Sed0004834 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATCGCAACGTCAAAGCAACAGCTTCCTTGCTCGAACGGGTTCTACTTACTTGCGCATCTCAGGTTTGTCATTGGGATTGAAAGTGATTACATAAATACTGGATTGTGTTCTTCTTTTAAATGCAATATTTGATGACAAATGTTCATTAGAGTGCATTCTTGTTAGTGTAGTCTTAACCTCAGTTGGGGATTGGCTTCTTGTCCCTTAGCCTTCGTGTACCTATTTTTGATGATGCATTTGTTTTTATGAAAGGTAAAGCTATTTTTAACAACAAAGATGTGTGGTCTTGGTTATTACTTATTGGGTTCTTTTTAATCTACAAATGCCACAATGTTTTTGGGGGAGTTTCTTTTTATTCATTGATTGAACAACTTTTGTGTATATATATATATAGAATGGTGCCAGGTATGTATTTATGGAAATGTCATGAACTTGTACAAAGTTAACTGTGTATAGTTTGAATCACGATTCGGATTGAGGTTTACTGCAATACTATATGATTGATGTTCTATGTTTGCTTGACGAGTTAGTGTTTTCTTAGATGGTTTTTGCTTTTCTCTTTTGGGAATGTTGGGGTTCGTGTTGCAGCAAAGGTTCCCAAAGTTGAACGTGATATGTGTTTGAAAGGATTTGTTGCTCTGAAATCTTGCATGCAAAATACGGTATATATTTATATATATCAACATTCATATTAGAGAATATGGGGTTCCACCTCAAAACCAAACTAATTGGCTACGAAGGAAGTAACCCATATCTTTTTTATATTGATGTTGGACTCCCCCACTTTCCAATGTGGGACAATTGAGATCTCAACGATTCGTAATTCCTTTCTTAGCATACATGAGAAAAAGAATAACTTTAAGGTCGATTGATAACAGTTCTGCCTCTGGTTGGGTTGTCTGTAAGCGTATCTAACTTCGGTAAAAATATTCAGAAACTACTCAAGAACACAAGAAAATAACAAATGTATGTAATCCCTGTAATATAGAGTTCTTCTATATTCAGTAGGAGATATTCTCATTAATAAACACATAATAACAGAAAAATAAGCAACATGATGACAACAAGAACCCACAACATATAGAGAGTGCTAACTGGTAACCTCCTTTAAGGCAAGCCTTCCAAATTCTTCACCCCAATATAATGGCCTTATACTATTATTTATAATCAAGGCCTTCCTAAATAATTAATTACCCTTGCACCCCTTAGCATCCTTATACTTATTTACTAATATTTTTATTTGTTTTTAGTTTACTTCCAAAATTGTATATAAAATCTTAGTCAAATTTAAGAAGTAAAAAAGAAAACTTAAGTATACAAGTGAAAAACTAAATGAAAAAAGAACTTTAAGCTTCGTTTTAAAAACAAAACTGTCATCAAAGGTGGCTTTCTTTTGTTGAAATATTTGCACTGAAGTATCGAATGGTTGTTGGATAACTTGGTGGGAAACCATAGGCATCTTTGCTTCACTGAAGAGAACATAATACGTGGAGTTGTATTGGTTGGAGTAGAGAAGTTGGAGAAATCTTCTACATTCGCGGCATTGAAGCGAACATGGTATTAACTATCTTATAAAACAATACTTGCTCATTTATACATGTTTTCTGCAGTGAGGCTTGAATGAATAAGCTTAACTTGGATTGCTTTAATTGCTTGATTCCACTTTCAGAAACATTTCTCAAAGGTTAAAAGGTGACTTGATAGGCTGGAAGACCATCAAGATTACAACCCAGTGCTGGTCTAAGCAGATCAAGTGCCCTCTCACATGTTTATATGCAATATCCACACTTACGACGTAGAATTCCTCGACCAAGGGGCTTATTTAACAATGACGTATATAAGTTATTGATCTGCCCAACAGTGGATCAGGTAATCCATCTTCAGCTGCTGCACTTGTACTCAAAATGCATCTGAAGCGTTAAACTTGTTTTTGTTAATGTTTCTTTCTTTCTTTTCTACAGATCTTCTCATGAAAAACAGTTCCGTTTAATCCTGCTAACATTTATACCACTGATGCAATTACGGAAGTGCCCATTTTATCTATTCAATATTCCTTTGACTTAAAGATCATTGCAATACAAAGATCATTGCAATACCTAATATCGTTTCGACAAACTTTATCATTGCAATTGTGTTGGGTATTTGGGAAGTTAGAAAATTGAACAGTTTTTGGAGGATGTAGGCAATGAAGTAGGAAAGGTGTT ATGGATCGCAACGTCAAAGCAACAGCTTCCTTGCTCGAACGGGTTCTACTTACTTGCGCATCTCAGTGTTTTCTTAGATGGTTTTTGCTTTTCTCTTTTGGGAATGTTGGGGTTCGTGTTGCAGCAAAGGTTCCCAAAGTTGAACGTGATATGTGTTTGAAAGGATTTGTTGCTCTGAAATCTTGCATGCAAAATACGTCAAATTTAAGAAGTAAAAAAGAAAACTTAAGTATACAAGTGAAAAACTAAATGAAAAAAGAACTTTAAGCTTCGTTTTAAAAACAAAACTGTCATCAAAGGTGGCTTTCTTTTGTTGAAATATTTGCACTGAAGTATCGAATGGTTGTTGGATAACTTGGTGGGAAACCATAGGCATCTTTGCTTCACTGAAGAGAACATAATACGTGGAGTTGTATTGGTTGGAGTAGAGAAGTTGGAGAAATCTTCTACATTCGCGGCATTGAAGCGAACATGAAACATTTCTCAAAGGTTAAAAGGTGACTTGATAGGCTGGAAGACCATCAAGATTACAACCCAGTGCTGGTCTAAGCAGATCAAGTGCCCTCTCACATGTTTATATGCAATATCCACACTTACGACGTAGAATTCCTCGACCAAGGGGCTTATTTAACAATGACGTATATAAGTTATTGATCTGCCCAACAGTGGATCAGATCTTCTCATGAAAAACAGTTCCGTTTAATCCTGCTAACATTTATACCACTGATGCAATTACGGAAGTGCCCATTTTATCTATTCAATATTCCTTTGACTTAAAGATCATTGCAATACAAAGATCATTGCAATACCTAATATCGTTTCGACAAACTTTATCATTGCAATTGTGTTGGGTATTTGGGAAGTTAGAAAATTGAACAGTTTTTGGAGGATGTAGGCAATGAAGTAGGAAAGGTGTT ATGGATCGCAACGTCAAAGCAACAGCTTCCTTGCTCGAACGGGTTCTACTTACTTGCGCATCTCAGTGTTTTCTTAGATGGTTTTTGCTTTTCTCTTTTGGGAATGTTGGGGTTCGTGTTGCAGCAAAGGTTCCCAAAGTTGAACGTGATATGTGTTTGAAAGGATTTGTTGCTCTGAAATCTTGCATGCAAAATACGTCAAATTTAAGAAGTAAAAAAGAAAACTTAAGTATACAAGTGAAAAACTAA MDRNVKATASLLERVLLTCASQCFLRWFLLFSFGNVGVRVAAKVPKVERDMCLKGFVALKSCMQNTSNLRSKKENLSIQVKN Homology
