Sed0005628 (gene) Chayote v1

Overview


Name	Sed0005628
Type	gene
Organism	Sechium edule (Chayote v1)
Description	ARID domain-containing protein
Location	LG04: 925647 .. 926686 (+)
RNA-Seq Expression	Sed0005628
Synteny	Sed0005628

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGTCTGTAATTTTTCCCTCTCATTCCCCTTTTTTTTGTTCCTTTTTAAAACCCCAAAATCTCACTCTTCTTCTTCCTCACTTCAACAAAAATGAAACCCATAAAAAACCAAACCCCCAAATCCAAACCCACTGCCCCGCCGGCCGATCTTCTCGTCTGTTTTCCGGCCCGGTCCCGGCTCACCCTTCTTCCCAAACCCATCTCCAGTCCGGCCAGAGCTCCGGCCGAACCGAACCGCCGCCACCACAAAAAACCGGCACAGGCCAGTCCTCTGCTCTGGGCCAAAGAAATGTCGTCGGAGCCCACTTCGCCGAAGGTCACCTGCGCCGGCCAGATCAAAACCCGACCCGAATCGCACCGCCCCAAGAACTGGCAATCGGTCATGGAAGAAATCGAGCGGATTCACAACAAGAAGAAAATATCCAGTTGGGGAAATCGCAACCCGAGTCAAAACCCGAATCGAAACCGAAATCAAAATCAAAATCAGTTGGGTTTCAAGAGAGAAATCGTTAACTTCCTGTCGTGTTTACGCGGATTCCGTTTCGATTTCCGTTGCTTCAGAGGCTTCCCTCAAATCACATCCGACGACGAAGAGTCCGAATCCGACCCGGAATCGGAACCCGACTCAGAACCGGCCGAATCTTCGCGGAAAACCATGTTTTCGGAATGGTTCATGGTTCTGCAAGAAGAAGAAGCGAAACCCAGAAACGACGGCGTTTGTTCCGTGGATCTTCAGCCTTGCTCTGTTCCGCCGGCGAATGCTCTGTTATTGATGCGTTGTAGATCGGCGCCGTCAATGGGCTGGATCGAACGGAAAGCAAACGAAGAAGAAGAAGAAAAGGAATCGAAAATGAGCTTGAAATTGTTAATGGAGGAAGAAAAGGAAAGATTGGTGGTGATGGATTATGATTCTGATTTTTACAAGCTTTCATCGGACATTGCGAAAGAGACGTGGGTTGTGAGTGGAACTGCTAAATCTAATGATGATCCATTGATGAGAACTCGGAGTTGGAAGAGATGAAGATGATGGGATAAACAAA

mRNA sequence

CTGTCTGTAATTTTTCCCTCTCATTCCCCTTTTTTTTGTTCCTTTTTAAAACCCCAAAATCTCACTCTTCTTCTTCCTCACTTCAACAAAAATGAAACCCATAAAAAACCAAACCCCCAAATCCAAACCCACTGCCCCGCCGGCCGATCTTCTCGTCTGTTTTCCGGCCCGGTCCCGGCTCACCCTTCTTCCCAAACCCATCTCCAGTCCGGCCAGAGCTCCGGCCGAACCGAACCGCCGCCACCACAAAAAACCGGCACAGGCCAGTCCTCTGCTCTGGGCCAAAGAAATGTCGTCGGAGCCCACTTCGCCGAAGGTCACCTGCGCCGGCCAGATCAAAACCCGACCCGAATCGCACCGCCCCAAGAACTGGCAATCGGTCATGGAAGAAATCGAGCGGATTCACAACAAGAAGAAAATATCCAGTTGGGGAAATCGCAACCCGAGTCAAAACCCGAATCGAAACCGAAATCAAAATCAAAATCAGTTGGGTTTCAAGAGAGAAATCGTTAACTTCCTGTCGTGTTTACGCGGATTCCGTTTCGATTTCCGTTGCTTCAGAGGCTTCCCTCAAATCACATCCGACGACGAAGAGTCCGAATCCGACCCGGAATCGGAACCCGACTCAGAACCGGCCGAATCTTCGCGGAAAACCATGTTTTCGGAATGGTTCATGGTTCTGCAAGAAGAAGAAGCGAAACCCAGAAACGACGGCGTTTGTTCCGTGGATCTTCAGCCTTGCTCTGTTCCGCCGGCGAATGCTCTGTTATTGATGCGTTGTAGATCGGCGCCGTCAATGGGCTGGATCGAACGGAAAGCAAACGAAGAAGAAGAAGAAAAGGAATCGAAAATGAGCTTGAAATTGTTAATGGAGGAAGAAAAGGAAAGATTGGTGGTGATGGATTATGATTCTGATTTTTACAAGCTTTCATCGGACATTGCGAAAGAGACGTGGGTTGTGAGTGGAACTGCTAAATCTAATGATGATCCATTGATGAGAACTCGGAGTTGGAAGAGATGAAGATGATGGGATAAACAAA

Coding sequence (CDS)

ATGAAACCCATAAAAAACCAAACCCCCAAATCCAAACCCACTGCCCCGCCGGCCGATCTTCTCGTCTGTTTTCCGGCCCGGTCCCGGCTCACCCTTCTTCCCAAACCCATCTCCAGTCCGGCCAGAGCTCCGGCCGAACCGAACCGCCGCCACCACAAAAAACCGGCACAGGCCAGTCCTCTGCTCTGGGCCAAAGAAATGTCGTCGGAGCCCACTTCGCCGAAGGTCACCTGCGCCGGCCAGATCAAAACCCGACCCGAATCGCACCGCCCCAAGAACTGGCAATCGGTCATGGAAGAAATCGAGCGGATTCACAACAAGAAGAAAATATCCAGTTGGGGAAATCGCAACCCGAGTCAAAACCCGAATCGAAACCGAAATCAAAATCAAAATCAGTTGGGTTTCAAGAGAGAAATCGTTAACTTCCTGTCGTGTTTACGCGGATTCCGTTTCGATTTCCGTTGCTTCAGAGGCTTCCCTCAAATCACATCCGACGACGAAGAGTCCGAATCCGACCCGGAATCGGAACCCGACTCAGAACCGGCCGAATCTTCGCGGAAAACCATGTTTTCGGAATGGTTCATGGTTCTGCAAGAAGAAGAAGCGAAACCCAGAAACGACGGCGTTTGTTCCGTGGATCTTCAGCCTTGCTCTGTTCCGCCGGCGAATGCTCTGTTATTGATGCGTTGTAGATCGGCGCCGTCAATGGGCTGGATCGAACGGAAAGCAAACGAAGAAGAAGAAGAAAAGGAATCGAAAATGAGCTTGAAATTGTTAATGGAGGAAGAAAAGGAAAGATTGGTGGTGATGGATTATGATTCTGATTTTTACAAGCTTTCATCGGACATTGCGAAAGAGACGTGGGTTGTGAGTGGAACTGCTAAATCTAATGATGATCCATTGATGAGAACTCGGAGTTGGAAGAGATGA

Protein sequence

MKPIKNQTPKSKPTAPPADLLVCFPARSRLTLLPKPISSPARAPAEPNRRHHKKPAQASPLLWAKEMSSEPTSPKVTCAGQIKTRPESHRPKNWQSVMEEIERIHNKKKISSWGNRNPSQNPNRNRNQNQNQLGFKREIVNFLSCLRGFRFDFRCFRGFPQITSDDEESESDPESEPDSEPAESSRKTMFSEWFMVLQEEEAKPRNDGVCSVDLQPCSVPPANALLLMRCRSAPSMGWIERKANEEEEEKESKMSLKLLMEEEKERLVVMDYDSDFYKLSSDIAKETWVVSGTAKSNDDPLMRTRSWKR

Homology

[Close]

BLAST of Sed0005628 vs. NCBI nr
Match: XP_023546364.1 (uncharacterized protein LOC111805493 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 393.3 bits (1009), Expect = 2.0e-105
Identity = 232/343 (67.64%), Postives = 258/343 (75.22%), Query Frame = 0


Query: 1   MKPIKNQTPKSKPTAPPADLLVCFPARSRLTLLPKPISSPARAPAEPNRRHHKK-----P 60
           MK   N  PKS   APPADLLVCFPAR+RLTLLPKP  SPARA AEP+RRH KK      
Sbjct: 1   MKSRNNTKPKS--IAPPADLLVCFPARARLTLLPKPTCSPARASAEPHRRHQKKAPPPSQ 60

Query: 61  AQASPLLWAKEMSSEPTSPKVTCAGQIKTRPESHR-PKNWQSVMEEIERIHNKKKISSWG 120
           +QASPLLWAKEM+SEPTSPKVTCAGQIK +P + R  KNWQSVMEEIERIH KKKI +WG
Sbjct: 61  SQASPLLWAKEMASEPTSPKVTCAGQIKIKPHARRSTKNWQSVMEEIERIHKKKKIPNWG 120

Query: 121 NRNPSQNPNRNRNQNQNQLGFKREIVNFLSCLRGFRFDFRCFRGFPQ---ITS---DDEE 180
           N+   QNP           GFKREIVNFLSCLRGFRFDFRCFRGFP+   IT+   D+EE
Sbjct: 121 NQIQDQNP----------FGFKREIVNFLSCLRGFRFDFRCFRGFPESDDITTEEEDEEE 180

Query: 181 SESDPESEPDSEPAE----SSRKTMFSEWFMVLQ-----EEEAKPRNDGVCSVDLQPCSV 240
            ES+PESE + E A     S R+TMFS+WFMVLQ     EEE KPRND   + +LQPCSV
Sbjct: 181 YESEPESEAEYEEAHTEATSKRRTMFSKWFMVLQDEEEEEEETKPRND---TGELQPCSV 240

Query: 241 PPANALLLMRCRSAPSMGWIERK-----ANEEEEEKESKMSLKLLMEEE------KERLV 300
           PP NALLLMRCRSAPS GWIERK       +E+EEK+SK+SLKLLMEEE      KE LV
Sbjct: 241 PPPNALLLMRCRSAPSTGWIERKPKQEQQEQEQEEKQSKISLKLLMEEEKEAVAKKESLV 300

Query: 301 VMDYDSDFYKLSSDIAKETWVVSG--TAKSNDDPLMRTRSWKR 310
           VMDYD+DFYKLSSDIAKETWVVSG  T++ NDDP +R+RSWKR
Sbjct: 301 VMDYDADFYKLSSDIAKETWVVSGSSTSRCNDDPFLRSRSWKR 328

[Close]

BLAST of Sed0005628 vs. NCBI nr
Match: KAG6598680.1 (hypothetical protein SDJN03_08458, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 391.7 bits (1005), Expect = 5.7e-105
Identity = 224/332 (67.47%), Postives = 252/332 (75.90%), Query Frame = 0


Query: 9   PKSKPTAPPADLLVCFPARSRLTLLPKPISSPARAPAEPNRRHHKK-----PAQASPLLW 68
           PK K  APPADLLVCFPAR+RLTLLPKP  SPARA AEP+RRH KK      +QASPLLW
Sbjct: 7   PKPKSMAPPADLLVCFPARARLTLLPKPTCSPARASAEPHRRHQKKAPPPSQSQASPLLW 66

Query: 69  AKEMSSEPTSPKVTCAGQIKTRPESHR-PKNWQSVMEEIERIHNKKKISSWGNRNPSQNP 128
           AKEM+SEPTSPKVTCAGQIK +P + R  KNWQSVMEEIERIH KKKI +WGN+   QNP
Sbjct: 67  AKEMASEPTSPKVTCAGQIKIKPHARRSTKNWQSVMEEIERIHKKKKIPNWGNQIQDQNP 126

Query: 129 NRNRNQNQNQLGFKREIVNFLSCLRGFRFDFRCFRGFPQ----ITSDDEESESDPESEPD 188
                      GFKREIVNFLSCLRGFRFDFRCFRGFP+     T +++E E + E+E +
Sbjct: 127 ----------FGFKREIVNFLSCLRGFRFDFRCFRGFPESDDITTEEEDEEEYESEAEYE 186

Query: 189 SEPAE--SSRKTMFSEWFMVLQ------EEEAKPRNDGVCSVDLQPCSVPPANALLLMRC 248
            EP E  S R+TMFS+WFMVLQ      EEE KPRND   + +LQPCSVPP NALLLMRC
Sbjct: 187 EEPTEATSKRRTMFSKWFMVLQDEEEDEEEETKPRND---TGELQPCSVPPPNALLLMRC 246

Query: 249 RSAPSMGWIERK-----ANEEEEEKESKMSLKLLMEEE------KERLVVMDYDSDFYKL 308
           RSAPS GWIERK       +E+EEK+SK+SLKLLMEEE      KE LVVMDYD+DFYKL
Sbjct: 247 RSAPSTGWIERKPKQEQQEQEQEEKQSKISLKLLMEEEKEAVAKKESLVVMDYDADFYKL 306

Query: 309 SSDIAKETWVVSGTAKS--NDDPLMRTRSWKR 310
           SSDIAKETWVVSG++ S  NDDP +R+RSWKR
Sbjct: 307 SSDIAKETWVVSGSSSSRCNDDPFLRSRSWKR 325

[Close]

BLAST of Sed0005628 vs. NCBI nr
Match: XP_022962582.1 (uncharacterized protein LOC111462985 [Cucurbita moschata])

HSP 1 Score: 387.1 bits (993), Expect = 1.4e-103
Identity = 221/326 (67.79%), Postives = 249/326 (76.38%), Query Frame = 0


Query: 15  APPADLLVCFPARSRLTLLPKPISSPARAPAEPNRRHHKK-----PAQASPLLWAKEMSS 74
           APPADLLVCFPAR+RLTLLPKP  SPARA AEP+RRH KK      +QASPLLWAKEM+S
Sbjct: 2   APPADLLVCFPARARLTLLPKPTCSPARASAEPHRRHQKKAPPPSQSQASPLLWAKEMAS 61

Query: 75  EPTSPKVTCAGQIKTRPESHR-PKNWQSVMEEIERIHNKKKISSWGNRNPSQNPNRNRNQ 134
           EPTSPKVTCAGQIK +P + R  KNWQSVMEEIERIH KKKI +WGN+   QNP      
Sbjct: 62  EPTSPKVTCAGQIKIKPHARRSTKNWQSVMEEIERIHKKKKIPNWGNQIRDQNP------ 121

Query: 135 NQNQLGFKREIVNFLSCLRGFRFDFRCFRGFPQ----ITSDDEESESDPESEPDSEPAE- 194
                GFKREIVNFLSCLRGFRFDFRCFRGFP+     T +++E E + E+E + EP E 
Sbjct: 122 ----FGFKREIVNFLSCLRGFRFDFRCFRGFPESDDITTEEEDEEEYESEAEYEEEPTEA 181

Query: 195 -SSRKTMFSEWFMVLQ------EEEAKPRNDGVCSVDLQPCSVPPANALLLMRCRSAPSM 254
            S R+TMFS+WFMVLQ      EEE KPRND   + +LQPCSVPP NALLLMRCRSAPS 
Sbjct: 182 TSKRRTMFSKWFMVLQDEEEDEEEETKPRND---TGELQPCSVPPPNALLLMRCRSAPST 241

Query: 255 GWIERK-----ANEEEEEKESKMSLKLLMEEE------KERLVVMDYDSDFYKLSSDIAK 310
           GWIERK       +E+EEK+SK+SLKLLMEEE      KE LVVMDYD+DFYKLSSDIAK
Sbjct: 242 GWIERKPKQEQQEQEQEEKQSKISLKLLMEEEKVAVAKKESLVVMDYDADFYKLSSDIAK 301

[Close]

BLAST of Sed0005628 vs. NCBI nr
Match: XP_022131621.1 (uncharacterized protein LOC111004752 [Momordica charantia])

HSP 1 Score: 376.7 bits (966), Expect = 1.9e-100
Identity = 226/332 (68.07%), Postives = 259/332 (78.01%), Query Frame = 0


Query: 4   IKNQTPK--SKPTAPPADLLVCFPARSRLTLLPKPISSPARAPAEP--NRRHH--KK--- 63
           +K + PK  +KPTAPPADLLVCFPAR+RLTLLPKP  SPARAPA+    RRHH  KK   
Sbjct: 1   MKRRDPKAIAKPTAPPADLLVCFPARARLTLLPKPACSPARAPADSALTRRHHHPKKPPA 60

Query: 64  ----PAQASPLLW-AKEMSSEPTSPKVTCAGQIKTRPESHRPKNWQSVMEEIERIHNKKK 123
               PA ASPLLW AKEM SEPTSPKVTCAGQIK RP  H  KNWQSVMEEIERIH KKK
Sbjct: 61  VAAAPAHASPLLWGAKEMGSEPTSPKVTCAGQIKIRP--HATKNWQSVMEEIERIHKKKK 120

Query: 124 ISSWGNRNPSQNPNRNRNQNQNQLGFKREIVNFLSCLRGFRFDFRCFRGFPQ--ITSDDE 183
           I           PN +RN+NQN LGFKREIVNFLSCLRGFRFDFRCFRG P+  +T++D 
Sbjct: 121 I-----------PN-SRNRNQNPLGFKREIVNFLSCLRGFRFDFRCFRGIPESDVTTED- 180

Query: 184 ESESDPESEPDSEPAESSRKTMFSEWFMVLQ--EEEAKPRNDGVCSVDLQPCSVPPANAL 243
           ESES+PESE + EPAE+SR TMFS+WFMVLQ  EEE +PRN GV + + +P S PP NAL
Sbjct: 181 ESESEPESESEEEPAEASR-TMFSKWFMVLQEEEEETRPRNGGVSAAEAEPSSGPPPNAL 240

Query: 244 LLMRCRSAPSMGWIERKAN-EEEEEKESKMSLKLLMEEEK-----ERLVVMDYDSDFYKL 303
           LLMRCRSAPSMG ++R    + EEE++SK+SLKLLME+E+     E LVVMDYD+DFY+L
Sbjct: 241 LLMRCRSAPSMGCLQRNPKAKAEEEQQSKISLKLLMEKEEVNPKNESLVVMDYDADFYRL 300

Query: 304 SSDIAKETWVVSGTAKSN--DDPLMRTRSWKR 310
           S+DIAKETWVVSG+ KSN  DDPL+R+RSWKR
Sbjct: 301 SADIAKETWVVSGSNKSNESDDPLIRSRSWKR 316

[Close]

BLAST of Sed0005628 vs. NCBI nr
Match: KAA0064832.1 (myotubularin-related protein [Cucumis melo var. makuwa])

HSP 1 Score: 362.5 bits (929), Expect = 3.7e-96
Identity = 224/332 (67.47%), Postives = 249/332 (75.00%), Query Frame = 0


Query: 10  KSKPTAPPADLLVCFPARSRLTLLPKPISSPARAPAEPNRRHHKKPAQASPLLWAKEMSS 69
           KSKPTAPPADLLVCFPAR+ LTLLP    SPARAPAEP+RRH++K AQ SPL WAKEMSS
Sbjct: 11  KSKPTAPPADLLVCFPARAHLTLLP----SPARAPAEPHRRHYRK-AQPSPLPWAKEMSS 70

Query: 70  EPTSPKVTCAGQIKTRPESHR-PKNWQSVMEEIERIHNKKKISSWGNRNPSQNPNRNRNQ 129
           EPTSPKVTCAGQIK RP +HR  KNWQSVMEEIERIHNKKK           NP R    
Sbjct: 71  EPTSPKVTCAGQIKIRPHAHRSTKNWQSVMEEIERIHNKKK-----------NPIR---- 130

Query: 130 NQNQLGFKREIVNFLSCLRGFRFDFRCFRGFPQ--ITSDDEESES------DPESEPDSE 189
           NQN LGFKREIVNFLSCLRGFRFDFRCFRGFPQ  IT+DDE+ E       +PESE +SE
Sbjct: 131 NQNPLGFKREIVNFLSCLRGFRFDFRCFRGFPQSDITTDDEDDEEEEFEQHEPESESESE 190

Query: 190 PAE--SSRKTMFSEWFMVLQ--EEEAKP-RNDGVCSVDLQP--CSVPPANALLLMRCRSA 249
             E  +  +TMFSEWFMVLQ  EEE KP  ND V S++ QP   SVPP NALLLMRCRSA
Sbjct: 191 SEEEPTRGRTMFSEWFMVLQEEEEETKPINNDAVSSLEFQPSSVSVPPPNALLLMRCRSA 250

Query: 250 PSMGWIERK---ANEEEEEKESKMSLKLLMEEEKE-------RLVVMDYDSDFYKLSSDI 309
           P+    + K     E+EEE++SK+SLKLLMEEEKE        L+VMDYD+DFYKLSSDI
Sbjct: 251 PNSLLRKPKQEQEQEQEEEEKSKISLKLLMEEEKEMVTAKKKSLMVMDYDADFYKLSSDI 310

[Close]

BLAST of Sed0005628 vs. ExPASy TrEMBL
Match: A0A6J1HD24 (uncharacterized protein LOC111462985 OS=Cucurbita moschata OX=3662 GN=LOC111462985 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 6.8e-104
Identity = 221/326 (67.79%), Postives = 249/326 (76.38%), Query Frame = 0


Query: 15  APPADLLVCFPARSRLTLLPKPISSPARAPAEPNRRHHKK-----PAQASPLLWAKEMSS 74
           APPADLLVCFPAR+RLTLLPKP  SPARA AEP+RRH KK      +QASPLLWAKEM+S
Sbjct: 2   APPADLLVCFPARARLTLLPKPTCSPARASAEPHRRHQKKAPPPSQSQASPLLWAKEMAS 61

Query: 75  EPTSPKVTCAGQIKTRPESHR-PKNWQSVMEEIERIHNKKKISSWGNRNPSQNPNRNRNQ 134
           EPTSPKVTCAGQIK +P + R  KNWQSVMEEIERIH KKKI +WGN+   QNP      
Sbjct: 62  EPTSPKVTCAGQIKIKPHARRSTKNWQSVMEEIERIHKKKKIPNWGNQIRDQNP------ 121

Query: 135 NQNQLGFKREIVNFLSCLRGFRFDFRCFRGFPQ----ITSDDEESESDPESEPDSEPAE- 194
                GFKREIVNFLSCLRGFRFDFRCFRGFP+     T +++E E + E+E + EP E 
Sbjct: 122 ----FGFKREIVNFLSCLRGFRFDFRCFRGFPESDDITTEEEDEEEYESEAEYEEEPTEA 181

Query: 195 -SSRKTMFSEWFMVLQ------EEEAKPRNDGVCSVDLQPCSVPPANALLLMRCRSAPSM 254
            S R+TMFS+WFMVLQ      EEE KPRND   + +LQPCSVPP NALLLMRCRSAPS 
Sbjct: 182 TSKRRTMFSKWFMVLQDEEEDEEEETKPRND---TGELQPCSVPPPNALLLMRCRSAPST 241

Query: 255 GWIERK-----ANEEEEEKESKMSLKLLMEEE------KERLVVMDYDSDFYKLSSDIAK 310
           GWIERK       +E+EEK+SK+SLKLLMEEE      KE LVVMDYD+DFYKLSSDIAK
Sbjct: 242 GWIERKPKQEQQEQEQEEKQSKISLKLLMEEEKVAVAKKESLVVMDYDADFYKLSSDIAK 301

[Close]

BLAST of Sed0005628 vs. ExPASy TrEMBL
Match: A0A6J1BQ03 (uncharacterized protein LOC111004752 OS=Momordica charantia OX=3673 GN=LOC111004752 PE=4 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 9.2e-101
Identity = 226/332 (68.07%), Postives = 259/332 (78.01%), Query Frame = 0


Query: 4   IKNQTPK--SKPTAPPADLLVCFPARSRLTLLPKPISSPARAPAEP--NRRHH--KK--- 63
           +K + PK  +KPTAPPADLLVCFPAR+RLTLLPKP  SPARAPA+    RRHH  KK   
Sbjct: 1   MKRRDPKAIAKPTAPPADLLVCFPARARLTLLPKPACSPARAPADSALTRRHHHPKKPPA 60

Query: 64  ----PAQASPLLW-AKEMSSEPTSPKVTCAGQIKTRPESHRPKNWQSVMEEIERIHNKKK 123
               PA ASPLLW AKEM SEPTSPKVTCAGQIK RP  H  KNWQSVMEEIERIH KKK
Sbjct: 61  VAAAPAHASPLLWGAKEMGSEPTSPKVTCAGQIKIRP--HATKNWQSVMEEIERIHKKKK 120

Query: 124 ISSWGNRNPSQNPNRNRNQNQNQLGFKREIVNFLSCLRGFRFDFRCFRGFPQ--ITSDDE 183
           I           PN +RN+NQN LGFKREIVNFLSCLRGFRFDFRCFRG P+  +T++D 
Sbjct: 121 I-----------PN-SRNRNQNPLGFKREIVNFLSCLRGFRFDFRCFRGIPESDVTTED- 180

Query: 184 ESESDPESEPDSEPAESSRKTMFSEWFMVLQ--EEEAKPRNDGVCSVDLQPCSVPPANAL 243
           ESES+PESE + EPAE+SR TMFS+WFMVLQ  EEE +PRN GV + + +P S PP NAL
Sbjct: 181 ESESEPESESEEEPAEASR-TMFSKWFMVLQEEEEETRPRNGGVSAAEAEPSSGPPPNAL 240

Query: 244 LLMRCRSAPSMGWIERKAN-EEEEEKESKMSLKLLMEEEK-----ERLVVMDYDSDFYKL 303
           LLMRCRSAPSMG ++R    + EEE++SK+SLKLLME+E+     E LVVMDYD+DFY+L
Sbjct: 241 LLMRCRSAPSMGCLQRNPKAKAEEEQQSKISLKLLMEKEEVNPKNESLVVMDYDADFYRL 300

Query: 304 SSDIAKETWVVSGTAKSN--DDPLMRTRSWKR 310
           S+DIAKETWVVSG+ KSN  DDPL+R+RSWKR
Sbjct: 301 SADIAKETWVVSGSNKSNESDDPLIRSRSWKR 316

[Close]

BLAST of Sed0005628 vs. ExPASy TrEMBL
Match: A0A5A7V8Z9 (Myotubularin-related protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001440 PE=4 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 1.8e-96
Identity = 224/332 (67.47%), Postives = 249/332 (75.00%), Query Frame = 0


Query: 10  KSKPTAPPADLLVCFPARSRLTLLPKPISSPARAPAEPNRRHHKKPAQASPLLWAKEMSS 69
           KSKPTAPPADLLVCFPAR+ LTLLP    SPARAPAEP+RRH++K AQ SPL WAKEMSS
Sbjct: 11  KSKPTAPPADLLVCFPARAHLTLLP----SPARAPAEPHRRHYRK-AQPSPLPWAKEMSS 70

Query: 70  EPTSPKVTCAGQIKTRPESHR-PKNWQSVMEEIERIHNKKKISSWGNRNPSQNPNRNRNQ 129
           EPTSPKVTCAGQIK RP +HR  KNWQSVMEEIERIHNKKK           NP R    
Sbjct: 71  EPTSPKVTCAGQIKIRPHAHRSTKNWQSVMEEIERIHNKKK-----------NPIR---- 130

Query: 130 NQNQLGFKREIVNFLSCLRGFRFDFRCFRGFPQ--ITSDDEESES------DPESEPDSE 189
           NQN LGFKREIVNFLSCLRGFRFDFRCFRGFPQ  IT+DDE+ E       +PESE +SE
Sbjct: 131 NQNPLGFKREIVNFLSCLRGFRFDFRCFRGFPQSDITTDDEDDEEEEFEQHEPESESESE 190

Query: 190 PAE--SSRKTMFSEWFMVLQ--EEEAKP-RNDGVCSVDLQP--CSVPPANALLLMRCRSA 249
             E  +  +TMFSEWFMVLQ  EEE KP  ND V S++ QP   SVPP NALLLMRCRSA
Sbjct: 191 SEEEPTRGRTMFSEWFMVLQEEEEETKPINNDAVSSLEFQPSSVSVPPPNALLLMRCRSA 250

Query: 250 PSMGWIERK---ANEEEEEKESKMSLKLLMEEEKE-------RLVVMDYDSDFYKLSSDI 309
           P+    + K     E+EEE++SK+SLKLLMEEEKE        L+VMDYD+DFYKLSSDI
Sbjct: 251 PNSLLRKPKQEQEQEQEEEEKSKISLKLLMEEEKEMVTAKKKSLMVMDYDADFYKLSSDI 310

[Close]

BLAST of Sed0005628 vs. ExPASy TrEMBL
Match: A0A1S3BDB9 (uncharacterized protein LOC103488403 OS=Cucumis melo OX=3656 GN=LOC103488403 PE=4 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 1.8e-96
Identity = 223/333 (66.97%), Postives = 250/333 (75.08%), Query Frame = 0


Query: 10  KSKPTAPPADLLVCFPARSRLTLLPKPISSPARAPAEPNRRHHKKPAQASPLLWAKEMSS 69
           KSKPTAPPADLLVCFPAR+ LTLLP    SPARAPAEP+RRH++K AQ SPL WAKEMSS
Sbjct: 8   KSKPTAPPADLLVCFPARAHLTLLP----SPARAPAEPHRRHYRK-AQPSPLPWAKEMSS 67

Query: 70  EPTSPKVTCAGQIKTRPESHR-PKNWQSVMEEIERIHNKKKISSWGNRNPSQNPNRNRNQ 129
           EPTSPKVTCAGQIK RP +HR  KNWQSVMEEIERIHNKKK           NP R    
Sbjct: 68  EPTSPKVTCAGQIKIRPHAHRSTKNWQSVMEEIERIHNKKK-----------NPIR---- 127

Query: 130 NQNQLGFKREIVNFLSCLRGFRFDFRCFRGFPQ--ITSDDEESES------DPESEPDSE 189
           NQN LGFKREIVNFLSCLRGFRFDFRCFRGFPQ  IT+DDE+ E       +PESE +SE
Sbjct: 128 NQNPLGFKREIVNFLSCLRGFRFDFRCFRGFPQSDITTDDEDDEEEEFEQHEPESESESE 187

Query: 190 PAE--SSRKTMFSEWFMVLQ--EEEAKP-RNDGVCSVDLQP--CSVPPANALLLMRCRSA 249
             E  +  +TMFSEWFMVLQ  EEE KP  ND V S++ QP   SVPP NALLLMRCRSA
Sbjct: 188 SEEEPTRGRTMFSEWFMVLQEEEEETKPINNDAVSSLEFQPSSVSVPPPNALLLMRCRSA 247

Query: 250 PS----MGWIERKANEEEEEKESKMSLKLLMEEEKE-------RLVVMDYDSDFYKLSSD 309
           P+        E++  +E+EE++SK+SLKLLMEEEKE        L+VMDYD+DFYKLSSD
Sbjct: 248 PNSLLRKPKQEQEQEQEQEEEKSKISLKLLMEEEKEMVTAKKKSLMVMDYDADFYKLSSD 307

[Close]

BLAST of Sed0005628 vs. ExPASy TrEMBL
Match: A0A0A0LMI6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G345900 PE=4 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 2.6e-95
Identity = 224/340 (65.88%), Postives = 246/340 (72.35%), Query Frame = 0


Query: 10  KSKPTAPPADLLVCFPARSRLTLLPKPISSPARAPAEPNRRHHKKPAQASPLLWAKEMSS 69
           KSKPTAPPADLLVCFPAR+ LTLLP    SPAR PAEP+RRH++K AQ SPL WAKEMSS
Sbjct: 11  KSKPTAPPADLLVCFPARAHLTLLP----SPARPPAEPHRRHYRK-AQPSPLPWAKEMSS 70

Query: 70  EPTSPKVTCAGQIKTRPESHR-PKNWQSVMEEIERIHNKKKISSWGNRNPSQNPNRNRNQ 129
           EPTSPKVTCAGQIK RP SHR  KNWQSVMEEIERIHNKKK           NP R    
Sbjct: 71  EPTSPKVTCAGQIKIRPHSHRSTKNWQSVMEEIERIHNKKK-----------NPIR---- 130

Query: 130 NQNQLGFKREIVNFLSCLRGFRFDFRCFRGFPQ--ITSDDEESES------DPESEPDSE 189
           NQN  GFKREIVNFLSCLRGFRFDFRCFRGFPQ  IT+DDE+ E       +PESE  SE
Sbjct: 131 NQNPFGFKREIVNFLSCLRGFRFDFRCFRGFPQSDITTDDEDDEEEVFEQHEPESESQSE 190

Query: 190 PAE--SSRKTMFSEWFMVLQ--EEEAKP-RNDGVCSVDLQP--CSVPPANALLLMRCRSA 249
             E  +  +TMFSEWFMVLQ  EEE KP  ND V S++ QP   SVPP NALLLMRCRSA
Sbjct: 191 SEEEPTRGRTMFSEWFMVLQEGEEETKPINNDAVSSLEFQPSSVSVPPPNALLLMRCRSA 250

Query: 250 PS-----------MGWIERKANEEEEEKESKMSLKLLMEEEKE-------RLVVMDYDSD 309
           P+               E +  EEEEE++SK+SLKLLMEEEKE        L+VMDYD+D
Sbjct: 251 PNSLLRKPKQQEEKEEEEEEEEEEEEEEKSKISLKLLMEEEKEMVTAKKKSLMVMDYDAD 310

[Close]

BLAST of Sed0005628 vs. TAIR 10
Match: AT1G78110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22230.1); Has 5452 Blast hits to 3541 proteins in 289 species: Archae - 4; Bacteria - 165; Metazoa - 1756; Fungi - 532; Plants - 205; Viruses - 141; Other Eukaryotes - 2649 (source: NCBI BLink). )

HSP 1 Score: 240.4 bits (612), Expect = 2.0e-63
Identity = 162/348 (46.55%), Postives = 205/348 (58.91%), Query Frame = 0


Query: 18  ADLLVCFPARSRLTLLPKPISSPAR-APAEPNRR-HHKKP----------AQASPLLWAK 77
           ADLLVCFP+R+ L L PKPI SP+R + +  NRR HH++              SP+LWAK
Sbjct: 18  ADLLVCFPSRTHLALTPKPICSPSRPSDSSTNRRPHHRRQLSKLSGGGGGGHGSPVLWAK 77

Query: 78  EMSS---------EPTSPKVTCAGQIKTRPE--SHRPKNWQSVMEEIERIHNKKKISSWG 137
           + SS         EPTSPKVTCAGQIK RP     R KNWQSVMEEIERIH+        
Sbjct: 78  QASSKNMGGDEIAEPTSPKVTCAGQIKVRPSKCGGRGKNWQSVMEEIERIHD-------- 137

Query: 138 NRNPSQNPNRNRNQNQNQLGFKREIVNFLSCLRGFRFDFRCFRGF--PQITSDDEESESD 197
                     NR+Q++   G K++++ FL+CLR  +FDFRCF  F    +TSDD+E E D
Sbjct: 138 ----------NRSQSK-FFGLKKDVMGFLTCLRNIKFDFRCFGDFRHADVTSDDDEEEDD 197

Query: 198 PESEPD---SEPAESSRKTMFSEWFMVLQEEEAK---PRNDGVC-------SVDLQPCSV 257
            + E +       E + KT+FS+WFMVLQEE+      +N+  C         + +P +V
Sbjct: 198 DDDEEEEVVEGEEEENSKTVFSKWFMVLQEEQNNKDDDKNNNKCDEKRDLEDTETEP-AV 257

Query: 258 PPANALLLMRCRSAPSMGWIE---------RKANEEEEEKES----------KMSLKLLM 309
           PP NALLLMRCRSAP+  W+E          K  E++EEKE+          K  L+ LM
Sbjct: 258 PPPNALLLMRCRSAPAKSWLEERMKVKTEQEKREEQKEEKETEDQETSMKTKKKDLRSLM 317

[Close]

BLAST of Sed0005628 vs. TAIR 10
Match: AT1G22230.1 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78110.1); Has 2358 Blast hits to 1759 proteins in 159 species: Archae - 2; Bacteria - 36; Metazoa - 1046; Fungi - 203; Plants - 157; Viruses - 72; Other Eukaryotes - 842 (source: NCBI BLink). )

HSP 1 Score: 205.3 bits (521), Expect = 7.1e-53
Identity = 149/334 (44.61%), Postives = 189/334 (56.59%), Query Frame = 0


Query: 12  KPTAPPADLLVCFPARSRLTLLPKPISSPA-----RAPAEPNRRHHKKPAQASPLL---- 71
           K +   ADL+VCFP+R+ L+L  K ISSP+     R  A  +RR   K + +   +    
Sbjct: 8   KSSGYSADLMVCFPSRAHLSLPSKSISSPSSSFNRRQNAPHHRRSISKLSSSGGGVRQNR 67

Query: 72  -WAKEMSSEPTSPKVTCAGQIKTRPESH--RPKNWQSVMEEIERIHNKKKISSWGNRNPS 131
              +E+  EPTSPKVTCAGQIK R        KNWQS+M EIE+IH  K  S +      
Sbjct: 68  GGGREVVEEPTSPKVTCAGQIKVRSSKRDGGGKNWQSLMAEIEKIHRSKSESKF------ 127

Query: 132 QNPNRNRNQNQNQLGFKREIVNFLSCLRGFRFDFRCFRGFP--QITSDDEESESDPESEP 191
                         G KR+++ FL+CLR   FDFRCF  FP   I SDDEE + + E E 
Sbjct: 128 -------------FGIKRDVMGFLTCLRD--FDFRCFGAFPPVDIISDDEEEDEEEEEED 187

Query: 192 DSEPAESSRKTMFSEWFMVLQE----EEAKPRNDGVCSVDLQPCSVPPANALLLMRCRSA 251
           + E  + S  T+FS+W MVL E    EE     + V S D++  +VPP NALLLMRCRSA
Sbjct: 188 EEEDEDESSGTVFSKWLMVLHEKQNNEECVDGKENVFS-DVE-TAVPPPNALLLMRCRSA 247

Query: 252 PSMGWIERK--------------ANEEEEEKE---SKMSLKLLMEEEKE-RLVVMDYDSD 310
           P   W E K                EEEEEK+   +K  L+ LMEEEK+  LVVM+YD++
Sbjct: 248 PVKNWSEEKKEETEEGDNRVKQSGEEEEEEKDRVGNKKDLRSLMEEEKKMNLVVMNYDTN 307

The following BLAST results are available for this feature:

BLAST of Sed0005628 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023546364.1	2.0e-105	67.64	uncharacterized protein LOC111805493 [Cucurbita pepo subsp. pepo]	[more]
KAG6598680.1	5.7e-105	67.47	hypothetical protein SDJN03_08458, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022962582.1	1.4e-103	67.79	uncharacterized protein LOC111462985 [Cucurbita moschata]	[more]
XP_022131621.1	1.9e-100	68.07	uncharacterized protein LOC111004752 [Momordica charantia]	[more]
KAA0064832.1	3.7e-96	67.47	myotubularin-related protein [Cucumis melo var. makuwa]	[more]

BLAST of Sed0005628 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0005628 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HD24	6.8e-104	67.79	uncharacterized protein LOC111462985 OS=Cucurbita moschata OX=3662 GN=LOC1114629...	[more]
A0A6J1BQ03	9.2e-101	68.07	uncharacterized protein LOC111004752 OS=Momordica charantia OX=3673 GN=LOC111004...	[more]
A0A5A7V8Z9	1.8e-96	67.47	Myotubularin-related protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A1S3BDB9	1.8e-96	66.97	uncharacterized protein LOC103488403 OS=Cucumis melo OX=3656 GN=LOC103488403 PE=...	[more]
A0A0A0LMI6	2.6e-95	65.88	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G345900 PE=4 SV=1	[more]

BLAST of Sed0005628 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G78110.1	2.0e-63	46.55	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G22230.1	7.1e-53	44.61	unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein matc...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 242..262
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..186
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..109
None	No IPR available	PANTHER	PTHR33448	CHLOROPLAST PROTEIN HCF243-RELATED	coord: 13..309
None	No IPR available	PANTHER	PTHR33448:SF3	OS09G0370000 PROTEIN	coord: 13..309

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0005628.1	Sed0005628.1	mRNA