Sed0005243 (gene) Chayote v1

Overview


Name	Sed0005243
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
Location	LG08: 37929524 .. 37933149 (-)
RNA-Seq Expression	Sed0005243
Synteny	Sed0005243

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGCAGTTGTTCAGTGACACTAATGTACGTCCAATGACCAGAGATCTTGGGTTCGAGTCTTCTCAATAAAAAACTCCTAAATTAATAATCATAAAAACACATTTATTGGAGAAAAAAAAATCATAAAAACATGTGAAACTTGGATTCAGCTGAAGCCCATCTCCGCCTCTGCAACTTCATCGAACAAATCTCACAGCTTTTCCGAGAGTGTCTAACTCTTCCCGGAGGTACTGTTTCAATCCATCGACGAGACGGCAAAACTGTTTTGTTGCCGGCGATTAACCTTCGGCACAGTAGAATCGTCATTTTGATTCAACTTTATATACTTAGAGATCCATTTCACGATGGAAGCCGCCGAGGAATCCGAAGAAACCTCCTCAACCGTAAGAATTTCTCTCTTACAACTACCCTTTCTCGGTGTTTTACTGTTTCATCATCTTAGGTCGTTTTATTGAATTAGGGTTTTCCTTGCAATGATTTGGTGTTTATGGATTCACGAGGCAATTCAAAATTTCTATTCGATGTCGAATGTTTTTTCGTTTGTTTATGATTCACTGGGTTTCGAAATGTATTTTATGATGTATTGATTGCCCATTTGAGCAGGGTACTGAAAAGTTGCCTGGAACCGTGAACTGGGGTACGGCCACAACTATTGGGGTGTTTGCAGGGATGTTTTATGGAGGAAGCAAAGAAGCCGCAGCTTCGGTGGTAAGCTCATTCAATTTTGTATGGAAAAGAAAAACCCCCAATGTTTTATAATAACTGCTTTAGACTTTGAGGAGTTTTTTTTTTTTTTTTTTTTTGGCGTTTTTCTGGCTGCTTGGATGCTGGAAAGAACTGAAAGAAAAGATAGGACTGTGTAAATCAGTAAATGAAAATATGTACTCCTTGAATTCACTATAGCTGCACATCGCTTATCAATTGTTGGAAATCCCTTTTGTAATTTCATCCTATGAAATTGTTTCTGAAAAAAACATATCACTATTCGTTCTAACCATAGGTTCACTAGCTATGTAAATATTTGGTAGGTGTTCATTTGAAAGATTTAACGAAACTCTCGAATGGATTGGTCTTTGCCTCTTCCTTACAACACTTACTATTTTGATGGGCGTACCATTTGGAGGATTAAGAAATAGAACTCTTTGGCTAGCGATCACACACGCTTTCTTGTTGCATCTTTGGCTAGAAAGAAATGAGAGAATTTTCAGAGATGTTTTTTCTTCCTTTGATCGCTTCGTAGATACTGTTATTTCTTCCCACCTTTAGGTGCTTGAAGTTTTTCTCTTCTTTTTTCATTATGAAATTGTTTCTTATTCCAAAAAAATAAGAAACTTTTGAATGGACCAATGTATTAAGAGAAGAGTAGTGAATAATCCTATTATTGCATAAGTGGCATGGCATGGCAACAAATGATTATACATCTGCCCTAGAGAATACACTTGAAACTGATAGATCACGGTGCTGATATTTCTGGGAAACCAAAGGGTAGACAGTGGGCTTCTTTTATGAACGAGATTTTCTTTTTTTTTTTTGGATAAGAAACAATTTCATTTATGGTATGAATTTTCGAAATACAAAATCCTTTATAATAAAGGCTTTTTATGAACGAGATTTTCATGTAATAGACTTTTCATTTATGACGAAGACACACTAGAAGTTTTATTTTTTCTTTGAATGGAACTCTTACGAGTTTTCGAACAGATATAAGTAATCACAAGAGAGTTCTATCATTCTAAATCTTTTTATTTTTTACTTCTAAACTCAAGGCTGTGCGAAAAAGGAAAAGAAAAGAATGGGGTTAGACAAATTCTCAGGAGATGCTAAATGCAGAAATGCCATTTGCACCTAATACATTCAGTCTCATTTGTAATTTTCCTATATGTAATAACTCTAGTGTATACAATTTAAAATTTTCCAACTTGATGAAATTTGAGAGGACTGTAACAATTGGCAGAGTAAGGATGCTGAAGTTACATTGAAGCTTGGGAGCACACCTGATAAGCGGGAACAATATAGGTTGATCAGAGATGCAATGGAGAAAAGGTTTATCAGAGTTACACGAGGCTCAATAGTTGGCGGTGTACGCCTTGGGATGTTTACAGCTACATTTTGTGGTATACAAAATCTGCTAGCTGAGAAGCGTGGTGTGCATGATGTTTTCAATGTTGCTGCAGCTGGTTCTGCCACAGCTGCTACATTTGGTCTAATATGTAAGCAGTAATACTAAATGAGAATAATTTGTTGGCTTCAAGTTATGCATTATCTTGTTTTTATCGATTTTTTACTTTCAAGATTGAGGCTTCTTATATGCTTGAAGATGTGAACTCTTCTCTTAACTTGTTTTGTAATGTTGAGTTATGGTAAACCACCAATGAACCAAAAAACCTAAGACGGTGGGTTGAGGTAAATTTAATTATACCAATTAACACTCTCCTCACCGTGTCTTCATTCTTTTGATGTCTCCCAGTGCATGGTCTAGGGACGAGCGTGGTTATCCCGAGTACACTGGAGCGAGTCTCTGATTTCTCTGTTTTAAAAAAAAAAATTAATAAAAATAACTCTCCTCACTTGTGGACTTGAAAATTTGATAATGGTCATCAAGAAGAAATCAATATTAATTGGGGATGAAAACGACTTGGCAGGGGCTCGAATTCAAGACCTTCTACTATGATACTATGTTGAATTATGTTAAACTATCAATCAACCCACAAGCTTAATGGTGGGTTGAAGTAAATTTAATCATATCAACTAACATGTTATTTTGGTTATTTTGGTTATTTTGATTACTGTGTAGTGCCAGGATCACTCAAGTGGCGGGCTAGGAATGTAGCATTGGGATCTGTTCTCGGTGCAGCATTTTGCTTCCCTCTTGGTAATAGTCTATTCGTATTTCTCTCTTCAAAGTTATATGTTGACTGTGATACTTTATAGTTGGTTTGAGGAATCCTTTTTCCACATGAAAATTTCCTGAATCATATGAACCTTTTCAAGTATATTATAAAAAACAAAAAGTGGTGGTTAAGCTTGTTCGAAAGCGTTGGGTGCCTGTTACTAAAGAGACAGTTGAATGACAGGTTGGCTTCATTTAAAGCTTGTAGAGAAAGCAAATGAAGAGACACTTGCTTATCCTAGTGCAGTTCAAAAGGGAGAATCAAAGAGTGGTGTCGGTGCGGCTATTGAGAGACTTGAAGAAAGCTTGAACAAGTAGATTCAACGACATCGCCTCTCCATTGTCCGGCAAGATATGGCGAACAAGGTCAAGTGATGTTATATGCAGACCACGTCCAACCAGGATAGTTGGCTTTTAGTTTGCTTCTTTCTGCCATGTTTTCAGGAGTTTCTGGTGGTTTGAAGACAATAGGTTACCCATCCTTTAGTATTTAGCCTTCTCATTTTCCTGGTAGATTCTCTTTATAGGGGTGGCATGGTTGAAGCCTTGAAGTCTCCCCGACCCCTTCTCGGCCAGTGTTCTATACCTTCGAAGATTTGTTTTATAAGCTAATTGTGGTGTGGGTTGATAATTTGATTCTTGCTTACAACATTTCCTCTTCAGTTTTGTTTAGACAGTGACATCGATCCTTCAATTATATGAATATTGGAGATGAATCCAAATGAATTGAAATAAT