BLAST of Sed0004834 vs. NCBI nr
Match: KAG6580793.1 (hypothetical protein SDJN03_20795, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 77.8 bits (190), Expect = 4.9e-11 Identity = 46/72 (63.89%), Postives = 50/72 (69.44%), Query Frame = 0
BLAST of Sed0004834 vs. NCBI nr
Match: KAE8651130.1 (hypothetical protein Csa_002376 [Cucumis sativus]) HSP 1 Score: 76.3 bits (186), Expect = 1.4e-10 Identity = 42/66 (63.64%), Postives = 47/66 (71.21%), Query Frame = 0
BLAST of Sed0004834 vs. NCBI nr
Match: XP_016899714.1 (PREDICTED: uncharacterized protein LOC107990619 [Cucumis melo]) HSP 1 Score: 74.7 bits (182), Expect = 4.1e-10 Identity = 44/72 (61.11%), Postives = 50/72 (69.44%), Query Frame = 0
BLAST of Sed0004834 vs. NCBI nr
Match: PRQ44425.1 (hypothetical protein RchiOBHm_Chr3g0479131 [Rosa chinensis]) HSP 1 Score: 62.8 bits (151), Expect = 1.6e-06 Identity = 37/67 (55.22%), Postives = 44/67 (65.67%), Query Frame = 0
BLAST of Sed0004834 vs. NCBI nr
Match: TYG83353.1 (hypothetical protein ES288_D01G161400v1 [Gossypium darwinii]) HSP 1 Score: 62.0 bits (149), Expect = 2.8e-06 Identity = 36/72 (50.00%), Postives = 43/72 (59.72%), Query Frame = 0
BLAST of Sed0004834 vs. ExPASy TrEMBL
Match: A0A0A0LB85 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G799640 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 6.8e-11 Identity = 45/72 (62.50%), Postives = 50/72 (69.44%), Query Frame = 0
BLAST of Sed0004834 vs. ExPASy TrEMBL
Match: A0A1S4DUQ7 (uncharacterized protein LOC107990619 OS=Cucumis melo OX=3656 GN=LOC107990619 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 2.0e-10 Identity = 44/72 (61.11%), Postives = 50/72 (69.44%), Query Frame = 0
BLAST of Sed0004834 vs. ExPASy TrEMBL
Match: A0A2P6RDE1 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr3g0479131 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 7.8e-07 Identity = 37/67 (55.22%), Postives = 44/67 (65.67%), Query Frame = 0
BLAST of Sed0004834 vs. ExPASy TrEMBL
Match: A0A5D2DQH9 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D01G161400v1 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 1.3e-06 Identity = 36/72 (50.00%), Postives = 43/72 (59.72%), Query Frame = 0
BLAST of Sed0004834 vs. ExPASy TrEMBL
Match: M5W8A2 (Mic1 domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_ppa001568mg PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 1.3e-06 Identity = 33/62 (53.23%), Postives = 42/62 (67.74%), Query Frame = 0
BLAST of Sed0004834 vs. TAIR 10
Match: AT3G12012.1 (conserved peptide upstream open reading frame 20 ) HSP 1 Score: 54.3 bits (129), Expect = 5.4e-08 Identity = 31/66 (46.97%), Postives = 39/66 (59.09%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|