protein ATG12 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 176.4 bits (446), Expect = 1.2e-40 Identity = 87/95 (91.58%), Postives = 91/95 (95.79%), Query Frame = 0
BLAST of Sed0008411 vs. NCBI nr
Match: XP_022153405.1 (ubiquitin-like protein ATG12 [Momordica charantia] >XP_022153406.1 ubiquitin-like protein ATG12 [Momordica charantia]) HSP 1 Score: 174.9 bits (442), Expect = 3.4e-40 Identity = 87/95 (91.58%), Postives = 90/95 (94.74%), Query Frame = 0
BLAST of Sed0008411 vs. ExPASy Swiss-Prot
Match: Q1SF86 (Ubiquitin-like protein ATG12 OS=Medicago truncatula OX=3880 GN=ATG12 PE=3 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 9.6e-38 Identity = 74/95 (77.89%), Postives = 85/95 (89.47%), Query Frame = 0
BLAST of Sed0008411 vs. ExPASy Swiss-Prot
Match: Q8S924 (Ubiquitin-like protein ATG12A OS=Arabidopsis thaliana OX=3702 GN=ATG12A PE=1 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 7.6e-35 Identity = 72/95 (75.79%), Postives = 83/95 (87.37%), Query Frame = 0
BLAST of Sed0008411 vs. ExPASy Swiss-Prot
Match: Q9LVK3 (Ubiquitin-like protein ATG12B OS=Arabidopsis thaliana OX=3702 GN=ATG12B PE=1 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 2.2e-34 Identity = 67/93 (72.04%), Postives = 82/93 (88.17%), Query Frame = 0
BLAST of Sed0008411 vs. ExPASy Swiss-Prot
Match: A2YAG8 (Ubiquitin-like protein ATG12 OS=Oryza sativa subsp. indica OX=39946 GN=ATG12 PE=3 SV=2) HSP 1 Score: 130.6 bits (327), Expect = 9.6e-30 Identity = 57/89 (64.04%), Postives = 77/89 (86.52%), Query Frame = 0
BLAST of Sed0008411 vs. ExPASy Swiss-Prot
Match: Q69NP0 (Ubiquitin-like protein ATG12 OS=Oryza sativa subsp. japonica OX=39947 GN=ATG12 PE=3 SV=2) HSP 1 Score: 130.6 bits (327), Expect = 9.6e-30 Identity = 57/89 (64.04%), Postives = 77/89 (86.52%), Query Frame = 0
BLAST of Sed0008411 vs. ExPASy TrEMBL
Match: A0A0A0LIA6 (Ubiquitin-like protein ATG12 OS=Cucumis sativus OX=3659 GN=Csa_3G846020 PE=3 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 7.9e-43 Identity = 90/95 (94.74%), Postives = 92/95 (96.84%), Query Frame = 0
BLAST of Sed0008411 vs. ExPASy TrEMBL
Match: A0A1S3CKI1 (Ubiquitin-like protein ATG12 OS=Cucumis melo OX=3656 GN=LOC103501992 PE=3 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 1.8e-42 Identity = 89/95 (93.68%), Postives = 92/95 (96.84%), Query Frame = 0
BLAST of Sed0008411 vs. ExPASy TrEMBL
Match: A0A6J1GTZ1 (Ubiquitin-like protein ATG12 OS=Cucurbita moschata OX=3662 GN=LOC111457534 PE=3 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 5.6e-41 Identity = 87/95 (91.58%), Postives = 91/95 (95.79%), Query Frame = 0
BLAST of Sed0008411 vs. ExPASy TrEMBL
Match: A0A6J1DGR5 (Ubiquitin-like protein ATG12 OS=Momordica charantia OX=3673 GN=LOC111020917 PE=3 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 1.6e-40 Identity = 87/95 (91.58%), Postives = 90/95 (94.74%), Query Frame = 0
BLAST of Sed0008411 vs. ExPASy TrEMBL
Match: A0A6J1J054 (Ubiquitin-like protein ATG12 OS=Cucurbita maxima OX=3661 GN=LOC111480033 PE=3 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 2.8e-40 Identity = 85/95 (89.47%), Postives = 91/95 (95.79%), Query Frame = 0
BLAST of Sed0008411 vs. TAIR 10
Match: AT1G54210.1 (Ubiquitin-like superfamily protein ) HSP 1 Score: 147.5 bits (371), Expect = 5.4e-36 Identity = 72/95 (75.79%), Postives = 83/95 (87.37%), Query Frame = 0
BLAST of Sed0008411 vs. TAIR 10
Match: AT3G13970.1 (Ubiquitin-like superfamily protein ) HSP 1 Score: 146.0 bits (367), Expect = 1.6e-35 Identity = 67/93 (72.04%), Postives = 82/93 (88.17%), Query Frame = 0
BLAST of Sed0008411 vs. TAIR 10
Match: AT1G54210.2 (Ubiquitin-like superfamily protein ) HSP 1 Score: 61.2 bits (147), Expect = 5.1e-10 Identity = 42/95 (44.21%), Postives = 45/95 (47.37%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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