Sed0008294 (gene) Chayote v1

Overview
NameSed0008294
Typegene
OrganismSechium edule (Chayote v1)
Descriptiontwo-component response regulator ORR4-like
LocationLG03: 6211263 .. 6212718 (-)
RNA-Seq ExpressionSed0008294
SyntenySed0008294
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACAAACAAAAACAGGGGCGGCCCACAGGTACTTGAAAATCAACAAACACCCAATTAAAGAATTGTTCAACACTCATCCTTCAAGATCCTCTCGATTCCGAATCAAATCTCTCGGATCTCACTTTTCTGAGATCCACAGATATATAATGCATAACTCCTTCAATTCCTTCTCCCAATTACCACTCCAATCTTCTTCTCTATTTCGATTTCTCTGAATCAATCAATCAATCGCGGTTGTTGCTAGCCATGGGCGTCGCTGTTGAAACCGCTCAGTTCCATGTTCTTGCCGTTGACGATAGCTTCATCGACCGGAAAGTGATCGAGCGCCTCCTCAAAACCTCCTCTTATCACGGTATTGATCGCGATTTCAATTTGTTCCACTGAAGTTTTTTCTTCTCAGATCTACGCCTAATCGGTGTTTGTTTGTTTGTTTAGTTACTGCTGTTGATTCCGGTTCCAAGGCCTTGGAATTTCTCGGTCTTGTTCAAGATCGCGATCGCGATCTCGACCTCGATGAAGAACGAGAATCCGAAATTCTCACCTCAAATCAAGTACGAAGCCCTAACTCGCGTTTCTTCCTCTGTTTCTCCTGATTTTTGTTTCTTCTTTCTCTAATTTGTTCCTGTTTTCAGGAAGTGGATGTGAATCTGATCATCACCGATTACAGTATGCCAGGAATGAGCGGCTACGAACTCCTCAGAAAGATCAAGGTTCGTCCTAATCTCATTTCCTCTTCTTGATTCTTCCGAGAAATTGTTTCAAAAAAACGAATCCAAATCCAAATCCATCAGTGGCTGATTTGTGATGCGTGTGTTTGCTTGCAGGAATCGAAATCTCTCAAAGACATACCGGTTGTGATTATGTCCTCTGAGAACGTTCCTTCGAGAATCAACAGATGCTTGGAGGATGGAGCCGAAGAGTTCTTCCTCAAACCAGTTCAATTGTCTGATGTGAGGAAGTTGAGACCTCATTTGATTAAAGAAAAATCCGCAACAAATTGATGAAGAACGTGAAGAAAACGAGAAGAATTCATCCACTAATTCTTGACTTCTCTGGTTTTAGTGATTCTGTAAAGAATTAGATCCGAAATTGATGACTGATTCGTTGCTACTAGCAAGTTCTTGACACAGATTTTCTCGGCAAACTAACGGAAAATGTATAGATCTGCTGTTCGATTTTGCCAGCTGATTTATGGAGCAACTTTTTCCTGATCTCTTCTGTTCTTATTTCTTTGTTCTGATCATTTTTGCGGAAGATGAAAGGGATTTTTGTTGAGAATTATTGTGAAGATATGGATAGAAATAGTAGTTTAATTGATAAATTTCTATCAAATTGTAAGAGACCTTAACTTTTCTCAAATGGTAATTATTTTGGCTTTGTTACATAAAAAATATTTAGTCGATAATTCAGCATTGAGATATGTCAATTACTACGGACTAATCTGGATTTGGCAATT

mRNA sequence

CACAAACAAAAACAGGGGCGGCCCACAGGTACTTGAAAATCAACAAACACCCAATTAAAGAATTGTTCAACACTCATCCTTCAAGATCCTCTCGATTCCGAATCAAATCTCTCGGATCTCACTTTTCTGAGATCCACAGATATATAATGCATAACTCCTTCAATTCCTTCTCCCAATTACCACTCCAATCTTCTTCTCTATTTCGATTTCTCTGAATCAATCAATCAATCGCGGTTGTTGCTAGCCATGGGCGTCGCTGTTGAAACCGCTCAGTTCCATGTTCTTGCCGTTGACGATAGCTTCATCGACCGGAAAGTGATCGAGCGCCTCCTCAAAACCTCCTCTTATCACGTTACTGCTGTTGATTCCGGTTCCAAGGCCTTGGAATTTCTCGGTCTTGTTCAAGATCGCGATCGCGATCTCGACCTCGATGAAGAACGAGAATCCGAAATTCTCACCTCAAATCAAGAAGTGGATGTGAATCTGATCATCACCGATTACAGTATGCCAGGAATGAGCGGCTACGAACTCCTCAGAAAGATCAAGGAATCGAAATCTCTCAAAGACATACCGGTTGTGATTATGTCCTCTGAGAACGTTCCTTCGAGAATCAACAGATGCTTGGAGGATGGAGCCGAAGAGTTCTTCCTCAAACCAGTTCAATTGTCTGATGTGAGGAAGTTGAGACCTCATTTGATTAAAGAAAAATCCGCAACAAATTGATGAAGAACGTGAAGAAAACGAGAAGAATTCATCCACTAATTCTTGACTTCTCTGGTTTTAGTGATTCTGTAAAGAATTAGATCCGAAATTGATGACTGATTCGTTGCTACTAGCAAGTTCTTGACACAGATTTTCTCGGCAAACTAACGGAAAATGTATAGATCTGCTGTTCGATTTTGCCAGCTGATTTATGGAGCAACTTTTTCCTGATCTCTTCTGTTCTTATTTCTTTGTTCTGATCATTTTTGCGGAAGATGAAAGGGATTTTTGTTGAGAATTATTGTGAAGATATGGATAGAAATAGTAGTTTAATTGATAAATTTCTATCAAATTGTAAGAGACCTTAACTTTTCTCAAATGGTAATTATTTTGGCTTTGTTACATAAAAAATATTTAGTCGATAATTCAGCATTGAGATATGTCAATTACTACGGACTAATCTGGATTTGGCAATT

Coding sequence (CDS)

ATGGGCGTCGCTGTTGAAACCGCTCAGTTCCATGTTCTTGCCGTTGACGATAGCTTCATCGACCGGAAAGTGATCGAGCGCCTCCTCAAAACCTCCTCTTATCACGTTACTGCTGTTGATTCCGGTTCCAAGGCCTTGGAATTTCTCGGTCTTGTTCAAGATCGCGATCGCGATCTCGACCTCGATGAAGAACGAGAATCCGAAATTCTCACCTCAAATCAAGAAGTGGATGTGAATCTGATCATCACCGATTACAGTATGCCAGGAATGAGCGGCTACGAACTCCTCAGAAAGATCAAGGAATCGAAATCTCTCAAAGACATACCGGTTGTGATTATGTCCTCTGAGAACGTTCCTTCGAGAATCAACAGATGCTTGGAGGATGGAGCCGAAGAGTTCTTCCTCAAACCAGTTCAATTGTCTGATGTGAGGAAGTTGAGACCTCATTTGATTAAAGAAAAATCCGCAACAAATTGA

Protein sequence

MGVAVETAQFHVLAVDDSFIDRKVIERLLKTSSYHVTAVDSGSKALEFLGLVQDRDRDLDLDEERESEILTSNQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRINRCLEDGAEEFFLKPVQLSDVRKLRPHLIKEKSATN
Homology
[Close]
BLAST of Sed0008294 vs. NCBI nr
Match: XP_022938947.1 (two-component response regulator ORR4-like [Cucurbita moschata])

HSP 1 Score: 265.0 bits (676), Expect = 4.1e-67
Identity = 139/160 (86.88%), Postives = 146/160 (91.25%), Query Frame = 0 

Query: 1   MGVAVETAQFHVLAVDDSFIDRKVIERLLKTSSYHVTAVDSGSKALEFLGLVQDRDRDLD 60
           MGVAVE+ QFHVLAVDDSFIDRK+IERLLKTSSYHVT VDSG+KALEFLGLV D D D D
Sbjct: 1   MGVAVESTQFHVLAVDDSFIDRKLIERLLKTSSYHVTVVDSGNKALEFLGLVGDHDDDDD 60

Query: 61  LDEERESEILTSN--QEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENV 120
            D+E +SEI  SN  QEVDVNLIITDYSMPGMSGY+LLRKIKESKSLKDIPVVIMSSENV
Sbjct: 61  DDDEPDSEIAPSNHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENV 120

Query: 121 PSRINRCLEDGAEEFFLKPVQLSDVRKLRPHLIKEKSATN 159
           PSRINRCLE+GAEEFFLKPVQLSDVRKLRPHLIKEKS  N
Sbjct: 121 PSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTRN 160

[Close]
BLAST of Sed0008294 vs. NCBI nr
Match: KAG7032635.1 (Two-component response regulator ARR9 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 263.1 bits (671), Expect = 1.6e-66
Identity = 137/158 (86.71%), Postives = 147/158 (93.04%), Query Frame = 0 

Query: 1   MGVAVETAQFHVLAVDDSFIDRKVIERLLKTSSYHVTAVDSGSKALEFLGLVQDRDRDLD 60
           MGVAVET +FHVLAVDDSFIDRK+IERLLKTSSYHVTAVDSG+KALEFLGLV+D D D D
Sbjct: 1   MGVAVETTRFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVEDPDLD-D 60

Query: 61  LDEERESEILTSNQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPS 120
            D+E+ S++  S QEVDVNLIITDYSMPGMSGY+LLRKIKESKSLKDIPVVIMSSENVPS
Sbjct: 61  DDDEQHSKLPPSIQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVPS 120

Query: 121 RINRCLEDGAEEFFLKPVQLSDVRKLRPHLIKEKSATN 159
           RINRCLE+GAEEFFLKPVQLSDVRKLRPHLIKEKS  N
Sbjct: 121 RINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTRN 157

[Close]
BLAST of Sed0008294 vs. NCBI nr
Match: XP_022953837.1 (two-component response regulator ORR4-like [Cucurbita moschata] >XP_022989834.1 two-component response regulator ORR4-like [Cucurbita maxima] >XP_023517916.1 two-component response regulator ORR4-like [Cucurbita pepo subsp. pepo] >KAG6601939.1 Two-component response regulator ARR9, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 262.3 bits (669), Expect = 2.7e-66
Identity = 137/162 (84.57%), Postives = 148/162 (91.36%), Query Frame = 0 

Query: 1   MGVA----VETAQFHVLAVDDSFIDRKVIERLLKTSSYHVTAVDSGSKALEFLGLVQDRD 60
           MGVA    VET +FHVLAVDDSFIDRK+IERLLKTSSYHVTAVDSG+KALEFLGLV+D D
Sbjct: 1   MGVAVAVDVETTRFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVEDPD 60

Query: 61  RDLDLDEERESEILTSNQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSE 120
            D D+D+E+ S++  S QEVDVNLIITDYSMPGMSGY+LLRKIKESKSLKDIPVVIMSSE
Sbjct: 61  LDDDVDDEQHSKLPPSIQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSE 120

Query: 121 NVPSRINRCLEDGAEEFFLKPVQLSDVRKLRPHLIKEKSATN 159
           NVPSRINRCLE+GAEEFFLKPVQLSDVRKLRPHLIKEKS  N
Sbjct: 121 NVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTRN 162

[Close]
BLAST of Sed0008294 vs. NCBI nr
Match: XP_022993798.1 (two-component response regulator ORR4-like [Cucurbita maxima])

HSP 1 Score: 257.7 bits (657), Expect = 6.6e-65
Identity = 137/160 (85.62%), Postives = 144/160 (90.00%), Query Frame = 0 

Query: 1   MGVAVETAQFHVLAVDDSFIDRKVIERLLKTSSYHVTAVDSGSKALEFLGLVQDRDRDLD 60
           MGVAVE+ QFHVLAVDDSFIDRK+IERLLKTSSYHVT VDSG+KALEFLGL  D D D  
Sbjct: 1   MGVAVESTQFHVLAVDDSFIDRKLIERLLKTSSYHVTVVDSGNKALEFLGLDGDHDDD-- 60

Query: 61  LDEERESEILTSN--QEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENV 120
            D+E +SEI  SN  QEVDVNLIITDYSMPGMSGY+LLRKIKESKSLKDIPVVIMSSENV
Sbjct: 61  -DDEPDSEIAPSNHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENV 120

Query: 121 PSRINRCLEDGAEEFFLKPVQLSDVRKLRPHLIKEKSATN 159
           PSRINRCLE+GAEEFFLKPVQLSDVRKLRPHLIKEKS  N
Sbjct: 121 PSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTRN 157

[Close]
BLAST of Sed0008294 vs. NCBI nr
Match: XP_023550008.1 (two-component response regulator ORR4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 256.9 bits (655), Expect = 1.1e-64
Identity = 136/160 (85.00%), Postives = 144/160 (90.00%), Query Frame = 0 

Query: 1   MGVAVETAQFHVLAVDDSFIDRKVIERLLKTSSYHVTAVDSGSKALEFLGLVQDRDRDLD 60
           MGVAVE+ +FHVLAVDDSFIDRK+IERLLKTSSYHVT VDSG+KALEFLGLV D D    
Sbjct: 1   MGVAVESTRFHVLAVDDSFIDRKLIERLLKTSSYHVTVVDSGNKALEFLGLVGDHDD--- 60

Query: 61  LDEERESEILTSN--QEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENV 120
            D+E +SEI  SN  QEVDVNLIITDYSMPGMSGY+LLRKIKESKSLKDIPVVIMSSENV
Sbjct: 61  -DDETDSEIAPSNHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENV 120

Query: 121 PSRINRCLEDGAEEFFLKPVQLSDVRKLRPHLIKEKSATN 159
           PSRINRCLE+GAEEFFLKPVQLSDVRKLRPHLIKEKS  N
Sbjct: 121 PSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTRN 156

[Close]
BLAST of Sed0008294 vs. ExPASy Swiss-Prot
Match: B8BLZ4 (Two-component response regulator ORR10 OS=Oryza sativa subsp. indica OX=39946 GN=RR10 PE=2 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 4.8e-50
Identity = 103/154 (66.88%), Postives = 123/154 (79.87%), Query Frame = 0 

Query: 1   MGVAVETAQFHVLAVDDSFIDRKVIERLLKTSSYHVTAVDSGSKALEFLGLVQDRDRDLD 60
           M VA+E A FHVLAVDDS  DRK+IERLLKTSS+ VT VDSGSKALEFLGL    D  + 
Sbjct: 1   MAVAIE-APFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPIS 60

Query: 61  LDEERESEILTSNQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPS 120
              ++        QEV VNLIITDY MPGM+GY+LL+KIKES  L+DIPVVIMSS+N+PS
Sbjct: 61  TQSDQ--------QEVGVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPS 120

Query: 121 RINRCLEDGAEEFFLKPVQLSDVRKLRPHLIKEK 155
           RINRCLE+GA+EFFLKPV+LSD+ KL+PH++K +
Sbjct: 121 RINRCLEEGADEFFLKPVRLSDMSKLKPHILKSR 145

[Close]
BLAST of Sed0008294 vs. ExPASy Swiss-Prot
Match: Q2QXY3 (Two-component response regulator ORR10 OS=Oryza sativa subsp. japonica OX=39947 GN=RR10 PE=2 SV=2)

HSP 1 Score: 198.7 bits (504), Expect = 4.8e-50
Identity = 103/154 (66.88%), Postives = 123/154 (79.87%), Query Frame = 0 

Query: 1   MGVAVETAQFHVLAVDDSFIDRKVIERLLKTSSYHVTAVDSGSKALEFLGLVQDRDRDLD 60
           M VA+E A FHVLAVDDS  DRK+IERLLKTSS+ VT VDSGSKALEFLGL    D  + 
Sbjct: 1   MAVAIE-APFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPIS 60

Query: 61  LDEERESEILTSNQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPS 120
              ++        QEV VNLIITDY MPGM+GY+LL+KIKES  L+DIPVVIMSS+N+PS
Sbjct: 61  TQSDQ--------QEVGVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPS 120

Query: 121 RINRCLEDGAEEFFLKPVQLSDVRKLRPHLIKEK 155
           RINRCLE+GA+EFFLKPV+LSD+ KL+PH++K +
Sbjct: 121 RINRCLEEGADEFFLKPVRLSDMSKLKPHILKSR 145

[Close]
BLAST of Sed0008294 vs. ExPASy Swiss-Prot
Match: Q4GZK2 (Two-component response regulator ORR9 OS=Oryza sativa subsp. indica OX=39946 GN=RR9 PE=2 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 6.2e-50
Identity = 103/154 (66.88%), Postives = 123/154 (79.87%), Query Frame = 0 

Query: 1   MGVAVETAQFHVLAVDDSFIDRKVIERLLKTSSYHVTAVDSGSKALEFLGLVQDRDRDLD 60
           M VA+E A FHVLAVDDS  DRK+IERLLKTSS+ VT VDSGSKALEFLGL    D  + 
Sbjct: 1   MAVAIE-APFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPIS 60

Query: 61  LDEERESEILTSNQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPS 120
              ++        QEV VNLIITDY MPGM+GY+LL+KIKES  L+DIPVVIMSS+N+PS
Sbjct: 61  TQSDQ--------QEVAVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPS 120

Query: 121 RINRCLEDGAEEFFLKPVQLSDVRKLRPHLIKEK 155
           RINRCLE+GA+EFFLKPV+LSD+ KL+PH++K +
Sbjct: 121 RINRCLEEGADEFFLKPVRLSDMSKLKPHILKSR 145

[Close]
BLAST of Sed0008294 vs. ExPASy Swiss-Prot
Match: Q2RAP3 (Two-component response regulator ORR9 OS=Oryza sativa subsp. japonica OX=39947 GN=RR9 PE=2 SV=2)

HSP 1 Score: 198.4 bits (503), Expect = 6.2e-50
Identity = 103/154 (66.88%), Postives = 123/154 (79.87%), Query Frame = 0 

Query: 1   MGVAVETAQFHVLAVDDSFIDRKVIERLLKTSSYHVTAVDSGSKALEFLGLVQDRDRDLD 60
           M VA+E A FHVLAVDDS  DRK+IERLLKTSS+ VT VDSGSKALEFLGL    D  + 
Sbjct: 1   MAVAIE-APFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPIS 60

Query: 61  LDEERESEILTSNQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPS 120
              ++        QEV VNLIITDY MPGM+GY+LL+KIKES  L+DIPVVIMSS+N+PS
Sbjct: 61  TQSDQ--------QEVAVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPS 120

Query: 121 RINRCLEDGAEEFFLKPVQLSDVRKLRPHLIKEK 155
           RINRCLE+GA+EFFLKPV+LSD+ KL+PH++K +
Sbjct: 121 RINRCLEEGADEFFLKPVRLSDMSKLKPHILKSR 145

[Close]
BLAST of Sed0008294 vs. ExPASy Swiss-Prot
Match: O80366 (Two-component response regulator ARR9 OS=Arabidopsis thaliana OX=3702 GN=ARR9 PE=1 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 1.8e-49
Identity = 102/154 (66.23%), Postives = 126/154 (81.82%), Query Frame = 0 

Query: 1   MGVAVETAQFHVLAVDDSFIDRKVIERLLKTSSYHVTAVDSGSKALEFLGLVQDRDRDLD 60
           MG+A E +QFHVLAVDDS  DRK+IERLL+ SS  VT VDSGSKALEFLGL Q  D +  
Sbjct: 1   MGMAAE-SQFHVLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGLRQSTDSN-- 60

Query: 61  LDEERESEILTSNQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPS 120
            D    S+   ++Q V+VNLIITDY MPGM+GY+LL+K+KES + +DIPVVIMSSENVP+
Sbjct: 61  -DPNAFSKAPVNHQVVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPA 120

Query: 121 RINRCLEDGAEEFFLKPVQLSDVRKLRPHLIKEK 155
           RI+RCLE+GAEEFFLKPV+L+D+ KL+PH++K K
Sbjct: 121 RISRCLEEGAEEFFLKPVRLADLNKLKPHMMKTK 150

[Close]
BLAST of Sed0008294 vs. ExPASy TrEMBL
Match: A0A6J1FFG9 (two-component response regulator ORR4-like OS=Cucurbita moschata OX=3662 GN=LOC111445004 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 2.0e-67
Identity = 139/160 (86.88%), Postives = 146/160 (91.25%), Query Frame = 0 

Query: 1   MGVAVETAQFHVLAVDDSFIDRKVIERLLKTSSYHVTAVDSGSKALEFLGLVQDRDRDLD 60
           MGVAVE+ QFHVLAVDDSFIDRK+IERLLKTSSYHVT VDSG+KALEFLGLV D D D D
Sbjct: 1   MGVAVESTQFHVLAVDDSFIDRKLIERLLKTSSYHVTVVDSGNKALEFLGLVGDHDDDDD 60

Query: 61  LDEERESEILTSN--QEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENV 120
            D+E +SEI  SN  QEVDVNLIITDYSMPGMSGY+LLRKIKESKSLKDIPVVIMSSENV
Sbjct: 61  DDDEPDSEIAPSNHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENV 120

Query: 121 PSRINRCLEDGAEEFFLKPVQLSDVRKLRPHLIKEKSATN 159
           PSRINRCLE+GAEEFFLKPVQLSDVRKLRPHLIKEKS  N
Sbjct: 121 PSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTRN 160

[Close]
BLAST of Sed0008294 vs. ExPASy TrEMBL
Match: A0A6J1JQG8 (two-component response regulator ORR4-like OS=Cucurbita maxima OX=3661 GN=LOC111486903 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.3e-66
Identity = 137/162 (84.57%), Postives = 148/162 (91.36%), Query Frame = 0 

Query: 1   MGVA----VETAQFHVLAVDDSFIDRKVIERLLKTSSYHVTAVDSGSKALEFLGLVQDRD 60
           MGVA    VET +FHVLAVDDSFIDRK+IERLLKTSSYHVTAVDSG+KALEFLGLV+D D
Sbjct: 1   MGVAVAVDVETTRFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVEDPD 60

Query: 61  RDLDLDEERESEILTSNQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSE 120
            D D+D+E+ S++  S QEVDVNLIITDYSMPGMSGY+LLRKIKESKSLKDIPVVIMSSE
Sbjct: 61  LDDDVDDEQHSKLPPSIQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSE 120

Query: 121 NVPSRINRCLEDGAEEFFLKPVQLSDVRKLRPHLIKEKSATN 159
           NVPSRINRCLE+GAEEFFLKPVQLSDVRKLRPHLIKEKS  N
Sbjct: 121 NVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTRN 162

[Close]
BLAST of Sed0008294 vs. ExPASy TrEMBL
Match: A0A6J1GPD5 (two-component response regulator ORR4-like OS=Cucurbita moschata OX=3662 GN=LOC111456248 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.3e-66
Identity = 137/162 (84.57%), Postives = 148/162 (91.36%), Query Frame = 0 

Query: 1   MGVA----VETAQFHVLAVDDSFIDRKVIERLLKTSSYHVTAVDSGSKALEFLGLVQDRD 60
           MGVA    VET +FHVLAVDDSFIDRK+IERLLKTSSYHVTAVDSG+KALEFLGLV+D D
Sbjct: 1   MGVAVAVDVETTRFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVEDPD 60

Query: 61  RDLDLDEERESEILTSNQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSE 120
            D D+D+E+ S++  S QEVDVNLIITDYSMPGMSGY+LLRKIKESKSLKDIPVVIMSSE
Sbjct: 61  LDDDVDDEQHSKLPPSIQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSE 120

Query: 121 NVPSRINRCLEDGAEEFFLKPVQLSDVRKLRPHLIKEKSATN 159
           NVPSRINRCLE+GAEEFFLKPVQLSDVRKLRPHLIKEKS  N
Sbjct: 121 NVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTRN 162

[Close]
BLAST of Sed0008294 vs. ExPASy TrEMBL
Match: A0A6J1K3C0 (two-component response regulator ORR4-like OS=Cucurbita maxima OX=3661 GN=LOC111489700 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 3.2e-65
Identity = 137/160 (85.62%), Postives = 144/160 (90.00%), Query Frame = 0 

Query: 1   MGVAVETAQFHVLAVDDSFIDRKVIERLLKTSSYHVTAVDSGSKALEFLGLVQDRDRDLD 60
           MGVAVE+ QFHVLAVDDSFIDRK+IERLLKTSSYHVT VDSG+KALEFLGL  D D D  
Sbjct: 1   MGVAVESTQFHVLAVDDSFIDRKLIERLLKTSSYHVTVVDSGNKALEFLGLDGDHDDD-- 60

Query: 61  LDEERESEILTSN--QEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENV 120
            D+E +SEI  SN  QEVDVNLIITDYSMPGMSGY+LLRKIKESKSLKDIPVVIMSSENV
Sbjct: 61  -DDEPDSEIAPSNHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENV 120

Query: 121 PSRINRCLEDGAEEFFLKPVQLSDVRKLRPHLIKEKSATN 159
           PSRINRCLE+GAEEFFLKPVQLSDVRKLRPHLIKEKS  N
Sbjct: 121 PSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTRN 157

[Close]
BLAST of Sed0008294 vs. ExPASy TrEMBL
Match: A0A5D3BEM3 (Two-component response regulator ORR10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00940 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 3.9e-63
Identity = 132/158 (83.54%), Postives = 140/158 (88.61%), Query Frame = 0 

Query: 1   MGVAVETAQFHVLAVDDSFIDRKVIERLLKTSSYHVTAVDSGSKALEFLGLVQDRDRDLD 60
           M VA+E+  FHVLAVDDSFIDRK+IERLLKTSSYHVTAVDSG+KALEFLGLVQD D+  D
Sbjct: 1   MVVALESTPFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQDHDQQTD 60

Query: 61  LDEERESEILTSNQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPS 120
                E+     +QEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPS
Sbjct: 61  SKIAPENH---HHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPS 120

Query: 121 RINRCLEDGAEEFFLKPVQLSDVRKLRPHLIKEKSATN 159
           RINRCLE+GAEEFFLKPVQLSDVRKLRPHLIKEKS  N
Sbjct: 121 RINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTNN 155

[Close]
BLAST of Sed0008294 vs. TAIR 10
Match: AT3G57040.1 (response regulator 9 )

HSP 1 Score: 196.8 bits (499), Expect = 1.3e-50
Identity = 102/154 (66.23%), Postives = 126/154 (81.82%), Query Frame = 0 

Query: 1   MGVAVETAQFHVLAVDDSFIDRKVIERLLKTSSYHVTAVDSGSKALEFLGLVQDRDRDLD 60
           MG+A E +QFHVLAVDDS  DRK+IERLL+ SS  VT VDSGSKALEFLGL Q  D +  
Sbjct: 1   MGMAAE-SQFHVLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGLRQSTDSN-- 60

Query: 61  LDEERESEILTSNQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPS 120
            D    S+   ++Q V+VNLIITDY MPGM+GY+LL+K+KES + +DIPVVIMSSENVP+
Sbjct: 61  -DPNAFSKAPVNHQVVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPA 120

Query: 121 RINRCLEDGAEEFFLKPVQLSDVRKLRPHLIKEK 155
           RI+RCLE+GAEEFFLKPV+L+D+ KL+PH++K K
Sbjct: 121 RISRCLEEGAEEFFLKPVRLADLNKLKPHMMKTK 150

[Close]
BLAST of Sed0008294 vs. TAIR 10
Match: AT2G41310.1 (response regulator 3 )

HSP 1 Score: 186.4 bits (472), Expect = 1.7e-47
Identity = 96/147 (65.31%), Postives = 118/147 (80.27%), Query Frame = 0 

Query: 8   AQFHVLAVDDSFIDRKVIERLLKTSSYHVTAVDSGSKALEFLGLVQDRDRDLDLDEERES 67
           ++FHVLAVDDS  DRK+IERLL+ SS  VT VDSGSKALEFLGL  D     D D    S
Sbjct: 7   SKFHVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVD-----DNDPNALS 66

Query: 68  EILTSNQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRINRCLE 127
                +QEV++NLIITDY MPGM+GY+LL+K+KES + + IPVVIMSSENVP+RI+RCLE
Sbjct: 67  TSPQIHQEVEINLIITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVPARISRCLE 126

Query: 128 DGAEEFFLKPVQLSDVRKLRPHLIKEK 155
           +GAEEFFLKPV+L+D+ KL+PH++K K
Sbjct: 127 EGAEEFFLKPVKLADLTKLKPHMMKTK 148

[Close]
BLAST of Sed0008294 vs. TAIR 10
Match: AT1G59940.1 (response regulator 3 )

HSP 1 Score: 164.1 bits (414), Expect = 9.3e-41
Identity = 86/149 (57.72%), Postives = 111/149 (74.50%), Query Frame = 0 

Query: 5   VETAQFHVLAVDDSFIDRKVIERLLKTSSYHVTAVDSGSKALEFLGLVQDRDRDLDLDEE 64
           +++ Q HVLAVDDS +DR VIERLL+ +S  VTAVDSG +ALEFLGL  D+         
Sbjct: 28  LDSDQVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDDK--------- 87

Query: 65  RESEILTSNQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRINR 124
                      + V+LIITDY MPGM+GYELL+KIKES S K++PVVIMSSENV +RI+R
Sbjct: 88  ----AAVEFDRLKVDLIITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDR 147

Query: 125 CLEDGAEEFFLKPVQLSDVRKLRPHLIKE 154
           CLE+GAE+F LKPV+L+DV++LR +L ++
Sbjct: 148 CLEEGAEDFLLKPVKLADVKRLRSYLTRD 163

[Close]
BLAST of Sed0008294 vs. TAIR 10
Match: AT1G10470.1 (response regulator 4 )

HSP 1 Score: 164.1 bits (414), Expect = 9.3e-41
Identity = 87/150 (58.00%), Postives = 112/150 (74.67%), Query Frame = 0 

Query: 9   QFHVLAVDDSFIDRKVIERLLKTSSYHVTAVDSGSKALEFLGLVQDRDRDLDLDEERESE 68
           + HVLAVDDS +DR VIERLL+ +S  VTAVDSG +ALEFLG          LD E+ S 
Sbjct: 33  EVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLG----------LDNEKAS- 92

Query: 69  ILTSNQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRINRCLED 128
                  + V+LIITDY MPGM+GYELL+KIKES + +++PVVIMSSENV +RI+RCLE+
Sbjct: 93  --AEFDRLKVDLIITDYCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEE 152

Query: 129 GAEEFFLKPVQLSDVRKLRPHLIKEKSATN 159
           GA++F LKPV+L+DV++LR HL K+   +N
Sbjct: 153 GAQDFLLKPVKLADVKRLRSHLTKDVKLSN 169

[Close]
BLAST of Sed0008294 vs. TAIR 10
Match: AT3G48100.1 (response regulator 5 )

HSP 1 Score: 160.6 bits (405), Expect = 1.0e-39
Identity = 83/142 (58.45%), Postives = 109/142 (76.76%), Query Frame = 0 

Query: 11  HVLAVDDSFIDRKVIERLLKTSSYHVTAVDSGSKALEFLGLVQDRDRDLDLDEERESEIL 70
           HVLAVDDS +DRK IERLL+ SS  VT VDS ++AL++LG          LD E  S + 
Sbjct: 26  HVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLG----------LDGENNSSV- 85

Query: 71  TSNQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRINRCLEDGA 130
              +++ +NLI+TDYSMPGM+GYELL+KIKES + ++IPVVIMSSEN+  RI+RCLE+GA
Sbjct: 86  -GFEDLKINLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGA 145

Query: 131 EEFFLKPVQLSDVRKLRPHLIK 153
           E+F LKPV+L+DV++LR  L+K
Sbjct: 146 EDFLLKPVKLADVKRLRDSLMK 155

The following BLAST results are available for this feature:
BLAST of Sed0008294 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022938947.14.1e-6786.88two-component response regulator ORR4-like [Cucurbita moschata][more]
KAG7032635.11.6e-6686.71Two-component response regulator ARR9 [Cucurbita argyrosperma subsp. argyrosperm... [more]
XP_022953837.12.7e-6684.57two-component response regulator ORR4-like [Cucurbita moschata] >XP_022989834.1 ... [more]
XP_022993798.16.6e-6585.63two-component response regulator ORR4-like [Cucurbita maxima][more]
XP_023550008.11.1e-6485.00two-component response regulator ORR4-like [Cucurbita pepo subsp. pepo][more]
BLAST of Sed0008294 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
B8BLZ44.8e-5066.88Two-component response regulator ORR10 OS=Oryza sativa subsp. indica OX=39946 GN... [more]
Q2QXY34.8e-5066.88Two-component response regulator ORR10 OS=Oryza sativa subsp. japonica OX=39947 ... [more]
Q4GZK26.2e-5066.88Two-component response regulator ORR9 OS=Oryza sativa subsp. indica OX=39946 GN=... [more]
Q2RAP36.2e-5066.88Two-component response regulator ORR9 OS=Oryza sativa subsp. japonica OX=39947 G... [more]
O803661.8e-4966.23Two-component response regulator ARR9 OS=Arabidopsis thaliana OX=3702 GN=ARR9 PE... [more]
BLAST of Sed0008294 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FFG92.0e-6786.88two-component response regulator ORR4-like OS=Cucurbita moschata OX=3662 GN=LOC1... [more]
A0A6J1JQG81.3e-6684.57two-component response regulator ORR4-like OS=Cucurbita maxima OX=3661 GN=LOC111... [more]
A0A6J1GPD51.3e-6684.57two-component response regulator ORR4-like OS=Cucurbita moschata OX=3662 GN=LOC1... [more]
A0A6J1K3C03.2e-6585.63two-component response regulator ORR4-like OS=Cucurbita maxima OX=3661 GN=LOC111... [more]
A0A5D3BEM33.9e-6383.54Two-component response regulator ORR10-like OS=Cucumis melo var. makuwa OX=11946... [more]
BLAST of Sed0008294 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G57040.11.3e-5066.23response regulator 9 [more]
AT2G41310.11.7e-4765.31response regulator 3 [more]
AT1G59940.19.3e-4157.72response regulator 3 [more]
AT1G10470.19.3e-4158.00response regulator 4 [more]
AT3G48100.11.0e-3958.45response regulator 5 [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001789Signal transduction response regulator, receiver domainSMARTSM00448REC_2coord: 10..147
e-value: 1.3E-18
score: 77.8
IPR001789Signal transduction response regulator, receiver domainPFAMPF00072Response_regcoord: 12..145
e-value: 7.9E-20
score: 71.1
IPR001789Signal transduction response regulator, receiver domainPROSITEPS50110RESPONSE_REGULATORYcoord: 11..151
score: 34.005058
NoneNo IPR availableGENE3D3.40.50.2300coord: 11..157
e-value: 3.5E-32
score: 114.3
NoneNo IPR availablePANTHERPTHR43874:SF140RESPONSE REGULATOR ARR8, PUTATIVE-RELATEDcoord: 3..156
NoneNo IPR availablePANTHERPTHR43874TWO-COMPONENT RESPONSE REGULATORcoord: 3..156
NoneNo IPR availableCDDcd17581REC_typeA_ARRcoord: 12..146
e-value: 3.31002E-72
score: 210.685
IPR011006CheY-like superfamilySUPERFAMILY52172CheY-likecoord: 10..147

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0008294.1Sed0008294.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009073 aromatic amino acid family biosynthetic process
biological_process GO:0008652 cellular amino acid biosynthetic process
biological_process GO:0009423 chorismate biosynthetic process
biological_process GO:0000160 phosphorelay signal transduction system
biological_process GO:0016310 phosphorylation
cellular_component GO:0009507 chloroplast
molecular_function GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity
molecular_function GO:0016301 kinase activity