Sed0004950 (gene) Chayote v1

Overview
NameSed0004950
Typegene
OrganismSechium edule (Chayote v1)
DescriptionPentatricopeptide repeat-containing protein
LocationLG04: 1654352 .. 1656549 (-)
RNA-Seq ExpressionSed0004950
SyntenySed0004950
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCGATTGGTCGTCTTGACCCATCCAGCAGCGCCTCTTTCACCAACCACGACCATATCCTCAGAAATCGGATAAGCAAAAACGCCGCCTCTTCACTCACCACCAACCTCCATTTTTACGCCACTCCCTGCAACTTTCCCATCTCCAAAACCCTAAAAAACCAGCCCCCATTGAACTCAAATCCATTGAAAATGGAGTTCTAAGCTCCAAAACCCCTTTGTTTCCTTCAAGTGAAAGAAGGATCATGGATCTAACATTGCCTGCAAAGCATTACACAGATGGGTTCTGTTTATTCCACCGCCACCGCCCCAAAAATCGCCGCCGGCAACTCAAATCCAAGCAAAGGGTCTCATCGGACCCCAATTCCTTAACCCTTTCTTCCATTCGTAAACAGCTCAACGTCGTTCGAGCGGCTTCCAGGGTCGATTCGTTTAGCTCCAATGGAAGATTGCAACACACCCATTTGAGCAATGGCGCCAATTCGAATAACTCGCAGAGCTTTGAGGAATTCGAGAACAACAATCATCTTCGTCGGCTCGTAAGAAATGGGGAATTGGAAGAAGGGTTTAAATTTCTTGAGGATATGATTTATCGTGGTGATATTCCTGATATAATTGCTTGTACTAGTTTGATTCGTGGGTTGTGTAAGACTGGGAAAACTAGGAAAGCTACAAGGGTTATGGAAATTTTGGAAGAATCTGGTGCTGTTCCTGATGTGATTACTTATAATGTTCTTATTAGTGGGTATTGTAAATCTGGTGAAATTGGTTGTGCTTTACAGCTTTTGGATAGAATGAGTGTTTCCCCTGATGTTGTTACATATAATACAATCTTGAGAACTTTATGTGATAGTGGGAAATTGAAACAAGCTATGGAAGTTCTTGATAGACAGTTGCAAAGAGAGTGTTATCCTGATGTAATAACTTATACTATCTTGATTGAAGCAACTTGTAAGGAAAGTGGTGTTGGACAGGCAATGAAATTTTTGGATGAAATGAGGGATAAAGGGTGTAAGCCTGATGTTGTTACTTATAATGTTCTTATCAATGGGATTTGTAAGGAAGGGAGGTTGGATGAAGCTATTAAGTTCTTGAATAATATGCCTTCCTATGGCTGCCAACCGAATGTGATAACGCATAACATCATTTTGCGTAGTATGTGTAGTACCGGACGGTGGATGGATGCCGAGAAGCTGTTGGCTGAAATGGTTCGGAAGGGGTGTTCTCCTAGTGTTGTTACTTTCAATATCTTGATTAACTTTTTGTGTCGAAAGGGCTTGCTTGGTCGAGCGATTGATGTCTTGGAGAAGATGCCGCAGCATGGGTGTACTCCGAATTCATTGAGTTATAACCCGTTGCTCCATGGATTCTGCAAAGAGAAGAAGATGGATCGGGCAATTAAGTATTTGGATATCATGGTTTCGAGAGGATGTTTCCCTGATATCGTGACCTACAATACTCTGTTGACAGCACTGTGTAAAGATGGGAAGGTAGATGTTGCAGTTGAGATACTGAATCAACTTAGTTGCAAAAGTTGTTCTCCTGTATTGATTACATACAACACAGTCATTGATGGGCTTTCAAAGGTAGGAAAAACCGAAGATGCCATTAAACTTCTAGAGGAAATGAAGGTAAAAGGACTCAAACCGGATATAATTACGTACTCCTCGCTCGTCGGGGGACTGAGTAGAGAAGGAAAAGTCGATGAAGCGATTGCATTTTTCCATGATTTAGAAGAGATGGGTGTGAGGCCAAATGCCATCACCTACAACTCTATCATGTTAGGACTCTGCAAGGTTCGACAAACCAGTCGAGCCATCGATTTCTTGGCGTACATGGTTGCCCGAGGCTGCAAACCGACCGAGGCTTCATACATGATTCTCGTTGAAGGATTGGCGTATGAAGGTTTAGCCAAGGAGGCATTGGAGTTGCTGAATGAACTGTGCTCTAGAGGGGTTGTGAAGAAGAGTTCTGCTGAGCAGGTTGTGGTCAAAAACTCTTTTTGATGTATTTTTAGTTCAGCTGTTGTTTAATGAGCCTTAGATTTCATCATTAAATCTTCTTAGATGTGGGGGTTTTGATAGTCTTGGAGCCTAATTATGTTATCATCTTTGTCAAAATGGATAGAATCCAAATCAATTTTGTAATATAAAAAATGCTCATGGGTAAGTTTTGAAGTATGCACCAGAGTTGATTGAGCA

mRNA sequence

CCGATTGGTCGTCTTGACCCATCCAGCAGCGCCTCTTTCACCAACCACGACCATATCCTCAGAAATCGGATAAGCAAAAACGCCGCCTCTTCACTCACCACCAACCTCCATTTTTACGCCACTCCCTGCAACTTTCCCATCTCCAAAACCCTAAAAAACCAGCCCCCATTGAACTCAAATCCATTGAAAATGGAGTTCTAAGCTCCAAAACCCCTTTGTTTCCTTCAAGTGAAAGAAGGATCATGGATCTAACATTGCCTGCAAAGCATTACACAGATGGGTTCTGTTTATTCCACCGCCACCGCCCCAAAAATCGCCGCCGGCAACTCAAATCCAAGCAAAGGGTCTCATCGGACCCCAATTCCTTAACCCTTTCTTCCATTCGTAAACAGCTCAACGTCGTTCGAGCGGCTTCCAGGGTCGATTCGTTTAGCTCCAATGGAAGATTGCAACACACCCATTTGAGCAATGGCGCCAATTCGAATAACTCGCAGAGCTTTGAGGAATTCGAGAACAACAATCATCTTCGTCGGCTCGTAAGAAATGGGGAATTGGAAGAAGGGTTTAAATTTCTTGAGGATATGATTTATCGTGGTGATATTCCTGATATAATTGCTTGTACTAGTTTGATTCGTGGGTTGTGTAAGACTGGGAAAACTAGGAAAGCTACAAGGGTTATGGAAATTTTGGAAGAATCTGGTGCTGTTCCTGATGTGATTACTTATAATGTTCTTATTAGTGGGTATTGTAAATCTGGTGAAATTGGTTGTGCTTTACAGCTTTTGGATAGAATGAGTGTTTCCCCTGATGTTGTTACATATAATACAATCTTGAGAACTTTATGTGATAGTGGGAAATTGAAACAAGCTATGGAAGTTCTTGATAGACAGTTGCAAAGAGAGTGTTATCCTGATGTAATAACTTATACTATCTTGATTGAAGCAACTTGTAAGGAAAGTGGTGTTGGACAGGCAATGAAATTTTTGGATGAAATGAGGGATAAAGGGTGTAAGCCTGATGTTGTTACTTATAATGTTCTTATCAATGGGATTTGTAAGGAAGGGAGGTTGGATGAAGCTATTAAGTTCTTGAATAATATGCCTTCCTATGGCTGCCAACCGAATGTGATAACGCATAACATCATTTTGCGTAGTATGTGTAGTACCGGACGGTGGATGGATGCCGAGAAGCTGTTGGCTGAAATGGTTCGGAAGGGGTGTTCTCCTAGTGTTGTTACTTTCAATATCTTGATTAACTTTTTGTGTCGAAAGGGCTTGCTTGGTCGAGCGATTGATGTCTTGGAGAAGATGCCGCAGCATGGGTGTACTCCGAATTCATTGAGTTATAACCCGTTGCTCCATGGATTCTGCAAAGAGAAGAAGATGGATCGGGCAATTAAGTATTTGGATATCATGGTTTCGAGAGGATGTTTCCCTGATATCGTGACCTACAATACTCTGTTGACAGCACTGTGTAAAGATGGGAAGGTAGATGTTGCAGTTGAGATACTGAATCAACTTAGTTGCAAAAGTTGTTCTCCTGTATTGATTACATACAACACAGTCATTGATGGGCTTTCAAAGGTAGGAAAAACCGAAGATGCCATTAAACTTCTAGAGGAAATGAAGGTAAAAGGACTCAAACCGGATATAATTACGTACTCCTCGCTCGTCGGGGGACTGAGTAGAGAAGGAAAAGTCGATGAAGCGATTGCATTTTTCCATGATTTAGAAGAGATGGGTGTGAGGCCAAATGCCATCACCTACAACTCTATCATGTTAGGACTCTGCAAGGTTCGACAAACCAGTCGAGCCATCGATTTCTTGGCGTACATGGTTGCCCGAGGCTGCAAACCGACCGAGGCTTCATACATGATTCTCGTTGAAGGATTGGCGTATGAAGGTTTAGCCAAGGAGGCATTGGAGTTGCTGAATGAACTGTGCTCTAGAGGGGTTGTGAAGAAGAGTTCTGCTGAGCAGGTTGTGGTCAAAAACTCTTTTTGATGTATTTTTAGTTCAGCTGTTGTTTAATGAGCCTTAGATTTCATCATTAAATCTTCTTAGATGTGGGGGTTTTGATAGTCTTGGAGCCTAATTATGTTATCATCTTTGTCAAAATGGATAGAATCCAAATCAATTTTGTAATATAAAAAATGCTCATGGGTAAGTTTTGAAGTATGCACCAGAGTTGATTGAGCA

Coding sequence (CDS)

ATGGATCTAACATTGCCTGCAAAGCATTACACAGATGGGTTCTGTTTATTCCACCGCCACCGCCCCAAAAATCGCCGCCGGCAACTCAAATCCAAGCAAAGGGTCTCATCGGACCCCAATTCCTTAACCCTTTCTTCCATTCGTAAACAGCTCAACGTCGTTCGAGCGGCTTCCAGGGTCGATTCGTTTAGCTCCAATGGAAGATTGCAACACACCCATTTGAGCAATGGCGCCAATTCGAATAACTCGCAGAGCTTTGAGGAATTCGAGAACAACAATCATCTTCGTCGGCTCGTAAGAAATGGGGAATTGGAAGAAGGGTTTAAATTTCTTGAGGATATGATTTATCGTGGTGATATTCCTGATATAATTGCTTGTACTAGTTTGATTCGTGGGTTGTGTAAGACTGGGAAAACTAGGAAAGCTACAAGGGTTATGGAAATTTTGGAAGAATCTGGTGCTGTTCCTGATGTGATTACTTATAATGTTCTTATTAGTGGGTATTGTAAATCTGGTGAAATTGGTTGTGCTTTACAGCTTTTGGATAGAATGAGTGTTTCCCCTGATGTTGTTACATATAATACAATCTTGAGAACTTTATGTGATAGTGGGAAATTGAAACAAGCTATGGAAGTTCTTGATAGACAGTTGCAAAGAGAGTGTTATCCTGATGTAATAACTTATACTATCTTGATTGAAGCAACTTGTAAGGAAAGTGGTGTTGGACAGGCAATGAAATTTTTGGATGAAATGAGGGATAAAGGGTGTAAGCCTGATGTTGTTACTTATAATGTTCTTATCAATGGGATTTGTAAGGAAGGGAGGTTGGATGAAGCTATTAAGTTCTTGAATAATATGCCTTCCTATGGCTGCCAACCGAATGTGATAACGCATAACATCATTTTGCGTAGTATGTGTAGTACCGGACGGTGGATGGATGCCGAGAAGCTGTTGGCTGAAATGGTTCGGAAGGGGTGTTCTCCTAGTGTTGTTACTTTCAATATCTTGATTAACTTTTTGTGTCGAAAGGGCTTGCTTGGTCGAGCGATTGATGTCTTGGAGAAGATGCCGCAGCATGGGTGTACTCCGAATTCATTGAGTTATAACCCGTTGCTCCATGGATTCTGCAAAGAGAAGAAGATGGATCGGGCAATTAAGTATTTGGATATCATGGTTTCGAGAGGATGTTTCCCTGATATCGTGACCTACAATACTCTGTTGACAGCACTGTGTAAAGATGGGAAGGTAGATGTTGCAGTTGAGATACTGAATCAACTTAGTTGCAAAAGTTGTTCTCCTGTATTGATTACATACAACACAGTCATTGATGGGCTTTCAAAGGTAGGAAAAACCGAAGATGCCATTAAACTTCTAGAGGAAATGAAGGTAAAAGGACTCAAACCGGATATAATTACGTACTCCTCGCTCGTCGGGGGACTGAGTAGAGAAGGAAAAGTCGATGAAGCGATTGCATTTTTCCATGATTTAGAAGAGATGGGTGTGAGGCCAAATGCCATCACCTACAACTCTATCATGTTAGGACTCTGCAAGGTTCGACAAACCAGTCGAGCCATCGATTTCTTGGCGTACATGGTTGCCCGAGGCTGCAAACCGACCGAGGCTTCATACATGATTCTCGTTGAAGGATTGGCGTATGAAGGTTTAGCCAAGGAGGCATTGGAGTTGCTGAATGAACTGTGCTCTAGAGGGGTTGTGAAGAAGAGTTCTGCTGAGCAGGTTGTGGTCAAAAACTCTTTTTGA

Protein sequence

MDLTLPAKHYTDGFCLFHRHRPKNRRRQLKSKQRVSSDPNSLTLSSIRKQLNVVRAASRVDSFSSNGRLQHTHLSNGANSNNSQSFEEFENNNHLRRLVRNGELEEGFKFLEDMIYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEESGAVPDVITYNVLISGYCKSGEIGCALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKFLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIKYLDIMVSRGCFPDIVTYNTLLTALCKDGKVDVAVEILNQLSCKSCSPVLITYNTVIDGLSKVGKTEDAIKLLEEMKVKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILVEGLAYEGLAKEALELLNELCSRGVVKKSSAEQVVVKNSF
Homology
BLAST of Sed0004950 vs. NCBI nr
Match: XP_038886112.1 (pentatricopeptide repeat-containing protein At1g09900 [Benincasa hispida])

HSP 1 Score: 1062.8 bits (2747), Expect = 1.1e-306
Identity = 541/610 (88.69%), Postives = 563/610 (92.30%), Query Frame = 0

Query: 1   MDLTLPAKHYTDGFCLFHRHRPKNRRRQLKSKQRVSSDPNSLTL-------------SSI 60
           MD+TLPAKHYTDGFCLFHR   KNR R++++K RVSS+ NSL L              S 
Sbjct: 1   MDITLPAKHYTDGFCLFHRRPSKNRGRKVRAKGRVSSETNSLRLYVGEKGKPRFLVIPSD 60

Query: 61  RKQLNVVRAASRVDSFSSNGRLQ------HTHL-----SNGANSNNSQSFEEFENNNHLR 120
             +  +VRA  RVD+FSSNGRLQ      HTHL     S+ ++SN+SQSFEEFENNNHLR
Sbjct: 61  CSEEPLVRAVPRVDTFSSNGRLQQGEKNLHTHLNGSSSSSSSSSNHSQSFEEFENNNHLR 120

Query: 121 RLVRNGELEEGFKFLEDMIYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEESGAVP 180
           RLVRNGELEEGFKFLEDM+YRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILE+SGAVP
Sbjct: 121 RLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVP 180

Query: 181 DVITYNVLISGYCKSGEIGCALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 240
           DVITYNVLISGYCKSGEIG ALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ
Sbjct: 181 DVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 240

Query: 241 LQRECYPDVITYTILIEATCKESGVGQAMKFLDEMRDKGCKPDVVTYNVLINGICKEGRL 300
           LQRECYPDVITYTILIEATCKESGVGQAMK LDEMRDKGCKPDVVTYNVLINGICKEGRL
Sbjct: 241 LQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 300

Query: 301 DEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNIL 360
           DEAIKFLN+MPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNIL
Sbjct: 301 DEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNIL 360

Query: 361 INFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIKYLDIMVSRGC 420
           INFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAI+YLDIMVSRGC
Sbjct: 361 INFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 420

Query: 421 FPDIVTYNTLLTALCKDGKVDVAVEILNQLSCKSCSPVLITYNTVIDGLSKVGKTEDAIK 480
           +PDIVTYNTLLTALCKDGKVDVAVEILNQL  K CSPVLITYNTVIDGLSKVGKTEDAIK
Sbjct: 421 YPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTEDAIK 480

Query: 481 LLEEMKVKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLC 540
           LL+EMK KGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLC
Sbjct: 481 LLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLC 540

Query: 541 KVRQTSRAIDFLAYMVARGCKPTEASYMILVEGLAYEGLAKEALELLNELCSRGVVKKSS 587
           KVRQT RAIDFLAYMVA+GCKPTEASYMIL+EGLAYEGLAKEALELLNELCSRGVVKKSS
Sbjct: 541 KVRQTVRAIDFLAYMVAKGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVVKKSS 600

BLAST of Sed0004950 vs. NCBI nr
Match: XP_022132179.1 (pentatricopeptide repeat-containing protein At1g09900 [Momordica charantia])

HSP 1 Score: 1050.0 bits (2714), Expect = 7.3e-303
Identity = 539/623 (86.52%), Postives = 563/623 (90.37%), Query Frame = 0

Query: 1   MDLTLPAKHYTDGFCLFHRHRPKNRRRQLKSKQRVSSDPNSLTL---------------- 60
           MD+TLPAKHYTDGFCLF R   +NR R++++  RV+S+ NSL L                
Sbjct: 1   MDVTLPAKHYTDGFCLFQRQSTRNRGRKVRAGGRVTSEANSLRLYVGGKGKARFLVVPPS 60

Query: 61  ----------SSIRKQLNVVRAASRVDSFSSNGRLQ------HTHLSNGAN-----SNNS 120
                       I KQL++VRA SRVD+FSSNGRLQ      H HL NG+N     SN+S
Sbjct: 61  DCSVYGEKSHDLISKQLSIVRAISRVDTFSSNGRLQHGEKNLHGHL-NGSNSSSSASNHS 120

Query: 121 QSFEEFENNNHLRRLVRNGELEEGFKFLEDMIYRGDIPDIIACTSLIRGLCKTGKTRKAT 180
           QSFEEFENNNHLRRLVRNGELEEGFKF+E+M+  GDIPDIIACTSLIRGLCKTGKTRKAT
Sbjct: 121 QSFEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKAT 180

Query: 181 RVMEILEESGAVPDVITYNVLISGYCKSGEIGCALQLLDRMSVSPDVVTYNTILRTLCDS 240
           RVMEILE+SGAVPDVITYNVLISGYCKSGEIG ALQLLDRMSVSPDVVTYNTILRTLCDS
Sbjct: 181 RVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDS 240

Query: 241 GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKFLDEMRDKGCKPDVVTY 300
           GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMK LDEM++KGCKPDVVT+
Sbjct: 241 GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTF 300

Query: 301 NVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR 360
           NVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR
Sbjct: 301 NVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR 360

Query: 361 KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR 420
           KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR
Sbjct: 361 KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR 420

Query: 421 AIKYLDIMVSRGCFPDIVTYNTLLTALCKDGKVDVAVEILNQLSCKSCSPVLITYNTVID 480
           AI+YLDIMVSRGC+PDIVTYNTLLTALCKDGKVDVAVEILNQLS K CSPVLITYNTVID
Sbjct: 421 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVID 480

Query: 481 GLSKVGKTEDAIKLLEEMKVKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRP 540
           GLSKVGKTEDAIKLL+EMK KGLKPDIITYSSLV GLSREGKVDEAIAFFHDLEEMGVRP
Sbjct: 481 GLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVRGLSREGKVDEAIAFFHDLEEMGVRP 540

Query: 541 NAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILVEGLAYEGLAKEALELL 587
           NAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMIL+EGLAYEGLAKEALELL
Sbjct: 541 NAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELL 600

BLAST of Sed0004950 vs. NCBI nr
Match: XP_008444958.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g09900 [Cucumis melo] >KAA0065076.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1045.8 bits (2703), Expect = 1.4e-301
Identity = 532/610 (87.21%), Postives = 555/610 (90.98%), Query Frame = 0

Query: 1   MDLTLPAKHYTDGFCLFHRHRPKNRRRQLKSKQRVSSDPNSLTL-------------SSI 60
           MDLTLPAKHYTDGFCLFHRH  KNR R++ +K RVSS+ NSL L              S 
Sbjct: 1   MDLTLPAKHYTDGFCLFHRHTTKNRDRRVTAKGRVSSETNSLRLHVGEKGKHRFFVIPSY 60

Query: 61  RKQLNVVRAASRVDSFSSNGRLQ------HTHL-----SNGANSNNSQSFEEFENNNHLR 120
                +VRA  RVD+FSSNGRL       HTHL     S+ ++SN SQS EEFENNNHLR
Sbjct: 61  GSDEQLVRAVPRVDTFSSNGRLPHGEKNLHTHLNGSSSSSSSSSNYSQSSEEFENNNHLR 120

Query: 121 RLVRNGELEEGFKFLEDMIYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEESGAVP 180
           RLVRNGELEEGFKFLEDM+YRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILE+SGAVP
Sbjct: 121 RLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVP 180

Query: 181 DVITYNVLISGYCKSGEIGCALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 240
           DVITYNVLISGYCKSGEIG ALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ
Sbjct: 181 DVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 240

Query: 241 LQRECYPDVITYTILIEATCKESGVGQAMKFLDEMRDKGCKPDVVTYNVLINGICKEGRL 300
           LQRECYPDVITYTILIEATCKESGVGQAMK LDEMRDKGCKPDVVTYNVLINGICKEGRL
Sbjct: 241 LQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 300

Query: 301 DEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNIL 360
           DEAIKFLN+MPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEM+RKGCSPSVVTFNIL
Sbjct: 301 DEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMIRKGCSPSVVTFNIL 360

Query: 361 INFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIKYLDIMVSRGC 420
           INFLCRKGL+GRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAI+YLDIMVSRGC
Sbjct: 361 INFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 420

Query: 421 FPDIVTYNTLLTALCKDGKVDVAVEILNQLSCKSCSPVLITYNTVIDGLSKVGKTEDAIK 480
           +PDIVTYNTLLTALCKDGKVD+AVEILNQL  K CSPVLITYNTVIDGLSKVGKT DAIK
Sbjct: 421 YPDIVTYNTLLTALCKDGKVDIAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTGDAIK 480

Query: 481 LLEEMKVKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLC 540
           LL+EMK KGLKPDIITYS+LVGGLSREGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLC
Sbjct: 481 LLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLC 540

Query: 541 KVRQTSRAIDFLAYMVARGCKPTEASYMILVEGLAYEGLAKEALELLNELCSRGVVKKSS 587
           K RQT RAIDFLAYMVARGCKPTEASYMIL+EGLAYEGL KEALELL+EL SRGVV+KSS
Sbjct: 541 KARQTVRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLTKEALELLDELYSRGVVRKSS 600

BLAST of Sed0004950 vs. NCBI nr
Match: XP_011649703.1 (pentatricopeptide repeat-containing protein At1g09900 [Cucumis sativus] >KAE8652149.1 hypothetical protein Csa_022252 [Cucumis sativus])

HSP 1 Score: 1033.9 bits (2672), Expect = 5.4e-298
Identity = 523/608 (86.02%), Postives = 553/608 (90.95%), Query Frame = 0

Query: 1   MDLTLPAKHYTDGFCLFHRHRPKNRRRQLKSKQRVSSDPNSLTLSSIRK----------- 60
           MDLTLPAKHYTDGFCLFHRH  KNR R++ +K RVSS+ NSL L +  K           
Sbjct: 1   MDLTLPAKHYTDGFCLFHRHTAKNRDRRVMAKGRVSSETNSLRLHAGEKGRFFVIPSYGS 60

Query: 61  QLNVVRAASRVDSFSSNGRLQ------HTHL-----SNGANSNNSQSFEEFENNNHLRRL 120
           +  +VRA  RVD+FSSNGRL       HTHL     S+ + SN+SQS EE ENNNHLRRL
Sbjct: 61  EEQLVRAVPRVDTFSSNGRLSHGEKNLHTHLNGSSSSSSSYSNHSQSSEEVENNNHLRRL 120

Query: 121 VRNGELEEGFKFLEDMIYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEESGAVPDV 180
           VRNGELEEGFKFLEDM+ RGDIPDIIACTSLIRGLCKTGKT KATRVMEILE+SGAVPDV
Sbjct: 121 VRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDV 180

Query: 181 ITYNVLISGYCKSGEIGCALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQ 240
           ITYNVLISGYCK+GEIG ALQLLDRMSVSPDVVTYNTILRTLCDSGKLK+AMEVLDRQ+Q
Sbjct: 181 ITYNVLISGYCKTGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQ 240

Query: 241 RECYPDVITYTILIEATCKESGVGQAMKFLDEMRDKGCKPDVVTYNVLINGICKEGRLDE 300
           RECYPDVITYTILIEATCKESGVGQAMK LDEMRDKGCKPDVVTYNVLINGICKEGRLDE
Sbjct: 241 RECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDE 300

Query: 301 AIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNILIN 360
           AI+FLN+MPSYGCQPNVITHNIILRSMCSTGRWMDAEK LAEM+RKGCSPSVVTFNILIN
Sbjct: 301 AIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILIN 360

Query: 361 FLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIKYLDIMVSRGCFP 420
           FLCRKGL+GRAIDVLEKMPQHGCTPNSLSYNPLLH  CK+KKM+RAI+YLDIMVSRGC+P
Sbjct: 361 FLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYP 420

Query: 421 DIVTYNTLLTALCKDGKVDVAVEILNQLSCKSCSPVLITYNTVIDGLSKVGKTEDAIKLL 480
           DIVTYNTLLTALCKDGKVDVAVEILNQL  K CSPVLITYNTVIDGLSKVGKT+DAIKLL
Sbjct: 421 DIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLL 480

Query: 481 EEMKVKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLCKV 540
           +EMK KGLKPDIITYS+LVGGLSREGKVDEAIAFFHDLEEMGV+PNAITYNSIMLGLCK 
Sbjct: 481 DEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKA 540

Query: 541 RQTSRAIDFLAYMVARGCKPTEASYMILVEGLAYEGLAKEALELLNELCSRGVVKKSSAE 587
           RQT RAIDFLAYMVARGCKPTE SYMIL+EGLAYEGLAKEALELLNELCSRGVVKKSSAE
Sbjct: 541 RQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAE 600

BLAST of Sed0004950 vs. NCBI nr
Match: XP_023546483.1 (pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita pepo subsp. pepo] >XP_023546485.1 pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita pepo subsp. pepo] >XP_023546486.1 pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita pepo subsp. pepo] >XP_023546487.1 pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 978.8 bits (2529), Expect = 2.1e-281
Identity = 495/603 (82.09%), Postives = 533/603 (88.39%), Query Frame = 0

Query: 1   MDLTLPAKHYTDGFCLFHRHRPKNRRRQLKSKQRVSSDPNS-------------LTLSSI 60
           MD+TL AKHYTDGFCLF R   KNR R++++++R + + NS             L + S 
Sbjct: 1   MDITLHAKHYTDGFCLFQRRSTKNRGRKVRAERRATPEINSVSFFVGGKGKPRFLVIPSD 60

Query: 61  RKQLNVVRAASRVDSFSSNGRLQHTHL----SNGANSNNSQSFEEFENNNHLRRLVRNGE 120
             + + VRA  +  S      L HTHL    S+  +SN+SQSFEEFENNNHLRRLVRNGE
Sbjct: 61  CSEESFVRAVLKNPSQQGEKNL-HTHLNGSSSSSFSSNHSQSFEEFENNNHLRRLVRNGE 120

Query: 121 LEEGFKFLEDMIYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEESGAVPDVITYNV 180
           LEEGFKF+E M+YRGDIPD I CTSLIRGLCKTGKTRKA RVMEILE+SGAVPDVITYNV
Sbjct: 121 LEEGFKFIEGMVYRGDIPDAIVCTSLIRGLCKTGKTRKAARVMEILEDSGAVPDVITYNV 180

Query: 181 LISGYCKSGEIGCALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQRECYP 240
           LISGYCKSGEI  AL+LLDRMS+SPDV+TYN ILRTLCDSGKLK+AMEVL RQLQRECYP
Sbjct: 181 LISGYCKSGEIDNALKLLDRMSISPDVITYNIILRTLCDSGKLKEAMEVLHRQLQRECYP 240

Query: 241 DVITYTILIEATCKESGVGQAMKFLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIKFL 300
           DVITYTILIEATCKESGVGQAMK LDEMR+KGCKPDVVTYNVLINGICKEGRLDEAI+FL
Sbjct: 241 DVITYTILIEATCKESGVGQAMKLLDEMREKGCKPDVVTYNVLINGICKEGRLDEAIEFL 300

Query: 301 NNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNILINFLCRK 360
           N M SYGCQPNVITHNIILRSMCSTGRW DAEKLLAEMVRKGCSPSVVTFNILINFLCRK
Sbjct: 301 NEMSSYGCQPNVITHNIILRSMCSTGRWTDAEKLLAEMVRKGCSPSVVTFNILINFLCRK 360

Query: 361 GLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIKYLDIMVSRGCFPDIVTY 420
           GLLGRAID+LEKMPQHGCTPNS SYNPLLHGFCKEKKM+RAI+YLDIM SRGC+PDIVTY
Sbjct: 361 GLLGRAIDILEKMPQHGCTPNSSSYNPLLHGFCKEKKMERAIEYLDIMASRGCYPDIVTY 420

Query: 421 NTLLTALCKDGKVDVAVEILNQLSCKSCSPVLITYNTVIDGLSKVGKTEDAIKLLEEMKV 480
           NTLLTALCKDGKVDVAVEILNQL  K CSPVLITYNTVIDGLSK GKTEDA+KLL+EMK 
Sbjct: 421 NTLLTALCKDGKVDVAVEILNQLGTKGCSPVLITYNTVIDGLSKAGKTEDAVKLLDEMKE 480

Query: 481 KGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLCKVRQTSR 540
           KGLKPDIITYSSLVGGL REGKVDEAIAFFHDLEE+GVRPN ITYNSIMLGLCKV+QT R
Sbjct: 481 KGLKPDIITYSSLVGGLCREGKVDEAIAFFHDLEEVGVRPNVITYNSIMLGLCKVQQTVR 540

Query: 541 AIDFLAYMVARGCKPTEASYMILVEGLAYEGLAKEALELLNELCSRGVVKKSSAEQVVVK 587
           AIDFLA MVARGCKP EASYMIL+EGLAYEGLAKEALELL+ELCSRGV+KKSSAE+VV+K
Sbjct: 541 AIDFLASMVARGCKPNEASYMILIEGLAYEGLAKEALELLDELCSRGVMKKSSAERVVIK 600

BLAST of Sed0004950 vs. ExPASy Swiss-Prot
Match: Q3EDF8 (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1)

HSP 1 Score: 878.6 bits (2269), Expect = 3.8e-254
Identity = 444/597 (74.37%), Postives = 504/597 (84.42%), Query Frame = 0

Query: 1   MDLTLPAKHYTDGFCLFHR-HRPKNRRRQLKSKQRVSSDPNS-LTLSS-IRKQLNVVRAA 60
           MDL +      +GFCL  + HR   R  +L    R S   +S + L S  R +L +V AA
Sbjct: 1   MDLMVSTSSAQEGFCLIQQFHREYKRGNKLDVSCRTSGSISSKIPLGSRKRNRLVLVSAA 60

Query: 61  SRVDSFSSNGRLQHTHL-------SNG----ANSNNSQSFEEFENNNHLRRLVRNGELEE 120
           S+V+S   NGR Q           SNG    ++ N+S + E+ E+NNHLR++VR GELEE
Sbjct: 61  SKVESSGLNGRAQKFETLSSGYSNSNGNGHYSSVNSSFALEDVESNNHLRQMVRTGELEE 120

Query: 121 GFKFLEDMIYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEESGAVPDVITYNVLIS 180
           GFKFLE+M+Y G++PDII CT+LIRG C+ GKTRKA +++EILE SGAVPDVITYNV+IS
Sbjct: 121 GFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMIS 180

Query: 181 GYCKSGEIGCALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQRECYPDVI 240
           GYCK+GEI  AL +LDRMSVSPDVVTYNTILR+LCDSGKLKQAMEVLDR LQR+CYPDVI
Sbjct: 181 GYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVI 240

Query: 241 TYTILIEATCKESGVGQAMKFLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNM 300
           TYTILIEATC++SGVG AMK LDEMRD+GC PDVVTYNVL+NGICKEGRLDEAIKFLN+M
Sbjct: 241 TYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM 300

Query: 301 PSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNILINFLCRKGLL 360
           PS GCQPNVITHNIILRSMCSTGRWMDAEKLLA+M+RKG SPSVVTFNILINFLCRKGLL
Sbjct: 301 PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLL 360

Query: 361 GRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIKYLDIMVSRGCFPDIVTYNTL 420
           GRAID+LEKMPQHGC PNSLSYNPLLHGFCKEKKMDRAI+YL+ MVSRGC+PDIVTYNT+
Sbjct: 361 GRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTM 420

Query: 421 LTALCKDGKVDVAVEILNQLSCKSCSPVLITYNTVIDGLSKVGKTEDAIKLLEEMKVKGL 480
           LTALCKDGKV+ AVEILNQLS K CSPVLITYNTVIDGL+K GKT  AIKLL+EM+ K L
Sbjct: 421 LTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDL 480

Query: 481 KPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLCKVRQTSRAID 540
           KPD ITYSSLVGGLSREGKVDEAI FFH+ E MG+RPNA+T+NSIMLGLCK RQT RAID
Sbjct: 481 KPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAID 540

Query: 541 FLAYMVARGCKPTEASYMILVEGLAYEGLAKEALELLNELCSRGVVKKSSAEQVVVK 584
           FL +M+ RGCKP E SY IL+EGLAYEG+AKEALELLNELC++G++KKSSAEQV  K
Sbjct: 541 FLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQVAGK 597

BLAST of Sed0004950 vs. ExPASy Swiss-Prot
Match: Q9SR00 (Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g04760 PE=2 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 2.0e-122
Identity = 236/567 (41.62%), Postives = 344/567 (60.67%), Query Frame = 0

Query: 30  KSKQRVSSDPNSLTLSSIRKQLNVVRAASRVD----SFSSNG--RLQHTHLSNGA----- 89
           K+++  S+  + L LS  R  L     ++  +    SFSS+G   LQ T  ++       
Sbjct: 18  KTQKPYSNSSHGLLLSHNRSSLLTFSNSNPNNDNGRSFSSSGARNLQTTTTTDATLPTER 77

Query: 90  NSNNSQS--FEEFENNNHLRRLVRNGELEEGFKFLEDMIYRGDIPDIIACTSLIRGLCKT 149
              +SQS  F + +      R  R+G   E    LE M+ +G  PD+I CT LI+G    
Sbjct: 78  RQQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTL 137

Query: 150 GKTRKATRVMEILEESGAVPDVITYNVLISGYCKSGEIGCALQLLDRM---SVSPDVVTY 209
               KA RVMEILE+ G  PDV  YN LI+G+CK   I  A ++LDRM     SPD VTY
Sbjct: 138 RNIPKAVRVMEILEKFGQ-PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTY 197

Query: 210 NTILRTLCDSGKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKFLDEMRD 269
           N ++ +LC  GKL  A++VL++ L   C P VITYTILIEAT  E GV +A+K +DEM  
Sbjct: 198 NIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLS 257

Query: 270 KGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMD 329
           +G KPD+ TYN +I G+CKEG +D A + + N+   GC+P+VI++NI+LR++ + G+W +
Sbjct: 258 RGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEE 317

Query: 330 AEKLLAEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLH 389
            EKL+ +M  + C P+VVT++ILI  LCR G +  A+++L+ M + G TP++ SY+PL+ 
Sbjct: 318 GEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIA 377

Query: 390 GFCKEKKMDRAIKYLDIMVSRGCFPDIVTYNTLLTALCKDGKVDVAVEILNQLSCKSCSP 449
            FC+E ++D AI++L+ M+S GC PDIV YNT+L  LCK+GK D A+EI  +L    CSP
Sbjct: 378 AFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSP 437

Query: 450 VLITYNTVIDGLSKVGKTEDAIKLLEEMKVKGLKPDIITYSSLVGGLSREGKVDEAIAFF 509
              +YNT+   L   G    A+ ++ EM   G+ PD ITY+S++  L REG VDEA    
Sbjct: 438 NSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELL 497

Query: 510 HDLEEMGVRPNAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILVEGLAYE 569
            D+      P+ +TYN ++LG CK  +   AI+ L  MV  GC+P E +Y +L+EG+ + 
Sbjct: 498 VDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFA 557

Query: 570 GLAKEALELLNELCSRGVVKKSSAEQV 581
           G   EA+EL N+L     + + S +++
Sbjct: 558 GYRAEAMELANDLVRIDAISEYSFKRL 583

BLAST of Sed0004950 vs. ExPASy Swiss-Prot
Match: A3KPF8 (Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g79080 PE=2 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 1.5e-93
Identity = 201/554 (36.28%), Postives = 315/554 (56.86%), Query Frame = 0

Query: 42  LTLSSIRKQLNVVRAASRV------DSFSSNGRLQHTHLSNGANSNNSQSFEEFENNNHL 101
           L  SS+ K +  V A++++       +F+  G      L +G+ S++ +S E        
Sbjct: 33  LHFSSVSKGVARVLASTQITLSPKDSAFTITGSSWKPDLDSGSFSDDPRSDEP------- 92

Query: 102 RRLVRNGELEEGFKFLEDMIYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEESGAV 161
                   L + F  LE ++  G  P++   T L+  LCK  + +KA RV+E++  SG +
Sbjct: 93  -------NLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGII 152

Query: 162 PDVITYNVLISGYCKSGEIGCALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKQAMEV 221
           PD   Y  L++  CK G +G A+QL+++M       + VTYN ++R LC  G L Q+++ 
Sbjct: 153 PDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQF 212

Query: 222 LDRQLQRECYPDVITYTILIEATCKESGVGQAMKFLDEMRDKGCKPDVVTYNVLINGICK 281
           ++R +Q+   P+  TY+ L+EA  KE G  +A+K LDE+  KG +P++V+YNVL+ G CK
Sbjct: 213 VERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCK 272

Query: 282 EGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVT 341
           EGR D+A+     +P+ G + NV+++NI+LR +C  GRW +A  LLAEM     +PSVVT
Sbjct: 273 EGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVT 332

Query: 342 FNILINFLCRKGLLGRAIDVLEKMPQ--HGCTPNSLSYNPLLHGFCKEKKMDRAIKYLDI 401
           +NILIN L   G   +A+ VL++M +  H     + SYNP++   CKE K+D  +K LD 
Sbjct: 333 YNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDE 392

Query: 402 MVSRGCFPDIVTYNTLLTALCKDGKVDVAVEILNQLSCKSCSPVLITYNTVIDGLSKVGK 461
           M+ R C P+  TYN + +    + KV  A  I+  LS K        Y +VI  L + G 
Sbjct: 393 MIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGN 452

Query: 462 TEDAIKLLEEMKVKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEM-GVRPNAITYN 521
           T  A +LL EM   G  PD  TYS+L+ GL  EG    A+     +EE    +P    +N
Sbjct: 453 TFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFN 512

Query: 522 SIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILVEGLAYEGLAKEALELLNELCSR 581
           +++LGLCK+R+T  A++    MV +   P E +Y ILVEG+A+E   + A E+L+EL  R
Sbjct: 513 AMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLR 572

Query: 582 GVVKKSSAEQVVVK 584
            V+ +++ +++V++
Sbjct: 573 KVIGQNAVDRIVMQ 572

BLAST of Sed0004950 vs. ExPASy Swiss-Prot
Match: Q9FRS4 (Pentatricopeptide repeat-containing protein At1g08610 OS=Arabidopsis thaliana OX=3702 GN=At1g08610 PE=2 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 3.8e-92
Identity = 183/483 (37.89%), Postives = 271/483 (56.11%), Query Frame = 0

Query: 87  EEFENNNHLRRLVRNGELEEGFKFLEDMIYRGDIPDIIACTSLIRGLCKTGKTRKATRVM 146
           +E  NN  L  L  NG+L +  K +E M     +P   +C++L+RGL +  +  KA  ++
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162

Query: 147 EILEESGAVPDVITYNVLISGYCKSGEIGCALQLLDRMSVS---PDVVTYNTILRTLCDS 206
            ++  SG VPD ITYN++I   CK G I  AL LL+ MS+S   PDV+TYNT++R + D 
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222

Query: 207 GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKFLDEMRDKGCKPDVVTY 266
           G  +QA+     QLQ  C P +ITYT+L+E  C+  G  +A++ L++M  +GC PD+VTY
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTY 282

Query: 267 NVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR 326
           N L+N  C+ G L+E    + ++ S+G + N +T+N +L S+CS   W + E++L  M +
Sbjct: 283 NSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQ 342

Query: 327 KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR 386
               P+V+T+NILIN LC+  LL RAID   +                            
Sbjct: 343 TSYCPTVITYNILINGLCKARLLSRAIDFFYQ---------------------------- 402

Query: 387 AIKYLDIMVSRGCFPDIVTYNTLLTALCKDGKVDVAVEILNQLSCKSCSPVLITYNTVID 446
                  M+ + C PDIVTYNT+L A+ K+G VD A+E+L  L    C P LITYN+VID
Sbjct: 403 -------MLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVID 462

Query: 447 GLSKVGKTEDAIKLLEEMKVKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRP 506
           GL+K G  + A++L  +M   G+ PD IT  SL+ G  R   V+EA     +    G   
Sbjct: 463 GLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGI 522

Query: 507 NAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILVEGLAYEGLAKEALELL 566
              TY  ++ GLCK ++   AI+ +  M+  GCKP E  Y  +V+G+   G+  EA++L 
Sbjct: 523 RGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEAVQLQ 550

BLAST of Sed0004950 vs. ExPASy Swiss-Prot
Match: Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 1.6e-87
Identity = 163/488 (33.40%), Postives = 275/488 (56.35%), Query Frame = 0

Query: 99  VRNGELEEGFKFLEDMIYRGDIPDIIACTSLIRGLCKTGKTRKATR-VMEILEESGAVPD 158
           +  G+L+   +  E M+  G     ++   ++ G CK G+   A   + E+  + G  PD
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294

Query: 159 VITYNVLISGYCKSGEIGCALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKQAMEVLD 218
             T+N L++G CK+G +  A++++D M      PDV TYN+++  LC  G++K+A+EVLD
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 354

Query: 219 RQLQRECYPDVITYTILIEATCKESGVGQAMKFLDEMRDKGCKPDVVTYNVLINGICKEG 278
           + + R+C P+ +TY  LI   CKE+ V +A +    +  KG  PDV T+N LI G+C   
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414

Query: 279 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFN 338
               A++    M S GC+P+  T+N+++ S+CS G+  +A  +L +M   GC+ SV+T+N
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474

Query: 339 ILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIKYLDIMVSR 398
            LI+  C+      A ++ ++M  HG + NS++YN L+ G CK ++++ A + +D M+  
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME 534

Query: 399 GCFPDIVTYNTLLTALCKDGKVDVAVEILNQLSCKSCSPVLITYNTVIDGLSKVGKTEDA 458
           G  PD  TYN+LLT  C+ G +  A +I+  ++   C P ++TY T+I GL K G+ E A
Sbjct: 535 GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594

Query: 459 IKLLEEMKVKGLKPDIITYSSLVGGLSREGKVDEAIAFFHD-LEEMGVRPNAITYNSIML 518
            KLL  +++KG+      Y+ ++ GL R+ K  EAI  F + LE+    P+A++Y  +  
Sbjct: 595 SKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFR 654

Query: 519 GLCKVRQTSR-AIDFLAYMVARGCKPTEASYMILVEGLAYEGLAKEALELLNELCSRGVV 578
           GLC      R A+DFL  ++ +G  P  +S  +L EGL    + +  ++L+N +  +   
Sbjct: 655 GLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARF 714

Query: 579 KKSSAEQV 581
            +     V
Sbjct: 715 SEEEVSMV 722

BLAST of Sed0004950 vs. ExPASy TrEMBL
Match: A0A6J1BSC2 (pentatricopeptide repeat-containing protein At1g09900 OS=Momordica charantia OX=3673 GN=LOC111005101 PE=4 SV=1)

HSP 1 Score: 1050.0 bits (2714), Expect = 3.6e-303
Identity = 539/623 (86.52%), Postives = 563/623 (90.37%), Query Frame = 0

Query: 1   MDLTLPAKHYTDGFCLFHRHRPKNRRRQLKSKQRVSSDPNSLTL---------------- 60
           MD+TLPAKHYTDGFCLF R   +NR R++++  RV+S+ NSL L                
Sbjct: 1   MDVTLPAKHYTDGFCLFQRQSTRNRGRKVRAGGRVTSEANSLRLYVGGKGKARFLVVPPS 60

Query: 61  ----------SSIRKQLNVVRAASRVDSFSSNGRLQ------HTHLSNGAN-----SNNS 120
                       I KQL++VRA SRVD+FSSNGRLQ      H HL NG+N     SN+S
Sbjct: 61  DCSVYGEKSHDLISKQLSIVRAISRVDTFSSNGRLQHGEKNLHGHL-NGSNSSSSASNHS 120

Query: 121 QSFEEFENNNHLRRLVRNGELEEGFKFLEDMIYRGDIPDIIACTSLIRGLCKTGKTRKAT 180
           QSFEEFENNNHLRRLVRNGELEEGFKF+E+M+  GDIPDIIACTSLIRGLCKTGKTRKAT
Sbjct: 121 QSFEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKAT 180

Query: 181 RVMEILEESGAVPDVITYNVLISGYCKSGEIGCALQLLDRMSVSPDVVTYNTILRTLCDS 240
           RVMEILE+SGAVPDVITYNVLISGYCKSGEIG ALQLLDRMSVSPDVVTYNTILRTLCDS
Sbjct: 181 RVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDS 240

Query: 241 GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKFLDEMRDKGCKPDVVTY 300
           GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMK LDEM++KGCKPDVVT+
Sbjct: 241 GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTF 300

Query: 301 NVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR 360
           NVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR
Sbjct: 301 NVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR 360

Query: 361 KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR 420
           KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR
Sbjct: 361 KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR 420

Query: 421 AIKYLDIMVSRGCFPDIVTYNTLLTALCKDGKVDVAVEILNQLSCKSCSPVLITYNTVID 480
           AI+YLDIMVSRGC+PDIVTYNTLLTALCKDGKVDVAVEILNQLS K CSPVLITYNTVID
Sbjct: 421 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVID 480

Query: 481 GLSKVGKTEDAIKLLEEMKVKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRP 540
           GLSKVGKTEDAIKLL+EMK KGLKPDIITYSSLV GLSREGKVDEAIAFFHDLEEMGVRP
Sbjct: 481 GLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVRGLSREGKVDEAIAFFHDLEEMGVRP 540

Query: 541 NAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILVEGLAYEGLAKEALELL 587
           NAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMIL+EGLAYEGLAKEALELL
Sbjct: 541 NAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELL 600

BLAST of Sed0004950 vs. ExPASy TrEMBL
Match: A0A5A7VFH1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004060 PE=4 SV=1)

HSP 1 Score: 1045.8 bits (2703), Expect = 6.7e-302
Identity = 532/610 (87.21%), Postives = 555/610 (90.98%), Query Frame = 0

Query: 1   MDLTLPAKHYTDGFCLFHRHRPKNRRRQLKSKQRVSSDPNSLTL-------------SSI 60
           MDLTLPAKHYTDGFCLFHRH  KNR R++ +K RVSS+ NSL L              S 
Sbjct: 1   MDLTLPAKHYTDGFCLFHRHTTKNRDRRVTAKGRVSSETNSLRLHVGEKGKHRFFVIPSY 60

Query: 61  RKQLNVVRAASRVDSFSSNGRLQ------HTHL-----SNGANSNNSQSFEEFENNNHLR 120
                +VRA  RVD+FSSNGRL       HTHL     S+ ++SN SQS EEFENNNHLR
Sbjct: 61  GSDEQLVRAVPRVDTFSSNGRLPHGEKNLHTHLNGSSSSSSSSSNYSQSSEEFENNNHLR 120

Query: 121 RLVRNGELEEGFKFLEDMIYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEESGAVP 180
           RLVRNGELEEGFKFLEDM+YRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILE+SGAVP
Sbjct: 121 RLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVP 180

Query: 181 DVITYNVLISGYCKSGEIGCALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 240
           DVITYNVLISGYCKSGEIG ALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ
Sbjct: 181 DVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 240

Query: 241 LQRECYPDVITYTILIEATCKESGVGQAMKFLDEMRDKGCKPDVVTYNVLINGICKEGRL 300
           LQRECYPDVITYTILIEATCKESGVGQAMK LDEMRDKGCKPDVVTYNVLINGICKEGRL
Sbjct: 241 LQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 300

Query: 301 DEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNIL 360
           DEAIKFLN+MPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEM+RKGCSPSVVTFNIL
Sbjct: 301 DEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMIRKGCSPSVVTFNIL 360

Query: 361 INFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIKYLDIMVSRGC 420
           INFLCRKGL+GRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAI+YLDIMVSRGC
Sbjct: 361 INFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 420

Query: 421 FPDIVTYNTLLTALCKDGKVDVAVEILNQLSCKSCSPVLITYNTVIDGLSKVGKTEDAIK 480
           +PDIVTYNTLLTALCKDGKVD+AVEILNQL  K CSPVLITYNTVIDGLSKVGKT DAIK
Sbjct: 421 YPDIVTYNTLLTALCKDGKVDIAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTGDAIK 480

Query: 481 LLEEMKVKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLC 540
           LL+EMK KGLKPDIITYS+LVGGLSREGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLC
Sbjct: 481 LLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLC 540

Query: 541 KVRQTSRAIDFLAYMVARGCKPTEASYMILVEGLAYEGLAKEALELLNELCSRGVVKKSS 587
           K RQT RAIDFLAYMVARGCKPTEASYMIL+EGLAYEGL KEALELL+EL SRGVV+KSS
Sbjct: 541 KARQTVRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLTKEALELLDELYSRGVVRKSS 600

BLAST of Sed0004950 vs. ExPASy TrEMBL
Match: A0A1S3BB35 (pentatricopeptide repeat-containing protein At1g09900 OS=Cucumis melo OX=3656 GN=LOC103488143 PE=4 SV=1)

HSP 1 Score: 1045.8 bits (2703), Expect = 6.7e-302
Identity = 532/610 (87.21%), Postives = 555/610 (90.98%), Query Frame = 0

Query: 1   MDLTLPAKHYTDGFCLFHRHRPKNRRRQLKSKQRVSSDPNSLTL-------------SSI 60
           MDLTLPAKHYTDGFCLFHRH  KNR R++ +K RVSS+ NSL L              S 
Sbjct: 1   MDLTLPAKHYTDGFCLFHRHTTKNRDRRVTAKGRVSSETNSLRLHVGEKGKHRFFVIPSY 60

Query: 61  RKQLNVVRAASRVDSFSSNGRLQ------HTHL-----SNGANSNNSQSFEEFENNNHLR 120
                +VRA  RVD+FSSNGRL       HTHL     S+ ++SN SQS EEFENNNHLR
Sbjct: 61  GSDEQLVRAVPRVDTFSSNGRLPHGEKNLHTHLNGSSSSSSSSSNYSQSSEEFENNNHLR 120

Query: 121 RLVRNGELEEGFKFLEDMIYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEESGAVP 180
           RLVRNGELEEGFKFLEDM+YRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILE+SGAVP
Sbjct: 121 RLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVP 180

Query: 181 DVITYNVLISGYCKSGEIGCALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 240
           DVITYNVLISGYCKSGEIG ALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ
Sbjct: 181 DVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 240

Query: 241 LQRECYPDVITYTILIEATCKESGVGQAMKFLDEMRDKGCKPDVVTYNVLINGICKEGRL 300
           LQRECYPDVITYTILIEATCKESGVGQAMK LDEMRDKGCKPDVVTYNVLINGICKEGRL
Sbjct: 241 LQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 300

Query: 301 DEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNIL 360
           DEAIKFLN+MPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEM+RKGCSPSVVTFNIL
Sbjct: 301 DEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMIRKGCSPSVVTFNIL 360

Query: 361 INFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIKYLDIMVSRGC 420
           INFLCRKGL+GRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAI+YLDIMVSRGC
Sbjct: 361 INFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 420

Query: 421 FPDIVTYNTLLTALCKDGKVDVAVEILNQLSCKSCSPVLITYNTVIDGLSKVGKTEDAIK 480
           +PDIVTYNTLLTALCKDGKVD+AVEILNQL  K CSPVLITYNTVIDGLSKVGKT DAIK
Sbjct: 421 YPDIVTYNTLLTALCKDGKVDIAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTGDAIK 480

Query: 481 LLEEMKVKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLC 540
           LL+EMK KGLKPDIITYS+LVGGLSREGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLC
Sbjct: 481 LLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLC 540

Query: 541 KVRQTSRAIDFLAYMVARGCKPTEASYMILVEGLAYEGLAKEALELLNELCSRGVVKKSS 587
           K RQT RAIDFLAYMVARGCKPTEASYMIL+EGLAYEGL KEALELL+EL SRGVV+KSS
Sbjct: 541 KARQTVRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLTKEALELLDELYSRGVVRKSS 600

BLAST of Sed0004950 vs. ExPASy TrEMBL
Match: A0A6J1HFE3 (pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita moschata OX=3662 GN=LOC111462544 PE=4 SV=1)

HSP 1 Score: 977.6 bits (2526), Expect = 2.2e-281
Identity = 494/603 (81.92%), Postives = 532/603 (88.23%), Query Frame = 0

Query: 1   MDLTLPAKHYTDGFCLFHRHRPKNRRRQLKSKQRVSSDPNS-------------LTLSSI 60
           MD+TL AKHYTDGFCLF R   KNR R +++++R + + NS             L + S 
Sbjct: 1   MDITLHAKHYTDGFCLFQRRSTKNRGRNVRAERRATPETNSVSFFVGGKGKPRFLVVPSD 60

Query: 61  RKQLNVVRAASRVDSFSSNGRLQHTHL----SNGANSNNSQSFEEFENNNHLRRLVRNGE 120
             + + VRA  +  S      + HTHL    S+  +SN+SQSFEEFENNNHLRRLVRNGE
Sbjct: 61  CSEESFVRAVLKNPSQQGEKNV-HTHLNGSSSSSFSSNHSQSFEEFENNNHLRRLVRNGE 120

Query: 121 LEEGFKFLEDMIYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEESGAVPDVITYNV 180
           LEEGFKF+E M+YRGDIPD I CTSLIRGLCKTGKTRKA RVMEILE+SGAVPDVITYNV
Sbjct: 121 LEEGFKFIEGMVYRGDIPDAIVCTSLIRGLCKTGKTRKAARVMEILEDSGAVPDVITYNV 180

Query: 181 LISGYCKSGEIGCALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQRECYP 240
           LISGYCKSGEI  AL+LLDRMS+SPDV+TYN ILRTLCDSGKLK+AMEVL RQLQRECYP
Sbjct: 181 LISGYCKSGEIDNALKLLDRMSISPDVITYNIILRTLCDSGKLKEAMEVLHRQLQRECYP 240

Query: 241 DVITYTILIEATCKESGVGQAMKFLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIKFL 300
           DVITYTILIEATCKESGVGQAMK LDEMR+KGCKPDVVTYNVLINGICKEGRLDEAI+FL
Sbjct: 241 DVITYTILIEATCKESGVGQAMKLLDEMREKGCKPDVVTYNVLINGICKEGRLDEAIEFL 300

Query: 301 NNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNILINFLCRK 360
           N M SYGCQPNVITHNIILRSMCSTGRW DAEKLLAEMVRKGCSPSVVTFNILINFLCRK
Sbjct: 301 NEMSSYGCQPNVITHNIILRSMCSTGRWTDAEKLLAEMVRKGCSPSVVTFNILINFLCRK 360

Query: 361 GLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIKYLDIMVSRGCFPDIVTY 420
           GLLGRAID+LEKMPQHGCTPNS SYNPLLHGFCKEKKM+RAI+YLDIM SRGC+PDIVTY
Sbjct: 361 GLLGRAIDILEKMPQHGCTPNSSSYNPLLHGFCKEKKMERAIEYLDIMASRGCYPDIVTY 420

Query: 421 NTLLTALCKDGKVDVAVEILNQLSCKSCSPVLITYNTVIDGLSKVGKTEDAIKLLEEMKV 480
           NTLLTALCKDGKVDVAVEILNQL  K CSPVLITYNTVIDGLSK GKTEDA+KLL+EMK 
Sbjct: 421 NTLLTALCKDGKVDVAVEILNQLGTKGCSPVLITYNTVIDGLSKAGKTEDAVKLLDEMKE 480

Query: 481 KGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLCKVRQTSR 540
           KGLKPDIITYSSLVGGL REGKVDEAIAFFHDLEE+GVRPN ITYNSIMLGLCKV+QT R
Sbjct: 481 KGLKPDIITYSSLVGGLCREGKVDEAIAFFHDLEEVGVRPNVITYNSIMLGLCKVQQTVR 540

Query: 541 AIDFLAYMVARGCKPTEASYMILVEGLAYEGLAKEALELLNELCSRGVVKKSSAEQVVVK 587
           AIDFLA MVARGCKP EASYMIL+EGLAYEGLAKEALELL+ELCSRGV+KKSSAE+VV+K
Sbjct: 541 AIDFLASMVARGCKPNEASYMILIEGLAYEGLAKEALELLDELCSRGVMKKSSAERVVIK 600

BLAST of Sed0004950 vs. ExPASy TrEMBL
Match: A0A6J1K404 (pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita maxima OX=3661 GN=LOC111492114 PE=4 SV=1)

HSP 1 Score: 976.9 bits (2524), Expect = 3.8e-281
Identity = 492/603 (81.59%), Postives = 533/603 (88.39%), Query Frame = 0

Query: 1   MDLTLPAKHYTDGFCLFHRHRPKNRRRQLKSKQRVSSDPNSLTLS-------------SI 60
           MD+TL AKHYTDGFCLF R   KN  R +++++R + + NS++ S             S 
Sbjct: 1   MDITLHAKHYTDGFCLFQRRSTKNSSRNVRAERRATPETNSVSFSVGGKGKPRFLVIPSD 60

Query: 61  RKQLNVVRAASRVDSFSSNGRLQHTHL----SNGANSNNSQSFEEFENNNHLRRLVRNGE 120
             + + VRA  + +      +  HTHL    S+  +SN+SQSFEEFENNNHLRRLVRNGE
Sbjct: 61  CSEESFVRAVLK-NPLQQGEKNLHTHLNGSSSSSFSSNHSQSFEEFENNNHLRRLVRNGE 120

Query: 121 LEEGFKFLEDMIYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEESGAVPDVITYNV 180
           LEEGFKF+E M+YRGDIPD I CTSLIRGLCKTGKTRKA RVMEILE+SGAVPDVITYNV
Sbjct: 121 LEEGFKFIEGMVYRGDIPDAIVCTSLIRGLCKTGKTRKAARVMEILEDSGAVPDVITYNV 180

Query: 181 LISGYCKSGEIGCALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQRECYP 240
           LISGYCKSGEI  AL+LLDRMS+SPDV+TYN ILRTLCDSGKLK+AMEVL RQLQRECYP
Sbjct: 181 LISGYCKSGEIDNALKLLDRMSISPDVITYNIILRTLCDSGKLKEAMEVLHRQLQRECYP 240

Query: 241 DVITYTILIEATCKESGVGQAMKFLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIKFL 300
           DVITYTILIEATCKESGVGQAMK LDEMR+KGCKPDVVTYNVLINGICKEGRLDEAI+FL
Sbjct: 241 DVITYTILIEATCKESGVGQAMKLLDEMREKGCKPDVVTYNVLINGICKEGRLDEAIEFL 300

Query: 301 NNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNILINFLCRK 360
           N M SYGCQPNVITHNIILRSMCSTGRW DAEKLLAEMVRKGCSPSVVTFNILINFLCRK
Sbjct: 301 NEMSSYGCQPNVITHNIILRSMCSTGRWTDAEKLLAEMVRKGCSPSVVTFNILINFLCRK 360

Query: 361 GLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIKYLDIMVSRGCFPDIVTY 420
           GLLGRAID+LEKMPQHGCTPNS SYNPLLHGFCKEKKM+RAI+YLDIM SRGC+PDIVTY
Sbjct: 361 GLLGRAIDILEKMPQHGCTPNSSSYNPLLHGFCKEKKMERAIEYLDIMASRGCYPDIVTY 420

Query: 421 NTLLTALCKDGKVDVAVEILNQLSCKSCSPVLITYNTVIDGLSKVGKTEDAIKLLEEMKV 480
           NTLLTALCKDGKVDVAVEILNQL  KSCSPVLITYNTVIDGLSK GKTEDA+KLL+EMK 
Sbjct: 421 NTLLTALCKDGKVDVAVEILNQLGTKSCSPVLITYNTVIDGLSKAGKTEDAVKLLDEMKE 480

Query: 481 KGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLCKVRQTSR 540
           KGLKPDIITYSSL+GGL REGKVDEAIAFFHDLEE+GVRPN ITYNSIMLGLCKV+QT R
Sbjct: 481 KGLKPDIITYSSLIGGLCREGKVDEAIAFFHDLEEVGVRPNVITYNSIMLGLCKVQQTVR 540

Query: 541 AIDFLAYMVARGCKPTEASYMILVEGLAYEGLAKEALELLNELCSRGVVKKSSAEQVVVK 587
           AIDFLA MVARGCKP EASYMIL+EGLAYEGLAKEALELL+ELCSRGV+KKSSAE+VV+K
Sbjct: 541 AIDFLASMVARGCKPNEASYMILIEGLAYEGLAKEALELLDELCSRGVMKKSSAERVVIK 600

BLAST of Sed0004950 vs. TAIR 10
Match: AT1G09900.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 878.6 bits (2269), Expect = 2.7e-255
Identity = 444/597 (74.37%), Postives = 504/597 (84.42%), Query Frame = 0

Query: 1   MDLTLPAKHYTDGFCLFHR-HRPKNRRRQLKSKQRVSSDPNS-LTLSS-IRKQLNVVRAA 60
           MDL +      +GFCL  + HR   R  +L    R S   +S + L S  R +L +V AA
Sbjct: 1   MDLMVSTSSAQEGFCLIQQFHREYKRGNKLDVSCRTSGSISSKIPLGSRKRNRLVLVSAA 60

Query: 61  SRVDSFSSNGRLQHTHL-------SNG----ANSNNSQSFEEFENNNHLRRLVRNGELEE 120
           S+V+S   NGR Q           SNG    ++ N+S + E+ E+NNHLR++VR GELEE
Sbjct: 61  SKVESSGLNGRAQKFETLSSGYSNSNGNGHYSSVNSSFALEDVESNNHLRQMVRTGELEE 120

Query: 121 GFKFLEDMIYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEESGAVPDVITYNVLIS 180
           GFKFLE+M+Y G++PDII CT+LIRG C+ GKTRKA +++EILE SGAVPDVITYNV+IS
Sbjct: 121 GFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMIS 180

Query: 181 GYCKSGEIGCALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQRECYPDVI 240
           GYCK+GEI  AL +LDRMSVSPDVVTYNTILR+LCDSGKLKQAMEVLDR LQR+CYPDVI
Sbjct: 181 GYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVI 240

Query: 241 TYTILIEATCKESGVGQAMKFLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNM 300
           TYTILIEATC++SGVG AMK LDEMRD+GC PDVVTYNVL+NGICKEGRLDEAIKFLN+M
Sbjct: 241 TYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM 300

Query: 301 PSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNILINFLCRKGLL 360
           PS GCQPNVITHNIILRSMCSTGRWMDAEKLLA+M+RKG SPSVVTFNILINFLCRKGLL
Sbjct: 301 PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLL 360

Query: 361 GRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIKYLDIMVSRGCFPDIVTYNTL 420
           GRAID+LEKMPQHGC PNSLSYNPLLHGFCKEKKMDRAI+YL+ MVSRGC+PDIVTYNT+
Sbjct: 361 GRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTM 420

Query: 421 LTALCKDGKVDVAVEILNQLSCKSCSPVLITYNTVIDGLSKVGKTEDAIKLLEEMKVKGL 480
           LTALCKDGKV+ AVEILNQLS K CSPVLITYNTVIDGL+K GKT  AIKLL+EM+ K L
Sbjct: 421 LTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDL 480

Query: 481 KPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLCKVRQTSRAID 540
           KPD ITYSSLVGGLSREGKVDEAI FFH+ E MG+RPNA+T+NSIMLGLCK RQT RAID
Sbjct: 481 KPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAID 540

Query: 541 FLAYMVARGCKPTEASYMILVEGLAYEGLAKEALELLNELCSRGVVKKSSAEQVVVK 584
           FL +M+ RGCKP E SY IL+EGLAYEG+AKEALELLNELC++G++KKSSAEQV  K
Sbjct: 541 FLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQVAGK 597

BLAST of Sed0004950 vs. TAIR 10
Match: AT3G04760.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 441.0 bits (1133), Expect = 1.5e-123
Identity = 236/567 (41.62%), Postives = 344/567 (60.67%), Query Frame = 0

Query: 30  KSKQRVSSDPNSLTLSSIRKQLNVVRAASRVD----SFSSNG--RLQHTHLSNGA----- 89
           K+++  S+  + L LS  R  L     ++  +    SFSS+G   LQ T  ++       
Sbjct: 18  KTQKPYSNSSHGLLLSHNRSSLLTFSNSNPNNDNGRSFSSSGARNLQTTTTTDATLPTER 77

Query: 90  NSNNSQS--FEEFENNNHLRRLVRNGELEEGFKFLEDMIYRGDIPDIIACTSLIRGLCKT 149
              +SQS  F + +      R  R+G   E    LE M+ +G  PD+I CT LI+G    
Sbjct: 78  RQQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTL 137

Query: 150 GKTRKATRVMEILEESGAVPDVITYNVLISGYCKSGEIGCALQLLDRM---SVSPDVVTY 209
               KA RVMEILE+ G  PDV  YN LI+G+CK   I  A ++LDRM     SPD VTY
Sbjct: 138 RNIPKAVRVMEILEKFGQ-PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTY 197

Query: 210 NTILRTLCDSGKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKFLDEMRD 269
           N ++ +LC  GKL  A++VL++ L   C P VITYTILIEAT  E GV +A+K +DEM  
Sbjct: 198 NIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLS 257

Query: 270 KGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMD 329
           +G KPD+ TYN +I G+CKEG +D A + + N+   GC+P+VI++NI+LR++ + G+W +
Sbjct: 258 RGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEE 317

Query: 330 AEKLLAEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLH 389
            EKL+ +M  + C P+VVT++ILI  LCR G +  A+++L+ M + G TP++ SY+PL+ 
Sbjct: 318 GEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIA 377

Query: 390 GFCKEKKMDRAIKYLDIMVSRGCFPDIVTYNTLLTALCKDGKVDVAVEILNQLSCKSCSP 449
            FC+E ++D AI++L+ M+S GC PDIV YNT+L  LCK+GK D A+EI  +L    CSP
Sbjct: 378 AFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSP 437

Query: 450 VLITYNTVIDGLSKVGKTEDAIKLLEEMKVKGLKPDIITYSSLVGGLSREGKVDEAIAFF 509
              +YNT+   L   G    A+ ++ EM   G+ PD ITY+S++  L REG VDEA    
Sbjct: 438 NSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELL 497

Query: 510 HDLEEMGVRPNAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILVEGLAYE 569
            D+      P+ +TYN ++LG CK  +   AI+ L  MV  GC+P E +Y +L+EG+ + 
Sbjct: 498 VDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFA 557

Query: 570 GLAKEALELLNELCSRGVVKKSSAEQV 581
           G   EA+EL N+L     + + S +++
Sbjct: 558 GYRAEAMELANDLVRIDAISEYSFKRL 583

BLAST of Sed0004950 vs. TAIR 10
Match: AT1G79080.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 345.1 bits (884), Expect = 1.1e-94
Identity = 201/554 (36.28%), Postives = 315/554 (56.86%), Query Frame = 0

Query: 42  LTLSSIRKQLNVVRAASRV------DSFSSNGRLQHTHLSNGANSNNSQSFEEFENNNHL 101
           L  SS+ K +  V A++++       +F+  G      L +G+ S++ +S E        
Sbjct: 33  LHFSSVSKGVARVLASTQITLSPKDSAFTITGSSWKPDLDSGSFSDDPRSDEP------- 92

Query: 102 RRLVRNGELEEGFKFLEDMIYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEESGAV 161
                   L + F  LE ++  G  P++   T L+  LCK  + +KA RV+E++  SG +
Sbjct: 93  -------NLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGII 152

Query: 162 PDVITYNVLISGYCKSGEIGCALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKQAMEV 221
           PD   Y  L++  CK G +G A+QL+++M       + VTYN ++R LC  G L Q+++ 
Sbjct: 153 PDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQF 212

Query: 222 LDRQLQRECYPDVITYTILIEATCKESGVGQAMKFLDEMRDKGCKPDVVTYNVLINGICK 281
           ++R +Q+   P+  TY+ L+EA  KE G  +A+K LDE+  KG +P++V+YNVL+ G CK
Sbjct: 213 VERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCK 272

Query: 282 EGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVT 341
           EGR D+A+     +P+ G + NV+++NI+LR +C  GRW +A  LLAEM     +PSVVT
Sbjct: 273 EGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVT 332

Query: 342 FNILINFLCRKGLLGRAIDVLEKMPQ--HGCTPNSLSYNPLLHGFCKEKKMDRAIKYLDI 401
           +NILIN L   G   +A+ VL++M +  H     + SYNP++   CKE K+D  +K LD 
Sbjct: 333 YNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDE 392

Query: 402 MVSRGCFPDIVTYNTLLTALCKDGKVDVAVEILNQLSCKSCSPVLITYNTVIDGLSKVGK 461
           M+ R C P+  TYN + +    + KV  A  I+  LS K        Y +VI  L + G 
Sbjct: 393 MIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGN 452

Query: 462 TEDAIKLLEEMKVKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEM-GVRPNAITYN 521
           T  A +LL EM   G  PD  TYS+L+ GL  EG    A+     +EE    +P    +N
Sbjct: 453 TFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFN 512

Query: 522 SIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILVEGLAYEGLAKEALELLNELCSR 581
           +++LGLCK+R+T  A++    MV +   P E +Y ILVEG+A+E   + A E+L+EL  R
Sbjct: 513 AMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLR 572

Query: 582 GVVKKSSAEQVVVK 584
            V+ +++ +++V++
Sbjct: 573 KVIGQNAVDRIVMQ 572

BLAST of Sed0004950 vs. TAIR 10
Match: AT1G08610.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 340.5 bits (872), Expect = 2.7e-93
Identity = 183/483 (37.89%), Postives = 271/483 (56.11%), Query Frame = 0

Query: 87  EEFENNNHLRRLVRNGELEEGFKFLEDMIYRGDIPDIIACTSLIRGLCKTGKTRKATRVM 146
           +E  NN  L  L  NG+L +  K +E M     +P   +C++L+RGL +  +  KA  ++
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162

Query: 147 EILEESGAVPDVITYNVLISGYCKSGEIGCALQLLDRMSVS---PDVVTYNTILRTLCDS 206
            ++  SG VPD ITYN++I   CK G I  AL LL+ MS+S   PDV+TYNT++R + D 
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222

Query: 207 GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKFLDEMRDKGCKPDVVTY 266
           G  +QA+     QLQ  C P +ITYT+L+E  C+  G  +A++ L++M  +GC PD+VTY
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTY 282

Query: 267 NVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR 326
           N L+N  C+ G L+E    + ++ S+G + N +T+N +L S+CS   W + E++L  M +
Sbjct: 283 NSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQ 342

Query: 327 KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR 386
               P+V+T+NILIN LC+  LL RAID   +                            
Sbjct: 343 TSYCPTVITYNILINGLCKARLLSRAIDFFYQ---------------------------- 402

Query: 387 AIKYLDIMVSRGCFPDIVTYNTLLTALCKDGKVDVAVEILNQLSCKSCSPVLITYNTVID 446
                  M+ + C PDIVTYNT+L A+ K+G VD A+E+L  L    C P LITYN+VID
Sbjct: 403 -------MLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVID 462

Query: 447 GLSKVGKTEDAIKLLEEMKVKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRP 506
           GL+K G  + A++L  +M   G+ PD IT  SL+ G  R   V+EA     +    G   
Sbjct: 463 GLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGI 522

Query: 507 NAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILVEGLAYEGLAKEALELL 566
              TY  ++ GLCK ++   AI+ +  M+  GCKP E  Y  +V+G+   G+  EA++L 
Sbjct: 523 RGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEAVQLQ 550

BLAST of Sed0004950 vs. TAIR 10
Match: AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 325.1 bits (832), Expect = 1.2e-88
Identity = 163/488 (33.40%), Postives = 275/488 (56.35%), Query Frame = 0

Query: 99  VRNGELEEGFKFLEDMIYRGDIPDIIACTSLIRGLCKTGKTRKATR-VMEILEESGAVPD 158
           +  G+L+   +  E M+  G     ++   ++ G CK G+   A   + E+  + G  PD
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294

Query: 159 VITYNVLISGYCKSGEIGCALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKQAMEVLD 218
             T+N L++G CK+G +  A++++D M      PDV TYN+++  LC  G++K+A+EVLD
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 354

Query: 219 RQLQRECYPDVITYTILIEATCKESGVGQAMKFLDEMRDKGCKPDVVTYNVLINGICKEG 278
           + + R+C P+ +TY  LI   CKE+ V +A +    +  KG  PDV T+N LI G+C   
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414

Query: 279 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFN 338
               A++    M S GC+P+  T+N+++ S+CS G+  +A  +L +M   GC+ SV+T+N
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474

Query: 339 ILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIKYLDIMVSR 398
            LI+  C+      A ++ ++M  HG + NS++YN L+ G CK ++++ A + +D M+  
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME 534

Query: 399 GCFPDIVTYNTLLTALCKDGKVDVAVEILNQLSCKSCSPVLITYNTVIDGLSKVGKTEDA 458
           G  PD  TYN+LLT  C+ G +  A +I+  ++   C P ++TY T+I GL K G+ E A
Sbjct: 535 GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594

Query: 459 IKLLEEMKVKGLKPDIITYSSLVGGLSREGKVDEAIAFFHD-LEEMGVRPNAITYNSIML 518
            KLL  +++KG+      Y+ ++ GL R+ K  EAI  F + LE+    P+A++Y  +  
Sbjct: 595 SKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFR 654

Query: 519 GLCKVRQTSR-AIDFLAYMVARGCKPTEASYMILVEGLAYEGLAKEALELLNELCSRGVV 578
           GLC      R A+DFL  ++ +G  P  +S  +L EGL    + +  ++L+N +  +   
Sbjct: 655 GLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARF 714

Query: 579 KKSSAEQV 581
            +     V
Sbjct: 715 SEEEVSMV 722

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038886112.11.1e-30688.69pentatricopeptide repeat-containing protein At1g09900 [Benincasa hispida][more]
XP_022132179.17.3e-30386.52pentatricopeptide repeat-containing protein At1g09900 [Momordica charantia][more]
XP_008444958.11.4e-30187.21PREDICTED: pentatricopeptide repeat-containing protein At1g09900 [Cucumis melo] ... [more]
XP_011649703.15.4e-29886.02pentatricopeptide repeat-containing protein At1g09900 [Cucumis sativus] >KAE8652... [more]
XP_023546483.12.1e-28182.09pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita pepo subsp... [more]
Match NameE-valueIdentityDescription
Q3EDF83.8e-25474.37Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX... [more]
Q9SR002.0e-12241.62Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidop... [more]
A3KPF81.5e-9336.28Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidop... [more]
Q9FRS43.8e-9237.89Pentatricopeptide repeat-containing protein At1g08610 OS=Arabidopsis thaliana OX... [more]
Q9LFF11.6e-8733.40Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A6J1BSC23.6e-30386.52pentatricopeptide repeat-containing protein At1g09900 OS=Momordica charantia OX=... [more]
A0A5A7VFH16.7e-30287.21Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3BB356.7e-30287.21pentatricopeptide repeat-containing protein At1g09900 OS=Cucumis melo OX=3656 GN... [more]
A0A6J1HFE32.2e-28181.92pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita moschata... [more]
A0A6J1K4043.8e-28181.59pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita maxima O... [more]
Match NameE-valueIdentityDescription
AT1G09900.12.7e-25574.37Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT3G04760.11.5e-12341.62Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT1G79080.11.1e-9436.28Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G08610.12.7e-9337.89Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G53700.11.2e-8833.40Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 98..118
e-value: 0.5
score: 10.7
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 188..237
e-value: 4.3E-14
score: 52.5
coord: 363..412
e-value: 7.3E-16
score: 58.1
coord: 436..481
e-value: 1.8E-15
score: 56.8
coord: 503..551
e-value: 1.1E-11
score: 44.7
coord: 258..307
e-value: 2.9E-18
score: 65.8
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 324..356
e-value: 1.5E-12
score: 47.0
coord: 153..185
e-value: 9.0E-13
score: 47.7
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 261..295
e-value: 2.1E-10
score: 38.1
coord: 226..260
e-value: 1.2E-6
score: 26.3
coord: 296..330
e-value: 6.0E-9
score: 33.5
coord: 367..400
e-value: 1.3E-8
score: 32.5
coord: 331..364
e-value: 4.9E-8
score: 30.7
coord: 436..470
e-value: 7.3E-11
score: 39.6
coord: 159..185
e-value: 3.8E-7
score: 27.9
coord: 401..433
e-value: 2.6E-7
score: 28.4
coord: 506..540
e-value: 3.8E-7
score: 27.9
coord: 191..225
e-value: 2.5E-6
score: 25.3
coord: 471..505
e-value: 8.4E-8
score: 29.9
coord: 125..158
e-value: 2.9E-5
score: 22.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 539..573
score: 8.812943
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 504..538
score: 11.597113
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 434..468
score: 12.737088
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 364..398
score: 12.134216
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 399..433
score: 12.002681
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 224..258
score: 12.178061
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 122..156
score: 10.950397
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 294..328
score: 12.572669
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 259..293
score: 14.238786
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 189..223
score: 11.750571
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 329..363
score: 12.298636
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 157..187
score: 10.807899
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 469..503
score: 12.92343
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 218..286
e-value: 7.2E-26
score: 92.9
coord: 357..427
e-value: 2.8E-22
score: 81.1
coord: 428..498
e-value: 4.7E-22
score: 80.4
coord: 287..356
e-value: 1.4E-21
score: 78.9
coord: 499..569
e-value: 3.8E-16
score: 61.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 41..217
e-value: 1.4E-33
score: 118.6
NoneNo IPR availablePANTHERPTHR47932ATPASE EXPRESSION PROTEIN 3coord: 1..583
NoneNo IPR availablePANTHERPTHR47932:SF45OS02G0565400 PROTEINcoord: 1..583

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0004950.1Sed0004950.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding