Sed0005445 (gene) Chayote v1

Overview


Name	Sed0005445
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Autophagy-related protein
Location	LG01: 3758469 .. 3761949 (+)
RNA-Seq Expression	Sed0005445
Synteny	Sed0005445

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTGTACACCAACCCCATTCGAAATCACAAATTTTGCAAATCCATTTGCAGAGCTCGAGGTTCTTTTTTGGAAGAAATGGAGATTTGGATCGCAACTTGGGAGATATTCATGGCGGATTCGTAACTTGATTCTCCTTCAATTCCATTTATTTTACCGATAGATTTTCTCGCCGTCTTTGATTTGGTATCCGATTCTTCGATTCTCCATTGCCTTGCCGATTTCGAAAACCTGTTCTTGATTCTTTTGATTTTCTTTTGGCTGCAGTTGGCGTTTCTTTCGATGGCTAAATCCTCGTTTAAATTGGAGCATCCTCTGGGTTAGTTTTTCCTGTTCATACTGAAATCGACGCTCCTATTTTGTGGTTTTAATCTTTTGTTTCGTTTGATTTGATTATGGCTTCATTGAATGGTTGATTTCTGATCTGAATGTTCGCTTTTGGTGGGGGATTTTGTACTTTATCGATCCGAGTATTGAATTTTAATTGTGATGTTAAAGCTGAAGCTTATAATTAGGATATGTTTAATGCTTTACATATATTCTTAATCCTCCACATTGCATATGTGTTCGTTTATTTATTTATTTTTTTTATTTATGACCCGCTTGCTTGCAAACAGTGGACTATTGTTTCATTTGGATGTGAAGGAAACCCGTAAGAAATTAGTTTTATATAGGTAGCCATTATGAATTGAACCTATCACCTCTTAGTTCCATTGGGCCCTCTTGACCAGTTTAGGATGGTCGTGTGTGTTAGGAATTTGGAAAAATATTAGTAAGAAGATCTTCTACATTGAAAAGATTCAAGGAATCAGAAGGGTTAAAGGATTATAAAAGGTTCAAGAAATCGGACTATAAATAGAGCCACTAGATTTGGTTTCAAAGCATCCCAGTCCAAAACATTTTAAGTTTGATGTACTAACTCTAGTTAAATTCATTTTATATTCTCTTTTGGAGACAAAGGGTGAGAGTAGTATAAACTTTGAAGAGAGTGTTTATGTGAGTGGAGTCGAGAGAGAGAATTCTATGTGATTGTAACAATTTTTCATATAGTGGAAGTTTTTTCTGGTCGTGATTTTTTTATCTAATTTGAGAATTTTTCTACGTAAATCTTGTGTTCTCATTTTTTTTTTCTTTTTAATTTCTCACTTATTTTTTTGCTTATTCCTGGGGAAGGATTTTCCCCAACAGTGTGTTCGGTTATTAATTTGATTGATGAGACTGAAACCCAAATACTCATGTTATATGATGAACAACAAAAGATTAATACAACCAATAATGTTAGATGGAGGAGTATTTTTTGTTGTTGGAACGTTTAATGGAAATGATCATTGCTTGATGTTGTTTATACTCGCGATAAACACTACAGAAGATAAAAAAAAATTACCTTCAATTTTGAATTGACAATCTGAAAATTCCAGAAAGGAGACAGGTTGAATCTGCTAGGATCCGAGAGAAGTATCCTGACAGAATTCCGGTATGATCTTTTTAATTTATGGATTCATGCAATTGTGTGAACTTTCTTGAAATATTTATTTTTTAAAATGTTGTTTAATTTAGGTGATTGTGGAAAGGGCTGAAAAGACTGATGTCCCAGAAATTGATAAGAAAAAGTAAGTTGCCTTTTGTTTTCTGGAATAGCTGAAACACATTTCCATTTTCTTTAGGAAATCACCTTATTCCTGTAAAACTATGCTTTTCAATTCTATAAGGCGACATTTGGAGCGAGAGAATGAGAATCATTATGGAGAGGGAATGTGGGGAGAATCCGAGAAGAAATATTATCGATATTTGAGCTGAAGGGATGATTATGAGAAAACCATTACCCATGTTTGTGATGCTGAAAATCGGGAGGAGCAGACTAGTGATTATAGAGAATAAAAAGTGGTCATGAATAGTGATCATAGAGATGAATAGTGATTATGAATATTGGTCATAAGAGAATGATTGTCGGTAGCCTAATCGTGAGTGTGAGAATTATTCCCTATAATCATACCAACTTTCCTTGCCCCAAACACACCCAAAATATCTTGTGAACAGCATATAAAGCGATTAAACTTTATGAATGCTAAAATGCGATTCTTTAAGAGTGCTTTAGCTTGGCGGCGTGTGGCTTATCCTATGAGTAGCAGTTCCAATGAAGTTAGTTTATCGGGGTTTTTACTTGTACCTTGACTTGGTGAAATGGTCCAATCCCACCATTTTCTCCTTGGTTCAAGTTCTAGCTATATTGATCTCAGTATCATTCTCAAAAGAACTTCGGTTGTTTTCCGTCACTGTTGGTTCTGTAGGACTGTTGTAACATGTTCAATAGCACACAAGTTCAAAATTAATATGTAGACTACATTGAGATGGAACTATCATGGTTTAATTTAGCCTTCAATAATAACCATGCGAATAATAAAAAATGAGTTTAATAGTCACCTACCTAGAATTTAATATCCTACGTGTTTTCTTGACAATGAAATGTTAACAAATTAACCTAGTAGTTAATCAAAAGGTCATAGATAATCCATTGTGGCCACCTACATAAGAATCAATTTCCTAAGGATTTTCTTGACAACCAATTGTTGAGGGCCAAAAAATTTATCACATGAAAATAGTCGTGGTTTAGGTAGGCTGATTTGGACACTCATGGATGTAAAAAAAAGTGAAATTGTTTGTGCGTAAGTTGACTCATACATTGATGATCGACGAATTAAAAAACTACATAGAGATTGAATACCAATGGCAACACGCATGCATGAACCATTTCACGAAATATGTGTCCAGATAGTCTAAAGTCTCGATAGTTAGCTCACTGTCTTCCGGTTAAAATATATATTCCAAGCAACATTCTCTAGTGGTGGATTTGGATGGAGAAATCTCTATTTTTCTTCCCGTATGATGTGTAGGGAAAGTAAAACAATTTGTATGTTTTGGTTTTTTATTTTATTTTATAGGGAACAGACTTTCAAATTTTCTTTGAAGGCCTAAATATATGTTTCTGAGCTTCAAAATGAATAATATCAAGAATTTTCAGGATTTGATAGTTAGAAGAGTTATGGATAATATCAAGATTTAAGCATGTTGCTCTTACACAATCAAAAGTACTCTTCTTCAAAAGGCTGTAATCTAAAGGGAAATTGTGCTACTGTTTCTATTGATGACAGATATTTAGTTCCTGCTGATTTAACTGTTGGTCAGTTTGTATACGTAGTCCGAAAGAAGATCAAGCTCAGCCCTGATAAGGCCATCTTCATGTTTGTCCAGAATCTTCTGCCCCCAATTGGTAAGAGCAAAAACATTAGTTGCAGCACTTTGGGAATGTAGTTTTATTTATCATATCTTGTGCATAATTTTGATTTTATCATTTGTCTGATTCTAAATATTGGTTTTGTTTTGCAGCTGTTATGATGTCTGCAATGTATGAGGAACATAAGGATGAGGATGGTTTCCTCTATATGACCTACAGCGGTGAAAACACATTCGGGGCGTGCTGA

mRNA sequence

ATGAAGTGTACACCAACCCCATTCGAAATCACAAATTTTGCAAATCCATTTGCAGAGCTCGAGGTTCTTTTTTGGAAGAAATGGAGATTTGGATCGCAACTTGGGAGATATTCATGGCGGATTCATTTTCTCGCCGTCTTTGATTTGTTGGCGTTTCTTTCGATGGCTAAATCCTCGTTTAAATTGGAGCATCCTCTGGAAAGGAGACAGGTTGAATCTGCTAGGATCCGAGAGAAGTATCCTGACAGAATTCCGGTGATTGTGGAAAGGGCTGAAAAGACTGATGTCCCAGAAATTGATAAGAAAAAATATTTAGTTCCTGCTGATTTAACTGTTGGTCAGTTTGTATACGTAGTCCGAAAGAAGATCAAGCTCAGCCCTGATAAGGCCATCTTCATGTTTGTCCAGAATCTTCTGCCCCCAATTGCTGTTATGATGTCTGCAATGTATGAGGAACATAAGGATGAGGATGGTTTCCTCTATATGACCTACAGCGGTGAAAACACATTCGGGGCGTGCTGA

Coding sequence (CDS)

ATGAAGTGTACACCAACCCCATTCGAAATCACAAATTTTGCAAATCCATTTGCAGAGCTCGAGGTTCTTTTTTGGAAGAAATGGAGATTTGGATCGCAACTTGGGAGATATTCATGGCGGATTCATTTTCTCGCCGTCTTTGATTTGTTGGCGTTTCTTTCGATGGCTAAATCCTCGTTTAAATTGGAGCATCCTCTGGAAAGGAGACAGGTTGAATCTGCTAGGATCCGAGAGAAGTATCCTGACAGAATTCCGGTGATTGTGGAAAGGGCTGAAAAGACTGATGTCCCAGAAATTGATAAGAAAAAATATTTAGTTCCTGCTGATTTAACTGTTGGTCAGTTTGTATACGTAGTCCGAAAGAAGATCAAGCTCAGCCCTGATAAGGCCATCTTCATGTTTGTCCAGAATCTTCTGCCCCCAATTGCTGTTATGATGTCTGCAATGTATGAGGAACATAAGGATGAGGATGGTTTCCTCTATATGACCTACAGCGGTGAAAACACATTCGGGGCGTGCTGA

Protein sequence

MKCTPTPFEITNFANPFAELEVLFWKKWRFGSQLGRYSWRIHFLAVFDLLAFLSMAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKTDVPEIDKKKYLVPADLTVGQFVYVVRKKIKLSPDKAIFMFVQNLLPPIAVMMSAMYEEHKDEDGFLYMTYSGENTFGAC

Homology

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BLAST of Sed0005445 vs. NCBI nr
Match: KAG6570885.1 (NEDD8-activating enzyme E1 regulatory subunit AXR1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 229.9 bits (585), Expect = 1.6e-56
Identity = 116/131 (88.55%), Postives = 124/131 (94.66%), Query Frame = 0


Query: 43   FLAVFDLLAFLSMAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKTDVPEIDKK 102
            F   FDL A LSMAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEK+DVPEIDKK
Sbjct: 976  FSVSFDLEASLSMAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKK 1035

Query: 103  KYLVPADLTVGQFVYVVRKKIKLSPDKAIFMFVQNLLPPIAVMMSAMYEEHKDEDGFLYM 162
            KYLVPADLTVGQFVYVVRK+IKLSP+KAIF+FV+N+LPP A MMSA+YEE+KDEDGFLYM
Sbjct: 1036 KYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYM 1095

Query: 163  TYSGENTFGAC 174
            TYSGENTFGAC
Sbjct: 1096 TYSGENTFGAC 1106

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BLAST of Sed0005445 vs. NCBI nr
Match: KAA0059575.1 (Ubiquitin-like superfamily protein [Cucumis melo var. makuwa] >TYK24205.1 Ubiquitin-like superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 226.1 bits (575), Expect = 2.3e-55
Identity = 112/122 (91.80%), Postives = 120/122 (98.36%), Query Frame = 0


Query: 52  FLSMAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKTDVPEIDKKKYLVPADLT 111
           FLSMAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEK+DVPEIDKKKYLVPADLT
Sbjct: 4   FLSMAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLT 63

Query: 112 VGQFVYVVRKKIKLSPDKAIFMFVQNLLPPIAVMMSAMYEEHKDEDGFLYMTYSGENTFG 171
           VGQFVYVVRK+IKLSP+KAIF+FV+N+LPP A MMSA+YEE+KDEDGFLYMTYSGENTFG
Sbjct: 64  VGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 123

Query: 172 AC 174
           AC
Sbjct: 124 AC 125

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BLAST of Sed0005445 vs. NCBI nr
Match: XP_004151892.1 (autophagy-related protein 8C-like [Cucumis sativus] >XP_008455886.1 PREDICTED: autophagy-related protein 8c [Cucumis melo] >XP_022943693.1 autophagy-related protein 8c [Cucurbita moschata] >XP_022943694.1 autophagy-related protein 8c [Cucurbita moschata] >XP_022986404.1 autophagy-related protein 8c [Cucurbita maxima] >XP_038902002.1 autophagy-related protein 8C-like isoform X1 [Benincasa hispida] >KGN63248.1 hypothetical protein Csa_022236 [Cucumis sativus])

HSP 1 Score: 221.1 bits (562), Expect = 7.5e-54
Identity = 109/119 (91.60%), Postives = 117/119 (98.32%), Query Frame = 0


Query: 55  MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKTDVPEIDKKKYLVPADLTVGQ 114
           MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEK+DVPEIDKKKYLVPADLTVGQ
Sbjct: 1   MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQ 60

Query: 115 FVYVVRKKIKLSPDKAIFMFVQNLLPPIAVMMSAMYEEHKDEDGFLYMTYSGENTFGAC 174
           FVYVVRK+IKLSP+KAIF+FV+N+LPP A MMSA+YEE+KDEDGFLYMTYSGENTFGAC
Sbjct: 61  FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC 119

[Close]

BLAST of Sed0005445 vs. NCBI nr
Match: XP_023512507.1 (autophagy-related protein 8c [Cucurbita pepo subsp. pepo] >XP_023512508.1 autophagy-related protein 8c [Cucurbita pepo subsp. pepo])

HSP 1 Score: 219.2 bits (557), Expect = 2.8e-53
Identity = 108/119 (90.76%), Postives = 116/119 (97.48%), Query Frame = 0


Query: 55  MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKTDVPEIDKKKYLVPADLTVGQ 114
           MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEK+DVPEIDKKKYLVPADLTVGQ
Sbjct: 1   MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQ 60

Query: 115 FVYVVRKKIKLSPDKAIFMFVQNLLPPIAVMMSAMYEEHKDEDGFLYMTYSGENTFGAC 174
           FVYVVRK+IKLSP+KAIF+FV+N+LPP A MMSA+YEE+KDEDGFLYMTYSGENTFG C
Sbjct: 61  FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGEC 119

[Close]

BLAST of Sed0005445 vs. NCBI nr
Match: KAE8673279.1 (Autophagy-related protein 8C [Hibiscus syriacus])

HSP 1 Score: 216.9 bits (551), Expect = 1.4e-52
Identity = 106/125 (84.80%), Postives = 121/125 (96.80%), Query Frame = 0


Query: 47  FDLLAFLSMAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKTDVPEIDKKKYLV 106
           F++L F++MAKSSFKLEHPLERRQ E++RIREKYPDRIPVIVERAEK+DVPEIDKKKYLV
Sbjct: 25  FNILIFVAMAKSSFKLEHPLERRQGEASRIREKYPDRIPVIVERAEKSDVPEIDKKKYLV 84

Query: 107 PADLTVGQFVYVVRKKIKLSPDKAIFMFVQNLLPPIAVMMSAMYEEHKDEDGFLYMTYSG 166
           PADLTVGQFVYVVRK+IKLSP+KAIF+FV+N+LPP A M+SA+YEE+KDEDGFLYMTYSG
Sbjct: 85  PADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMLSAIYEENKDEDGFLYMTYSG 144

Query: 167 ENTFG 172
           ENTFG
Sbjct: 145 ENTFG 149

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BLAST of Sed0005445 vs. ExPASy Swiss-Prot
Match: M1C146 (Autophagy-related protein 8C-like OS=Solanum tuberosum OX=4113 GN=ATG8CL PE=1 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 3.9e-53
Identity = 101/118 (85.59%), Postives = 114/118 (96.61%), Query Frame = 0


Query: 55  MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKTDVPEIDKKKYLVPADLTVGQ 114
           MAKSSFKLEHPLERRQ E+ARIREKYPDRIPVIVE+AE++D+P+IDKKKYLVPADLTVGQ
Sbjct: 1   MAKSSFKLEHPLERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 60

Query: 115 FVYVVRKKIKLSPDKAIFMFVQNLLPPIAVMMSAMYEEHKDEDGFLYMTYSGENTFGA 173
           FVYVVRK+IKLS +KAIF+FV+N+LPP A MMSA+YEEHKDEDGFLYMTYSGENTFG+
Sbjct: 61  FVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEEHKDEDGFLYMTYSGENTFGS 118

[Close]

BLAST of Sed0005445 vs. ExPASy Swiss-Prot
Match: Q2XPP5 (Autophagy-related protein 8A OS=Oryza sativa subsp. indica OX=39946 GN=ATG8A PE=1 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 5.6e-52
Identity = 101/118 (85.59%), Postives = 113/118 (95.76%), Query Frame = 0


Query: 55  MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKTDVPEIDKKKYLVPADLTVGQ 114
           MA++SFKLEHPLERRQ ESARIREKY DRIPVIVE+A+KTDVPEIDKKKYLVPADLTVGQ
Sbjct: 1   MARTSFKLEHPLERRQAESARIREKYSDRIPVIVEKADKTDVPEIDKKKYLVPADLTVGQ 60

Query: 115 FVYVVRKKIKLSPDKAIFMFVQNLLPPIAVMMSAMYEEHKDEDGFLYMTYSGENTFGA 173
           FVYVVRK+IKLSP+KAIF+FV+N LPP A +MSA+YEE+KDEDGFLYMTYSGENTFG+
Sbjct: 61  FVYVVRKRIKLSPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFGS 118

[Close]

BLAST of Sed0005445 vs. ExPASy Swiss-Prot
Match: Q69RC4 (Autophagy-related protein 8A OS=Oryza sativa subsp. japonica OX=39947 GN=ATG8A PE=3 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 5.6e-52
Identity = 101/118 (85.59%), Postives = 113/118 (95.76%), Query Frame = 0


Query: 55  MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKTDVPEIDKKKYLVPADLTVGQ 114
           MA++SFKLEHPLERRQ ESARIREKY DRIPVIVE+A+KTDVPEIDKKKYLVPADLTVGQ
Sbjct: 1   MARTSFKLEHPLERRQAESARIREKYSDRIPVIVEKADKTDVPEIDKKKYLVPADLTVGQ 60

Query: 115 FVYVVRKKIKLSPDKAIFMFVQNLLPPIAVMMSAMYEEHKDEDGFLYMTYSGENTFGA 173
           FVYVVRK+IKLSP+KAIF+FV+N LPP A +MSA+YEE+KDEDGFLYMTYSGENTFG+
Sbjct: 61  FVYVVRKRIKLSPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFGS 118

[Close]

BLAST of Sed0005445 vs. ExPASy Swiss-Prot
Match: Q8S927 (Autophagy-related protein 8c OS=Arabidopsis thaliana OX=3702 GN=ATG8C PE=1 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.6e-51
Identity = 100/117 (85.47%), Postives = 111/117 (94.87%), Query Frame = 0


Query: 55  MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKTDVPEIDKKKYLVPADLTVGQ 114
           MA SSFKLEHPLERRQ+ES+RIREKYPDRIPVIVERAE++DVP IDKKKYLVPADLTVGQ
Sbjct: 1   MANSSFKLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQ 60

Query: 115 FVYVVRKKIKLSPDKAIFMFVQNLLPPIAVMMSAMYEEHKDEDGFLYMTYSGENTFG 172
           FVYVVRK+IKLS +KAIF+FV+N LPP A MMSA+Y+E+KDEDGFLYMTYSGENTFG
Sbjct: 61  FVYVVRKRIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of Sed0005445 vs. ExPASy Swiss-Prot
Match: Q9SL04 (Autophagy-related protein 8d OS=Arabidopsis thaliana OX=3702 GN=ATG8D PE=1 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 2.1e-51
Identity = 99/117 (84.62%), Postives = 112/117 (95.73%), Query Frame = 0


Query: 55  MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKTDVPEIDKKKYLVPADLTVGQ 114
           MA SSFK EHPLE+RQ E+ARIREKYPDRIPVIVERAEK+DVP+ID+KKYLVPADLTVGQ
Sbjct: 1   MAISSFKHEHPLEKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQ 60

Query: 115 FVYVVRKKIKLSPDKAIFMFVQNLLPPIAVMMSAMYEEHKDEDGFLYMTYSGENTFG 172
           FVYVVRK+IKLSP+KAIF+FV+N+LPP A +MSA+YEEHKDEDGFLYM+YSGENTFG
Sbjct: 61  FVYVVRKRIKLSPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFG 117

[Close]

BLAST of Sed0005445 vs. ExPASy TrEMBL
Match: A0A5A7V165 (Autophagy-related protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold27G00050 PE=3 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 1.1e-55
Identity = 112/122 (91.80%), Postives = 120/122 (98.36%), Query Frame = 0


Query: 52  FLSMAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKTDVPEIDKKKYLVPADLT 111
           FLSMAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEK+DVPEIDKKKYLVPADLT
Sbjct: 4   FLSMAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLT 63

Query: 112 VGQFVYVVRKKIKLSPDKAIFMFVQNLLPPIAVMMSAMYEEHKDEDGFLYMTYSGENTFG 171
           VGQFVYVVRK+IKLSP+KAIF+FV+N+LPP A MMSA+YEE+KDEDGFLYMTYSGENTFG
Sbjct: 64  VGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 123

Query: 172 AC 174
           AC
Sbjct: 124 AC 125

[Close]

BLAST of Sed0005445 vs. ExPASy TrEMBL
Match: A0A6J1FV37 (Autophagy-related protein OS=Cucurbita moschata OX=3662 GN=LOC111448369 PE=3 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 3.6e-54
Identity = 109/119 (91.60%), Postives = 117/119 (98.32%), Query Frame = 0


Query: 55  MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKTDVPEIDKKKYLVPADLTVGQ 114
           MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEK+DVPEIDKKKYLVPADLTVGQ
Sbjct: 1   MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQ 60

Query: 115 FVYVVRKKIKLSPDKAIFMFVQNLLPPIAVMMSAMYEEHKDEDGFLYMTYSGENTFGAC 174
           FVYVVRK+IKLSP+KAIF+FV+N+LPP A MMSA+YEE+KDEDGFLYMTYSGENTFGAC
Sbjct: 61  FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC 119

[Close]

BLAST of Sed0005445 vs. ExPASy TrEMBL
Match: A0A6J1JFZ0 (Autophagy-related protein OS=Cucurbita maxima OX=3661 GN=LOC111484151 PE=3 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 3.6e-54
Identity = 109/119 (91.60%), Postives = 117/119 (98.32%), Query Frame = 0


Query: 55  MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKTDVPEIDKKKYLVPADLTVGQ 114
           MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEK+DVPEIDKKKYLVPADLTVGQ
Sbjct: 1   MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQ 60

Query: 115 FVYVVRKKIKLSPDKAIFMFVQNLLPPIAVMMSAMYEEHKDEDGFLYMTYSGENTFGAC 174
           FVYVVRK+IKLSP+KAIF+FV+N+LPP A MMSA+YEE+KDEDGFLYMTYSGENTFGAC
Sbjct: 61  FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC 119

[Close]

BLAST of Sed0005445 vs. ExPASy TrEMBL
Match: A0A0A0LN58 (Autophagy-related protein OS=Cucumis sativus OX=3659 GN=Csa_2G418350 PE=3 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 3.6e-54
Identity = 109/119 (91.60%), Postives = 117/119 (98.32%), Query Frame = 0


Query: 55  MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKTDVPEIDKKKYLVPADLTVGQ 114
           MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEK+DVPEIDKKKYLVPADLTVGQ
Sbjct: 1   MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQ 60

Query: 115 FVYVVRKKIKLSPDKAIFMFVQNLLPPIAVMMSAMYEEHKDEDGFLYMTYSGENTFGAC 174
           FVYVVRK+IKLSP+KAIF+FV+N+LPP A MMSA+YEE+KDEDGFLYMTYSGENTFGAC
Sbjct: 61  FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC 119

[Close]

BLAST of Sed0005445 vs. ExPASy TrEMBL
Match: A0A1S3C2M9 (Autophagy-related protein OS=Cucumis melo OX=3656 GN=LOC103495965 PE=3 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 3.6e-54
Identity = 109/119 (91.60%), Postives = 117/119 (98.32%), Query Frame = 0


Query: 55  MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKTDVPEIDKKKYLVPADLTVGQ 114
           MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEK+DVPEIDKKKYLVPADLTVGQ
Sbjct: 1   MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQ 60

Query: 115 FVYVVRKKIKLSPDKAIFMFVQNLLPPIAVMMSAMYEEHKDEDGFLYMTYSGENTFGAC 174
           FVYVVRK+IKLSP+KAIF+FV+N+LPP A MMSA+YEE+KDEDGFLYMTYSGENTFGAC
Sbjct: 61  FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC 119

[Close]

BLAST of Sed0005445 vs. TAIR 10
Match: AT1G62040.2 (Ubiquitin-like superfamily protein )

HSP 1 Score: 204.9 bits (520), Expect = 5.2e-53
Identity = 100/121 (82.64%), Postives = 114/121 (94.21%), Query Frame = 0


Query: 51  AFLSMAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKTDVPEIDKKKYLVPADL 110
           + ++MA SSFKLEHPLERRQ+ES+RIREKYPDRIPVIVERAE++DVP IDKKKYLVPADL
Sbjct: 11  SLIAMANSSFKLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADL 70

Query: 111 TVGQFVYVVRKKIKLSPDKAIFMFVQNLLPPIAVMMSAMYEEHKDEDGFLYMTYSGENTF 170
           TVGQFVYVVRK+IKLS +KAIF+FV+N LPP A MMSA+Y+E+KDEDGFLYMTYSGENTF
Sbjct: 71  TVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTF 130

Query: 171 G 172
           G
Sbjct: 131 G 131

[Close]

BLAST of Sed0005445 vs. TAIR 10
Match: AT1G62040.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 203.8 bits (517), Expect = 1.2e-52
Identity = 100/117 (85.47%), Postives = 111/117 (94.87%), Query Frame = 0


Query: 55  MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKTDVPEIDKKKYLVPADLTVGQ 114
           MA SSFKLEHPLERRQ+ES+RIREKYPDRIPVIVERAE++DVP IDKKKYLVPADLTVGQ
Sbjct: 1   MANSSFKLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQ 60

Query: 115 FVYVVRKKIKLSPDKAIFMFVQNLLPPIAVMMSAMYEEHKDEDGFLYMTYSGENTFG 172
           FVYVVRK+IKLS +KAIF+FV+N LPP A MMSA+Y+E+KDEDGFLYMTYSGENTFG
Sbjct: 61  FVYVVRKRIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of Sed0005445 vs. TAIR 10
Match: AT2G05630.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 203.4 bits (516), Expect = 1.5e-52
Identity = 99/117 (84.62%), Postives = 112/117 (95.73%), Query Frame = 0


Query: 55  MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKTDVPEIDKKKYLVPADLTVGQ 114
           MA SSFK EHPLE+RQ E+ARIREKYPDRIPVIVERAEK+DVP+ID+KKYLVPADLTVGQ
Sbjct: 1   MAISSFKHEHPLEKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQ 60

Query: 115 FVYVVRKKIKLSPDKAIFMFVQNLLPPIAVMMSAMYEEHKDEDGFLYMTYSGENTFG 172
           FVYVVRK+IKLSP+KAIF+FV+N+LPP A +MSA+YEEHKDEDGFLYM+YSGENTFG
Sbjct: 61  FVYVVRKRIKLSPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFG 117

[Close]

BLAST of Sed0005445 vs. TAIR 10
Match: AT4G21980.2 (Ubiquitin-like superfamily protein )

HSP 1 Score: 193.4 bits (490), Expect = 1.6e-49
Identity = 94/120 (78.33%), Postives = 110/120 (91.67%), Query Frame = 0


Query: 53  LSMAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKTDVPEIDKKKYLVPADLTV 112
           ++MAKSSFK+ +PLE R  ES+RIREKYPDRIPVIVE+A ++DVP+IDKKKYLVPADLTV
Sbjct: 14  IAMAKSSFKISNPLEARMSESSRIREKYPDRIPVIVEKAGQSDVPDIDKKKYLVPADLTV 73

Query: 113 GQFVYVVRKKIKLSPDKAIFMFVQNLLPPIAVMMSAMYEEHKDEDGFLYMTYSGENTFGA 172
           GQFVYVVRK+IKL  +KAIF+FV+N LPP A +MSA+YEEHKDEDGFLYMTYSGENTFG+
Sbjct: 74  GQFVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFGS 133

[Close]

BLAST of Sed0005445 vs. TAIR 10
Match: AT4G21980.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 192.2 bits (487), Expect = 3.5e-49
Identity = 94/118 (79.66%), Postives = 108/118 (91.53%), Query Frame = 0


Query: 55  MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKTDVPEIDKKKYLVPADLTVGQ 114
           MAKSSFK+ +PLE R  ES+RIREKYPDRIPVIVE+A ++DVP+IDKKKYLVPADLTVGQ
Sbjct: 1   MAKSSFKISNPLEARMSESSRIREKYPDRIPVIVEKAGQSDVPDIDKKKYLVPADLTVGQ 60

Query: 115 FVYVVRKKIKLSPDKAIFMFVQNLLPPIAVMMSAMYEEHKDEDGFLYMTYSGENTFGA 173
           FVYVVRK+IKL  +KAIF+FV+N LPP A +MSA+YEEHKDEDGFLYMTYSGENTFG+
Sbjct: 61  FVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFGS 118

The following BLAST results are available for this feature:

BLAST of Sed0005445 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6570885.1	1.6e-56	88.55	NEDD8-activating enzyme E1 regulatory subunit AXR1, partial [Cucurbita argyrospe...	[more]
KAA0059575.1	2.3e-55	91.80	Ubiquitin-like superfamily protein [Cucumis melo var. makuwa] >TYK24205.1 Ubiqui...	[more]
XP_004151892.1	7.5e-54	91.60	autophagy-related protein 8C-like [Cucumis sativus] >XP_008455886.1 PREDICTED: a...	[more]
XP_023512507.1	2.8e-53	90.76	autophagy-related protein 8c [Cucurbita pepo subsp. pepo] >XP_023512508.1 autoph...	[more]
KAE8673279.1	1.4e-52	84.80	Autophagy-related protein 8C [Hibiscus syriacus]	[more]

BLAST of Sed0005445 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
M1C146	3.9e-53	85.59	Autophagy-related protein 8C-like OS=Solanum tuberosum OX=4113 GN=ATG8CL PE=1 SV...	[more]
Q2XPP5	5.6e-52	85.59	Autophagy-related protein 8A OS=Oryza sativa subsp. indica OX=39946 GN=ATG8A PE=...	[more]
Q69RC4	5.6e-52	85.59	Autophagy-related protein 8A OS=Oryza sativa subsp. japonica OX=39947 GN=ATG8A P...	[more]
Q8S927	1.6e-51	85.47	Autophagy-related protein 8c OS=Arabidopsis thaliana OX=3702 GN=ATG8C PE=1 SV=1	[more]
Q9SL04	2.1e-51	84.62	Autophagy-related protein 8d OS=Arabidopsis thaliana OX=3702 GN=ATG8D PE=1 SV=1	[more]

BLAST of Sed0005445 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V165	1.1e-55	91.80	Autophagy-related protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A6J1FV37	3.6e-54	91.60	Autophagy-related protein OS=Cucurbita moschata OX=3662 GN=LOC111448369 PE=3 SV=...	[more]
A0A6J1JFZ0	3.6e-54	91.60	Autophagy-related protein OS=Cucurbita maxima OX=3661 GN=LOC111484151 PE=3 SV=1	[more]
A0A0A0LN58	3.6e-54	91.60	Autophagy-related protein OS=Cucumis sativus OX=3659 GN=Csa_2G418350 PE=3 SV=1	[more]
A0A1S3C2M9	3.6e-54	91.60	Autophagy-related protein OS=Cucumis melo OX=3656 GN=LOC103495965 PE=3 SV=1	[more]

BLAST of Sed0005445 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G62040.2	5.2e-53	82.64	Ubiquitin-like superfamily protein	[more]
AT1G62040.1	1.2e-52	85.47	Ubiquitin-like superfamily protein	[more]
AT2G05630.1	1.5e-52	84.62	Ubiquitin-like superfamily protein	[more]
AT4G21980.2	1.6e-49	78.33	Ubiquitin-like superfamily protein	[more]
AT4G21980.1	3.5e-49	79.66	Ubiquitin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 51..172 e-value: 6.2E-55 score: 186.5
None	No IPR available	PANTHER	PTHR10969:SF77	AUTOPHAGY-RELATED PROTEIN	coord: 50..171
None	No IPR available	CDD	cd16128	Ubl_ATG8	coord: 66..168 e-value: 4.40286E-70 score: 205.387
IPR004241	Autophagy protein Atg8 ubiquitin-like	PFAM	PF02991	Atg8	coord: 68..171 e-value: 2.1E-49 score: 166.0
IPR004241	Autophagy protein Atg8 ubiquitin-like	PANTHER	PTHR10969	MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED	coord: 50..171
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 57..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0005445.1	Sed0005445.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006914	autophagy
biological_process	GO:0006995	cellular response to nitrogen starvation
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005874	microtubule