Homology
BLAST of Sed0004950 vs. NCBI nr
Match:
XP_038886112.1 (pentatricopeptide repeat-containing protein At1g09900 [Benincasa hispida])
HSP 1 Score: 1062.8 bits (2747), Expect = 1.1e-306
Identity = 541/610 (88.69%), Postives = 563/610 (92.30%), Query Frame = 0
Query: 1 MDLTLPAKHYTDGFCLFHRHRPKNRRRQLKSKQRVSSDPNSLTL-------------SSI 60
MD+TLPAKHYTDGFCLFHR KNR R++++K RVSS+ NSL L S
Sbjct: 1 MDITLPAKHYTDGFCLFHRRPSKNRGRKVRAKGRVSSETNSLRLYVGEKGKPRFLVIPSD 60
Query: 61 RKQLNVVRAASRVDSFSSNGRLQ------HTHL-----SNGANSNNSQSFEEFENNNHLR 120
+ +VRA RVD+FSSNGRLQ HTHL S+ ++SN+SQSFEEFENNNHLR
Sbjct: 61 CSEEPLVRAVPRVDTFSSNGRLQQGEKNLHTHLNGSSSSSSSSSNHSQSFEEFENNNHLR 120
Query: 121 RLVRNGELEEGFKFLEDMIYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEESGAVP 180
RLVRNGELEEGFKFLEDM+YRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILE+SGAVP
Sbjct: 121 RLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVP 180
Query: 181 DVITYNVLISGYCKSGEIGCALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 240
DVITYNVLISGYCKSGEIG ALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ
Sbjct: 181 DVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 240
Query: 241 LQRECYPDVITYTILIEATCKESGVGQAMKFLDEMRDKGCKPDVVTYNVLINGICKEGRL 300
LQRECYPDVITYTILIEATCKESGVGQAMK LDEMRDKGCKPDVVTYNVLINGICKEGRL
Sbjct: 241 LQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 300
Query: 301 DEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNIL 360
DEAIKFLN+MPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNIL
Sbjct: 301 DEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNIL 360
Query: 361 INFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIKYLDIMVSRGC 420
INFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAI+YLDIMVSRGC
Sbjct: 361 INFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 420
Query: 421 FPDIVTYNTLLTALCKDGKVDVAVEILNQLSCKSCSPVLITYNTVIDGLSKVGKTEDAIK 480
+PDIVTYNTLLTALCKDGKVDVAVEILNQL K CSPVLITYNTVIDGLSKVGKTEDAIK
Sbjct: 421 YPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTEDAIK 480
Query: 481 LLEEMKVKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLC 540
LL+EMK KGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLC
Sbjct: 481 LLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLC 540
Query: 541 KVRQTSRAIDFLAYMVARGCKPTEASYMILVEGLAYEGLAKEALELLNELCSRGVVKKSS 587
KVRQT RAIDFLAYMVA+GCKPTEASYMIL+EGLAYEGLAKEALELLNELCSRGVVKKSS
Sbjct: 541 KVRQTVRAIDFLAYMVAKGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVVKKSS 600
BLAST of Sed0004950 vs. NCBI nr
Match:
XP_022132179.1 (pentatricopeptide repeat-containing protein At1g09900 [Momordica charantia])
HSP 1 Score: 1050.0 bits (2714), Expect = 7.3e-303
Identity = 539/623 (86.52%), Postives = 563/623 (90.37%), Query Frame = 0
Query: 1 MDLTLPAKHYTDGFCLFHRHRPKNRRRQLKSKQRVSSDPNSLTL---------------- 60
MD+TLPAKHYTDGFCLF R +NR R++++ RV+S+ NSL L
Sbjct: 1 MDVTLPAKHYTDGFCLFQRQSTRNRGRKVRAGGRVTSEANSLRLYVGGKGKARFLVVPPS 60
Query: 61 ----------SSIRKQLNVVRAASRVDSFSSNGRLQ------HTHLSNGAN-----SNNS 120
I KQL++VRA SRVD+FSSNGRLQ H HL NG+N SN+S
Sbjct: 61 DCSVYGEKSHDLISKQLSIVRAISRVDTFSSNGRLQHGEKNLHGHL-NGSNSSSSASNHS 120
Query: 121 QSFEEFENNNHLRRLVRNGELEEGFKFLEDMIYRGDIPDIIACTSLIRGLCKTGKTRKAT 180
QSFEEFENNNHLRRLVRNGELEEGFKF+E+M+ GDIPDIIACTSLIRGLCKTGKTRKAT
Sbjct: 121 QSFEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKAT 180
Query: 181 RVMEILEESGAVPDVITYNVLISGYCKSGEIGCALQLLDRMSVSPDVVTYNTILRTLCDS 240
RVMEILE+SGAVPDVITYNVLISGYCKSGEIG ALQLLDRMSVSPDVVTYNTILRTLCDS
Sbjct: 181 RVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDS 240
Query: 241 GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKFLDEMRDKGCKPDVVTY 300
GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMK LDEM++KGCKPDVVT+
Sbjct: 241 GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTF 300
Query: 301 NVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR 360
NVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR
Sbjct: 301 NVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR 360
Query: 361 KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR 420
KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR
Sbjct: 361 KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR 420
Query: 421 AIKYLDIMVSRGCFPDIVTYNTLLTALCKDGKVDVAVEILNQLSCKSCSPVLITYNTVID 480
AI+YLDIMVSRGC+PDIVTYNTLLTALCKDGKVDVAVEILNQLS K CSPVLITYNTVID
Sbjct: 421 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVID 480
Query: 481 GLSKVGKTEDAIKLLEEMKVKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRP 540
GLSKVGKTEDAIKLL+EMK KGLKPDIITYSSLV GLSREGKVDEAIAFFHDLEEMGVRP
Sbjct: 481 GLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVRGLSREGKVDEAIAFFHDLEEMGVRP 540
Query: 541 NAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILVEGLAYEGLAKEALELL 587
NAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMIL+EGLAYEGLAKEALELL
Sbjct: 541 NAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELL 600
BLAST of Sed0004950 vs. NCBI nr
Match:
XP_008444958.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g09900 [Cucumis melo] >KAA0065076.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1045.8 bits (2703), Expect = 1.4e-301
Identity = 532/610 (87.21%), Postives = 555/610 (90.98%), Query Frame = 0
Query: 1 MDLTLPAKHYTDGFCLFHRHRPKNRRRQLKSKQRVSSDPNSLTL-------------SSI 60
MDLTLPAKHYTDGFCLFHRH KNR R++ +K RVSS+ NSL L S
Sbjct: 1 MDLTLPAKHYTDGFCLFHRHTTKNRDRRVTAKGRVSSETNSLRLHVGEKGKHRFFVIPSY 60
Query: 61 RKQLNVVRAASRVDSFSSNGRLQ------HTHL-----SNGANSNNSQSFEEFENNNHLR 120
+VRA RVD+FSSNGRL HTHL S+ ++SN SQS EEFENNNHLR
Sbjct: 61 GSDEQLVRAVPRVDTFSSNGRLPHGEKNLHTHLNGSSSSSSSSSNYSQSSEEFENNNHLR 120
Query: 121 RLVRNGELEEGFKFLEDMIYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEESGAVP 180
RLVRNGELEEGFKFLEDM+YRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILE+SGAVP
Sbjct: 121 RLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVP 180
Query: 181 DVITYNVLISGYCKSGEIGCALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 240
DVITYNVLISGYCKSGEIG ALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ
Sbjct: 181 DVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 240
Query: 241 LQRECYPDVITYTILIEATCKESGVGQAMKFLDEMRDKGCKPDVVTYNVLINGICKEGRL 300
LQRECYPDVITYTILIEATCKESGVGQAMK LDEMRDKGCKPDVVTYNVLINGICKEGRL
Sbjct: 241 LQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 300
Query: 301 DEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNIL 360
DEAIKFLN+MPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEM+RKGCSPSVVTFNIL
Sbjct: 301 DEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMIRKGCSPSVVTFNIL 360
Query: 361 INFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIKYLDIMVSRGC 420
INFLCRKGL+GRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAI+YLDIMVSRGC
Sbjct: 361 INFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 420
Query: 421 FPDIVTYNTLLTALCKDGKVDVAVEILNQLSCKSCSPVLITYNTVIDGLSKVGKTEDAIK 480
+PDIVTYNTLLTALCKDGKVD+AVEILNQL K CSPVLITYNTVIDGLSKVGKT DAIK
Sbjct: 421 YPDIVTYNTLLTALCKDGKVDIAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTGDAIK 480
Query: 481 LLEEMKVKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLC 540
LL+EMK KGLKPDIITYS+LVGGLSREGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLC
Sbjct: 481 LLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLC 540
Query: 541 KVRQTSRAIDFLAYMVARGCKPTEASYMILVEGLAYEGLAKEALELLNELCSRGVVKKSS 587
K RQT RAIDFLAYMVARGCKPTEASYMIL+EGLAYEGL KEALELL+EL SRGVV+KSS
Sbjct: 541 KARQTVRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLTKEALELLDELYSRGVVRKSS 600
BLAST of Sed0004950 vs. NCBI nr
Match:
XP_011649703.1 (pentatricopeptide repeat-containing protein At1g09900 [Cucumis sativus] >KAE8652149.1 hypothetical protein Csa_022252 [Cucumis sativus])
HSP 1 Score: 1033.9 bits (2672), Expect = 5.4e-298
Identity = 523/608 (86.02%), Postives = 553/608 (90.95%), Query Frame = 0
Query: 1 MDLTLPAKHYTDGFCLFHRHRPKNRRRQLKSKQRVSSDPNSLTLSSIRK----------- 60
MDLTLPAKHYTDGFCLFHRH KNR R++ +K RVSS+ NSL L + K
Sbjct: 1 MDLTLPAKHYTDGFCLFHRHTAKNRDRRVMAKGRVSSETNSLRLHAGEKGRFFVIPSYGS 60
Query: 61 QLNVVRAASRVDSFSSNGRLQ------HTHL-----SNGANSNNSQSFEEFENNNHLRRL 120
+ +VRA RVD+FSSNGRL HTHL S+ + SN+SQS EE ENNNHLRRL
Sbjct: 61 EEQLVRAVPRVDTFSSNGRLSHGEKNLHTHLNGSSSSSSSYSNHSQSSEEVENNNHLRRL 120
Query: 121 VRNGELEEGFKFLEDMIYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEESGAVPDV 180
VRNGELEEGFKFLEDM+ RGDIPDIIACTSLIRGLCKTGKT KATRVMEILE+SGAVPDV
Sbjct: 121 VRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDV 180
Query: 181 ITYNVLISGYCKSGEIGCALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQ 240
ITYNVLISGYCK+GEIG ALQLLDRMSVSPDVVTYNTILRTLCDSGKLK+AMEVLDRQ+Q
Sbjct: 181 ITYNVLISGYCKTGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQ 240
Query: 241 RECYPDVITYTILIEATCKESGVGQAMKFLDEMRDKGCKPDVVTYNVLINGICKEGRLDE 300
RECYPDVITYTILIEATCKESGVGQAMK LDEMRDKGCKPDVVTYNVLINGICKEGRLDE
Sbjct: 241 RECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDE 300
Query: 301 AIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNILIN 360
AI+FLN+MPSYGCQPNVITHNIILRSMCSTGRWMDAEK LAEM+RKGCSPSVVTFNILIN
Sbjct: 301 AIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILIN 360
Query: 361 FLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIKYLDIMVSRGCFP 420
FLCRKGL+GRAIDVLEKMPQHGCTPNSLSYNPLLH CK+KKM+RAI+YLDIMVSRGC+P
Sbjct: 361 FLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYP 420
Query: 421 DIVTYNTLLTALCKDGKVDVAVEILNQLSCKSCSPVLITYNTVIDGLSKVGKTEDAIKLL 480
DIVTYNTLLTALCKDGKVDVAVEILNQL K CSPVLITYNTVIDGLSKVGKT+DAIKLL
Sbjct: 421 DIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLL 480
Query: 481 EEMKVKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLCKV 540
+EMK KGLKPDIITYS+LVGGLSREGKVDEAIAFFHDLEEMGV+PNAITYNSIMLGLCK
Sbjct: 481 DEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKA 540
Query: 541 RQTSRAIDFLAYMVARGCKPTEASYMILVEGLAYEGLAKEALELLNELCSRGVVKKSSAE 587
RQT RAIDFLAYMVARGCKPTE SYMIL+EGLAYEGLAKEALELLNELCSRGVVKKSSAE
Sbjct: 541 RQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAE 600
BLAST of Sed0004950 vs. NCBI nr
Match:
XP_023546483.1 (pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita pepo subsp. pepo] >XP_023546485.1 pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita pepo subsp. pepo] >XP_023546486.1 pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita pepo subsp. pepo] >XP_023546487.1 pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 978.8 bits (2529), Expect = 2.1e-281
Identity = 495/603 (82.09%), Postives = 533/603 (88.39%), Query Frame = 0
Query: 1 MDLTLPAKHYTDGFCLFHRHRPKNRRRQLKSKQRVSSDPNS-------------LTLSSI 60
MD+TL AKHYTDGFCLF R KNR R++++++R + + NS L + S
Sbjct: 1 MDITLHAKHYTDGFCLFQRRSTKNRGRKVRAERRATPEINSVSFFVGGKGKPRFLVIPSD 60
Query: 61 RKQLNVVRAASRVDSFSSNGRLQHTHL----SNGANSNNSQSFEEFENNNHLRRLVRNGE 120
+ + VRA + S L HTHL S+ +SN+SQSFEEFENNNHLRRLVRNGE
Sbjct: 61 CSEESFVRAVLKNPSQQGEKNL-HTHLNGSSSSSFSSNHSQSFEEFENNNHLRRLVRNGE 120
Query: 121 LEEGFKFLEDMIYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEESGAVPDVITYNV 180
LEEGFKF+E M+YRGDIPD I CTSLIRGLCKTGKTRKA RVMEILE+SGAVPDVITYNV
Sbjct: 121 LEEGFKFIEGMVYRGDIPDAIVCTSLIRGLCKTGKTRKAARVMEILEDSGAVPDVITYNV 180
Query: 181 LISGYCKSGEIGCALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQRECYP 240
LISGYCKSGEI AL+LLDRMS+SPDV+TYN ILRTLCDSGKLK+AMEVL RQLQRECYP
Sbjct: 181 LISGYCKSGEIDNALKLLDRMSISPDVITYNIILRTLCDSGKLKEAMEVLHRQLQRECYP 240
Query: 241 DVITYTILIEATCKESGVGQAMKFLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIKFL 300
DVITYTILIEATCKESGVGQAMK LDEMR+KGCKPDVVTYNVLINGICKEGRLDEAI+FL
Sbjct: 241 DVITYTILIEATCKESGVGQAMKLLDEMREKGCKPDVVTYNVLINGICKEGRLDEAIEFL 300
Query: 301 NNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNILINFLCRK 360
N M SYGCQPNVITHNIILRSMCSTGRW DAEKLLAEMVRKGCSPSVVTFNILINFLCRK
Sbjct: 301 NEMSSYGCQPNVITHNIILRSMCSTGRWTDAEKLLAEMVRKGCSPSVVTFNILINFLCRK 360
Query: 361 GLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIKYLDIMVSRGCFPDIVTY 420
GLLGRAID+LEKMPQHGCTPNS SYNPLLHGFCKEKKM+RAI+YLDIM SRGC+PDIVTY
Sbjct: 361 GLLGRAIDILEKMPQHGCTPNSSSYNPLLHGFCKEKKMERAIEYLDIMASRGCYPDIVTY 420
Query: 421 NTLLTALCKDGKVDVAVEILNQLSCKSCSPVLITYNTVIDGLSKVGKTEDAIKLLEEMKV 480
NTLLTALCKDGKVDVAVEILNQL K CSPVLITYNTVIDGLSK GKTEDA+KLL+EMK
Sbjct: 421 NTLLTALCKDGKVDVAVEILNQLGTKGCSPVLITYNTVIDGLSKAGKTEDAVKLLDEMKE 480
Query: 481 KGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLCKVRQTSR 540
KGLKPDIITYSSLVGGL REGKVDEAIAFFHDLEE+GVRPN ITYNSIMLGLCKV+QT R
Sbjct: 481 KGLKPDIITYSSLVGGLCREGKVDEAIAFFHDLEEVGVRPNVITYNSIMLGLCKVQQTVR 540
Query: 541 AIDFLAYMVARGCKPTEASYMILVEGLAYEGLAKEALELLNELCSRGVVKKSSAEQVVVK 587
AIDFLA MVARGCKP EASYMIL+EGLAYEGLAKEALELL+ELCSRGV+KKSSAE+VV+K
Sbjct: 541 AIDFLASMVARGCKPNEASYMILIEGLAYEGLAKEALELLDELCSRGVMKKSSAERVVIK 600
BLAST of Sed0004950 vs. ExPASy Swiss-Prot
Match:
Q3EDF8 (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1)
HSP 1 Score: 878.6 bits (2269), Expect = 3.8e-254
Identity = 444/597 (74.37%), Postives = 504/597 (84.42%), Query Frame = 0
Query: 1 MDLTLPAKHYTDGFCLFHR-HRPKNRRRQLKSKQRVSSDPNS-LTLSS-IRKQLNVVRAA 60
MDL + +GFCL + HR R +L R S +S + L S R +L +V AA
Sbjct: 1 MDLMVSTSSAQEGFCLIQQFHREYKRGNKLDVSCRTSGSISSKIPLGSRKRNRLVLVSAA 60
Query: 61 SRVDSFSSNGRLQHTHL-------SNG----ANSNNSQSFEEFENNNHLRRLVRNGELEE 120
S+V+S NGR Q SNG ++ N+S + E+ E+NNHLR++VR GELEE
Sbjct: 61 SKVESSGLNGRAQKFETLSSGYSNSNGNGHYSSVNSSFALEDVESNNHLRQMVRTGELEE 120
Query: 121 GFKFLEDMIYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEESGAVPDVITYNVLIS 180
GFKFLE+M+Y G++PDII CT+LIRG C+ GKTRKA +++EILE SGAVPDVITYNV+IS
Sbjct: 121 GFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMIS 180
Query: 181 GYCKSGEIGCALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQRECYPDVI 240
GYCK+GEI AL +LDRMSVSPDVVTYNTILR+LCDSGKLKQAMEVLDR LQR+CYPDVI
Sbjct: 181 GYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVI 240
Query: 241 TYTILIEATCKESGVGQAMKFLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNM 300
TYTILIEATC++SGVG AMK LDEMRD+GC PDVVTYNVL+NGICKEGRLDEAIKFLN+M
Sbjct: 241 TYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM 300
Query: 301 PSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNILINFLCRKGLL 360
PS GCQPNVITHNIILRSMCSTGRWMDAEKLLA+M+RKG SPSVVTFNILINFLCRKGLL
Sbjct: 301 PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLL 360
Query: 361 GRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIKYLDIMVSRGCFPDIVTYNTL 420
GRAID+LEKMPQHGC PNSLSYNPLLHGFCKEKKMDRAI+YL+ MVSRGC+PDIVTYNT+
Sbjct: 361 GRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTM 420
Query: 421 LTALCKDGKVDVAVEILNQLSCKSCSPVLITYNTVIDGLSKVGKTEDAIKLLEEMKVKGL 480
LTALCKDGKV+ AVEILNQLS K CSPVLITYNTVIDGL+K GKT AIKLL+EM+ K L
Sbjct: 421 LTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDL 480
Query: 481 KPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLCKVRQTSRAID 540
KPD ITYSSLVGGLSREGKVDEAI FFH+ E MG+RPNA+T+NSIMLGLCK RQT RAID
Sbjct: 481 KPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAID 540
Query: 541 FLAYMVARGCKPTEASYMILVEGLAYEGLAKEALELLNELCSRGVVKKSSAEQVVVK 584
FL +M+ RGCKP E SY IL+EGLAYEG+AKEALELLNELC++G++KKSSAEQV K
Sbjct: 541 FLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQVAGK 597
BLAST of Sed0004950 vs. ExPASy Swiss-Prot
Match:
Q9SR00 (Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g04760 PE=2 SV=1)
HSP 1 Score: 441.0 bits (1133), Expect = 2.0e-122
Identity = 236/567 (41.62%), Postives = 344/567 (60.67%), Query Frame = 0
Query: 30 KSKQRVSSDPNSLTLSSIRKQLNVVRAASRVD----SFSSNG--RLQHTHLSNGA----- 89
K+++ S+ + L LS R L ++ + SFSS+G LQ T ++
Sbjct: 18 KTQKPYSNSSHGLLLSHNRSSLLTFSNSNPNNDNGRSFSSSGARNLQTTTTTDATLPTER 77
Query: 90 NSNNSQS--FEEFENNNHLRRLVRNGELEEGFKFLEDMIYRGDIPDIIACTSLIRGLCKT 149
+SQS F + + R R+G E LE M+ +G PD+I CT LI+G
Sbjct: 78 RQQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTL 137
Query: 150 GKTRKATRVMEILEESGAVPDVITYNVLISGYCKSGEIGCALQLLDRM---SVSPDVVTY 209
KA RVMEILE+ G PDV YN LI+G+CK I A ++LDRM SPD VTY
Sbjct: 138 RNIPKAVRVMEILEKFGQ-PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTY 197
Query: 210 NTILRTLCDSGKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKFLDEMRD 269
N ++ +LC GKL A++VL++ L C P VITYTILIEAT E GV +A+K +DEM
Sbjct: 198 NIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLS 257
Query: 270 KGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMD 329
+G KPD+ TYN +I G+CKEG +D A + + N+ GC+P+VI++NI+LR++ + G+W +
Sbjct: 258 RGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEE 317
Query: 330 AEKLLAEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLH 389
EKL+ +M + C P+VVT++ILI LCR G + A+++L+ M + G TP++ SY+PL+
Sbjct: 318 GEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIA 377
Query: 390 GFCKEKKMDRAIKYLDIMVSRGCFPDIVTYNTLLTALCKDGKVDVAVEILNQLSCKSCSP 449
FC+E ++D AI++L+ M+S GC PDIV YNT+L LCK+GK D A+EI +L CSP
Sbjct: 378 AFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSP 437
Query: 450 VLITYNTVIDGLSKVGKTEDAIKLLEEMKVKGLKPDIITYSSLVGGLSREGKVDEAIAFF 509
+YNT+ L G A+ ++ EM G+ PD ITY+S++ L REG VDEA
Sbjct: 438 NSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELL 497
Query: 510 HDLEEMGVRPNAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILVEGLAYE 569
D+ P+ +TYN ++LG CK + AI+ L MV GC+P E +Y +L+EG+ +
Sbjct: 498 VDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFA 557
Query: 570 GLAKEALELLNELCSRGVVKKSSAEQV 581
G EA+EL N+L + + S +++
Sbjct: 558 GYRAEAMELANDLVRIDAISEYSFKRL 583
BLAST of Sed0004950 vs. ExPASy Swiss-Prot
Match:
A3KPF8 (Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g79080 PE=2 SV=1)
HSP 1 Score: 345.1 bits (884), Expect = 1.5e-93
Identity = 201/554 (36.28%), Postives = 315/554 (56.86%), Query Frame = 0
Query: 42 LTLSSIRKQLNVVRAASRV------DSFSSNGRLQHTHLSNGANSNNSQSFEEFENNNHL 101
L SS+ K + V A++++ +F+ G L +G+ S++ +S E
Sbjct: 33 LHFSSVSKGVARVLASTQITLSPKDSAFTITGSSWKPDLDSGSFSDDPRSDEP------- 92
Query: 102 RRLVRNGELEEGFKFLEDMIYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEESGAV 161
L + F LE ++ G P++ T L+ LCK + +KA RV+E++ SG +
Sbjct: 93 -------NLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGII 152
Query: 162 PDVITYNVLISGYCKSGEIGCALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKQAMEV 221
PD Y L++ CK G +G A+QL+++M + VTYN ++R LC G L Q+++
Sbjct: 153 PDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQF 212
Query: 222 LDRQLQRECYPDVITYTILIEATCKESGVGQAMKFLDEMRDKGCKPDVVTYNVLINGICK 281
++R +Q+ P+ TY+ L+EA KE G +A+K LDE+ KG +P++V+YNVL+ G CK
Sbjct: 213 VERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCK 272
Query: 282 EGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVT 341
EGR D+A+ +P+ G + NV+++NI+LR +C GRW +A LLAEM +PSVVT
Sbjct: 273 EGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVT 332
Query: 342 FNILINFLCRKGLLGRAIDVLEKMPQ--HGCTPNSLSYNPLLHGFCKEKKMDRAIKYLDI 401
+NILIN L G +A+ VL++M + H + SYNP++ CKE K+D +K LD
Sbjct: 333 YNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDE 392
Query: 402 MVSRGCFPDIVTYNTLLTALCKDGKVDVAVEILNQLSCKSCSPVLITYNTVIDGLSKVGK 461
M+ R C P+ TYN + + + KV A I+ LS K Y +VI L + G
Sbjct: 393 MIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGN 452
Query: 462 TEDAIKLLEEMKVKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEM-GVRPNAITYN 521
T A +LL EM G PD TYS+L+ GL EG A+ +EE +P +N
Sbjct: 453 TFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFN 512
Query: 522 SIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILVEGLAYEGLAKEALELLNELCSR 581
+++LGLCK+R+T A++ MV + P E +Y ILVEG+A+E + A E+L+EL R
Sbjct: 513 AMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLR 572
Query: 582 GVVKKSSAEQVVVK 584
V+ +++ +++V++
Sbjct: 573 KVIGQNAVDRIVMQ 572
BLAST of Sed0004950 vs. ExPASy Swiss-Prot
Match:
Q9FRS4 (Pentatricopeptide repeat-containing protein At1g08610 OS=Arabidopsis thaliana OX=3702 GN=At1g08610 PE=2 SV=1)
HSP 1 Score: 340.5 bits (872), Expect = 3.8e-92
Identity = 183/483 (37.89%), Postives = 271/483 (56.11%), Query Frame = 0
Query: 87 EEFENNNHLRRLVRNGELEEGFKFLEDMIYRGDIPDIIACTSLIRGLCKTGKTRKATRVM 146
+E NN L L NG+L + K +E M +P +C++L+RGL + + KA ++
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 147 EILEESGAVPDVITYNVLISGYCKSGEIGCALQLLDRMSVS---PDVVTYNTILRTLCDS 206
++ SG VPD ITYN++I CK G I AL LL+ MS+S PDV+TYNT++R + D
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222
Query: 207 GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKFLDEMRDKGCKPDVVTY 266
G +QA+ QLQ C P +ITYT+L+E C+ G +A++ L++M +GC PD+VTY
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTY 282
Query: 267 NVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR 326
N L+N C+ G L+E + ++ S+G + N +T+N +L S+CS W + E++L M +
Sbjct: 283 NSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQ 342
Query: 327 KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR 386
P+V+T+NILIN LC+ LL RAID +
Sbjct: 343 TSYCPTVITYNILINGLCKARLLSRAIDFFYQ---------------------------- 402
Query: 387 AIKYLDIMVSRGCFPDIVTYNTLLTALCKDGKVDVAVEILNQLSCKSCSPVLITYNTVID 446
M+ + C PDIVTYNT+L A+ K+G VD A+E+L L C P LITYN+VID
Sbjct: 403 -------MLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVID 462
Query: 447 GLSKVGKTEDAIKLLEEMKVKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRP 506
GL+K G + A++L +M G+ PD IT SL+ G R V+EA + G
Sbjct: 463 GLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGI 522
Query: 507 NAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILVEGLAYEGLAKEALELL 566
TY ++ GLCK ++ AI+ + M+ GCKP E Y +V+G+ G+ EA++L
Sbjct: 523 RGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEAVQLQ 550
BLAST of Sed0004950 vs. ExPASy Swiss-Prot
Match:
Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)
HSP 1 Score: 325.1 bits (832), Expect = 1.6e-87
Identity = 163/488 (33.40%), Postives = 275/488 (56.35%), Query Frame = 0
Query: 99 VRNGELEEGFKFLEDMIYRGDIPDIIACTSLIRGLCKTGKTRKATR-VMEILEESGAVPD 158
+ G+L+ + E M+ G ++ ++ G CK G+ A + E+ + G PD
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294
Query: 159 VITYNVLISGYCKSGEIGCALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKQAMEVLD 218
T+N L++G CK+G + A++++D M PDV TYN+++ LC G++K+A+EVLD
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 354
Query: 219 RQLQRECYPDVITYTILIEATCKESGVGQAMKFLDEMRDKGCKPDVVTYNVLINGICKEG 278
+ + R+C P+ +TY LI CKE+ V +A + + KG PDV T+N LI G+C
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
Query: 279 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFN 338
A++ M S GC+P+ T+N+++ S+CS G+ +A +L +M GC+ SV+T+N
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474
Query: 339 ILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIKYLDIMVSR 398
LI+ C+ A ++ ++M HG + NS++YN L+ G CK ++++ A + +D M+
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME 534
Query: 399 GCFPDIVTYNTLLTALCKDGKVDVAVEILNQLSCKSCSPVLITYNTVIDGLSKVGKTEDA 458
G PD TYN+LLT C+ G + A +I+ ++ C P ++TY T+I GL K G+ E A
Sbjct: 535 GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594
Query: 459 IKLLEEMKVKGLKPDIITYSSLVGGLSREGKVDEAIAFFHD-LEEMGVRPNAITYNSIML 518
KLL +++KG+ Y+ ++ GL R+ K EAI F + LE+ P+A++Y +
Sbjct: 595 SKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFR 654
Query: 519 GLCKVRQTSR-AIDFLAYMVARGCKPTEASYMILVEGLAYEGLAKEALELLNELCSRGVV 578
GLC R A+DFL ++ +G P +S +L EGL + + ++L+N + +
Sbjct: 655 GLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARF 714
Query: 579 KKSSAEQV 581
+ V
Sbjct: 715 SEEEVSMV 722
BLAST of Sed0004950 vs. ExPASy TrEMBL
Match:
A0A6J1BSC2 (pentatricopeptide repeat-containing protein At1g09900 OS=Momordica charantia OX=3673 GN=LOC111005101 PE=4 SV=1)
HSP 1 Score: 1050.0 bits (2714), Expect = 3.6e-303
Identity = 539/623 (86.52%), Postives = 563/623 (90.37%), Query Frame = 0
Query: 1 MDLTLPAKHYTDGFCLFHRHRPKNRRRQLKSKQRVSSDPNSLTL---------------- 60
MD+TLPAKHYTDGFCLF R +NR R++++ RV+S+ NSL L
Sbjct: 1 MDVTLPAKHYTDGFCLFQRQSTRNRGRKVRAGGRVTSEANSLRLYVGGKGKARFLVVPPS 60
Query: 61 ----------SSIRKQLNVVRAASRVDSFSSNGRLQ------HTHLSNGAN-----SNNS 120
I KQL++VRA SRVD+FSSNGRLQ H HL NG+N SN+S
Sbjct: 61 DCSVYGEKSHDLISKQLSIVRAISRVDTFSSNGRLQHGEKNLHGHL-NGSNSSSSASNHS 120
Query: 121 QSFEEFENNNHLRRLVRNGELEEGFKFLEDMIYRGDIPDIIACTSLIRGLCKTGKTRKAT 180
QSFEEFENNNHLRRLVRNGELEEGFKF+E+M+ GDIPDIIACTSLIRGLCKTGKTRKAT
Sbjct: 121 QSFEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKAT 180
Query: 181 RVMEILEESGAVPDVITYNVLISGYCKSGEIGCALQLLDRMSVSPDVVTYNTILRTLCDS 240
RVMEILE+SGAVPDVITYNVLISGYCKSGEIG ALQLLDRMSVSPDVVTYNTILRTLCDS
Sbjct: 181 RVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDS 240
Query: 241 GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKFLDEMRDKGCKPDVVTY 300
GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMK LDEM++KGCKPDVVT+
Sbjct: 241 GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTF 300
Query: 301 NVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR 360
NVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR
Sbjct: 301 NVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR 360
Query: 361 KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR 420
KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR
Sbjct: 361 KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR 420
Query: 421 AIKYLDIMVSRGCFPDIVTYNTLLTALCKDGKVDVAVEILNQLSCKSCSPVLITYNTVID 480
AI+YLDIMVSRGC+PDIVTYNTLLTALCKDGKVDVAVEILNQLS K CSPVLITYNTVID
Sbjct: 421 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVID 480
Query: 481 GLSKVGKTEDAIKLLEEMKVKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRP 540
GLSKVGKTEDAIKLL+EMK KGLKPDIITYSSLV GLSREGKVDEAIAFFHDLEEMGVRP
Sbjct: 481 GLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVRGLSREGKVDEAIAFFHDLEEMGVRP 540
Query: 541 NAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILVEGLAYEGLAKEALELL 587
NAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMIL+EGLAYEGLAKEALELL
Sbjct: 541 NAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELL 600
BLAST of Sed0004950 vs. ExPASy TrEMBL
Match:
A0A5A7VFH1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004060 PE=4 SV=1)
HSP 1 Score: 1045.8 bits (2703), Expect = 6.7e-302
Identity = 532/610 (87.21%), Postives = 555/610 (90.98%), Query Frame = 0
Query: 1 MDLTLPAKHYTDGFCLFHRHRPKNRRRQLKSKQRVSSDPNSLTL-------------SSI 60
MDLTLPAKHYTDGFCLFHRH KNR R++ +K RVSS+ NSL L S
Sbjct: 1 MDLTLPAKHYTDGFCLFHRHTTKNRDRRVTAKGRVSSETNSLRLHVGEKGKHRFFVIPSY 60
Query: 61 RKQLNVVRAASRVDSFSSNGRLQ------HTHL-----SNGANSNNSQSFEEFENNNHLR 120
+VRA RVD+FSSNGRL HTHL S+ ++SN SQS EEFENNNHLR
Sbjct: 61 GSDEQLVRAVPRVDTFSSNGRLPHGEKNLHTHLNGSSSSSSSSSNYSQSSEEFENNNHLR 120
Query: 121 RLVRNGELEEGFKFLEDMIYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEESGAVP 180
RLVRNGELEEGFKFLEDM+YRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILE+SGAVP
Sbjct: 121 RLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVP 180
Query: 181 DVITYNVLISGYCKSGEIGCALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 240
DVITYNVLISGYCKSGEIG ALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ
Sbjct: 181 DVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 240
Query: 241 LQRECYPDVITYTILIEATCKESGVGQAMKFLDEMRDKGCKPDVVTYNVLINGICKEGRL 300
LQRECYPDVITYTILIEATCKESGVGQAMK LDEMRDKGCKPDVVTYNVLINGICKEGRL
Sbjct: 241 LQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 300
Query: 301 DEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNIL 360
DEAIKFLN+MPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEM+RKGCSPSVVTFNIL
Sbjct: 301 DEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMIRKGCSPSVVTFNIL 360
Query: 361 INFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIKYLDIMVSRGC 420
INFLCRKGL+GRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAI+YLDIMVSRGC
Sbjct: 361 INFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 420
Query: 421 FPDIVTYNTLLTALCKDGKVDVAVEILNQLSCKSCSPVLITYNTVIDGLSKVGKTEDAIK 480
+PDIVTYNTLLTALCKDGKVD+AVEILNQL K CSPVLITYNTVIDGLSKVGKT DAIK
Sbjct: 421 YPDIVTYNTLLTALCKDGKVDIAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTGDAIK 480
Query: 481 LLEEMKVKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLC 540
LL+EMK KGLKPDIITYS+LVGGLSREGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLC
Sbjct: 481 LLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLC 540
Query: 541 KVRQTSRAIDFLAYMVARGCKPTEASYMILVEGLAYEGLAKEALELLNELCSRGVVKKSS 587
K RQT RAIDFLAYMVARGCKPTEASYMIL+EGLAYEGL KEALELL+EL SRGVV+KSS
Sbjct: 541 KARQTVRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLTKEALELLDELYSRGVVRKSS 600
BLAST of Sed0004950 vs. ExPASy TrEMBL
Match:
A0A1S3BB35 (pentatricopeptide repeat-containing protein At1g09900 OS=Cucumis melo OX=3656 GN=LOC103488143 PE=4 SV=1)
HSP 1 Score: 1045.8 bits (2703), Expect = 6.7e-302
Identity = 532/610 (87.21%), Postives = 555/610 (90.98%), Query Frame = 0
Query: 1 MDLTLPAKHYTDGFCLFHRHRPKNRRRQLKSKQRVSSDPNSLTL-------------SSI 60
MDLTLPAKHYTDGFCLFHRH KNR R++ +K RVSS+ NSL L S
Sbjct: 1 MDLTLPAKHYTDGFCLFHRHTTKNRDRRVTAKGRVSSETNSLRLHVGEKGKHRFFVIPSY 60
Query: 61 RKQLNVVRAASRVDSFSSNGRLQ------HTHL-----SNGANSNNSQSFEEFENNNHLR 120
+VRA RVD+FSSNGRL HTHL S+ ++SN SQS EEFENNNHLR
Sbjct: 61 GSDEQLVRAVPRVDTFSSNGRLPHGEKNLHTHLNGSSSSSSSSSNYSQSSEEFENNNHLR 120
Query: 121 RLVRNGELEEGFKFLEDMIYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEESGAVP 180
RLVRNGELEEGFKFLEDM+YRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILE+SGAVP
Sbjct: 121 RLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVP 180
Query: 181 DVITYNVLISGYCKSGEIGCALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 240
DVITYNVLISGYCKSGEIG ALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ
Sbjct: 181 DVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 240
Query: 241 LQRECYPDVITYTILIEATCKESGVGQAMKFLDEMRDKGCKPDVVTYNVLINGICKEGRL 300
LQRECYPDVITYTILIEATCKESGVGQAMK LDEMRDKGCKPDVVTYNVLINGICKEGRL
Sbjct: 241 LQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 300
Query: 301 DEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNIL 360
DEAIKFLN+MPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEM+RKGCSPSVVTFNIL
Sbjct: 301 DEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMIRKGCSPSVVTFNIL 360
Query: 361 INFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIKYLDIMVSRGC 420
INFLCRKGL+GRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAI+YLDIMVSRGC
Sbjct: 361 INFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 420
Query: 421 FPDIVTYNTLLTALCKDGKVDVAVEILNQLSCKSCSPVLITYNTVIDGLSKVGKTEDAIK 480
+PDIVTYNTLLTALCKDGKVD+AVEILNQL K CSPVLITYNTVIDGLSKVGKT DAIK
Sbjct: 421 YPDIVTYNTLLTALCKDGKVDIAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTGDAIK 480
Query: 481 LLEEMKVKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLC 540
LL+EMK KGLKPDIITYS+LVGGLSREGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLC
Sbjct: 481 LLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLC 540
Query: 541 KVRQTSRAIDFLAYMVARGCKPTEASYMILVEGLAYEGLAKEALELLNELCSRGVVKKSS 587
K RQT RAIDFLAYMVARGCKPTEASYMIL+EGLAYEGL KEALELL+EL SRGVV+KSS
Sbjct: 541 KARQTVRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLTKEALELLDELYSRGVVRKSS 600
BLAST of Sed0004950 vs. ExPASy TrEMBL
Match:
A0A6J1HFE3 (pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita moschata OX=3662 GN=LOC111462544 PE=4 SV=1)
HSP 1 Score: 977.6 bits (2526), Expect = 2.2e-281
Identity = 494/603 (81.92%), Postives = 532/603 (88.23%), Query Frame = 0
Query: 1 MDLTLPAKHYTDGFCLFHRHRPKNRRRQLKSKQRVSSDPNS-------------LTLSSI 60
MD+TL AKHYTDGFCLF R KNR R +++++R + + NS L + S
Sbjct: 1 MDITLHAKHYTDGFCLFQRRSTKNRGRNVRAERRATPETNSVSFFVGGKGKPRFLVVPSD 60
Query: 61 RKQLNVVRAASRVDSFSSNGRLQHTHL----SNGANSNNSQSFEEFENNNHLRRLVRNGE 120
+ + VRA + S + HTHL S+ +SN+SQSFEEFENNNHLRRLVRNGE
Sbjct: 61 CSEESFVRAVLKNPSQQGEKNV-HTHLNGSSSSSFSSNHSQSFEEFENNNHLRRLVRNGE 120
Query: 121 LEEGFKFLEDMIYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEESGAVPDVITYNV 180
LEEGFKF+E M+YRGDIPD I CTSLIRGLCKTGKTRKA RVMEILE+SGAVPDVITYNV
Sbjct: 121 LEEGFKFIEGMVYRGDIPDAIVCTSLIRGLCKTGKTRKAARVMEILEDSGAVPDVITYNV 180
Query: 181 LISGYCKSGEIGCALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQRECYP 240
LISGYCKSGEI AL+LLDRMS+SPDV+TYN ILRTLCDSGKLK+AMEVL RQLQRECYP
Sbjct: 181 LISGYCKSGEIDNALKLLDRMSISPDVITYNIILRTLCDSGKLKEAMEVLHRQLQRECYP 240
Query: 241 DVITYTILIEATCKESGVGQAMKFLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIKFL 300
DVITYTILIEATCKESGVGQAMK LDEMR+KGCKPDVVTYNVLINGICKEGRLDEAI+FL
Sbjct: 241 DVITYTILIEATCKESGVGQAMKLLDEMREKGCKPDVVTYNVLINGICKEGRLDEAIEFL 300
Query: 301 NNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNILINFLCRK 360
N M SYGCQPNVITHNIILRSMCSTGRW DAEKLLAEMVRKGCSPSVVTFNILINFLCRK
Sbjct: 301 NEMSSYGCQPNVITHNIILRSMCSTGRWTDAEKLLAEMVRKGCSPSVVTFNILINFLCRK 360
Query: 361 GLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIKYLDIMVSRGCFPDIVTY 420
GLLGRAID+LEKMPQHGCTPNS SYNPLLHGFCKEKKM+RAI+YLDIM SRGC+PDIVTY
Sbjct: 361 GLLGRAIDILEKMPQHGCTPNSSSYNPLLHGFCKEKKMERAIEYLDIMASRGCYPDIVTY 420
Query: 421 NTLLTALCKDGKVDVAVEILNQLSCKSCSPVLITYNTVIDGLSKVGKTEDAIKLLEEMKV 480
NTLLTALCKDGKVDVAVEILNQL K CSPVLITYNTVIDGLSK GKTEDA+KLL+EMK
Sbjct: 421 NTLLTALCKDGKVDVAVEILNQLGTKGCSPVLITYNTVIDGLSKAGKTEDAVKLLDEMKE 480
Query: 481 KGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLCKVRQTSR 540
KGLKPDIITYSSLVGGL REGKVDEAIAFFHDLEE+GVRPN ITYNSIMLGLCKV+QT R
Sbjct: 481 KGLKPDIITYSSLVGGLCREGKVDEAIAFFHDLEEVGVRPNVITYNSIMLGLCKVQQTVR 540
Query: 541 AIDFLAYMVARGCKPTEASYMILVEGLAYEGLAKEALELLNELCSRGVVKKSSAEQVVVK 587
AIDFLA MVARGCKP EASYMIL+EGLAYEGLAKEALELL+ELCSRGV+KKSSAE+VV+K
Sbjct: 541 AIDFLASMVARGCKPNEASYMILIEGLAYEGLAKEALELLDELCSRGVMKKSSAERVVIK 600
BLAST of Sed0004950 vs. ExPASy TrEMBL
Match:
A0A6J1K404 (pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita maxima OX=3661 GN=LOC111492114 PE=4 SV=1)
HSP 1 Score: 976.9 bits (2524), Expect = 3.8e-281
Identity = 492/603 (81.59%), Postives = 533/603 (88.39%), Query Frame = 0
Query: 1 MDLTLPAKHYTDGFCLFHRHRPKNRRRQLKSKQRVSSDPNSLTLS-------------SI 60
MD+TL AKHYTDGFCLF R KN R +++++R + + NS++ S S
Sbjct: 1 MDITLHAKHYTDGFCLFQRRSTKNSSRNVRAERRATPETNSVSFSVGGKGKPRFLVIPSD 60
Query: 61 RKQLNVVRAASRVDSFSSNGRLQHTHL----SNGANSNNSQSFEEFENNNHLRRLVRNGE 120
+ + VRA + + + HTHL S+ +SN+SQSFEEFENNNHLRRLVRNGE
Sbjct: 61 CSEESFVRAVLK-NPLQQGEKNLHTHLNGSSSSSFSSNHSQSFEEFENNNHLRRLVRNGE 120
Query: 121 LEEGFKFLEDMIYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEESGAVPDVITYNV 180
LEEGFKF+E M+YRGDIPD I CTSLIRGLCKTGKTRKA RVMEILE+SGAVPDVITYNV
Sbjct: 121 LEEGFKFIEGMVYRGDIPDAIVCTSLIRGLCKTGKTRKAARVMEILEDSGAVPDVITYNV 180
Query: 181 LISGYCKSGEIGCALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQRECYP 240
LISGYCKSGEI AL+LLDRMS+SPDV+TYN ILRTLCDSGKLK+AMEVL RQLQRECYP
Sbjct: 181 LISGYCKSGEIDNALKLLDRMSISPDVITYNIILRTLCDSGKLKEAMEVLHRQLQRECYP 240
Query: 241 DVITYTILIEATCKESGVGQAMKFLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIKFL 300
DVITYTILIEATCKESGVGQAMK LDEMR+KGCKPDVVTYNVLINGICKEGRLDEAI+FL
Sbjct: 241 DVITYTILIEATCKESGVGQAMKLLDEMREKGCKPDVVTYNVLINGICKEGRLDEAIEFL 300
Query: 301 NNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNILINFLCRK 360
N M SYGCQPNVITHNIILRSMCSTGRW DAEKLLAEMVRKGCSPSVVTFNILINFLCRK
Sbjct: 301 NEMSSYGCQPNVITHNIILRSMCSTGRWTDAEKLLAEMVRKGCSPSVVTFNILINFLCRK 360
Query: 361 GLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIKYLDIMVSRGCFPDIVTY 420
GLLGRAID+LEKMPQHGCTPNS SYNPLLHGFCKEKKM+RAI+YLDIM SRGC+PDIVTY
Sbjct: 361 GLLGRAIDILEKMPQHGCTPNSSSYNPLLHGFCKEKKMERAIEYLDIMASRGCYPDIVTY 420
Query: 421 NTLLTALCKDGKVDVAVEILNQLSCKSCSPVLITYNTVIDGLSKVGKTEDAIKLLEEMKV 480
NTLLTALCKDGKVDVAVEILNQL KSCSPVLITYNTVIDGLSK GKTEDA+KLL+EMK
Sbjct: 421 NTLLTALCKDGKVDVAVEILNQLGTKSCSPVLITYNTVIDGLSKAGKTEDAVKLLDEMKE 480
Query: 481 KGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLCKVRQTSR 540
KGLKPDIITYSSL+GGL REGKVDEAIAFFHDLEE+GVRPN ITYNSIMLGLCKV+QT R
Sbjct: 481 KGLKPDIITYSSLIGGLCREGKVDEAIAFFHDLEEVGVRPNVITYNSIMLGLCKVQQTVR 540
Query: 541 AIDFLAYMVARGCKPTEASYMILVEGLAYEGLAKEALELLNELCSRGVVKKSSAEQVVVK 587
AIDFLA MVARGCKP EASYMIL+EGLAYEGLAKEALELL+ELCSRGV+KKSSAE+VV+K
Sbjct: 541 AIDFLASMVARGCKPNEASYMILIEGLAYEGLAKEALELLDELCSRGVMKKSSAERVVIK 600
BLAST of Sed0004950 vs. TAIR 10
Match:
AT1G09900.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 878.6 bits (2269), Expect = 2.7e-255
Identity = 444/597 (74.37%), Postives = 504/597 (84.42%), Query Frame = 0
Query: 1 MDLTLPAKHYTDGFCLFHR-HRPKNRRRQLKSKQRVSSDPNS-LTLSS-IRKQLNVVRAA 60
MDL + +GFCL + HR R +L R S +S + L S R +L +V AA
Sbjct: 1 MDLMVSTSSAQEGFCLIQQFHREYKRGNKLDVSCRTSGSISSKIPLGSRKRNRLVLVSAA 60
Query: 61 SRVDSFSSNGRLQHTHL-------SNG----ANSNNSQSFEEFENNNHLRRLVRNGELEE 120
S+V+S NGR Q SNG ++ N+S + E+ E+NNHLR++VR GELEE
Sbjct: 61 SKVESSGLNGRAQKFETLSSGYSNSNGNGHYSSVNSSFALEDVESNNHLRQMVRTGELEE 120
Query: 121 GFKFLEDMIYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEESGAVPDVITYNVLIS 180
GFKFLE+M+Y G++PDII CT+LIRG C+ GKTRKA +++EILE SGAVPDVITYNV+IS
Sbjct: 121 GFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMIS 180
Query: 181 GYCKSGEIGCALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQRECYPDVI 240
GYCK+GEI AL +LDRMSVSPDVVTYNTILR+LCDSGKLKQAMEVLDR LQR+CYPDVI
Sbjct: 181 GYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVI 240
Query: 241 TYTILIEATCKESGVGQAMKFLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNM 300
TYTILIEATC++SGVG AMK LDEMRD+GC PDVVTYNVL+NGICKEGRLDEAIKFLN+M
Sbjct: 241 TYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM 300
Query: 301 PSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNILINFLCRKGLL 360
PS GCQPNVITHNIILRSMCSTGRWMDAEKLLA+M+RKG SPSVVTFNILINFLCRKGLL
Sbjct: 301 PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLL 360
Query: 361 GRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIKYLDIMVSRGCFPDIVTYNTL 420
GRAID+LEKMPQHGC PNSLSYNPLLHGFCKEKKMDRAI+YL+ MVSRGC+PDIVTYNT+
Sbjct: 361 GRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTM 420
Query: 421 LTALCKDGKVDVAVEILNQLSCKSCSPVLITYNTVIDGLSKVGKTEDAIKLLEEMKVKGL 480
LTALCKDGKV+ AVEILNQLS K CSPVLITYNTVIDGL+K GKT AIKLL+EM+ K L
Sbjct: 421 LTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDL 480
Query: 481 KPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLCKVRQTSRAID 540
KPD ITYSSLVGGLSREGKVDEAI FFH+ E MG+RPNA+T+NSIMLGLCK RQT RAID
Sbjct: 481 KPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAID 540
Query: 541 FLAYMVARGCKPTEASYMILVEGLAYEGLAKEALELLNELCSRGVVKKSSAEQVVVK 584
FL +M+ RGCKP E SY IL+EGLAYEG+AKEALELLNELC++G++KKSSAEQV K
Sbjct: 541 FLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQVAGK 597
BLAST of Sed0004950 vs. TAIR 10
Match:
AT3G04760.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 441.0 bits (1133), Expect = 1.5e-123
Identity = 236/567 (41.62%), Postives = 344/567 (60.67%), Query Frame = 0
Query: 30 KSKQRVSSDPNSLTLSSIRKQLNVVRAASRVD----SFSSNG--RLQHTHLSNGA----- 89
K+++ S+ + L LS R L ++ + SFSS+G LQ T ++
Sbjct: 18 KTQKPYSNSSHGLLLSHNRSSLLTFSNSNPNNDNGRSFSSSGARNLQTTTTTDATLPTER 77
Query: 90 NSNNSQS--FEEFENNNHLRRLVRNGELEEGFKFLEDMIYRGDIPDIIACTSLIRGLCKT 149
+SQS F + + R R+G E LE M+ +G PD+I CT LI+G
Sbjct: 78 RQQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTL 137
Query: 150 GKTRKATRVMEILEESGAVPDVITYNVLISGYCKSGEIGCALQLLDRM---SVSPDVVTY 209
KA RVMEILE+ G PDV YN LI+G+CK I A ++LDRM SPD VTY
Sbjct: 138 RNIPKAVRVMEILEKFGQ-PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTY 197
Query: 210 NTILRTLCDSGKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKFLDEMRD 269
N ++ +LC GKL A++VL++ L C P VITYTILIEAT E GV +A+K +DEM
Sbjct: 198 NIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLS 257
Query: 270 KGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMD 329
+G KPD+ TYN +I G+CKEG +D A + + N+ GC+P+VI++NI+LR++ + G+W +
Sbjct: 258 RGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEE 317
Query: 330 AEKLLAEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLH 389
EKL+ +M + C P+VVT++ILI LCR G + A+++L+ M + G TP++ SY+PL+
Sbjct: 318 GEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIA 377
Query: 390 GFCKEKKMDRAIKYLDIMVSRGCFPDIVTYNTLLTALCKDGKVDVAVEILNQLSCKSCSP 449
FC+E ++D AI++L+ M+S GC PDIV YNT+L LCK+GK D A+EI +L CSP
Sbjct: 378 AFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSP 437
Query: 450 VLITYNTVIDGLSKVGKTEDAIKLLEEMKVKGLKPDIITYSSLVGGLSREGKVDEAIAFF 509
+YNT+ L G A+ ++ EM G+ PD ITY+S++ L REG VDEA
Sbjct: 438 NSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELL 497
Query: 510 HDLEEMGVRPNAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILVEGLAYE 569
D+ P+ +TYN ++LG CK + AI+ L MV GC+P E +Y +L+EG+ +
Sbjct: 498 VDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFA 557
Query: 570 GLAKEALELLNELCSRGVVKKSSAEQV 581
G EA+EL N+L + + S +++
Sbjct: 558 GYRAEAMELANDLVRIDAISEYSFKRL 583
BLAST of Sed0004950 vs. TAIR 10
Match:
AT1G79080.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 345.1 bits (884), Expect = 1.1e-94
Identity = 201/554 (36.28%), Postives = 315/554 (56.86%), Query Frame = 0
Query: 42 LTLSSIRKQLNVVRAASRV------DSFSSNGRLQHTHLSNGANSNNSQSFEEFENNNHL 101
L SS+ K + V A++++ +F+ G L +G+ S++ +S E
Sbjct: 33 LHFSSVSKGVARVLASTQITLSPKDSAFTITGSSWKPDLDSGSFSDDPRSDEP------- 92
Query: 102 RRLVRNGELEEGFKFLEDMIYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEESGAV 161
L + F LE ++ G P++ T L+ LCK + +KA RV+E++ SG +
Sbjct: 93 -------NLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGII 152
Query: 162 PDVITYNVLISGYCKSGEIGCALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKQAMEV 221
PD Y L++ CK G +G A+QL+++M + VTYN ++R LC G L Q+++
Sbjct: 153 PDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQF 212
Query: 222 LDRQLQRECYPDVITYTILIEATCKESGVGQAMKFLDEMRDKGCKPDVVTYNVLINGICK 281
++R +Q+ P+ TY+ L+EA KE G +A+K LDE+ KG +P++V+YNVL+ G CK
Sbjct: 213 VERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCK 272
Query: 282 EGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVT 341
EGR D+A+ +P+ G + NV+++NI+LR +C GRW +A LLAEM +PSVVT
Sbjct: 273 EGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVT 332
Query: 342 FNILINFLCRKGLLGRAIDVLEKMPQ--HGCTPNSLSYNPLLHGFCKEKKMDRAIKYLDI 401
+NILIN L G +A+ VL++M + H + SYNP++ CKE K+D +K LD
Sbjct: 333 YNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDE 392
Query: 402 MVSRGCFPDIVTYNTLLTALCKDGKVDVAVEILNQLSCKSCSPVLITYNTVIDGLSKVGK 461
M+ R C P+ TYN + + + KV A I+ LS K Y +VI L + G
Sbjct: 393 MIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGN 452
Query: 462 TEDAIKLLEEMKVKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEM-GVRPNAITYN 521
T A +LL EM G PD TYS+L+ GL EG A+ +EE +P +N
Sbjct: 453 TFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFN 512
Query: 522 SIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILVEGLAYEGLAKEALELLNELCSR 581
+++LGLCK+R+T A++ MV + P E +Y ILVEG+A+E + A E+L+EL R
Sbjct: 513 AMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLR 572
Query: 582 GVVKKSSAEQVVVK 584
V+ +++ +++V++
Sbjct: 573 KVIGQNAVDRIVMQ 572
BLAST of Sed0004950 vs. TAIR 10
Match:
AT1G08610.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 340.5 bits (872), Expect = 2.7e-93
Identity = 183/483 (37.89%), Postives = 271/483 (56.11%), Query Frame = 0
Query: 87 EEFENNNHLRRLVRNGELEEGFKFLEDMIYRGDIPDIIACTSLIRGLCKTGKTRKATRVM 146
+E NN L L NG+L + K +E M +P +C++L+RGL + + KA ++
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 147 EILEESGAVPDVITYNVLISGYCKSGEIGCALQLLDRMSVS---PDVVTYNTILRTLCDS 206
++ SG VPD ITYN++I CK G I AL LL+ MS+S PDV+TYNT++R + D
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222
Query: 207 GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKFLDEMRDKGCKPDVVTY 266
G +QA+ QLQ C P +ITYT+L+E C+ G +A++ L++M +GC PD+VTY
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTY 282
Query: 267 NVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR 326
N L+N C+ G L+E + ++ S+G + N +T+N +L S+CS W + E++L M +
Sbjct: 283 NSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQ 342
Query: 327 KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR 386
P+V+T+NILIN LC+ LL RAID +
Sbjct: 343 TSYCPTVITYNILINGLCKARLLSRAIDFFYQ---------------------------- 402
Query: 387 AIKYLDIMVSRGCFPDIVTYNTLLTALCKDGKVDVAVEILNQLSCKSCSPVLITYNTVID 446
M+ + C PDIVTYNT+L A+ K+G VD A+E+L L C P LITYN+VID
Sbjct: 403 -------MLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVID 462
Query: 447 GLSKVGKTEDAIKLLEEMKVKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRP 506
GL+K G + A++L +M G+ PD IT SL+ G R V+EA + G
Sbjct: 463 GLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGI 522
Query: 507 NAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILVEGLAYEGLAKEALELL 566
TY ++ GLCK ++ AI+ + M+ GCKP E Y +V+G+ G+ EA++L
Sbjct: 523 RGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEAVQLQ 550
BLAST of Sed0004950 vs. TAIR 10
Match:
AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 325.1 bits (832), Expect = 1.2e-88
Identity = 163/488 (33.40%), Postives = 275/488 (56.35%), Query Frame = 0
Query: 99 VRNGELEEGFKFLEDMIYRGDIPDIIACTSLIRGLCKTGKTRKATR-VMEILEESGAVPD 158
+ G+L+ + E M+ G ++ ++ G CK G+ A + E+ + G PD
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294
Query: 159 VITYNVLISGYCKSGEIGCALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKQAMEVLD 218
T+N L++G CK+G + A++++D M PDV TYN+++ LC G++K+A+EVLD
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 354
Query: 219 RQLQRECYPDVITYTILIEATCKESGVGQAMKFLDEMRDKGCKPDVVTYNVLINGICKEG 278
+ + R+C P+ +TY LI CKE+ V +A + + KG PDV T+N LI G+C
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
Query: 279 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFN 338
A++ M S GC+P+ T+N+++ S+CS G+ +A +L +M GC+ SV+T+N
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474
Query: 339 ILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIKYLDIMVSR 398
LI+ C+ A ++ ++M HG + NS++YN L+ G CK ++++ A + +D M+
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME 534
Query: 399 GCFPDIVTYNTLLTALCKDGKVDVAVEILNQLSCKSCSPVLITYNTVIDGLSKVGKTEDA 458
G PD TYN+LLT C+ G + A +I+ ++ C P ++TY T+I GL K G+ E A
Sbjct: 535 GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594
Query: 459 IKLLEEMKVKGLKPDIITYSSLVGGLSREGKVDEAIAFFHD-LEEMGVRPNAITYNSIML 518
KLL +++KG+ Y+ ++ GL R+ K EAI F + LE+ P+A++Y +
Sbjct: 595 SKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFR 654
Query: 519 GLCKVRQTSR-AIDFLAYMVARGCKPTEASYMILVEGLAYEGLAKEALELLNELCSRGVV 578
GLC R A+DFL ++ +G P +S +L EGL + + ++L+N + +
Sbjct: 655 GLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARF 714
Query: 579 KKSSAEQV 581
+ V
Sbjct: 715 SEEEVSMV 722
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038886112.1 | 1.1e-306 | 88.69 | pentatricopeptide repeat-containing protein At1g09900 [Benincasa hispida] | [more] |
XP_022132179.1 | 7.3e-303 | 86.52 | pentatricopeptide repeat-containing protein At1g09900 [Momordica charantia] | [more] |
XP_008444958.1 | 1.4e-301 | 87.21 | PREDICTED: pentatricopeptide repeat-containing protein At1g09900 [Cucumis melo] ... | [more] |
XP_011649703.1 | 5.4e-298 | 86.02 | pentatricopeptide repeat-containing protein At1g09900 [Cucumis sativus] >KAE8652... | [more] |
XP_023546483.1 | 2.1e-281 | 82.09 | pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita pepo subsp... | [more] |
Match Name | E-value | Identity | Description | |
Q3EDF8 | 3.8e-254 | 74.37 | Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX... | [more] |
Q9SR00 | 2.0e-122 | 41.62 | Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidop... | [more] |
A3KPF8 | 1.5e-93 | 36.28 | Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidop... | [more] |
Q9FRS4 | 3.8e-92 | 37.89 | Pentatricopeptide repeat-containing protein At1g08610 OS=Arabidopsis thaliana OX... | [more] |
Q9LFF1 | 1.6e-87 | 33.40 | Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1BSC2 | 3.6e-303 | 86.52 | pentatricopeptide repeat-containing protein At1g09900 OS=Momordica charantia OX=... | [more] |
A0A5A7VFH1 | 6.7e-302 | 87.21 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3BB35 | 6.7e-302 | 87.21 | pentatricopeptide repeat-containing protein At1g09900 OS=Cucumis melo OX=3656 GN... | [more] |
A0A6J1HFE3 | 2.2e-281 | 81.92 | pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita moschata... | [more] |
A0A6J1K404 | 3.8e-281 | 81.59 | pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita maxima O... | [more] |
Match Name | E-value | Identity | Description | |
AT1G09900.1 | 2.7e-255 | 74.37 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT3G04760.1 | 1.5e-123 | 41.62 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT1G79080.1 | 1.1e-94 | 36.28 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G08610.1 | 2.7e-93 | 37.89 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G53700.1 | 1.2e-88 | 33.40 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |