Sed0006370 (gene) Chayote v1

Overview


Name	Sed0006370
Type	gene
Organism	Sechium edule (Chayote v1)
Description	EAF domain-containing protein
Location	LG03: 6982284 .. 6986406 (+)
RNA-Seq Expression	Sed0006370
Synteny	Sed0006370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTGTTATTTTTGTAGTGGAGTTCGATTCGATCCGGCCCTTAGCGTTGTGAAGCGCAATGGCTAACAGCAACAAAGAAGAGCCGAAGAGCGCACCTGAGGCCGATCACTGGTACAAGCTATCTCTCGGCCCGTCCTTCAACCCCGAATCCTCCAACAAATTCTGCACTCTCCGATGTAAGTCTTTCCGATTCACCCCAAAACCCTCGATCTCAGTAATCCGTTTTTGCTTATTTTCTTCCCTCCAATCGTTTGATCTCGTTTTGCGCATTATTGCGGTTTCAGATGAGTTCAAGCCGGCGTCGATCGACAAGACCAAGCCGGGATCCCTGAAGAAGACCAAGGAAAATAGGGTTACGGTTGAATTTCAGAACAACCAATTGGGGAAACCTAATGTCGCGTTTGTCGGCAGCAGTGAGGATTATAAGGATAATGATGCTGTCTTGTTTTTTGACGGCGAGACCTTCCGGTTGGAGCGCCTCCACCGGGCGGTCAAGCAGCTCCGCCACCTTCGACAACCTGGGGAATCCGCTGCCACCGCCGCCGGTGCCGGTCCCTCCACCACCGCTTCTCTTCCTCAGTCTTTGACGGTGCCGGAGCCGAGGTTGTCTCCTCCGCCGCCTAAAGTGGCCAAACCTATGCATATGGGTCGAAACAGTTTCCCGATTGTGCCGGTGAGGGCTGCTTGTCATTTATTATATATTACATAATCTTAGATTGAATATAGAAAATAAAAAACGTTTGAGTTTTTGGTACTTTAACGCTGTGCTATCTTTCTAGTTTCTGTAATGCAGGATTCTCGTATGAATTGTTGTTCTAGTCTTAATAAATGAGGAGCTAAGATTAGGGAAAAATTGGATTGTTAAGGTCAATGTTTGATGATCATTTAAGCTTATTTCTATTCAAATTTCTTATCATTACCAAATTTCAAAAAACAAAACAAGTTTTTGGAAGCTATTTTTTTTTTGTTTCCAAATTTTGGTTTGATTTTTAAAAACAAAAATAAATATAGGGTCAAGTAAGAACAAATAAGAACAAATAGATGGTTTGTTGACTTCAATTTCAAAAATAAAAATAAAATAGTTATCAAATGGGGCCTAACAATTTCGTTTTGAAGAAAGAAGATTAACTTTATACAGGGGGTTAAAATTTTGTGTCCTTTCAAATGCCAGCTAAATTTTCATTGAACTTTCTTTTCTCTTCTCTCTTCATTGTTCTAACACATTCTGCATTTATGACCGTACTTGAACAGGTTGTGTTCTATATGTTGTGCAATTGTGTGTATGAGTTCTAATACCGATGCATTCTTCATTTACAGGTAGAGGTGGAAAGAATAGATATTGGAGATCCAGGAAATACAGGTCAATATATATTTCTGGTTCTATAATAATTTTTCTGGATTTATAGGTACTTTTGTGGTAATGAGTTGCCTGCCCCTGTCCATGGTATTTGCTTATTTTGAAAAGATTTTATTGCAAACTGATGAGACCCAATTTCTATTACCATGTGAAAGGAACCAAAATACCAGATAAGCCTAGGTGAGAGGAACCAAAATACCAGATAAGCCTAGGTGAAAGGCACCAAGAACCTCCCTATCTAGAGAATCCTCTCTTTAGCCCAAATGAAACCACTCAATATTTTGCTTACTTTACCCCCTATCTCTATTTATAACAGAAAGTGCTAACAAACTCTCAACTAATTGCCCTCGTACCCCTAAAATATACCTAATTACAATCCTATCACAAACCCTACCTATGTCTTTTAAATTGGGACCCTTACTTACCTACTATACCCATTGCGGTTGTTTTCTGCCTTGTTGGTGTCTTAGTTTATAGCACAAAGTTTTGTTTAATGAGTAACCAAGCTTGAAAAAAAAACTTCATTTTCTCAATGAAAGATTGGTTCCGTGTTAAAAAAAAAAAACCAAGCTTGAGAAAAATGAAAGAAACAAACGGCAATGCAAGAATAATGAAAGAAAAAGCTCGTGAGAAAAATGGACCCGTTGGCCACAAAAAGTTATTAAAAGTGCTTCAATTGTTGAGAATATGAGAGGAAGAATTGTCCCGAAGGGAACCGTGGTTGAAGACTTGGGCTTTGAAGGTATGCCTCCTCAAGGTCCCATGTTCGAGACTCACCCGTGACATTATTCCTGCAATGTCTTCCGGTGCCTGGCTTAGGGACGGATGTGGTTACCCTTGTTTAAAAAAAATAAATATGAGAGGAAAAATAATGTCAAAAAAACCTGTTCGAAGATCCAAGGAGAGTAGTGATACAGTTAGTCTATACTTGTGCGGGTGCAAATTTATGACTCAAGGGCGACCTTAAGTTTGTAAGTGAGCTATGTTAGTATGTGGCAACTTTTTTCTTTATCTCTAACCTTATTTGGGAGGTTACCTTTTTCCCAATCTCAAGATGATCACTGCTTATGAAGTCTAGACTTAATTTTGTCTGCAATATTCAGTTCTTACAGGTCTGTTGCATCATTCCTAACAGGTAAATTTAACTTAGAAATGCATTTAGTTGATGATTTGTTGTTTGAATAGTTGAAGCGTGCTTAAGGCTAATCGGACACTCACGTCTATATATATATAGGGTTTAGGGTTATATAAATTTTGAAGTATCGTGTAAATATATTTTCTTCTAGTTTCTAGATTCTTGTTTAATTTTTATGGGCAAGACTTGATAATGTAGCTTAATATATCGAACAACCTGTTGTACCCGGGTGTCAAGGCCAAACAAGATTTATCTTTAATAGAATTTAATCATTTATTTCTTCAACGTGTTTGGTAGATGTTGATTTCCGGTTTAATGTGTAAGAACGCCGTTCCTCCCAGAAATAGTACACCTTTTTTGGAATTTCAGACTTACTCGTTAGTTCTATTTATCACTCTACAAGTGAGAATGAGATGTTTTCCAATTGATGTTAAACAAACTTGAAAATGCCTTAAAAATGAATTATAGATCTTTTAGCGACTGGTTTGCATAGTTTTATTTTTTCCTTTCTACTAGACAGTTATTTAAGTAGTTAAATGCACATCTAGTGTGCCTTTTTTGTTGTAATTAGAGGGGCCAAAGGCCCAAAGAGACGTCTGTGTTTGTTCCATCAGCAGCAACTTTATCCGTTATTAAAGGGTTCATTTGTGTATGGTTGCTGGCTGTTTAATCACATATTTCACTCACTATTGTTTTCCGACCTAAATTTAGTTGGCTAATAACAACAAAGTCTTTATCCTCGCTCAGAATAATGTTCTTGCTTAGTTAGCTTAATAATTTGTCTTTTGTTCAAACTTTTTAAAGACTGCTTTTTTTTTTCTTTTTTTTTTCTTTTTTTTTATATTGATCTTTGAACTTGATCAAGTGAACGGGGGATGACTGTTTTACTTATTTTCTTTATTACCTCTTATCCAAAATATGTTTATGCTCATGACAGGTCCGAAATCTGTTACTTCTAGTAAAGGGATTGCTGATTACTCATCAGATACACCAGTTGTCCCTGCTCCCTCTCCGGGCCCAAAGAATGAGGATGAACATATAGATATAGATATTGTTGACATTTTCGGGTCTGTTTCATCGGATGATGATGGAAATAATGTCGAGGAAGAAAAGGTTGAAATTGGATTTGATATAAACAACGTACCACATCAGAATGATACCGATGATGAAATCGCTGATGTGGATGATAGTGGTGACGAGGCTGAGAAGGGACCGAATGCTGCAGAAGCCCTCAGGGCTCAGGTTGATGCAGAGGGCAGGAACGGCCGGACTTCGAGTTCTAGTACCAGCAAGTCGGGCAGTGGTAGCAGCAGCAGAAGTAGCAGTGGCAGCAGCGACAGCGAAGGTAGCGATGAGGATTCCATTTCTTCAATCTGATTGAAATGAAGCCGATGAGTTTTTTGAGCCTTGAGAATCTATCTTAAGACGATTGAAGTATGCAAAAACTTGCTCGACCATTGCCTTGTGATTCATACTTCATTTTTTATTGGTAGTTTGTTTTATTTATGCTATGGAAAAACTCTTAGAATAATGTTATTGTAAAATAAATTTTCAAATATAGTGATTTTGGTCTATGTGGTCTATTTTACCAGATTCATATTAAATTTCATTTTTAATCCTTATTTCAA

mRNA sequence

ATGGAGTGTTATTTTTGTAGTGGAGTTCGATTCGATCCGGCCCTTAGCGTTGTGAAGCGCAATGGCTAACAGCAACAAAGAAGAGCCGAAGAGCGCACCTGAGGCCGATCACTGGTACAAGCTATCTCTCGGCCCGTCCTTCAACCCCGAATCCTCCAACAAATTCTGCACTCTCCGATATGAGTTCAAGCCGGCGTCGATCGACAAGACCAAGCCGGGATCCCTGAAGAAGACCAAGGAAAATAGGGTTACGGTTGAATTTCAGAACAACCAATTGGGGAAACCTAATGTCGCGTTTGTCGGCAGCAGTGAGGATTATAAGGATAATGATGCTGTCTTGTTTTTTGACGGCGAGACCTTCCGGTTGGAGCGCCTCCACCGGGCGGTCAAGCAGCTCCGCCACCTTCGACAACCTGGGGAATCCGCTGCCACCGCCGCCGGTGCCGGTCCCTCCACCACCGCTTCTCTTCCTCAGTCTTTGACGGTGCCGGAGCCGAGGTTGTCTCCTCCGCCGCCTAAAGTGGCCAAACCTATGCATATGGGTCGAAACAGTTTCCCGATTGTGCCGGTAGAGGTGGAAAGAATAGATATTGGAGATCCAGGAAATACAGGTCCGAAATCTGTTACTTCTAGTAAAGGGATTGCTGATTACTCATCAGATACACCAGTTGTCCCTGCTCCCTCTCCGGGCCCAAAGAATGAGGATGAACATATAGATATAGATATTGTTGACATTTTCGGGTCTGTTTCATCGGATGATGATGGAAATAATGTCGAGGAAGAAAAGGTTGAAATTGGATTTGATATAAACAACGTACCACATCAGAATGATACCGATGATGAAATCGCTGATGTGGATGATAGTGGTGACGAGGCTGAGAAGGGACCGAATGCTGCAGAAGCCCTCAGGGCTCAGGTTGATGCAGAGGGCAGGAACGGCCGGACTTCGAGTTCTAGTACCAGCAAGTCGGGCAGTGGTAGCAGCAGCAGAAGTAGCAGTGGCAGCAGCGACAGCGAAGGTAGCGATGAGGATTCCATTTCTTCAATCTGATTGAAATGAAGCCGATGAGTTTTTTGAGCCTTGAGAATCTATCTTAAGACGATTGAAGTATGCAAAAACTTGCTCGACCATTGCCTTGTGATTCATACTTCATTTTTTATTGGTAGTTTGTTTTATTTATGCTATGGAAAAACTCTTAGAATAATGTTATTGTAAAATAAATTTTCAAATATAGTGATTTTGGTCTATGTGGTCTATTTTACCAGATTCATATTAAATTTCATTTTTAATCCTTATTTCAA

Coding sequence (CDS)

ATGGCTAACAGCAACAAAGAAGAGCCGAAGAGCGCACCTGAGGCCGATCACTGGTACAAGCTATCTCTCGGCCCGTCCTTCAACCCCGAATCCTCCAACAAATTCTGCACTCTCCGATATGAGTTCAAGCCGGCGTCGATCGACAAGACCAAGCCGGGATCCCTGAAGAAGACCAAGGAAAATAGGGTTACGGTTGAATTTCAGAACAACCAATTGGGGAAACCTAATGTCGCGTTTGTCGGCAGCAGTGAGGATTATAAGGATAATGATGCTGTCTTGTTTTTTGACGGCGAGACCTTCCGGTTGGAGCGCCTCCACCGGGCGGTCAAGCAGCTCCGCCACCTTCGACAACCTGGGGAATCCGCTGCCACCGCCGCCGGTGCCGGTCCCTCCACCACCGCTTCTCTTCCTCAGTCTTTGACGGTGCCGGAGCCGAGGTTGTCTCCTCCGCCGCCTAAAGTGGCCAAACCTATGCATATGGGTCGAAACAGTTTCCCGATTGTGCCGGTAGAGGTGGAAAGAATAGATATTGGAGATCCAGGAAATACAGGTCCGAAATCTGTTACTTCTAGTAAAGGGATTGCTGATTACTCATCAGATACACCAGTTGTCCCTGCTCCCTCTCCGGGCCCAAAGAATGAGGATGAACATATAGATATAGATATTGTTGACATTTTCGGGTCTGTTTCATCGGATGATGATGGAAATAATGTCGAGGAAGAAAAGGTTGAAATTGGATTTGATATAAACAACGTACCACATCAGAATGATACCGATGATGAAATCGCTGATGTGGATGATAGTGGTGACGAGGCTGAGAAGGGACCGAATGCTGCAGAAGCCCTCAGGGCTCAGGTTGATGCAGAGGGCAGGAACGGCCGGACTTCGAGTTCTAGTACCAGCAAGTCGGGCAGTGGTAGCAGCAGCAGAAGTAGCAGTGGCAGCAGCGACAGCGAAGGTAGCGATGAGGATTCCATTTCTTCAATCTGA

Protein sequence

MANSNKEEPKSAPEADHWYKLSLGPSFNPESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKDNDAVLFFDGETFRLERLHRAVKQLRHLRQPGESAATAAGAGPSTTASLPQSLTVPEPRLSPPPPKVAKPMHMGRNSFPIVPVEVERIDIGDPGNTGPKSVTSSKGIADYSSDTPVVPAPSPGPKNEDEHIDIDIVDIFGSVSSDDDGNNVEEEKVEIGFDINNVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVDAEGRNGRTSSSSTSKSGSGSSSRSSSGSSDSEGSDEDSISSI

Homology

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BLAST of Sed0006370 vs. NCBI nr
Match: XP_022993461.1 (ELL-associated factor 1 [Cucurbita maxima] >XP_023551438.1 ELL-associated factor 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 481.1 bits (1237), Expect = 7.6e-132
Identity = 273/347 (78.67%), Postives = 293/347 (84.44%), Query Frame = 0


Query: 1   MANSNKEEPKSAPEADHWYKLSLGPSFNPESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60
           MAN+NKEEPK+AP+ D WY LSLGPSFN ESSNKFCTLRYEFKPASIDKTKPGSLKKTKE
Sbjct: 1   MANNNKEEPKTAPQPDRWYDLSLGPSFNNESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60

Query: 61  NRVTVEFQNNQLGKPNVAFVGSSEDYKDNDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
           NRVT+EFQNNQLGKPNVAFVGSSEDYK+NDAVLFFDGETFRLERLHRAVKQLRHLRQPGE
Sbjct: 61  NRVTIEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120

Query: 121 SAATAAGAGPSTTASLPQSLTVPEPRLSPPPPKVAKPMHMGRNSFPIVPVEVERIDIGDP 180
           S+A    A  ST+AS   SLT PEPRLSPP  KV KPMHMGR SFP V VEVE+IDIG+P
Sbjct: 121 SSAAGVAAASSTSASALHSLTPPEPRLSPPAAKVPKPMHMGRGSFPSVLVEVEKIDIGEP 180

Query: 181 GNTGPKSVTSSKGIADYSSDTPVVPAPSPGPKNEDEHIDIDIVDIFGSVSSDDDGNNVEE 240
           GNTG KSV +SKG ADYSSD P V APSPGPKN+DEH DIDI DIFGSVSSDD+ NN EE
Sbjct: 181 GNTGAKSVVASKGPADYSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDE-NNAEE 240

Query: 241 EKVEIGFDINNVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVDAEGRNGRT----- 300
           +KV+ GFDI NVPH NDTDDEIADVDDSGDEAEKGPNAAEALRAQV+AEGR G T     
Sbjct: 241 DKVDAGFDI-NVPHHNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAAL 300

Query: 301 -------------SSSSTSKSGSGSSSRSSSGSSDSEGSDEDSISSI 330
                        SSSS+S+SGSGSSS SSSGSSDSEG+DEDS++SI
Sbjct: 301 RAQVNAEGRDEQSSSSSSSESGSGSSSGSSSGSSDSEGTDEDSVTSI 345

[Close]

BLAST of Sed0006370 vs. NCBI nr
Match: XP_022939831.1 (ELL-associated factor 1 [Cucurbita moschata] >KAG7016756.1 Ell-associated factor Eaf [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 480.7 bits (1236), Expect = 1.0e-131
Identity = 273/347 (78.67%), Postives = 293/347 (84.44%), Query Frame = 0


Query: 1   MANSNKEEPKSAPEADHWYKLSLGPSFNPESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60
           MAN+NKEEPK+AP+ D WY LSLGPSFN ESSNKFCTLRYEFKPASIDKTKPGSLKKTKE
Sbjct: 1   MANNNKEEPKTAPQPDRWYDLSLGPSFNNESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60

Query: 61  NRVTVEFQNNQLGKPNVAFVGSSEDYKDNDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
           NRVT+EFQNNQLGKPNVAFVGSSEDYK+NDAVLFFDGETFRLERLHRAVKQLRHLRQPGE
Sbjct: 61  NRVTIEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120

Query: 121 SAATAAGAGPSTTASLPQSLTVPEPRLSPPPPKVAKPMHMGRNSFPIVPVEVERIDIGDP 180
           S+A A  A  ST+AS   SLT PEPRLSPP  KV KPMHMGR SFP V VEVE+IDIG+P
Sbjct: 121 SSAAAVAAASSTSASALHSLTPPEPRLSPPAAKVPKPMHMGRGSFPSVLVEVEKIDIGEP 180

Query: 181 GNTGPKSVTSSKGIADYSSDTPVVPAPSPGPKNEDEHIDIDIVDIFGSVSSDDDGNNVEE 240
           GNTG K V +SKG ADYSSD P V APSPGPKN+DEH DIDI DIFGSVSSDD+ NN EE
Sbjct: 181 GNTGAKPVVASKGPADYSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDE-NNAEE 240

Query: 241 EKVEIGFDINNVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVDAEGRNGRT----- 300
           +KV+ GFDI NVPH NDTDDEIADVDDSGDEAEKGPNAAEALRAQV+AEGR G T     
Sbjct: 241 DKVDAGFDI-NVPHHNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAAL 300

Query: 301 -------------SSSSTSKSGSGSSSRSSSGSSDSEGSDEDSISSI 330
                        SSSS+S+SGSGSSS SSSGSSDSEG+DEDS++SI
Sbjct: 301 RAQVNAEGRDEQSSSSSSSESGSGSSSGSSSGSSDSEGTDEDSVTSI 345

[Close]

BLAST of Sed0006370 vs. NCBI nr
Match: KAG6579241.1 (Ell-associated factor Eaf, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 479.2 bits (1232), Expect = 2.9e-131
Identity = 272/347 (78.39%), Postives = 292/347 (84.15%), Query Frame = 0


Query: 1   MANSNKEEPKSAPEADHWYKLSLGPSFNPESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60
           MAN+NKEEPK+AP+ D WY LSLGPSFN ESSNKFCTLRYEFKPASIDKTKPGSLKKTKE
Sbjct: 1   MANNNKEEPKTAPQPDRWYDLSLGPSFNNESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60

Query: 61  NRVTVEFQNNQLGKPNVAFVGSSEDYKDNDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
           NRVT+EFQNNQLGKPNVAFVGSSEDYK+NDAVLFFDGETFRLERLHRAVKQLRHLRQPGE
Sbjct: 61  NRVTIEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120

Query: 121 SAATAAGAGPSTTASLPQSLTVPEPRLSPPPPKVAKPMHMGRNSFPIVPVEVERIDIGDP 180
           S+A A     ST+AS   SLT PEPRLSPP  KV KPMHMGR SFP V VEVE+IDIG+P
Sbjct: 121 SSAAAVAVASSTSASAIHSLTPPEPRLSPPAAKVPKPMHMGRGSFPSVLVEVEKIDIGEP 180

Query: 181 GNTGPKSVTSSKGIADYSSDTPVVPAPSPGPKNEDEHIDIDIVDIFGSVSSDDDGNNVEE 240
           GNTG K V +SKG ADYSSD P V APSPGPKN+DEH DIDI DIFGSVSSDD+ NN EE
Sbjct: 181 GNTGAKPVVASKGPADYSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDE-NNAEE 240

Query: 241 EKVEIGFDINNVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVDAEGRNGRT----- 300
           +KV+ GFDI NVPH NDTDDEIADVDDSGDEAEKGPNAAEALRAQV+AEGR G T     
Sbjct: 241 DKVDAGFDI-NVPHHNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAAL 300

Query: 301 -------------SSSSTSKSGSGSSSRSSSGSSDSEGSDEDSISSI 330
                        SSSS+S+SGSGSSS SSSGSSDSEG+DEDS++SI
Sbjct: 301 RAQVNAEGRDEQSSSSSSSESGSGSSSGSSSGSSDSEGTDEDSVTSI 345

[Close]

BLAST of Sed0006370 vs. NCBI nr
Match: XP_038893321.1 (ELL-associated factor 2-like [Benincasa hispida])

HSP 1 Score: 478.8 bits (1231), Expect = 3.8e-131
Identity = 277/360 (76.94%), Postives = 294/360 (81.67%), Query Frame = 0


Query: 1   MANSNKEEPKSAPEADHWYKLSLGPSFNPESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60
           MAN+NKEEPK+AP+ D WY LSLGPSF  ESSNKFCTLRYEFKPASIDKTKPGSLKKTKE
Sbjct: 1   MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60

Query: 61  NRVTVEFQNNQLGKPNVAFVGSSEDYKDNDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
           NRVTVEFQNNQ GKPNVAFVGSSEDYK+NDAVLFFDGETFRLERLHRAVKQLRHLRQPGE
Sbjct: 61  NRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120

Query: 121 SAATAAGAGPSTT-------------ASLPQSLTVPEPRLSPPPPKVAKPMHMGRNSFPI 180
           SAA AA A P+TT             AS   SLT PEPRLSPP  KVAKPMHMGR SFP 
Sbjct: 121 SAAAAAAAPPTTTGVAAPATTSTSGVASALHSLTPPEPRLSPPVAKVAKPMHMGRGSFPT 180

Query: 181 VPVEVERIDIGDPGNTGPKSVTSSKGIADYSSDTPVVPAPSPGPKNEDEHIDIDIVDIFG 240
           +PVEVERIDIG+PGNTG KSV +SKG+ADYSSD P V A SPG KN+DEH DIDI D+FG
Sbjct: 181 MPVEVERIDIGEPGNTGAKSVVASKGLADYSSDPPNVSASSPGLKNDDEHQDIDIDDLFG 240

Query: 241 SVSSDDDGNNVEEEKVEIGFDINNVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVD 300
           SV S DDGNN EEE+VE GFDI N+PHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQV+
Sbjct: 241 SVLS-DDGNNAEEERVETGFDI-NIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVN 300

Query: 301 AEGRNGRT------------------SSSSTSKSGSGSSSRSSSGSSDSEGSDEDSISSI 330
           AEGR G T                  SSSS+S SGSGSSS SSSGSSDSEGSDEDS++SI
Sbjct: 301 AEGREGPTAAAALRAQVDAEGRDDQSSSSSSSGSGSGSSSGSSSGSSDSEGSDEDSVTSI 358

[Close]

BLAST of Sed0006370 vs. NCBI nr
Match: XP_022151706.1 (ELL-associated factor 1 [Momordica charantia] >XP_022151707.1 ELL-associated factor 1 [Momordica charantia] >XP_022151708.1 ELL-associated factor 1 [Momordica charantia] >XP_022151709.1 ELL-associated factor 1 [Momordica charantia])

HSP 1 Score: 467.2 bits (1201), Expect = 1.1e-127
Identity = 261/331 (78.85%), Postives = 290/331 (87.61%), Query Frame = 0


Query: 1   MANSNKEEPKSAPEADHWYKLSLGPSFNPESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60
           MAN NKEEPK+AP+++ WY LSLGPSF  ESSNKFCTLRYEFKPASIDKTKPGSLKKTK+
Sbjct: 1   MANDNKEEPKTAPQSERWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKD 60

Query: 61  NRVTVEFQNNQLGKPNVAFVGSSEDYKDNDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
           NRVTVEFQNNQLG+PNVAFVGSSED K+NDAVLFFDGETFRLERLHRAV  LRH+RQ  E
Sbjct: 61  NRVTVEFQNNQLGRPNVAFVGSSEDCKENDAVLFFDGETFRLERLHRAVTHLRHVRQADE 120

Query: 121 SAATAAGAGPSTTASLPQSLTVPEPRLSPPPPKVAKPMHMGRNSFPIVPVEVERIDIGDP 180
           SA T      S T S+P SLTVPEPRLSPP  KV KPMHMGR+SFP+VPVEVERIDIG+P
Sbjct: 121 SATT------SITTSVPHSLTVPEPRLSPPVAKVTKPMHMGRSSFPVVPVEVERIDIGEP 180

Query: 181 GNTGPKSVTSSKGIADYSSDTPVV--PAPSPGPKNEDEHIDIDIVDIFGSVSSDDDGNNV 240
           GNTG  SV +SK +ADY+SD P V  P+PSPG  N+DEH DIDI +IFGSVSS DDGNNV
Sbjct: 181 GNTGASSVAASKEVADYTSDPPNVSAPSPSPGMDNDDEHQDIDIDEIFGSVSS-DDGNNV 240

Query: 241 EEEKVEIGFDINNVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVDAEGRNGRTSSS 300
           EEEK+++GFDI NVPH NDTDDEIADVDDSGDEA+KGPNAAEALRAQV+AEGR+ +TSSS
Sbjct: 241 EEEKIDVGFDI-NVPHHNDTDDEIADVDDSGDEAQKGPNAAEALRAQVNAEGRDKQTSSS 300

Query: 301 STSKSGSGSSSRSSSGSSDSEGSDEDSISSI 330
           S+S+SGSGSSS SSSGSSDSE SDEDS++SI
Sbjct: 301 SSSESGSGSSSGSSSGSSDSEHSDEDSVTSI 323

[Close]

BLAST of Sed0006370 vs. ExPASy Swiss-Prot
Match: B3NA01 (Ell-associated factor Eaf OS=Drosophila erecta OX=7220 GN=Eaf PE=3 SV=2)

HSP 1 Score: 57.0 bits (136), Expect = 4.7e-07
Identity = 42/140 (30.00%), Postives = 77/140 (55.00%), Query Frame = 0


Query: 20  KLSLGPSFNPE-SSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQ-LGKPNV 79
           +L LG +FNP+ +S  F T++Y+FKPAS+D ++  S+     N+VTV   N++  G P+ 
Sbjct: 22  ELKLGATFNPKNTSTAFHTIKYDFKPASVDTSRMASVDVGSNNQVTVTVPNSESSGVPHT 81

Query: 80  AFVGSSEDYKDNDAVLFFDGET--FRLERLHR--AVKQLRH------LRQPGESAATAAG 139
            + G+  +Y   + ++ +D ET    +E+L+    VK+ R+      ++ PG++A+   G
Sbjct: 82  VYKGNQREYA-KECLMIYDKETGAITIEKLNHNIQVKKTRNEVANKSVQLPGQNASVNMG 141

Query: 140 AG----PSTTASLPQSLTVP 144
            G         S+P  ++ P
Sbjct: 142 QGQLHSQGANGSVPGPISAP 160

[Close]

BLAST of Sed0006370 vs. ExPASy Swiss-Prot
Match: B4P1N5 (Ell-associated factor Eaf OS=Drosophila yakuba OX=7245 GN=Eaf PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 6.1e-07
Identity = 39/122 (31.97%), Postives = 69/122 (56.56%), Query Frame = 0


Query: 20  KLSLGPSFNPE-SSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQ-LGKPNV 79
           +L LG +FNP+ +S  F T++Y+FKPAS+D ++  S+     N+VTV   N++  G P+ 
Sbjct: 22  ELKLGATFNPKNTSTAFHTIKYDFKPASVDTSRMASVDVGSNNQVTVTVPNSESSGVPHT 81

Query: 80  AFVGSSEDYKDNDAVLFFDGET--FRLERLHR--AVKQLR------HLRQPGESAATAAG 130
            + G+  +Y   + ++ +D ET    +E+L+    VK+ R       ++ PG+ A+   G
Sbjct: 82  VYKGNQREYA-KECLMIYDKETGAITIEKLNHNIQVKKTRSEVTSKSVQLPGQHASVNMG 141

[Close]

BLAST of Sed0006370 vs. ExPASy Swiss-Prot
Match: B4HQT6 (Ell-associated factor Eaf OS=Drosophila sechellia OX=7238 GN=Eaf PE=3 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 8.0e-07
Identity = 42/134 (31.34%), Postives = 75/134 (55.97%), Query Frame = 0


Query: 20  KLSLGPSFNPE-SSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQ-LGKPNV 79
           +L LG +FNP+ +S  F T++Y+FKPAS+D ++  S+     N+VTV   N++  G P+ 
Sbjct: 22  ELKLGATFNPKNTSTAFHTIKYDFKPASVDTSRMASVDVGSNNQVTVTVPNSESSGVPHT 81

Query: 80  AFVGSSEDYKDNDAVLFFDGET--FRLERLHR--AVKQLRH------LRQPGESAAT--- 135
            + G+  +Y   + ++ +D ET    +E+L+    VK+ R+      ++ PG++      
Sbjct: 82  VYKGNQREYA-KECLMIYDKETGAITIEKLNHNIQVKKTRNEVSNKSVQLPGQNMGQGQP 141

[Close]

BLAST of Sed0006370 vs. ExPASy Swiss-Prot
Match: B4LMA2 (Ell-associated factor Eaf OS=Drosophila virilis OX=7244 GN=Eaf PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.8e-06
Identity = 44/130 (33.85%), Postives = 67/130 (51.54%), Query Frame = 0


Query: 16  DHWYKLSLGPSFNPE-SSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQN-NQLG 75
           D   +L LG +FNP+ +S  F T++Y+FKPAS+D ++  ++     N+VTV   N    G
Sbjct: 19  DEVRELKLGATFNPKNTSTAFHTIKYDFKPASVDTSRMATVDVGSNNQVTVTVPNLESSG 78

Query: 76  KPNVAFVGSSEDYKDNDAVLFFDGET--FRLERLHR--AVKQLRHLRQPGESAATAAGAG 135
            P   + G+ + Y   + ++ FD ET    LERL+    VK+ R       S  +A  A 
Sbjct: 79  VPQTVYKGNHKKY-TKECLIIFDKETGAITLERLNHNIQVKKTRSEVTNKPSLMSATNAP 138

Query: 136 PSTTASLPQS 140
            S  A +P S
Sbjct: 139 MSNGAPVPSS 147

[Close]

BLAST of Sed0006370 vs. ExPASy Swiss-Prot
Match: Q7JRJ1 (Ell-associated factor Eaf OS=Drosophila melanogaster OX=7227 GN=Eaf PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 6.7e-06
Identity = 41/136 (30.15%), Postives = 75/136 (55.15%), Query Frame = 0


Query: 20  KLSLGPSFNPE-SSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQ-LGKPNV 79
           +L LG +FNP+ +S  F T++Y+FKPAS+D ++  S+     N+VTV   N++  G P+ 
Sbjct: 22  ELKLGATFNPKNTSTAFHTIKYDFKPASVDTSRMASVDVGSNNQVTVTVPNSESSGVPHT 81

Query: 80  AFVGSSEDYKDNDAVLFFDGET--FRLERLHR--AVKQLRH------LRQPGESAATAAG 139
            + G+  +Y   + ++ +D ET    +E+L+    VK+ R+      ++ PG++      
Sbjct: 82  VYKGNQREYA-KECLMIYDKETGAITIEKLNHNIQVKKTRNEVTNKSVQLPGQNMGQPHN 141

Query: 140 AGPSTTASLPQSLTVP 144
            G +  A  P ++ VP
Sbjct: 142 QGANGAA--PVAVPVP 154

[Close]

BLAST of Sed0006370 vs. ExPASy TrEMBL
Match: A0A6J1JWD6 (ELL-associated factor 1 OS=Cucurbita maxima OX=3661 GN=LOC111489464 PE=3 SV=1)

HSP 1 Score: 481.1 bits (1237), Expect = 3.7e-132
Identity = 273/347 (78.67%), Postives = 293/347 (84.44%), Query Frame = 0


Query: 1   MANSNKEEPKSAPEADHWYKLSLGPSFNPESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60
           MAN+NKEEPK+AP+ D WY LSLGPSFN ESSNKFCTLRYEFKPASIDKTKPGSLKKTKE
Sbjct: 1   MANNNKEEPKTAPQPDRWYDLSLGPSFNNESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60

Query: 61  NRVTVEFQNNQLGKPNVAFVGSSEDYKDNDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
           NRVT+EFQNNQLGKPNVAFVGSSEDYK+NDAVLFFDGETFRLERLHRAVKQLRHLRQPGE
Sbjct: 61  NRVTIEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120

Query: 121 SAATAAGAGPSTTASLPQSLTVPEPRLSPPPPKVAKPMHMGRNSFPIVPVEVERIDIGDP 180
           S+A    A  ST+AS   SLT PEPRLSPP  KV KPMHMGR SFP V VEVE+IDIG+P
Sbjct: 121 SSAAGVAAASSTSASALHSLTPPEPRLSPPAAKVPKPMHMGRGSFPSVLVEVEKIDIGEP 180

Query: 181 GNTGPKSVTSSKGIADYSSDTPVVPAPSPGPKNEDEHIDIDIVDIFGSVSSDDDGNNVEE 240
           GNTG KSV +SKG ADYSSD P V APSPGPKN+DEH DIDI DIFGSVSSDD+ NN EE
Sbjct: 181 GNTGAKSVVASKGPADYSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDE-NNAEE 240

Query: 241 EKVEIGFDINNVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVDAEGRNGRT----- 300
           +KV+ GFDI NVPH NDTDDEIADVDDSGDEAEKGPNAAEALRAQV+AEGR G T     
Sbjct: 241 DKVDAGFDI-NVPHHNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAAL 300

Query: 301 -------------SSSSTSKSGSGSSSRSSSGSSDSEGSDEDSISSI 330
                        SSSS+S+SGSGSSS SSSGSSDSEG+DEDS++SI
Sbjct: 301 RAQVNAEGRDEQSSSSSSSESGSGSSSGSSSGSSDSEGTDEDSVTSI 345

[Close]

BLAST of Sed0006370 vs. ExPASy TrEMBL
Match: A0A6J1FGX9 (ELL-associated factor 1 OS=Cucurbita moschata OX=3662 GN=LOC111445589 PE=3 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 4.8e-132
Identity = 273/347 (78.67%), Postives = 293/347 (84.44%), Query Frame = 0


Query: 1   MANSNKEEPKSAPEADHWYKLSLGPSFNPESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60
           MAN+NKEEPK+AP+ D WY LSLGPSFN ESSNKFCTLRYEFKPASIDKTKPGSLKKTKE
Sbjct: 1   MANNNKEEPKTAPQPDRWYDLSLGPSFNNESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60

Query: 61  NRVTVEFQNNQLGKPNVAFVGSSEDYKDNDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
           NRVT+EFQNNQLGKPNVAFVGSSEDYK+NDAVLFFDGETFRLERLHRAVKQLRHLRQPGE
Sbjct: 61  NRVTIEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120

Query: 121 SAATAAGAGPSTTASLPQSLTVPEPRLSPPPPKVAKPMHMGRNSFPIVPVEVERIDIGDP 180
           S+A A  A  ST+AS   SLT PEPRLSPP  KV KPMHMGR SFP V VEVE+IDIG+P
Sbjct: 121 SSAAAVAAASSTSASALHSLTPPEPRLSPPAAKVPKPMHMGRGSFPSVLVEVEKIDIGEP 180

Query: 181 GNTGPKSVTSSKGIADYSSDTPVVPAPSPGPKNEDEHIDIDIVDIFGSVSSDDDGNNVEE 240
           GNTG K V +SKG ADYSSD P V APSPGPKN+DEH DIDI DIFGSVSSDD+ NN EE
Sbjct: 181 GNTGAKPVVASKGPADYSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDE-NNAEE 240

Query: 241 EKVEIGFDINNVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVDAEGRNGRT----- 300
           +KV+ GFDI NVPH NDTDDEIADVDDSGDEAEKGPNAAEALRAQV+AEGR G T     
Sbjct: 241 DKVDAGFDI-NVPHHNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAAL 300

Query: 301 -------------SSSSTSKSGSGSSSRSSSGSSDSEGSDEDSISSI 330
                        SSSS+S+SGSGSSS SSSGSSDSEG+DEDS++SI
Sbjct: 301 RAQVNAEGRDEQSSSSSSSESGSGSSSGSSSGSSDSEGTDEDSVTSI 345

[Close]

BLAST of Sed0006370 vs. ExPASy TrEMBL
Match: A0A6J1DE82 (ELL-associated factor 1 OS=Momordica charantia OX=3673 GN=LOC111019621 PE=3 SV=1)

HSP 1 Score: 467.2 bits (1201), Expect = 5.5e-128
Identity = 261/331 (78.85%), Postives = 290/331 (87.61%), Query Frame = 0


Query: 1   MANSNKEEPKSAPEADHWYKLSLGPSFNPESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60
           MAN NKEEPK+AP+++ WY LSLGPSF  ESSNKFCTLRYEFKPASIDKTKPGSLKKTK+
Sbjct: 1   MANDNKEEPKTAPQSERWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKD 60

Query: 61  NRVTVEFQNNQLGKPNVAFVGSSEDYKDNDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
           NRVTVEFQNNQLG+PNVAFVGSSED K+NDAVLFFDGETFRLERLHRAV  LRH+RQ  E
Sbjct: 61  NRVTVEFQNNQLGRPNVAFVGSSEDCKENDAVLFFDGETFRLERLHRAVTHLRHVRQADE 120

Query: 121 SAATAAGAGPSTTASLPQSLTVPEPRLSPPPPKVAKPMHMGRNSFPIVPVEVERIDIGDP 180
           SA T      S T S+P SLTVPEPRLSPP  KV KPMHMGR+SFP+VPVEVERIDIG+P
Sbjct: 121 SATT------SITTSVPHSLTVPEPRLSPPVAKVTKPMHMGRSSFPVVPVEVERIDIGEP 180

Query: 181 GNTGPKSVTSSKGIADYSSDTPVV--PAPSPGPKNEDEHIDIDIVDIFGSVSSDDDGNNV 240
           GNTG  SV +SK +ADY+SD P V  P+PSPG  N+DEH DIDI +IFGSVSS DDGNNV
Sbjct: 181 GNTGASSVAASKEVADYTSDPPNVSAPSPSPGMDNDDEHQDIDIDEIFGSVSS-DDGNNV 240

Query: 241 EEEKVEIGFDINNVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVDAEGRNGRTSSS 300
           EEEK+++GFDI NVPH NDTDDEIADVDDSGDEA+KGPNAAEALRAQV+AEGR+ +TSSS
Sbjct: 241 EEEKIDVGFDI-NVPHHNDTDDEIADVDDSGDEAQKGPNAAEALRAQVNAEGRDKQTSSS 300

Query: 301 STSKSGSGSSSRSSSGSSDSEGSDEDSISSI 330
           S+S+SGSGSSS SSSGSSDSE SDEDS++SI
Sbjct: 301 SSSESGSGSSSGSSSGSSDSEHSDEDSVTSI 323

[Close]

BLAST of Sed0006370 vs. ExPASy TrEMBL
Match: A0A1S3C0N3 (ELL-associated factor 2 OS=Cucumis melo OX=3656 GN=LOC103495125 PE=3 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 1.5e-125
Identity = 262/342 (76.61%), Postives = 285/342 (83.33%), Query Frame = 0


Query: 1   MANSNKEEPKSAPEADHWYKLSLGPSFNPESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60
           MAN+  EEPK+AP+ D WY LSLGPSF  ESSNKFCT RYEFKPASIDKTKPG LKKTKE
Sbjct: 1   MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKE 60

Query: 61  NRVTVEFQNNQLGKPNVAFVGSSEDYKDNDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
           NRVTVEFQN+Q GKPN++F+GSSEDYKDNDAVLFFDGETFRLERLHRAV QLRHLRQPGE
Sbjct: 61  NRVTVEFQNSQPGKPNLSFIGSSEDYKDNDAVLFFDGETFRLERLHRAVNQLRHLRQPGE 120

Query: 121 SAATAAGAGPSTT-------------ASLPQSLTVPEPRLSPPPPKVAKPMHMGRNSFPI 180
           SAA AA A  +TT             AS+  SLT PEPRLSPP  KVAKPMHMGR+SFP 
Sbjct: 121 SAAAAATATATTTTAGVAAPAATPSSASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPT 180

Query: 181 VPVEVERIDIGDPGNTGPKSVTSSKGIADYSSDTPVVPAPSPGPKNEDEHIDIDIVDIFG 240
           +PVEVERIDIG+PGN G K V +SKG+ DYSSD P     SPG KN+DEH DIDI DIFG
Sbjct: 181 MPVEVERIDIGEPGNAGAKPVVASKGLTDYSSDPPNASVSSPGLKNDDEHQDIDIDDIFG 240

Query: 241 SVSSDDDGNNVEEEKVEIGFDINNVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVD 300
           SVSS DDGNN EEE+VE GFDI N+PHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQV+
Sbjct: 241 SVSS-DDGNNAEEERVETGFDI-NIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVN 300

Query: 301 AEGRNGRTSSSSTSKSGSGSSSRSSSGSSDSEGSDEDSISSI 330
           AEGR  ++SSSS+S SGSGSSS SSS SSDSEGSDEDS++SI
Sbjct: 301 AEGRAEQSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI 340

[Close]

BLAST of Sed0006370 vs. ExPASy TrEMBL
Match: A0A0A0KM56 (EAF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G210030 PE=3 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 5.4e-123
Identity = 260/339 (76.70%), Postives = 285/339 (84.07%), Query Frame = 0


Query: 1   MANSNKEEPKSAPEADHWYKLSLGPSFNPESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60
           MAN+  EEPK+AP+ D WY LSLGPSF  ESSNKFCT RYEFKPASIDKTKPG LKKTKE
Sbjct: 1   MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKE 60

Query: 61  NRVTVEFQNNQLGKPNVAFVGSSEDYKDNDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
           NRVTVEFQN+Q GKPN++FVGSSEDYK+NDAVLFFDGETFRLERLHRAV QLRHLRQPGE
Sbjct: 61  NRVTVEFQNSQPGKPNLSFVGSSEDYKENDAVLFFDGETFRLERLHRAVNQLRHLRQPGE 120

Query: 121 SAA----------TAAGAGPSTTASLPQSLTVPEPRLSPPPPKVAKPMHMGRNSFPIVPV 180
           SAA           AA A   TTAS+  SLT PEPRLSPP  KV+KPMHMGR+SFP +PV
Sbjct: 121 SAAAVAAPATTAGVAAPAAAPTTASVLHSLTPPEPRLSPPVTKVSKPMHMGRSSFPTMPV 180

Query: 181 EVERIDIGDPGNTGPKSVTSSKGIADYSSDTPVVPAPSPGPKNEDEHIDIDIVDIFGSVS 240
           EVERIDIG+PGN G K+V +SKG+ +YSSD P V   SPG KN+DEH DIDI DIFGSVS
Sbjct: 181 EVERIDIGEPGNAGAKTV-ASKGLTNYSSDPPNVSVSSPGLKNDDEHQDIDIDDIFGSVS 240

Query: 241 SDDDGNNVEEEKVEIGFDINNVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVDAEG 300
           S DDGNN EEE+VE GFDI N+PHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQV+AEG
Sbjct: 241 S-DDGNNAEEERVEPGFDI-NIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEG 300

Query: 301 RNGRTSSSSTSKSGSGSSSRSSSGSSDSEGSDEDSISSI 330
           R  ++SSSS+S SGSGSSS SSS SSDSE SDEDS++SI
Sbjct: 301 RAEQSSSSSSSGSGSGSSSGSSSASSDSEASDEDSVTSI 336

[Close]

BLAST of Sed0006370 vs. TAIR 10
Match: AT1G71080.1 (RNA polymerase II transcription elongation factor )

HSP 1 Score: 254.2 bits (648), Expect = 1.4e-67
Identity = 184/353 (52.12%), Postives = 230/353 (65.16%), Query Frame = 0


Query: 1   MANSNKEEPKSAPEADHWYKLSLGPSFNPESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60
           M+N +++EP +AP+ D WY L LG S   +SS+KFCTLRYEFKPASIDK + GS+ K K+
Sbjct: 1   MSNHSRDEPSTAPKTDQWYDLVLGSSAKDDSSHKFCTLRYEFKPASIDKNRSGSMHKKKD 60

Query: 61  NRVTVEFQNNQLGKPNVAFVGSSEDYKDNDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
           NRV+VEFQNNQ GKP V F GSSEDYK++DAVLFFDGE FRLERLHRAV QLRH+R PGE
Sbjct: 61  NRVSVEFQNNQPGKPKVTFEGSSEDYKESDAVLFFDGEKFRLERLHRAVTQLRHVRTPGE 120

Query: 121 SAATAAGAGPSTTASLPQSLTVPEPRLSPPPPKVAKPMHMGRNSFPIVPVEVERIDIGDP 180
           SAA +  A P             E RLS P  + AK   + R+  P VPVEVERI+IG P
Sbjct: 121 SAAASQSAVP------------VEHRLS-PVGRAAKSPQVNRSLLPDVPVEVERIEIGKP 180

Query: 181 GNTGPKSVTSSKGIADYSSDTPVVPAPSP-GPKNE--DEHIDIDIVDIFGSVSSDDDGNN 240
            N+   + T +            VPA SP   KN+  DEH +ID+V+IFGS + ++D  N
Sbjct: 181 ENSAEPANTGN------------VPATSPVEDKNDDGDEHQEIDLVEIFGSFTPEND--N 240

Query: 241 VEEEKVEIGFDINNVPHQ-NDTDDEIADV-DDSGDEAEKGPNAAEALRAQVDAEGRNGRT 300
            E+E  + G  + ++  Q + T++EIADV DDSG E EKG NAAEALRAQV+AE +  +T
Sbjct: 241 AEKENADGGEYVESLNKQLSMTEEEIADVDDDSGGEGEKGLNAAEALRAQVNAEVQKSQT 300

Query: 301 SSSSTS----------------KSGSGSSSRSSSGSSD--SEGS-DEDSISSI 330
           SSSS+S                 SGSGS  +SSSGSS   S GS DED ++S+
Sbjct: 301 SSSSSSSGSSSGSDSDGRSKSVSSGSGSGGQSSSGSSSRGSGGSDDEDEVNSV 326

[Close]

BLAST of Sed0006370 vs. TAIR 10
Match: AT5G38050.1 (RNA polymerase II transcription elongation factor )

HSP 1 Score: 169.1 bits (427), Expect = 6.0e-42
Identity = 138/339 (40.71%), Postives = 178/339 (52.51%), Query Frame = 0


Query: 3   NSNKEEPKSAPEADHWYKLSLGPSF---NPESSNKFCTLRYEFKPASIDKTKPGSLKKTK 62
           +++ EEPK APE + WY ++LGP+    N   S KFCTLRYEFKPASID TKPG L K+K
Sbjct: 2   DNHNEEPKIAPEPNRWYNITLGPTLLNNNHSYSPKFCTLRYEFKPASIDSTKPGLLHKSK 61

Query: 63  ENRVTVEFQNNQLGKPNVAFVGSSEDY--KDNDAVLFFDGETFRLERLHRAVKQLRHLRQ 122
           +N+VT+EFQNNQL KP V F G SEDY  +D DA+LFFDGE FRLE+LHR+VK+L+ LR 
Sbjct: 62  DNKVTLEFQNNQLNKPKVRFDGVSEDYNDRDKDAILFFDGENFRLEKLHRSVKRLKCLRV 121

Query: 123 PGESAATAAGAGPSTTASLPQSLTVPEPRLSPPPPKVAKPMHMGRNSFPIVPVEVERIDI 182
           P ESA+ +                    ++ PP  K               PV++  IDI
Sbjct: 122 PDESASASRVV----------------TKIVPPVEK---------------PVKMAHIDI 181

Query: 183 GDPGNTGPKSVTSSKGIADYSSDTPVVPAPSPGPKNEDEHIDIDIVDIFGSVSSDDDGNN 242
            +P               D+  D                           ++  D++   
Sbjct: 182 NNP--------------VDFEEDV--------------------------NIEDDNEEET 241

Query: 243 VEEEKVEI-GFDIN-NVPHQND-TDDEIADVDDSGDEAEKGPNAAEALRAQVDAE----- 302
           +  ++ +  G DI+ N+PH  +  DDEIA VD + DE+ KG NAAEALRAQV+AE     
Sbjct: 242 LSRKEFQTGGLDIDINLPHPAEMEDDEIAVVDINDDESYKGLNAAEALRAQVNAEAREES 269

Query: 303 --------GRNGRTSSSSTSKSGSGSSSRSSSGSSDSEG 321
                   GR   +S S    SGSGSSS S S  S SEG
Sbjct: 302 RKSSSSGSGRESESSESGVESSGSGSSSTSESRKSGSEG 269

The following BLAST results are available for this feature:

BLAST of Sed0006370 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022993461.1	7.6e-132	78.67	ELL-associated factor 1 [Cucurbita maxima] >XP_023551438.1 ELL-associated factor...	[more]
XP_022939831.1	1.0e-131	78.67	ELL-associated factor 1 [Cucurbita moschata] >KAG7016756.1 Ell-associated factor...	[more]
KAG6579241.1	2.9e-131	78.39	Ell-associated factor Eaf, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_038893321.1	3.8e-131	76.94	ELL-associated factor 2-like [Benincasa hispida]	[more]
XP_022151706.1	1.1e-127	78.85	ELL-associated factor 1 [Momordica charantia] >XP_022151707.1 ELL-associated fac...	[more]

BLAST of Sed0006370 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B3NA01	4.7e-07	30.00	Ell-associated factor Eaf OS=Drosophila erecta OX=7220 GN=Eaf PE=3 SV=2	[more]
B4P1N5	6.1e-07	31.97	Ell-associated factor Eaf OS=Drosophila yakuba OX=7245 GN=Eaf PE=3 SV=1	[more]
B4HQT6	8.0e-07	31.34	Ell-associated factor Eaf OS=Drosophila sechellia OX=7238 GN=Eaf PE=3 SV=1	[more]
B4LMA2	1.8e-06	33.85	Ell-associated factor Eaf OS=Drosophila virilis OX=7244 GN=Eaf PE=3 SV=1	[more]
Q7JRJ1	6.7e-06	30.15	Ell-associated factor Eaf OS=Drosophila melanogaster OX=7227 GN=Eaf PE=1 SV=1	[more]

BLAST of Sed0006370 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JWD6	3.7e-132	78.67	ELL-associated factor 1 OS=Cucurbita maxima OX=3661 GN=LOC111489464 PE=3 SV=1	[more]
A0A6J1FGX9	4.8e-132	78.67	ELL-associated factor 1 OS=Cucurbita moschata OX=3662 GN=LOC111445589 PE=3 SV=1	[more]
A0A6J1DE82	5.5e-128	78.85	ELL-associated factor 1 OS=Momordica charantia OX=3673 GN=LOC111019621 PE=3 SV=1	[more]
A0A1S3C0N3	1.5e-125	76.61	ELL-associated factor 2 OS=Cucumis melo OX=3656 GN=LOC103495125 PE=3 SV=1	[more]
A0A0A0KM56	5.4e-123	76.70	EAF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G210030 PE=3 SV...	[more]

BLAST of Sed0006370 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G71080.1	1.4e-67	52.12	RNA polymerase II transcription elongation factor	[more]
AT5G38050.1	6.0e-42	40.71	RNA polymerase II transcription elongation factor	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019194	Transcription elongation factor Eaf, N-terminal	PFAM	PF09816	EAF	coord: 19..117 e-value: 1.4E-20 score: 73.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..161
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..329
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 183..197
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 290..329
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..142
None	No IPR available	PANTHER	PTHR15970:SF13	TRANSCRIPTION ELOGNATION FACTOR EAF-RELATED	coord: 1..329
IPR027093	EAF family	PANTHER	PTHR15970	ELL-ASSOCIATED FACTOR EAF	coord: 1..329

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0006370.1	Sed0006370.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0034243	regulation of transcription elongation from RNA polymerase II promoter
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0032783	super elongation complex
molecular_function	GO:0003711	transcription elongation regulator activity