mRNA sequence

GAGCAGTTGTTCAGTGACACTAATGTACGTCCAATGACCAGAGATCTTGGGTTCGAGTCTTCTCAATAAAAAACTCCTAAATTAATAATCATAAAAACACATTTATTGGAGAAAAAAAAATCATAAAAACATGTGAAACTTGGATTCAGCTGAAGCCCATCTCCGCCTCTGCAACTTCATCGAACAAATCTCACAGCTTTTCCGAGAGTGTCTAACTCTTCCCGGAGGTACTGTTTCAATCCATCGACGAGACGGCAAAACTGTTTTGTTGCCGGCGATTAACCTTCGGCACAGTAGAATCGTCATTTTGATTCAACTTTATATACTTAGAGATCCATTTCACGATGGAAGCCGCCGAGGAATCCGAAGAAACCTCCTCAACCGGTACTGAAAAGTTGCCTGGAACCGTGAACTGGGGTACGGCCACAACTATTGGGGTGTTTGCAGGGATGTTTTATGGAGGAAGCAAAGAAGCCGCAGCTTCGGTGAGTAAGGATGCTGAAGTTACATTGAAGCTTGGGAGCACACCTGATAAGCGGGAACAATATAGGTTGATCAGAGATGCAATGGAGAAAAGGTTTATCAGAGTTACACGAGGCTCAATAGTTGGCGGTGTACGCCTTGGGATGTTTACAGCTACATTTTGTGGTATACAAAATCTGCTAGCTGAGAAGCGTGGTGTGCATGATGTTTTCAATGTTGCTGCAGCTGGTTCTGCCACAGCTGCTACATTTGGTCTAATATTGCCAGGATCACTCAAGTGGCGGGCTAGGAATGTAGCATTGGGATCTGTTCTCGGTGCAGCATTTTGCTTCCCTCTTGGTTGGCTTCATTTAAAGCTTGTAGAGAAAGCAAATGAAGAGACACTTGCTTATCCTAGTGCAGTTCAAAAGGGAGAATCAAAGAGTGGTGTCGGTGCGGCTATTGAGAGACTTGAAGAAAGCTTGAACAAGTAGATTCAACGACATCGCCTCTCCATTGTCCGGCAAGATATGGCGAACAAGGTCAAGTGATGTTATATGCAGACCACGTCCAACCAGGATAGTTGGCTTTTAGTTTGCTTCTTTCTGCCATGTTTTCAGGAGTTTCTGGTGGTTTGAAGACAATAGGTTACCCATCCTTTAGTATTTAGCCTTCTCATTTTCCTGGTAGATTCTCTTTATAGGGGTGGCATGGTTGAAGCCTTGAAGTCTCCCCGACCCCTTCTCGGCCAGTGTTCTATACCTTCGAAGATTTGTTTTATAAGCTAATTGTGGTGTGGGTTGATAATTTGATTCTTGCTTACAACATTTCCTCTTCAGTTTTGTTTAGACAGTGACATCGATCCTTCAATTATATGAATATTGGAGATGAATCCAAATGAATTGAAATAAT

Coding sequence (CDS)

ATGGAAGCCGCCGAGGAATCCGAAGAAACCTCCTCAACCGGTACTGAAAAGTTGCCTGGAACCGTGAACTGGGGTACGGCCACAACTATTGGGGTGTTTGCAGGGATGTTTTATGGAGGAAGCAAAGAAGCCGCAGCTTCGGTGAGTAAGGATGCTGAAGTTACATTGAAGCTTGGGAGCACACCTGATAAGCGGGAACAATATAGGTTGATCAGAGATGCAATGGAGAAAAGGTTTATCAGAGTTACACGAGGCTCAATAGTTGGCGGTGTACGCCTTGGGATGTTTACAGCTACATTTTGTGGTATACAAAATCTGCTAGCTGAGAAGCGTGGTGTGCATGATGTTTTCAATGTTGCTGCAGCTGGTTCTGCCACAGCTGCTACATTTGGTCTAATATTGCCAGGATCACTCAAGTGGCGGGCTAGGAATGTAGCATTGGGATCTGTTCTCGGTGCAGCATTTTGCTTCCCTCTTGGTTGGCTTCATTTAAAGCTTGTAGAGAAAGCAAATGAAGAGACACTTGCTTATCCTAGTGCAGTTCAAAAGGGAGAATCAAAGAGTGGTGTCGGTGCGGCTATTGAGAGACTTGAAGAAAGCTTGAACAAGTAG

Protein sequence

MEAAEESEETSSTGTEKLPGTVNWGTATTIGVFAGMFYGGSKEAAASVSKDAEVTLKLGSTPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTATFCGIQNLLAEKRGVHDVFNVAAAGSATAATFGLILPGSLKWRARNVALGSVLGAAFCFPLGWLHLKLVEKANEETLAYPSAVQKGESKSGVGAAIERLEESLNK

Homology

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BLAST of Sed0005243 vs. NCBI nr
Match: XP_022136982.1 (uncharacterized protein LOC111008556 [Momordica charantia])

HSP 1 Score: 361.7 bits (927), Expect = 4.2e-96
Identity = 189/205 (92.20%), Postives = 196/205 (95.61%), Query Frame = 0


Query: 1   MEAAEESEETSSTGTEKLPGTVNWGTATTIGVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60
           MEAAE+SEET+S+GT KLPG VNWGTATTIGVFAGMFYGGSKEAAASVSKDAEVTLKLGS
Sbjct: 1   MEAAEKSEETASSGTNKLPGMVNWGTATTIGVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60

Query: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTATFCGIQNLLAEKRGVHDVFNVA 120
           TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTA F G+QNLLAEKRGVHDVFNVA
Sbjct: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVA 120

Query: 121 AAGSATAATFGLILPGSLKWRARNVALGSVLGAAFCFPLGWLHLKLVEKANE--ETLAYP 180
           AAGSATAATFG+ILPGSLKWRARNVALGSVLGAAFCFPLGWLHLKLVEKANE  + LAYP
Sbjct: 121 AAGSATAATFGVILPGSLKWRARNVALGSVLGAAFCFPLGWLHLKLVEKANEGNQALAYP 180

Query: 181 SAVQKGESKSGVGAAIERLEESLNK 204
           + VQKGESKSGVGAAIERL ESLNK
Sbjct: 181 NTVQKGESKSGVGAAIERLGESLNK 205

[Close]

BLAST of Sed0005243 vs. NCBI nr
Match: XP_022954601.1 (uncharacterized protein LOC111456818 [Cucurbita moschata] >KAG7012252.1 hypothetical protein SDJN02_25004 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 360.9 bits (925), Expect = 7.1e-96
Identity = 189/205 (92.20%), Postives = 195/205 (95.12%), Query Frame = 0


Query: 1   MEAAEESEETSSTGTEKLPGTVNWGTATTIGVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60
           MEA E+SEET S  T+KLPGTVNWGTATTI VFAGMFYGGSKEAAASVSKDAEVTLKLGS
Sbjct: 1   MEATEKSEETVSNVTKKLPGTVNWGTATTIAVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60

Query: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTATFCGIQNLLAEKRGVHDVFNVA 120
           TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTA F G+QNLLAEKRGVHDVFNVA
Sbjct: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVA 120

Query: 121 AAGSATAATFGLILPGSLKWRARNVALGSVLGAAFCFPLGWLHLKLVEKANE--ETLAYP 180
           AAGSATAATFGLILPGSLKWRARNVA+G+VLGAAFCFPLGWLHLKLVEKANE  E LAYP
Sbjct: 121 AAGSATAATFGLILPGSLKWRARNVAMGAVLGAAFCFPLGWLHLKLVEKANEGNEALAYP 180

Query: 181 SAVQKGESKSGVGAAIERLEESLNK 204
           SA+QKGESKSGVGAAIERLEESLNK
Sbjct: 181 SAIQKGESKSGVGAAIERLEESLNK 205

[Close]

BLAST of Sed0005243 vs. NCBI nr
Match: XP_038893751.1 (uncharacterized protein LOC120082584 [Benincasa hispida])

HSP 1 Score: 360.1 bits (923), Expect = 1.2e-95
Identity = 188/205 (91.71%), Postives = 194/205 (94.63%), Query Frame = 0


Query: 1   MEAAEESEETSSTGTEKLPGTVNWGTATTIGVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60
           ME AE+SEET+ST T+KLPGTVNWGTATTIGVFAGMFYGGSKEAAASVSKDAEVTLKLGS
Sbjct: 1   MEVAEKSEETASTSTKKLPGTVNWGTATTIGVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60

Query: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTATFCGIQNLLAEKRGVHDVFNVA 120
           TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTA F G+QNLLAEKR VHDVFNVA
Sbjct: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRAVHDVFNVA 120

Query: 121 AAGSATAATFGLILPGSLKWRARNVALGSVLGAAFCFPLGWLHLKLVEKANE--ETLAYP 180
           AAGSATAATFGLILPGSLKWRARNVALGSVLGAAFCFPLGWLHLKLVEKANE  E L YP
Sbjct: 121 AAGSATAATFGLILPGSLKWRARNVALGSVLGAAFCFPLGWLHLKLVEKANEGNEALGYP 180

Query: 181 SAVQKGESKSGVGAAIERLEESLNK 204
           + VQKGESKSGVGAAIER EE+LNK
Sbjct: 181 NKVQKGESKSGVGAAIERFEENLNK 205

[Close]

BLAST of Sed0005243 vs. NCBI nr
Match: XP_022994666.1 (uncharacterized protein LOC111490310 [Cucurbita maxima])

HSP 1 Score: 359.8 bits (922), Expect = 1.6e-95
Identity = 188/205 (91.71%), Postives = 195/205 (95.12%), Query Frame = 0


Query: 1   MEAAEESEETSSTGTEKLPGTVNWGTATTIGVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60
           MEA E+SEET S  T+KLPGTVNWGTATTI VFAGMFYGGSKEAAASVSKDAEVTLKLGS
Sbjct: 1   MEATEKSEETVSNVTKKLPGTVNWGTATTIAVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60

Query: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTATFCGIQNLLAEKRGVHDVFNVA 120
           TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTA F G+QNLLAEKRGVHDVFNVA
Sbjct: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVA 120

Query: 121 AAGSATAATFGLILPGSLKWRARNVALGSVLGAAFCFPLGWLHLKLVEKANE--ETLAYP 180
           AAGSATAATFGLILPGSLKWRARN+A+GSVLGAAFCFPLGWLHLKLVEKANE  E LAYP
Sbjct: 121 AAGSATAATFGLILPGSLKWRARNLAMGSVLGAAFCFPLGWLHLKLVEKANEGNEALAYP 180

Query: 181 SAVQKGESKSGVGAAIERLEESLNK 204
           SA+QKGESKSGVGAAI+RLEESLNK
Sbjct: 181 SAIQKGESKSGVGAAIQRLEESLNK 205

[Close]

BLAST of Sed0005243 vs. NCBI nr
Match: KAG6573065.1 (hypothetical protein SDJN03_26952, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 357.5 bits (916), Expect = 7.9e-95
Identity = 187/205 (91.22%), Postives = 193/205 (94.15%), Query Frame = 0


Query: 1   MEAAEESEETSSTGTEKLPGTVNWGTATTIGVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60
           MEA E+SEET S   +KLPGTVNWGTATTI VFAGMFYGGSKEAAASVSKDAEVTLKLGS
Sbjct: 1   MEATEKSEETVSNVAKKLPGTVNWGTATTIAVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60

Query: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTATFCGIQNLLAEKRGVHDVFNVA 120
           TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTA F G+QNLLAEKRGVHDVFNVA
Sbjct: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVA 120

Query: 121 AAGSATAATFGLILPGSLKWRARNVALGSVLGAAFCFPLGWLHLKLVEKANE--ETLAYP 180
           AAGSATAATFGLILPGSLKWRARNVA+G+VLGAAFCFPLGWLHLKLVEK NE  E LAYP
Sbjct: 121 AAGSATAATFGLILPGSLKWRARNVAMGAVLGAAFCFPLGWLHLKLVEKVNEGNEALAYP 180

Query: 181 SAVQKGESKSGVGAAIERLEESLNK 204
           SA+QKGESKSGVGAAIERLEESLNK
Sbjct: 181 SAIQKGESKSGVGAAIERLEESLNK 205

[Close]

BLAST of Sed0005243 vs. ExPASy TrEMBL
Match: A0A6J1C6Y4 (uncharacterized protein LOC111008556 OS=Momordica charantia OX=3673 GN=LOC111008556 PE=4 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 2.0e-96
Identity = 189/205 (92.20%), Postives = 196/205 (95.61%), Query Frame = 0


Query: 1   MEAAEESEETSSTGTEKLPGTVNWGTATTIGVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60
           MEAAE+SEET+S+GT KLPG VNWGTATTIGVFAGMFYGGSKEAAASVSKDAEVTLKLGS
Sbjct: 1   MEAAEKSEETASSGTNKLPGMVNWGTATTIGVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60

Query: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTATFCGIQNLLAEKRGVHDVFNVA 120
           TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTA F G+QNLLAEKRGVHDVFNVA
Sbjct: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVA 120

Query: 121 AAGSATAATFGLILPGSLKWRARNVALGSVLGAAFCFPLGWLHLKLVEKANE--ETLAYP 180
           AAGSATAATFG+ILPGSLKWRARNVALGSVLGAAFCFPLGWLHLKLVEKANE  + LAYP
Sbjct: 121 AAGSATAATFGVILPGSLKWRARNVALGSVLGAAFCFPLGWLHLKLVEKANEGNQALAYP 180

Query: 181 SAVQKGESKSGVGAAIERLEESLNK 204
           + VQKGESKSGVGAAIERL ESLNK
Sbjct: 181 NTVQKGESKSGVGAAIERLGESLNK 205

[Close]

BLAST of Sed0005243 vs. ExPASy TrEMBL
Match: A0A6J1GRB7 (uncharacterized protein LOC111456818 OS=Cucurbita moschata OX=3662 GN=LOC111456818 PE=4 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 3.4e-96
Identity = 189/205 (92.20%), Postives = 195/205 (95.12%), Query Frame = 0


Query: 1   MEAAEESEETSSTGTEKLPGTVNWGTATTIGVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60
           MEA E+SEET S  T+KLPGTVNWGTATTI VFAGMFYGGSKEAAASVSKDAEVTLKLGS
Sbjct: 1   MEATEKSEETVSNVTKKLPGTVNWGTATTIAVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60

Query: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTATFCGIQNLLAEKRGVHDVFNVA 120
           TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTA F G+QNLLAEKRGVHDVFNVA
Sbjct: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVA 120

Query: 121 AAGSATAATFGLILPGSLKWRARNVALGSVLGAAFCFPLGWLHLKLVEKANE--ETLAYP 180
           AAGSATAATFGLILPGSLKWRARNVA+G+VLGAAFCFPLGWLHLKLVEKANE  E LAYP
Sbjct: 121 AAGSATAATFGLILPGSLKWRARNVAMGAVLGAAFCFPLGWLHLKLVEKANEGNEALAYP 180

Query: 181 SAVQKGESKSGVGAAIERLEESLNK 204
           SA+QKGESKSGVGAAIERLEESLNK
Sbjct: 181 SAIQKGESKSGVGAAIERLEESLNK 205

[Close]

BLAST of Sed0005243 vs. ExPASy TrEMBL
Match: A0A6J1JZT3 (uncharacterized protein LOC111490310 OS=Cucurbita maxima OX=3661 GN=LOC111490310 PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 7.7e-96
Identity = 188/205 (91.71%), Postives = 195/205 (95.12%), Query Frame = 0


Query: 1   MEAAEESEETSSTGTEKLPGTVNWGTATTIGVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60
           MEA E+SEET S  T+KLPGTVNWGTATTI VFAGMFYGGSKEAAASVSKDAEVTLKLGS
Sbjct: 1   MEATEKSEETVSNVTKKLPGTVNWGTATTIAVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60

Query: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTATFCGIQNLLAEKRGVHDVFNVA 120
           TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTA F G+QNLLAEKRGVHDVFNVA
Sbjct: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVA 120

Query: 121 AAGSATAATFGLILPGSLKWRARNVALGSVLGAAFCFPLGWLHLKLVEKANE--ETLAYP 180
           AAGSATAATFGLILPGSLKWRARN+A+GSVLGAAFCFPLGWLHLKLVEKANE  E LAYP
Sbjct: 121 AAGSATAATFGLILPGSLKWRARNLAMGSVLGAAFCFPLGWLHLKLVEKANEGNEALAYP 180

Query: 181 SAVQKGESKSGVGAAIERLEESLNK 204
           SA+QKGESKSGVGAAI+RLEESLNK
Sbjct: 181 SAIQKGESKSGVGAAIQRLEESLNK 205

[Close]

BLAST of Sed0005243 vs. ExPASy TrEMBL
Match: A0A0A0LR90 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G046150 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.1e-94
Identity = 185/205 (90.24%), Postives = 193/205 (94.15%), Query Frame = 0


Query: 1   MEAAEESEETSSTGTEKLPGTVNWGTATTIGVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60
           ME AEESEET ST T+KLPGTVNWGTATTIGVFAGMFYGGSKEAAASVSKDAEVTLKLGS
Sbjct: 1   MEVAEESEETPSTSTKKLPGTVNWGTATTIGVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60

Query: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTATFCGIQNLLAEKRGVHDVFNVA 120
           TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTA F G+QNLLAEKRGVHDVFNVA
Sbjct: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVA 120

Query: 121 AAGSATAATFGLILPGSLKWRARNVALGSVLGAAFCFPLGWLHLKLVEKANE--ETLAYP 180
           AAGSATAATFGLILPGSLKWRARNVA+GSVLGAAFCFPLGW+HLKLVEKANE  E L Y 
Sbjct: 121 AAGSATAATFGLILPGSLKWRARNVAMGSVLGAAFCFPLGWIHLKLVEKANEGNEALGYT 180

Query: 181 SAVQKGESKSGVGAAIERLEESLNK 204
           + VQ+G+SKSGVGAAIER EE+LNK
Sbjct: 181 NTVQEGKSKSGVGAAIERFEENLNK 205

[Close]

BLAST of Sed0005243 vs. ExPASy TrEMBL
Match: A0A5A7UKY0 (Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003720 PE=4 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 1.6e-93
Identity = 183/205 (89.27%), Postives = 191/205 (93.17%), Query Frame = 0


Query: 1   MEAAEESEETSSTGTEKLPGTVNWGTATTIGVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60
           ME AEESEET ST T+KLPGTVNWGTATTI VFAGM YGGSKEAAASVSKDAEVTLKLGS
Sbjct: 1   MEVAEESEETPSTSTKKLPGTVNWGTATTIAVFAGMLYGGSKEAAASVSKDAEVTLKLGS 60

Query: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTATFCGIQNLLAEKRGVHDVFNVA 120
           TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTA F G+QNLLAEKRGVHDVFNVA
Sbjct: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVA 120

Query: 121 AAGSATAATFGLILPGSLKWRARNVALGSVLGAAFCFPLGWLHLKLVEKANE--ETLAYP 180
           AAGSATAATFGLILPGSLKWRARNVA+GSVLGAAFCFPLGW+HLKLVEKANE  E L Y 
Sbjct: 121 AAGSATAATFGLILPGSLKWRARNVAMGSVLGAAFCFPLGWIHLKLVEKANEGNEALGYT 180

Query: 181 SAVQKGESKSGVGAAIERLEESLNK 204
           + VQKG+SKSGVGAAIER EE++NK
Sbjct: 181 NTVQKGKSKSGVGAAIERFEENMNK 205

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BLAST of Sed0005243 vs. TAIR 10
Match: AT5G63000.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 274.2 bits (700), Expect = 8.2e-74
Identity = 143/203 (70.44%), Postives = 162/203 (79.80%), Query Frame = 0


Query: 1   MEAAEESEETSSTGTEKLPGTVNWGTATTIGVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60
           MEA E+ EET    + +L G  NWGTAT +GVFAG+ YGGSKEA+ASVSKDAEV LK+GS
Sbjct: 1   MEAVEKPEETIPGNSSRLAGNPNWGTATVVGVFAGLLYGGSKEASASVSKDAEVMLKMGS 60

Query: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTATFCGIQNLLAEKRGVHDVFNVA 120
           T DKREQ+RL+RDAMEKRFIRVTRGS++GG+RLGMFTA+F  +QN LAE RGVHDVFNV 
Sbjct: 61  TQDKREQHRLMRDAMEKRFIRVTRGSLIGGMRLGMFTASFFSLQNFLAETRGVHDVFNVV 120

Query: 121 AAGSATAATFGLILPGSLKWRARNVALGSVLGAAFCFPLGWLHLKLVEKANEETLAYPSA 180
            AGSATAA FGLI+PGSL WRARNV LGSVLGA  CFPLGW+ LKL++KANE        
Sbjct: 121 GAGSATAAVFGLIMPGSLAWRARNVLLGSVLGATVCFPLGWVQLKLMKKANEGNNV--DT 180

Query: 181 VQKGESKSGVGAAIERLEESLNK 204
              GE  SGVGAAIERLE+ L K
Sbjct: 181 GHHGEVTSGVGAAIERLEQQLRK 201

The following BLAST results are available for this feature:

BLAST of Sed0005243 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022136982.1	4.2e-96	92.20	uncharacterized protein LOC111008556 [Momordica charantia]	[more]
XP_022954601.1	7.1e-96	92.20	uncharacterized protein LOC111456818 [Cucurbita moschata] >KAG7012252.1 hypothet...	[more]
XP_038893751.1	1.2e-95	91.71	uncharacterized protein LOC120082584 [Benincasa hispida]	[more]
XP_022994666.1	1.6e-95	91.71	uncharacterized protein LOC111490310 [Cucurbita maxima]	[more]
KAG6573065.1	7.9e-95	91.22	hypothetical protein SDJN03_26952, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Sed0005243 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0005243 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C6Y4	2.0e-96	92.20	uncharacterized protein LOC111008556 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]
A0A6J1GRB7	3.4e-96	92.20	uncharacterized protein LOC111456818 OS=Cucurbita moschata OX=3662 GN=LOC1114568...	[more]
A0A6J1JZT3	7.7e-96	91.71	uncharacterized protein LOC111490310 OS=Cucurbita maxima OX=3661 GN=LOC111490310...	[more]
A0A0A0LR90	1.1e-94	90.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G046150 PE=4 SV=1	[more]
A0A5A7UKY0	1.6e-93	89.27	Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal p...	[more]

BLAST of Sed0005243 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G63000.1	8.2e-74	70.44	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF02466	Tim17	coord: 25..155 e-value: 1.9E-9 score: 38.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR13002	C3ORF1 PROTEIN-RELATED	coord: 18..203

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0005243.1	Sed0005243.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion