Sed0004313 (gene) Chayote v1

Overview


Name	Sed0004313
Type	gene
Organism	Sechium edule (Chayote v1)
Description	regulation of nuclear pre-mRNA domain-containing protein 1B-like
Location	LG03: 3982910 .. 3991180 (-)
RNA-Seq Expression	Sed0004313
Synteny	Sed0004313

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTTGGGAAAATTTGAGAATTGTAAGACGCCAAGGCGAGCAAAGGAGGCGCAAGAGGAAGTCCGGTCCGGTCCGGTCCGAATCACAAAAAGTGGGAAAGCCGAAAGTAATCAGTTCCCAACCAGTTGCCACTCTCGCGCCGTTGTGCTCACCCAAAACCACCTCCACAATCCCTAAACCAAAACCACAATCGCTGTTCTTAAAAACCCCAATTTCCAAATCCCTAATTCCAAATTCCAAACTCCCCGATCTCTTTCATGGAGAAACGGCTCAATTTCGCCCCCTTGTAGTTGCCTTCTCTCTAACCCACATTCCCCTTTCACAGGTAATGTTTCCCCCCTTTCTTCTTCTTTCAATGGAAGCTCTAATTTGCTTGTGTTCCTTTCTTTTTTTACAAGTTCATAAAAATACTTGAGCTGTAAGATTTTCGTTGCAAACTTTCATAGTATCTCGCACTTATAGACTTGTATTTATTTTGCTCTTTGATTGACCCTCATTGAAGTTGGGAAAGAATTTAGTACCTAATCTAAAAAATTAGAATCTAGTTTCAATGATTTCGGTGAAAATTAGATATTCATGTGTCAATTATGTCAATGTCAGTCAAGTGATTGATTAGACAAAAACTTAGGCATCATTTAAGCATGGATAACAAACTCCACGTCGTTAGTGATTGCGAACGAGACTGTTTTTTAGGTTTATCAAACCACGAGGACTAAATTTTAATTTTTCTAAACCATAAAGACTAAATTATAATTTTTAAAATCATAAATCTAAATTTTAACTTTGATCATAACAAAAAAGAGATTTTTTTTTGAGAGGGAAAAAGAAAGTGCAATGCTACTACAATAAGAACATGCGTATATTATATAATTCATTTGTTCCGTTTTCATTAAACAATTTTCTCCTTACGCAGATTGACCTGCATTTTCTACGTTATTTCTGCTAAAAAGTTATCCAAATCAATGGGGGGTACATTCAATCCACAGATTTTGGTGGACAAGCTAGCCAGGCTCAACAACTCACAGGCCAGCATTGAGAGTATCCTCTTTGAAATTTGTTCTCTCTTTTGTCCAAGCTATGTTTTATGATTATTCTCTTCTTTTGACTAAATTACTTTCTTTTTTCTTATATTATAACTTATGAAGATTGATAGCTTTAATTCTTTTGGTTTGTTGATCGAGATTCGGTTTTATGAAATAGTTCTCGGACATGATATTTGGGTCTGTTTTTGTTTTCCTCCCACCTTTTCTTTGGCAATGTTATTTGGTTGAAGTTGGCACAATGTACTTGTTTAACTTTAGTTGTGTGCAATGAAATCCAATGCATGTGTAATGAATAACTTGTCACTGCCACATATTCGAAGATAGATTAATTTCCGTTAGTGTTTTAGTCCGGTAACATGAGCTCAACGGTAATTGGCACCTACTCCTCCCCTTAAGTTCGAAGGTTCGGTCGTGTTACTGTATCGGTCCTAGTGATGTTTCTTTGCATTTCTTTTCCAAGATGGGTTGTGGACGTATGTTCTCAATGTATCTTTTAGGGCTTATTGTGGTTTCTTTTCTCAGAGTTCCATCTTCTTTTCTATATGGTTTGGTACTGATACATGATACCCAATAATCCATTTATTGTATGCTTCTATGACTTTTACAATACATACATTCATGGAGAAGATAAGATTAAGGTAATTGGTTCTAGCCACTAGGCTAGGGCCCTAGGCAGTGATTGTTTCTAAGATTAAGGTTGTCTCTATGTTGTTTTGCAATTATTCTTTAGAGATCATTTTTTCTTGATTGAAGGGGTTCTGGAGGTTGTCCCTAGGTGTTTGCCTCATTTCTTGTCTATTTGGAATTTTGGATCATTAGTTCCATCCTTAATGTGATTAAGCTTTATCCCATTGGTGTATATTTCACATGAACAAAGCCAAGCAAGTTGTAGAAACATGGGATAAGCAGTTTCATTGTTCTCCAAGCGAGCAGAAATTGGCCTACTTGTATCTTGCTAATGACATTTTGCAGAACAGTAGGCGCAAAGGCTCAGAGTTCGTTGGTGAATTTTGGAAAGTCCTTCCCGGTGCACTTCGTCATGTAATTGAAAATGGGGATGATTTTGGAAGAAATGCTGCCCTACGACTGGTATATCAATAATCATTGCTTACTACGCATCCTTATCCTTTGTCAATTTTTTTCTCGTGGATAATTTTTTGTAAACTTCCATCTACTGCCCCTAAGAAAATATCTCATTAGATACTTTTTTTTTTTATAGGAAACAATACTTTTGATGAATGAAAAGTAGAAAGAAAGTGAAACCTATTGAAGCTATTAAAAAAGACAATTCCGAAACAAAAGGAGAAATAAAAACCACCAATAATGAATCAAAAGACCAAACAGTTACAAGTAAATGAAAACTATGAGTCACTATAGGATATATTGCACAATAGTTGAAGATCTCTTTCGTAATTCCCTTAGGGTTTGTCCTTCCTTGTAATTTGAAATTTCATATTTTAATGAAGTTGTTTCTTATCCAAAAAAATGAAAGGTATTCATAGATAAGTAAAAGGATAAATATAAGACCCTTTGTGAGGAGTGATGACAACTCTTGATCAGAGATCAAATTAGGGGCCTATAAAGGAACAAATCTTATATGGCAGAGATTTGTAAAAGAACAAATCTTGTATGAATATGTACATATCCAAATCCCCGTGGAGATAGTCGCCTAGGGGAACTAAGAGGTTTTGAGTTCAATCCATTGTGGCCACATATCTAAGAATTAGTTTTCTATTGGTTTCCTTGGAAACTAAATGTTGTAAGGTCAGGTACTAAATGTTGTAGGGCCAGTCACCTGTGAGAATAATTAAGGTGTGCATAAGTTGGCCCAAACACTTCAGAATTCTTATAATTCGCTAATTTTGATTGTTATTTTTAGACTCTGTTGCAGGTATGTTTTATTTAGACATATTTTAAATTTACTCACAGATTGGCATCTGGGAAGAGAGAAAAGTTTTTGGATCTCGAGGGCAAAGTCTTAAGGAAGAGATAATGGGAAAACATATGGAAACTAGTAATCGGAATGGGAAGCAATTCAACATTAAACTGGTAAAATATTACTCTTCCATCATGACTACCGAGTTGTTGCATTCATAAATTGTCTGGCCAAGTGACCATTCAGTCACCTATTTTCATTATTCTTACAACAGAAACAGTCTTCTAGCATATCATTGGATAAAATAGTTTCTGGTTACCAAGTTGTTCATGGAAGTGAGGTAGATGAAGATGTAGTATTAAGAAAATGCAGGAATTCTATTAGCTATCTGCAGAAATTGGACAAAGAAATTGGTGCTGAAGTCAATTCAGGTACTTGAAGAGCTTACATATTGTTGATTTGCTTCTAATTATTTTTACTGCATATTCTGTATGTTATAGAACCTTTTCCATTCTGAAGTTGGGGAACCTTATCAAGAGAGCTCATTAAGATCAACTTAATGAGCTGGAAATTTTGTTTGTTAATTAAAATGTAAAATGTTTTATTTACAACCTGGAATATACGTTAGGAAATTAGTTTGGAAACTTCTCTTCTGTAGATTGGTTAATGATTCCAGCTGTGTAAATAAAGCCTATATATTGATAAACCATTGTACTGTTGATCTTAAGGAAAATACACTTTACCAAAGTTTCTCTAGTTCTATTTTTCTTTGATGGTATCAAAGCTTTAAAGATCTCACAATCAGATCCTATTAACCTTTGGTGCAATATTTTCTTTTCGTTCCCTCCACCTGACGACCTCAGACTCAAATCACCAAGATTTTTTTTTTTTTTTTTTGAAAAAAAGATGAAAATGTTGGTTTTTGAGGCACCAAGCACGTGAATTATTGGAAAAAGGTATTTAGTACCTTCTTATTGTAGGCCGACAAATGGCTAACCATCTTTTCTCTCATGTAGTTTTACATTTGCTCCTAAATTATCTTATGAAGCAAACTCATGTGTGTTCTGTAATCTCAAGAGATTCTTACTCTCATTTATGTCGAGACGTTTTTGGAGGAGCTTCTTGTGTGAAAAATTTCAGTTTCCACACTCTGTTGGGCTGGTTGGGTTGCAAGAAACAAACGTCTCTTTGAATCATGAAGTGTAATTCAGGAAAAAATTGTATAACTTTTTTTTGTCCTATATATGTGAAGTTTGGCCTCCTCTAGAACACCCGTATTTTTCTAATTTTACCTTACGTTTTCTTCAAAAAAGGATTTTCATCCCTTTCTCTAATCAGAACACCCGTATTTTTTTTATAACCAACATATCGTGTGGTTCCTGTTCGAAGTACAACCTCTGGTTGTAGATTTAGATATGAAAACTGGAAAGTAAAAGGTAATTTGATGAAAACTGGAAAGTAAAAGTAAAAGGTAATTTAACTAACTTCCTGCTCTGCACTTTGGATGGGCATCCTTTTCAAAAATCTACTAAAGCTCTTTGGTTAAATTTTGTATTTGCTTTCTTATGGAATTGGTGGGGGGAGAGGAACAATTGGATTTTCAAAGATACTTTTAATTCCCTTGCTTCCCTCACTGAAGCAACATTACACACTCGAATCTCTTAGACTCATAGACATTCACCTTTTTGTAACTATGACCTATCTTTTCTATTTTCTCATTGGCAGCATCTTTTGTAATGTTTCTTTAGTCACCTCTGTAATATTCATTTATCAATGAAAGTTACCGTTTCCTATCAAAGAACAAATTTGATGATATTATTTATTATTTATTTATTTAAATTCTTTGGGTTGAATAACAAAAAAGAAATTATAATTTCAGAAAATTCCATGTCATCATCTGCCATTAGCAACTTACAAGACTTGTAATAGTCTTATGCAATGTATTATATATTAATGTGAAAAAAAGTGCTTTAGTTGTTTTGTTTGAGCTAAACTTAAATATTACTTGCGTTTTGTTCTTATTTTTAACTACACAGGGCAATACCATGGATCTTCTGTTGCAGAGGATCTGCAGGGAAATCATACCATTTTAAGGAACTGCATCGAACAATTAACTGTGATTGAAACGTCAAGGGCGAATCTCGTGTCTCATCTGAGAGAGGCTCTTCAAGAACAGGTATTTTGGCATCTTTTTGGGGAAAAGTTATTGTCATGAATATGATTATTGTGAGGTGAATCTGAAAACTTTTTAAACATAAATTTCTTATGTTCAGGAATTCAAATTGGAGCAAGTCCGAGACCAACTTCAGGTTTGCATTTCTGTTTCACAATGTCTTGGAGTATGGGGTCAGGTCACTGATTCTTCTTTATTTTTTCTAATTACTTGATTATTGTTGACCCCATATGAAATCTCTATTTGTTTTCCGGGATTGGTTCAATTCTAACATGGAACTAACATTTATAGTCTCAAGTTGAAACTCATGCCTAGTCTTTCTTTTCCATTTAAAAATTCATACTTAACAGTTAACCAAACCTTGATAGTGATAGGAACTTAATCCTATGACACGGGTTTTCGCATTACTATTATTTGATCGAACCATAATGAATATATGAGTAAGTTGATATAATCAAGCAAGATTGTACGGATTATTCAATTCATTCCCTATTTGTGGATTGGGAAACAAAAAGCTTTGTGCTAGTTTGAAGGAGTGGAAAAATAAAAAATAAAAGTCAAGGTCCTTCCCTCTTTTAAGAAAAAGTGTAAAAGATTCTAGTTTTAAGTCCTCTTTTGATTATCATTTTGGTAATTTGGTTTTTCTGTTTGTAGAAAACAATAACCACATGTTTGGTAACAGTTTCTATTTTTCTGTTTATTTTAAAAACAAAAAACTAAACATGTTTAACAACCGTCTTTAGTTTATTGTTTTTTAAAAACAGAATAAACTGCTGTAACCTATTTTTAGTGATATATATCTTTCAGAATCGGCTCCTAAGTTTTTATTTTTATTTATAATTTTTACCAAACATACTATAATTGTAAAACTATACACACACACAAACATATATATATATATAATGAAAAGCATAAGATGCTCATAAAACTATTAAAGTGTTCTAAATGATATATTTATGGCTACTGCTTTAACAATCTTGGAGGATGTAATCATGAATATTATACTTTGCCCCAAGTGAGTCATACCACCACTTGAAGACAAATGTCAAGAGGCATGATATCAGTCCTTTTGGTTGAAGAGGAAGATTGGCGACAACCTATCGTAGAGTATCCACTATCCAGCTTTCCATAGATATGTTGGTATATAAGGAAGGGCTTCCCGATTCATCTATTAAAATGAGATATTTTATCAAGGGCTCTTCCTTCAATATTTAGGAAAGGAGTCGCGTGAAGCATTGGTGGAGGTGCATGCAGGTGTTTGTGGGGCTCACTAGTTGGGCCAAAAATTCTATTTTCAGTTAAAAAGGATAGTTATGAGAGAAAGCAATTAGTGGATTATATAATAGAGACTATAACATTGTTTCAAAATTCAATATCAACTTGGAGGTTCCCAAAACTTGGAGAATTGCCTCATCAATCTTATTTGGAAAAATCCAATATAGCCCAGCCCCAAAGTAGTTCAACATTTTAGCCCATAAAAATCGAGTTGTGGGGGACAAAAAGAGCAGATGGTGCTGGTCTTCATTAATTTTGCTAGGAAACACGGTCAAGGATATGTGTTGTTCACGTGTTAGAGCGAAATTTTGTGTCCCTTTATTATTATTTTTTAATTTTGGGCACGTCACAGACGCACTAGGACATTGTCACGGACACACTAGGACACTTCACGAACACGCCATTTGAAACTAATACTTTTCAAGTGGCTAAATGACACAACAGCGAGGCCATGCTGATGGAGGCTGTCGGTGGCAAAATTCATCGAAGGTAGATGGACAAAAATGGAAAAGGTAGCAAAAAGAGAAAATAGAATGGAGACATGGAAAGGAGGAAAAATCAAAATATTTTAAGATGGTTAAGGGTCAGGTTTTCTTATAAATTTTATTTTGTGAGCTTTTAGTAGGCGTTTAAATCCATTTTGAATACCATTTTTGCTTGGCTTTCCATTTTTCTTATGTGTTGGTAGGTCAACCCCTGCAGAAACCTAAGAATTAGTGGCATGGCCAGACAAGGAATGTTTGTATCTTTTTTTAACTCGTGTGTTTTTTGGCAGGCTTCCCATTCTCAGTCAGAACAAACTCAGAATCTCTGCCGTCAGTTCTTTAATGGTGAAAATGTGCAACCTATGGCTGGGGAGGCCTCAAAAGATGCTCAGACCTCGATATCCCCACACCGACTTGTACCGAGGGAGAGAGAGCAATCAGTGCCAGTGATGTATGCAGGCTCACTACCATTTCCTGCAAAACCTGGACCTATTGAGGAAGATCCCCGCAAGTCTGCTGCTGCTGCTGTCGCAGCAAAGCTAACTGCATCGACATCCTCGGTTCAGGTGCTCTCTTACGTCCTATCTTCCCTGGCTTCAGAGGGCGTAATTGGAAATCCAAATAAAGAGTTATCTGGTGATTATCCACCTGAGAAGAGGACCAAGCTTGAAAATGACCCGTCACCCTACACATTGCCTCCGAATCCACAGCGGCCACCTATCTCTTCCTTCCCACACCCGGAGTCTCTCCAACATAATGCCTCATCCACTAGTCAACAATACACGCCTACCGACCCGCCACCTCCCCCATCATCATCTCCACCGCCGATGCCTCCATTACCTCCTGCAGGGCAGTTCCCTTTGCCCCAGTTCCCACAGAATGCTGGTTCAGTAAGTATCATACCTTACGGTTACAGTATGACACAACCAATGCCACCATTAGCTATGTCTGGCTATCCAAATGTCGGTGCCCCGGTGACTGGGATGTCTCCGTTTACGATACAACCAAATTCCTACCAGAGTTTTCAGGCTTCAGATGGTAATTTCTATAATCAGTCTTCATCAATGCCAATGGCGCCAATTTCTAGGCAGTAGAGCTATGTAATACTTGTGCTAACAAATCTTTTCAGGAAGTGGTGCATCCCATTAAGGCCGACGAGGAAATCTTGTTTCTTCATATGCTCCGTAAGTTCTGACGACTTAACTAAAGGGATTTTCCACATAGTATAGTTTGTAATTTTATGTGCTTGGAGTCTCAAATGATATTCGTCTAGCTGAATGTAGAAGTATGATAATAATGTTGACTTTTTAGCTTTTGCATATAGTATGAGTTTGTAATTTAACTTCATTTATTAACGATATGCTTGGATGTCTGGATCGGAACTTCATCTGGTTGAATGAAGTCTGATGTTATTGTTTTT

mRNA sequence

ACTTGGGAAAATTTGAGAATTGTAAGACGCCAAGGCGAGCAAAGGAGGCGCAAGAGGAAGTCCGGTCCGGTCCGGTCCGAATCACAAAAAGTGGGAAAGCCGAAAGTAATCAGTTCCCAACCAGTTGCCACTCTCGCGCCGTTGTGCTCACCCAAAACCACCTCCACAATCCCTAAACCAAAACCACAATCGCTGTTCTTAAAAACCCCAATTTCCAAATCCCTAATTCCAAATTCCAAACTCCCCGATCTCTTTCATGGAGAAACGGCTCAATTTCGCCCCCTTGTAGTTGCCTTCTCTCTAACCCACATTCCCCTTTCACAGATTGACCTGCATTTTCTACGTTATTTCTGCTAAAAAGTTATCCAAATCAATGGGGGGTACATTCAATCCACAGATTTTGGTGGACAAGCTAGCCAGGCTCAACAACTCACAGGCCAGCATTGAGACTTTATCCCATTGGTGTATATTTCACATGAACAAAGCCAAGCAAGTTGTAGAAACATGGGATAAGCAGTTTCATTGTTCTCCAAGCGAGCAGAAATTGGCCTACTTGTATCTTGCTAATGACATTTTGCAGAACAGTAGGCGCAAAGGCTCAGAGTTCGTTGGTGAATTTTGGAAAGTCCTTCCCGGTGCACTTCGTCATGTAATTGAAAATGGGGATGATTTTGGAAGAAATGCTGCCCTACGACTGATTGGCATCTGGGAAGAGAGAAAAGTTTTTGGATCTCGAGGGCAAAGTCTTAAGGAAGAGATAATGGGAAAACATATGGAAACTAGTAATCGGAATGGGAAGCAATTCAACATTAAACTGAAACAGTCTTCTAGCATATCATTGGATAAAATAGTTTCTGGTTACCAAGTTGTTCATGGAAGTGAGGTAGATGAAGATGTAGTATTAAGAAAATGCAGGAATTCTATTAGCTATCTGCAGAAATTGGACAAAGAAATTGGTGCTGAAGTCAATTCAGGGCAATACCATGGATCTTCTGTTGCAGAGGATCTGCAGGGAAATCATACCATTTTAAGGAACTGCATCGAACAATTAACTGTGATTGAAACGTCAAGGGCGAATCTCGTGTCTCATCTGAGAGAGGCTCTTCAAGAACAGGAATTCAAATTGGAGCAAGTCCGAGACCAACTTCAGGCTTCCCATTCTCAGTCAGAACAAACTCAGAATCTCTGCCGTCAGTTCTTTAATGGTGAAAATGTGCAACCTATGGCTGGGGAGGCCTCAAAAGATGCTCAGACCTCGATATCCCCACACCGACTTGTACCGAGGGAGAGAGAGCAATCAGTGCCAGTGATGTATGCAGGCTCACTACCATTTCCTGCAAAACCTGGACCTATTGAGGAAGATCCCCGCAAGTCTGCTGCTGCTGCTGTCGCAGCAAAGCTAACTGCATCGACATCCTCGGTTCAGGTGCTCTCTTACGTCCTATCTTCCCTGGCTTCAGAGGGCGTAATTGGAAATCCAAATAAAGAGTTATCTGGTGATTATCCACCTGAGAAGAGGACCAAGCTTGAAAATGACCCGTCACCCTACACATTGCCTCCGAATCCACAGCGGCCACCTATCTCTTCCTTCCCACACCCGGAGTCTCTCCAACATAATGCCTCATCCACTAGTCAACAATACACGCCTACCGACCCGCCACCTCCCCCATCATCATCTCCACCGCCGATGCCTCCATTACCTCCTGCAGGGCAGTTCCCTTTGCCCCAGTTCCCACAGAATGCTGGTTCAGTAAGTATCATACCTTACGGTTACAGTATGACACAACCAATGCCACCATTAGCTATGTCTGGCTATCCAAATGTCGGTGCCCCGGTGACTGGGATGTCTCCGTTTACGATACAACCAAATTCCTACCAGAGTTTTCAGGCTTCAGATGGTAATTTCTATAATCAGTCTTCATCAATGCCAATGGCGCCAATTTCTAGGCAGTAGAGCTATGTAATACTTGTGCTAACAAATCTTTTCAGGAAGTGGTGCATCCCATTAAGGCCGACGAGGAAATCTTGTTTCTTCATATGCTCCGTAAGTTCTGACGACTTAACTAAAGGGATTTTCCACATAGTATAGTTTGTAATTTTATGTGCTTGGAGTCTCAAATGATATTCGTCTAGCTGAATGTAGAAGTATGATAATAATGTTGACTTTTTAGCTTTTGCATATAGTATGAGTTTGTAATTTAACTTCATTTATTAACGATATGCTTGGATGTCTGGATCGGAACTTCATCTGGTTGAATGAAGTCTGATGTTATTGTTTTT

Coding sequence (CDS)

ATGGGGGGTACATTCAATCCACAGATTTTGGTGGACAAGCTAGCCAGGCTCAACAACTCACAGGCCAGCATTGAGACTTTATCCCATTGGTGTATATTTCACATGAACAAAGCCAAGCAAGTTGTAGAAACATGGGATAAGCAGTTTCATTGTTCTCCAAGCGAGCAGAAATTGGCCTACTTGTATCTTGCTAATGACATTTTGCAGAACAGTAGGCGCAAAGGCTCAGAGTTCGTTGGTGAATTTTGGAAAGTCCTTCCCGGTGCACTTCGTCATGTAATTGAAAATGGGGATGATTTTGGAAGAAATGCTGCCCTACGACTGATTGGCATCTGGGAAGAGAGAAAAGTTTTTGGATCTCGAGGGCAAAGTCTTAAGGAAGAGATAATGGGAAAACATATGGAAACTAGTAATCGGAATGGGAAGCAATTCAACATTAAACTGAAACAGTCTTCTAGCATATCATTGGATAAAATAGTTTCTGGTTACCAAGTTGTTCATGGAAGTGAGGTAGATGAAGATGTAGTATTAAGAAAATGCAGGAATTCTATTAGCTATCTGCAGAAATTGGACAAAGAAATTGGTGCTGAAGTCAATTCAGGGCAATACCATGGATCTTCTGTTGCAGAGGATCTGCAGGGAAATCATACCATTTTAAGGAACTGCATCGAACAATTAACTGTGATTGAAACGTCAAGGGCGAATCTCGTGTCTCATCTGAGAGAGGCTCTTCAAGAACAGGAATTCAAATTGGAGCAAGTCCGAGACCAACTTCAGGCTTCCCATTCTCAGTCAGAACAAACTCAGAATCTCTGCCGTCAGTTCTTTAATGGTGAAAATGTGCAACCTATGGCTGGGGAGGCCTCAAAAGATGCTCAGACCTCGATATCCCCACACCGACTTGTACCGAGGGAGAGAGAGCAATCAGTGCCAGTGATGTATGCAGGCTCACTACCATTTCCTGCAAAACCTGGACCTATTGAGGAAGATCCCCGCAAGTCTGCTGCTGCTGCTGTCGCAGCAAAGCTAACTGCATCGACATCCTCGGTTCAGGTGCTCTCTTACGTCCTATCTTCCCTGGCTTCAGAGGGCGTAATTGGAAATCCAAATAAAGAGTTATCTGGTGATTATCCACCTGAGAAGAGGACCAAGCTTGAAAATGACCCGTCACCCTACACATTGCCTCCGAATCCACAGCGGCCACCTATCTCTTCCTTCCCACACCCGGAGTCTCTCCAACATAATGCCTCATCCACTAGTCAACAATACACGCCTACCGACCCGCCACCTCCCCCATCATCATCTCCACCGCCGATGCCTCCATTACCTCCTGCAGGGCAGTTCCCTTTGCCCCAGTTCCCACAGAATGCTGGTTCAGTAAGTATCATACCTTACGGTTACAGTATGACACAACCAATGCCACCATTAGCTATGTCTGGCTATCCAAATGTCGGTGCCCCGGTGACTGGGATGTCTCCGTTTACGATACAACCAAATTCCTACCAGAGTTTTCAGGCTTCAGATGGTAATTTCTATAATCAGTCTTCATCAATGCCAATGGCGCCAATTTCTAGGCAGTAG

Protein sequence

MGGTFNPQILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPSEQKLAYLYLANDILQNSRRKGSEFVGEFWKVLPGALRHVIENGDDFGRNAALRLIGIWEERKVFGSRGQSLKEEIMGKHMETSNRNGKQFNIKLKQSSSISLDKIVSGYQVVHGSEVDEDVVLRKCRNSISYLQKLDKEIGAEVNSGQYHGSSVAEDLQGNHTILRNCIEQLTVIETSRANLVSHLREALQEQEFKLEQVRDQLQASHSQSEQTQNLCRQFFNGENVQPMAGEASKDAQTSISPHRLVPREREQSVPVMYAGSLPFPAKPGPIEEDPRKSAAAAVAAKLTASTSSVQVLSYVLSSLASEGVIGNPNKELSGDYPPEKRTKLENDPSPYTLPPNPQRPPISSFPHPESLQHNASSTSQQYTPTDPPPPPSSSPPPMPPLPPAGQFPLPQFPQNAGSVSIIPYGYSMTQPMPPLAMSGYPNVGAPVTGMSPFTIQPNSYQSFQASDGNFYNQSSSMPMAPISRQ

Homology

[Close]

BLAST of Sed0004313 vs. NCBI nr
Match: XP_022152479.1 (UPF0400 protein C337.03 [Momordica charantia] >XP_022152481.1 UPF0400 protein C337.03 [Momordica charantia])

HSP 1 Score: 909.1 bits (2348), Expect = 1.8e-260
Identity = 465/526 (88.40%), Postives = 491/526 (93.35%), Query Frame = 0


Query: 1   MGGTFNPQILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPSEQKLAY 60
           MGGTFN  ILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHC+P EQ+LAY
Sbjct: 1   MGGTFNAHILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCAPREQRLAY 60

Query: 61  LYLANDILQNSRRKGSEFVGEFWKVLPGALRHVIENGDDFGRNAALRLIGIWEERKVFGS 120
           LYLANDILQNSRRKGSEFVGEFWKVLP ALR VIENGDDFGRNAALRLIGIWEERKVFGS
Sbjct: 61  LYLANDILQNSRRKGSEFVGEFWKVLPDALRDVIENGDDFGRNAALRLIGIWEERKVFGS 120

Query: 121 RGQSLKEEIMGKHMETSNRNGKQFNIKLKQSSSISLDKIVSGYQVVHGSEVDEDVVLRKC 180
           RGQSLKEEIMGKH+ET NRNGKQF++KLKQS+S SLDKIV+GYQVV+G+E+DEDVVL KC
Sbjct: 121 RGQSLKEEIMGKHVETGNRNGKQFSVKLKQSTSTSLDKIVAGYQVVYGTEIDEDVVLSKC 180

Query: 181 RNSISYLQKLDKEIGAEVNSGQYHGSSVAEDLQGNHTILRNCIEQLTVIETSRANLVSHL 240
           RNSISYL+KLDKEIGA+VNSGQYHGSSV+EDLQ +HTILR CIEQLT IE+SRANLVSHL
Sbjct: 181 RNSISYLEKLDKEIGADVNSGQYHGSSVSEDLQRHHTILRGCIEQLTAIESSRANLVSHL 240

Query: 241 REALQEQEFKLEQVRDQLQASHSQSEQTQNLCRQFFNGENVQPMAGEASKDAQTSISPHR 300
           REALQEQEFKL++VR+QLQASHSQSEQTQNL RQF NGENVQPMA EASKDAQTSI+PH 
Sbjct: 241 REALQEQEFKLDEVRNQLQASHSQSEQTQNLSRQFLNGENVQPMAEEASKDAQTSIAPHS 300

Query: 301 LVPREREQSVPVMYAGSLPFPAKPGPIEEDPRKSAAAAVAAKLTASTSSVQVLSYVLSSL 360
           LVPREREQS PVMYA SLPFPAKPGP EEDPRKSAAAAVAAKLTASTSSVQ+LSYVLSSL
Sbjct: 301 LVPREREQSAPVMYAASLPFPAKPGPNEEDPRKSAAAAVAAKLTASTSSVQMLSYVLSSL 360

Query: 361 ASEGVIGNPNKELSGDYPPEKRTKLENDPSPYTLPPNPQRPPISSFPHPESLQHNASSTS 420
           ASEGVIGNP KE S DYP EKR KLEND  PYTLPPNPQRPP+SSFPHPESLQHNASSTS
Sbjct: 361 ASEGVIGNPIKESSSDYPSEKRPKLENDQPPYTLPPNPQRPPVSSFPHPESLQHNASSTS 420

Query: 421 QQYTPTDPPPPPSSSPPPMPPLPPAGQFPLPQFPQNAGSVSIIPYGYSMTQPMPPLAMSG 480
           QQYTPTDPPPPPSSSPPPMPPLPP  QFPLPQF QNAGSVS +PY YS+TQP+ PLAM G
Sbjct: 421 QQYTPTDPPPPPSSSPPPMPPLPPVVQFPLPQFTQNAGSVSSVPYSYSLTQPLQPLAMPG 480

Query: 481 YPNVGAPVTGMSPFTIQPNSYQSFQASDGNFYNQSSSMPMAPISRQ 527
           YPNVG PVTGMSPFTI  NSYQ+FQASDGNFYNQSSSMPMAP+SRQ
Sbjct: 481 YPNVGTPVTGMSPFTIPTNSYQNFQASDGNFYNQSSSMPMAPMSRQ 526

[Close]

BLAST of Sed0004313 vs. NCBI nr
Match: XP_038884747.1 (UPF0400 protein C337.03 [Benincasa hispida] >XP_038884750.1 UPF0400 protein C337.03 [Benincasa hispida])

HSP 1 Score: 906.0 bits (2340), Expect = 1.5e-259
Identity = 462/526 (87.83%), Postives = 489/526 (92.97%), Query Frame = 0


Query: 1   MGGTFNPQILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPSEQKLAY 60
           MGGTFNPQILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSP EQ+LAY
Sbjct: 1   MGGTFNPQILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAY 60

Query: 61  LYLANDILQNSRRKGSEFVGEFWKVLPGALRHVIENGDDFGRNAALRLIGIWEERKVFGS 120
           LYLANDILQNSRRKGSEFVGEFWKVLP ALR VI NGD+FGRNAALRLIGIWEERKVFGS
Sbjct: 61  LYLANDILQNSRRKGSEFVGEFWKVLPDALRDVIGNGDEFGRNAALRLIGIWEERKVFGS 120

Query: 121 RGQSLKEEIMGKHMETSNRNGKQFNIKLKQSSSISLDKIVSGYQVVHGSEVDEDVVLRKC 180
           RGQSLKEEIMGKH+ET +RNGK F+ KLKQS+S+SLDKIVSGYQVV+G+E+DED VL KC
Sbjct: 121 RGQSLKEEIMGKHLETGSRNGKPFSSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKC 180

Query: 181 RNSISYLQKLDKEIGAEVNSGQYHGSSVAEDLQGNHTILRNCIEQLTVIETSRANLVSHL 240
           RNSISYL+KLDKEIG +VNSGQY GSS+A+DL+G+HTILR+CIEQLT IETSRA+LVSHL
Sbjct: 181 RNSISYLEKLDKEIGTDVNSGQYRGSSIADDLRGHHTILRDCIEQLTSIETSRASLVSHL 240

Query: 241 REALQEQEFKLEQVRDQLQASHSQSEQTQNLCRQFFNGENVQPMAGEASKDAQTSISPHR 300
           REALQEQEFKLEQVR+QLQASHSQSEQTQNLCRQF NGENVQPM  EASKDAQTSI+PH 
Sbjct: 241 REALQEQEFKLEQVRNQLQASHSQSEQTQNLCRQFLNGENVQPMTEEASKDAQTSIAPHS 300

Query: 301 LVPREREQSVPVMYAGSLPFPAKPGPIEEDPRKSAAAAVAAKLTASTSSVQVLSYVLSSL 360
           LVPR+REQS PVMYAGSLPFP KPGP EEDPRKSAAAAVAAKLTASTSSVQ+LSYVLSSL
Sbjct: 301 LVPRDREQSAPVMYAGSLPFPTKPGPSEEDPRKSAAAAVAAKLTASTSSVQMLSYVLSSL 360

Query: 361 ASEGVIGNPNKELSGDYPPEKRTKLENDPSPYTLPPNPQRPPISSFPHPESLQHNASSTS 420
           ASEGVIGNPNKEL GDYP EKR KLEND  PYTLPPNPQRPP+SSFPHPESLQ N SSTS
Sbjct: 361 ASEGVIGNPNKELPGDYPSEKRPKLENDQLPYTLPPNPQRPPVSSFPHPESLQLNTSSTS 420

Query: 421 QQYTPTDPPPPPSSSPPPMPPLPPAGQFPLPQFPQNAGSVSIIPYGYSMTQPMPPLAMSG 480
           QQYTP+DPPPPPSSSPPPMPPLPP  QFP+PQF QN GSVS IPY YSMTQ +PPLAM G
Sbjct: 421 QQYTPSDPPPPPSSSPPPMPPLPPVAQFPVPQFTQNVGSVSSIPYSYSMTQSLPPLAMPG 480

Query: 481 YPNVGAPVTGMSPFTIQPNSYQSFQASDGNFYNQSSSMPMAPISRQ 527
           YPNVGAPVTG+SPFTI  NSYQSFQA DGNFYNQSSSMPMAPISRQ
Sbjct: 481 YPNVGAPVTGLSPFTIPTNSYQSFQAPDGNFYNQSSSMPMAPISRQ 526

[Close]

BLAST of Sed0004313 vs. NCBI nr
Match: XP_008441251.1 (PREDICTED: UPF0400 protein C337.03 isoform X1 [Cucumis melo])

HSP 1 Score: 905.2 bits (2338), Expect = 2.6e-259
Identity = 462/528 (87.50%), Postives = 488/528 (92.42%), Query Frame = 0


Query: 1   MGGTFNPQILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPSEQKLAY 60
           MGGTFNPQILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSP EQ+LAY
Sbjct: 1   MGGTFNPQILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAY 60

Query: 61  LYLANDILQNSRRKGSEFVGEFWKVLPGALRHVIENGDDFGRNAALRLIGIWEERKVFGS 120
           LYLANDILQNSRRKGSEFVGEFWKVLP ALR VI NGD+FGRNAALRLIGIWEERKVFGS
Sbjct: 61  LYLANDILQNSRRKGSEFVGEFWKVLPDALRDVIGNGDEFGRNAALRLIGIWEERKVFGS 120

Query: 121 RGQSLKEEIMGKHMETSNRNGKQFNIKLKQSSSISLDKIVSGYQVVHGSEVDEDVVLRKC 180
           RGQSLKEEIMGKH+ET NRNGK FN KLKQS+S+SLDKIVSGYQVV+G E+DED VL KC
Sbjct: 121 RGQSLKEEIMGKHLETGNRNGKPFNSKLKQSASVSLDKIVSGYQVVYGKEIDEDAVLSKC 180

Query: 181 RNSISYLQKLDKEIGAEVNSGQYHGSSVAEDLQGNHTILRNCIEQLTVIETSRANLVSHL 240
           RNSISYL+KLDKEIGA+VNSGQY GSS+A+DL+G+HTILR+CIEQLT IETSRA+LVSHL
Sbjct: 181 RNSISYLEKLDKEIGADVNSGQYRGSSIADDLRGHHTILRDCIEQLTTIETSRASLVSHL 240

Query: 241 REALQEQEFKLEQVRDQLQASHSQSEQTQNLCRQFFNGENVQPMAGEASKDAQTSISPHR 300
           REALQEQEFKLEQVR+QLQASHSQSEQTQNLCRQF NGENVQPM  E SKDAQTS++PH 
Sbjct: 241 REALQEQEFKLEQVRNQLQASHSQSEQTQNLCRQFLNGENVQPMTEEGSKDAQTSVAPHS 300

Query: 301 LVPREREQSVPVMYAGSLPFPAKPGPIEEDPRKSAAAAVAAKLTASTSSVQVLSYVLSSL 360
           LVPREREQS PVMYA S+PFP+KPGP EEDPRKSAAAAVAAKLTASTSSVQ+LSYVLSSL
Sbjct: 301 LVPREREQSAPVMYAASVPFPSKPGPSEEDPRKSAAAAVAAKLTASTSSVQMLSYVLSSL 360

Query: 361 ASEGVIGNPNKELSGDYPPEKRTKLENDPSPYTLPPNPQRPPISSFPHPESLQHNASSTS 420
           ASEGVIGNPNK+L GDYP EKR KLEND  PY LPPNPQRPP+SSFPHPESLQHN SSTS
Sbjct: 361 ASEGVIGNPNKDLPGDYPSEKRPKLENDQLPYALPPNPQRPPVSSFPHPESLQHNTSSTS 420

Query: 421 QQYTPTDPPPPPSSSPPPMPPLPPAGQFPLPQFPQNAGSVSI--IPYGYSMTQPMPPLAM 480
           QQYTP+DPPPPPSSSPPPMPPLPP  QFPLPQF QNAGSVS   IPY YSMTQ +PPLAM
Sbjct: 421 QQYTPSDPPPPPSSSPPPMPPLPPVAQFPLPQFTQNAGSVSSIPIPYSYSMTQSLPPLAM 480

Query: 481 SGYPNVGAPVTGMSPFTIQPNSYQSFQASDGNFYNQSSSMPMAPISRQ 527
            GYPN GAPVTGMSPFTI  NSYQ+FQA DGNFYNQSSSMPMAPISRQ
Sbjct: 481 PGYPNAGAPVTGMSPFTIPTNSYQNFQAPDGNFYNQSSSMPMAPISRQ 528

[Close]

BLAST of Sed0004313 vs. NCBI nr
Match: XP_004138638.1 (UPF0400 protein C337.03 [Cucumis sativus] >XP_031737380.1 UPF0400 protein C337.03 [Cucumis sativus] >KGN63123.1 hypothetical protein Csa_021963 [Cucumis sativus])

HSP 1 Score: 894.0 bits (2309), Expect = 6.0e-256
Identity = 457/528 (86.55%), Postives = 487/528 (92.23%), Query Frame = 0


Query: 1   MGGTFNPQILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPSEQKLAY 60
           MGGTFNPQILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSP EQ+LAY
Sbjct: 1   MGGTFNPQILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAY 60

Query: 61  LYLANDILQNSRRKGSEFVGEFWKVLPGALRHVIENGDDFGRNAALRLIGIWEERKVFGS 120
           LYLANDILQNSRRKGSEFVGEFWKVLP ALR VI NGD+FGRNAALRLIGIWEERKVFGS
Sbjct: 61  LYLANDILQNSRRKGSEFVGEFWKVLPDALRDVIGNGDEFGRNAALRLIGIWEERKVFGS 120

Query: 121 RGQSLKEEIMGKHMETSNRNGKQFNIKLKQSSSISLDKIVSGYQVVHGSEVDEDVVLRKC 180
           RGQSLKEEIMGKH+ET NRNGK FN KLKQS+S+SLDKIVSGYQVV+G E+DED VL KC
Sbjct: 121 RGQSLKEEIMGKHLETGNRNGKPFNSKLKQSASVSLDKIVSGYQVVYGKEIDEDAVLSKC 180

Query: 181 RNSISYLQKLDKEIGAEVNSGQYHGSSVAEDLQGNHTILRNCIEQLTVIETSRANLVSHL 240
           RNSISYL+KLDKEIG +VNSGQY GSS+A+DL+G+H+ILR+CIEQLT IETSRA+LVSHL
Sbjct: 181 RNSISYLEKLDKEIGNDVNSGQYRGSSIADDLRGHHSILRDCIEQLTTIETSRASLVSHL 240

Query: 241 REALQEQEFKLEQVRDQLQASHSQSEQTQNLCRQFFNGENVQPMAGEASKDAQTSISPHR 300
           REALQEQEFKLEQVR+QLQASHSQSEQTQNLCRQF NGENVQPM  E SKDAQTS++PH 
Sbjct: 241 REALQEQEFKLEQVRNQLQASHSQSEQTQNLCRQFLNGENVQPMTEEGSKDAQTSVAPHS 300

Query: 301 LVPREREQSVPVMYAGSLPFPAKPGPIEEDPRKSAAAAVAAKLTASTSSVQVLSYVLSSL 360
           LV REREQS PVMYA S+PFP+KPGP EEDPRKSAAAAVAAKLTASTSSVQ+LSYVLSSL
Sbjct: 301 LVSREREQSAPVMYAASVPFPSKPGPNEEDPRKSAAAAVAAKLTASTSSVQMLSYVLSSL 360

Query: 361 ASEGVIGNPNKELSGDYPPEKRTKLENDPSPYTLPPNPQRPPISSFPHPESLQHNASSTS 420
           ASEGVIGNPNK+L GDYP EKR KLEND  PY LPPNPQRPP+SSFPHPESLQHN+SSTS
Sbjct: 361 ASEGVIGNPNKDLPGDYPSEKRPKLENDQLPYPLPPNPQRPPVSSFPHPESLQHNSSSTS 420

Query: 421 QQYTPTDPPPPPSSSPPPMPPLPPAGQFPLPQFPQNAGSVSI--IPYGYSMTQPMPPLAM 480
           QQYTP+DPPPPPSSSPPPMPPLPP  QFPLPQF QNAGSVS   IPY YSMTQ +PPLAM
Sbjct: 421 QQYTPSDPPPPPSSSPPPMPPLPPVAQFPLPQFTQNAGSVSSIPIPYSYSMTQSLPPLAM 480

Query: 481 SGYPNVGAPVTGMSPFTIQPNSYQSFQASDGNFYNQSSSMPMAPISRQ 527
            GYPN GAPVTGMSPFTI  NSYQ+FQA DG+FY+QSSSMPMAPISRQ
Sbjct: 481 PGYPNAGAPVTGMSPFTIPTNSYQNFQAPDGSFYSQSSSMPMAPISRQ 528

[Close]

BLAST of Sed0004313 vs. NCBI nr
Match: XP_008441252.1 (PREDICTED: UPF0400 protein C337.03 isoform X2 [Cucumis melo])

HSP 1 Score: 882.5 bits (2279), Expect = 1.8e-252
Identity = 455/528 (86.17%), Postives = 480/528 (90.91%), Query Frame = 0


Query: 1   MGGTFNPQILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPSEQKLAY 60
           MGGTFNPQILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSP EQ+LAY
Sbjct: 1   MGGTFNPQILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAY 60

Query: 61  LYLANDILQNSRRKGSEFVGEFWKVLPGALRHVIENGDDFGRNAALRLIGIWEERKVFGS 120
           LYLANDILQNSRRKGSEFVGEFWKVLP ALR VI NGD+FGRNAALRLIGIWEERKVFGS
Sbjct: 61  LYLANDILQNSRRKGSEFVGEFWKVLPDALRDVIGNGDEFGRNAALRLIGIWEERKVFGS 120

Query: 121 RGQSLKEEIMGKHMETSNRNGKQFNIKLKQSSSISLDKIVSGYQVVHGSEVDEDVVLRKC 180
           RGQSLKEEIMGKH+ET NRNGK FN KLKQS+S+SLDKIVSGYQVV+G E+DED VL KC
Sbjct: 121 RGQSLKEEIMGKHLETGNRNGKPFNSKLKQSASVSLDKIVSGYQVVYGKEIDEDAVLSKC 180

Query: 181 RNSISYLQKLDKEIGAEVNSGQYHGSSVAEDLQGNHTILRNCIEQLTVIETSRANLVSHL 240
           RNSISYL+KLDKEIGA+VNS         +DL+G+HTILR+CIEQLT IETSRA+LVSHL
Sbjct: 181 RNSISYLEKLDKEIGADVNS---------DDLRGHHTILRDCIEQLTTIETSRASLVSHL 240

Query: 241 REALQEQEFKLEQVRDQLQASHSQSEQTQNLCRQFFNGENVQPMAGEASKDAQTSISPHR 300
           REALQEQEFKLEQVR+QLQASHSQSEQTQNLCRQF NGENVQPM  E SKDAQTS++PH 
Sbjct: 241 REALQEQEFKLEQVRNQLQASHSQSEQTQNLCRQFLNGENVQPMTEEGSKDAQTSVAPHS 300

Query: 301 LVPREREQSVPVMYAGSLPFPAKPGPIEEDPRKSAAAAVAAKLTASTSSVQVLSYVLSSL 360
           LVPREREQS PVMYA S+PFP+KPGP EEDPRKSAAAAVAAKLTASTSSVQ+LSYVLSSL
Sbjct: 301 LVPREREQSAPVMYAASVPFPSKPGPSEEDPRKSAAAAVAAKLTASTSSVQMLSYVLSSL 360

Query: 361 ASEGVIGNPNKELSGDYPPEKRTKLENDPSPYTLPPNPQRPPISSFPHPESLQHNASSTS 420
           ASEGVIGNPNK+L GDYP EKR KLEND  PY LPPNPQRPP+SSFPHPESLQHN SSTS
Sbjct: 361 ASEGVIGNPNKDLPGDYPSEKRPKLENDQLPYALPPNPQRPPVSSFPHPESLQHNTSSTS 420

Query: 421 QQYTPTDPPPPPSSSPPPMPPLPPAGQFPLPQFPQNAGSVSI--IPYGYSMTQPMPPLAM 480
           QQYTP+DPPPPPSSSPPPMPPLPP  QFPLPQF QNAGSVS   IPY YSMTQ +PPLAM
Sbjct: 421 QQYTPSDPPPPPSSSPPPMPPLPPVAQFPLPQFTQNAGSVSSIPIPYSYSMTQSLPPLAM 480

Query: 481 SGYPNVGAPVTGMSPFTIQPNSYQSFQASDGNFYNQSSSMPMAPISRQ 527
            GYPN GAPVTGMSPFTI  NSYQ+FQA DGNFYNQSSSMPMAPISRQ
Sbjct: 481 PGYPNAGAPVTGMSPFTIPTNSYQNFQAPDGNFYNQSSSMPMAPISRQ 519

[Close]

BLAST of Sed0004313 vs. ExPASy Swiss-Prot
Match: Q9NQG5 (Regulation of nuclear pre-mRNA domain-containing protein 1B OS=Homo sapiens OX=9606 GN=RPRD1B PE=1 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 3.3e-23
Identity = 51/116 (43.97%), Postives = 71/116 (61.21%), Query Frame = 0


Query: 4   TFNPQILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPSEQKLAYLYL 63
           +F+   L  KL+ L+NSQ S++TLS W I H   A  +V  W ++   + S +KL +LYL
Sbjct: 3   SFSESALEKKLSELSNSQQSVQTLSLWLIHHRKHAGPIVSVWHRELRKAKSNRKLTFLYL 62

Query: 64  ANDILQNSRRKGSEFVGEFWKVLPGALRHVIENGDDFGRNAALRLIGIWEERKVFG 120
           AND++QNS+RKG EF  EF  VL  A  HV    D+  +    RL+ IW+ER V+G
Sbjct: 63  ANDVIQNSKRKGPEFTREFESVLVDAFSHVAREADEGCKKPLERLLNIWQERSVYG 118

[Close]

BLAST of Sed0004313 vs. ExPASy Swiss-Prot
Match: Q9CSU0 (Regulation of nuclear pre-mRNA domain-containing protein 1B OS=Mus musculus OX=10090 GN=Rprd1b PE=1 SV=2)

HSP 1 Score: 111.3 bits (277), Expect = 3.3e-23
Identity = 51/116 (43.97%), Postives = 71/116 (61.21%), Query Frame = 0


Query: 4   TFNPQILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPSEQKLAYLYL 63
           +F+   L  KL+ L+NSQ S++TLS W I H   A  +V  W ++   + S +KL +LYL
Sbjct: 3   SFSESALEKKLSELSNSQQSVQTLSLWLIHHRKHAGPIVSVWHRELRKAKSNRKLTFLYL 62

Query: 64  ANDILQNSRRKGSEFVGEFWKVLPGALRHVIENGDDFGRNAALRLIGIWEERKVFG 120
           AND++QNS+RKG EF  EF  VL  A  HV    D+  +    RL+ IW+ER V+G
Sbjct: 63  ANDVIQNSKRKGPEFTREFESVLVDAFSHVAREADEGCKKPLERLLNIWQERSVYG 118

[Close]

BLAST of Sed0004313 vs. ExPASy Swiss-Prot
Match: Q8VDS4 (Regulation of nuclear pre-mRNA domain-containing protein 1A OS=Mus musculus OX=10090 GN=Rprd1a PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 2.8e-22
Identity = 80/274 (29.20%), Postives = 132/274 (48.18%), Query Frame = 0


Query: 5   FNPQILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPSEQKLAYLYLA 64
           F+   L  KL+ L+NSQ S++TLS W I H   ++ +V  W+++   +   +KL +LYLA
Sbjct: 4   FSEAALEKKLSELSNSQQSVQTLSLWLIHHRKHSRPIVTVWERELRKAKPNRKLTFLYLA 63

Query: 65  NDILQNSRRKGSEFVGEFWKVLPGALRHVIENGDDFGRNAALRLIGIWEERKVFGSRG-Q 124
           ND++QNS+RKG EF  +F  V+  A +HV    D+  +    R++ IWEER V+ +   +
Sbjct: 64  NDVIQNSKRKGPEFTKDFAPVIVEAFKHVSSETDESCKKHLGRVLSIWEERSVYENDVLE 123

Query: 125 SLKEEIMGKHMETSNRNGKQFNIKLKQSSSI------------------SLDKIVSGYQV 184
            LK  + G   +   R  +Q  +   ++ S                    L+   SG   
Sbjct: 124 QLKHALYG-DKKARKRTYEQIKVDENENCSSLGSPSEPPQTLDLVRALQDLENAASGDAA 183

Query: 185 VHGSEVDEDVVLRKCRNSISYLQKL-DKEIGAEVNSGQYHGSSVAEDLQGNHTILRNCIE 244
           VH       V +++    +S L+K+ DKE G  ++        +  D  G      +  +
Sbjct: 184 VHQRIASLPVEVQE----VSLLEKITDKESGERLSKMVEDACMLLADYNGRLAAEIDDRK 243

Query: 245 QLTVIETSRANLVSHLREALQEQEFKLEQVRDQL 259
           QLT      A+ +   +EAL E+E KLE+ + +L
Sbjct: 244 QLT---RMLADFLRCQKEALAEKEHKLEEYKRKL 269

[Close]

BLAST of Sed0004313 vs. ExPASy Swiss-Prot
Match: Q0P5J9 (Regulation of nuclear pre-mRNA domain-containing protein 1A OS=Bos taurus OX=9913 GN=RPRD1A PE=2 SV=2)

HSP 1 Score: 106.3 bits (264), Expect = 1.1e-21
Identity = 79/270 (29.26%), Postives = 133/270 (49.26%), Query Frame = 0


Query: 5   FNPQILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPSEQKLAYLYLA 64
           F+   L  KL+ L+NSQ S++TLS W I H   ++ +V  W+++   +   +KL +LYLA
Sbjct: 4   FSEAALEKKLSELSNSQQSVQTLSLWLIHHRKHSRPIVTVWERELRKAKPNRKLTFLYLA 63

Query: 65  NDILQNSRRKGSEFVGEFWKVLPGALRHVIENGDDFGRNAALRLIGIWEERKVFGSRG-Q 124
           ND++QNS+RKG EF  +F  V+  A +HV    D+  +    R++ IWEER V+ +   +
Sbjct: 64  NDVIQNSKRKGPEFTKDFAPVIVEAFKHVSSETDESCKKHLGRVLSIWEERSVYENDVLE 123

Query: 125 SLKEEIMGKHMETSNRNGKQFNIKLKQSSSI---------SLDKIVSGYQVVHGSEVDED 184
            LK+ + G   +   R  +Q  +   ++ S          +LD + +   + + +  D  
Sbjct: 124 QLKQALYG-DKKPRKRTYEQIKVDENENCSSLGSPSEPPQTLDLVRALQDLENAASGDAA 183

Query: 185 VVLRKCR-----NSISYLQKL-DKEIGAEVNSGQYHGSSVAEDLQGNHTILRNCIEQLTV 244
           V  R          +S L K+ DKE G  ++        +  D  G      +  +QLT 
Sbjct: 184 VHQRIASLPVEVQEVSLLDKITDKESGERLSKMVEDACMLLADYNGRLAAEIDDRKQLT- 243

Query: 245 IETSRANLVSHLREALQEQEFKLEQVRDQL 259
                A+ +   +EAL E+E KLE+ + +L
Sbjct: 244 --RMLADFLRCQKEALAEKEHKLEEYKRKL 269

[Close]

BLAST of Sed0004313 vs. ExPASy Swiss-Prot
Match: Q96P16 (Regulation of nuclear pre-mRNA domain-containing protein 1A OS=Homo sapiens OX=9606 GN=RPRD1A PE=1 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 1.1e-21
Identity = 79/270 (29.26%), Postives = 133/270 (49.26%), Query Frame = 0


Query: 5   FNPQILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPSEQKLAYLYLA 64
           F+   L  KL+ L+NSQ S++TLS W I H   ++ +V  W+++   +   +KL +LYLA
Sbjct: 4   FSEAALEKKLSELSNSQQSVQTLSLWLIHHRKHSRPIVTVWERELRKAKPNRKLTFLYLA 63

Query: 65  NDILQNSRRKGSEFVGEFWKVLPGALRHVIENGDDFGRNAALRLIGIWEERKVFGSRG-Q 124
           ND++QNS+RKG EF  +F  V+  A +HV    D+  +    R++ IWEER V+ +   +
Sbjct: 64  NDVIQNSKRKGPEFTKDFAPVIVEAFKHVSSETDESCKKHLGRVLSIWEERSVYENDVLE 123

Query: 125 SLKEEIMGKHMETSNRNGKQFNIKLKQSSSI---------SLDKIVSGYQVVHGSEVDED 184
            LK+ + G   +   R  +Q  +   ++ S          +LD + +   + + +  D  
Sbjct: 124 QLKQALYG-DKKPRKRTYEQIKVDENENCSSLGSPSEPPQTLDLVRALQDLENAASGDAA 183

Query: 185 VVLRKCR-----NSISYLQKL-DKEIGAEVNSGQYHGSSVAEDLQGNHTILRNCIEQLTV 244
           V  R          +S L K+ DKE G  ++        +  D  G      +  +QLT 
Sbjct: 184 VHQRIASLPVEVQEVSLLDKITDKESGERLSKMVEDACMLLADYNGRLAAEIDDRKQLT- 243

Query: 245 IETSRANLVSHLREALQEQEFKLEQVRDQL 259
                A+ +   +EAL E+E KLE+ + +L
Sbjct: 244 --RMLADFLRCQKEALAEKEHKLEEYKRKL 269

[Close]

BLAST of Sed0004313 vs. ExPASy TrEMBL
Match: A0A6J1DG44 (UPF0400 protein C337.03 OS=Momordica charantia OX=3673 GN=LOC111020199 PE=4 SV=1)

HSP 1 Score: 909.1 bits (2348), Expect = 8.8e-261
Identity = 465/526 (88.40%), Postives = 491/526 (93.35%), Query Frame = 0


Query: 1   MGGTFNPQILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPSEQKLAY 60
           MGGTFN  ILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHC+P EQ+LAY
Sbjct: 1   MGGTFNAHILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCAPREQRLAY 60

Query: 61  LYLANDILQNSRRKGSEFVGEFWKVLPGALRHVIENGDDFGRNAALRLIGIWEERKVFGS 120
           LYLANDILQNSRRKGSEFVGEFWKVLP ALR VIENGDDFGRNAALRLIGIWEERKVFGS
Sbjct: 61  LYLANDILQNSRRKGSEFVGEFWKVLPDALRDVIENGDDFGRNAALRLIGIWEERKVFGS 120

Query: 121 RGQSLKEEIMGKHMETSNRNGKQFNIKLKQSSSISLDKIVSGYQVVHGSEVDEDVVLRKC 180
           RGQSLKEEIMGKH+ET NRNGKQF++KLKQS+S SLDKIV+GYQVV+G+E+DEDVVL KC
Sbjct: 121 RGQSLKEEIMGKHVETGNRNGKQFSVKLKQSTSTSLDKIVAGYQVVYGTEIDEDVVLSKC 180

Query: 181 RNSISYLQKLDKEIGAEVNSGQYHGSSVAEDLQGNHTILRNCIEQLTVIETSRANLVSHL 240
           RNSISYL+KLDKEIGA+VNSGQYHGSSV+EDLQ +HTILR CIEQLT IE+SRANLVSHL
Sbjct: 181 RNSISYLEKLDKEIGADVNSGQYHGSSVSEDLQRHHTILRGCIEQLTAIESSRANLVSHL 240

Query: 241 REALQEQEFKLEQVRDQLQASHSQSEQTQNLCRQFFNGENVQPMAGEASKDAQTSISPHR 300
           REALQEQEFKL++VR+QLQASHSQSEQTQNL RQF NGENVQPMA EASKDAQTSI+PH 
Sbjct: 241 REALQEQEFKLDEVRNQLQASHSQSEQTQNLSRQFLNGENVQPMAEEASKDAQTSIAPHS 300

Query: 301 LVPREREQSVPVMYAGSLPFPAKPGPIEEDPRKSAAAAVAAKLTASTSSVQVLSYVLSSL 360
           LVPREREQS PVMYA SLPFPAKPGP EEDPRKSAAAAVAAKLTASTSSVQ+LSYVLSSL
Sbjct: 301 LVPREREQSAPVMYAASLPFPAKPGPNEEDPRKSAAAAVAAKLTASTSSVQMLSYVLSSL 360

Query: 361 ASEGVIGNPNKELSGDYPPEKRTKLENDPSPYTLPPNPQRPPISSFPHPESLQHNASSTS 420
           ASEGVIGNP KE S DYP EKR KLEND  PYTLPPNPQRPP+SSFPHPESLQHNASSTS
Sbjct: 361 ASEGVIGNPIKESSSDYPSEKRPKLENDQPPYTLPPNPQRPPVSSFPHPESLQHNASSTS 420

Query: 421 QQYTPTDPPPPPSSSPPPMPPLPPAGQFPLPQFPQNAGSVSIIPYGYSMTQPMPPLAMSG 480
           QQYTPTDPPPPPSSSPPPMPPLPP  QFPLPQF QNAGSVS +PY YS+TQP+ PLAM G
Sbjct: 421 QQYTPTDPPPPPSSSPPPMPPLPPVVQFPLPQFTQNAGSVSSVPYSYSLTQPLQPLAMPG 480

Query: 481 YPNVGAPVTGMSPFTIQPNSYQSFQASDGNFYNQSSSMPMAPISRQ 527
           YPNVG PVTGMSPFTI  NSYQ+FQASDGNFYNQSSSMPMAP+SRQ
Sbjct: 481 YPNVGTPVTGMSPFTIPTNSYQNFQASDGNFYNQSSSMPMAPMSRQ 526

[Close]

BLAST of Sed0004313 vs. ExPASy TrEMBL
Match: A0A1S3B3N2 (UPF0400 protein C337.03 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485437 PE=4 SV=1)

HSP 1 Score: 905.2 bits (2338), Expect = 1.3e-259
Identity = 462/528 (87.50%), Postives = 488/528 (92.42%), Query Frame = 0


Query: 1   MGGTFNPQILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPSEQKLAY 60
           MGGTFNPQILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSP EQ+LAY
Sbjct: 1   MGGTFNPQILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAY 60

Query: 61  LYLANDILQNSRRKGSEFVGEFWKVLPGALRHVIENGDDFGRNAALRLIGIWEERKVFGS 120
           LYLANDILQNSRRKGSEFVGEFWKVLP ALR VI NGD+FGRNAALRLIGIWEERKVFGS
Sbjct: 61  LYLANDILQNSRRKGSEFVGEFWKVLPDALRDVIGNGDEFGRNAALRLIGIWEERKVFGS 120

Query: 121 RGQSLKEEIMGKHMETSNRNGKQFNIKLKQSSSISLDKIVSGYQVVHGSEVDEDVVLRKC 180
           RGQSLKEEIMGKH+ET NRNGK FN KLKQS+S+SLDKIVSGYQVV+G E+DED VL KC
Sbjct: 121 RGQSLKEEIMGKHLETGNRNGKPFNSKLKQSASVSLDKIVSGYQVVYGKEIDEDAVLSKC 180

Query: 181 RNSISYLQKLDKEIGAEVNSGQYHGSSVAEDLQGNHTILRNCIEQLTVIETSRANLVSHL 240
           RNSISYL+KLDKEIGA+VNSGQY GSS+A+DL+G+HTILR+CIEQLT IETSRA+LVSHL
Sbjct: 181 RNSISYLEKLDKEIGADVNSGQYRGSSIADDLRGHHTILRDCIEQLTTIETSRASLVSHL 240

Query: 241 REALQEQEFKLEQVRDQLQASHSQSEQTQNLCRQFFNGENVQPMAGEASKDAQTSISPHR 300
           REALQEQEFKLEQVR+QLQASHSQSEQTQNLCRQF NGENVQPM  E SKDAQTS++PH 
Sbjct: 241 REALQEQEFKLEQVRNQLQASHSQSEQTQNLCRQFLNGENVQPMTEEGSKDAQTSVAPHS 300

Query: 301 LVPREREQSVPVMYAGSLPFPAKPGPIEEDPRKSAAAAVAAKLTASTSSVQVLSYVLSSL 360
           LVPREREQS PVMYA S+PFP+KPGP EEDPRKSAAAAVAAKLTASTSSVQ+LSYVLSSL
Sbjct: 301 LVPREREQSAPVMYAASVPFPSKPGPSEEDPRKSAAAAVAAKLTASTSSVQMLSYVLSSL 360

Query: 361 ASEGVIGNPNKELSGDYPPEKRTKLENDPSPYTLPPNPQRPPISSFPHPESLQHNASSTS 420
           ASEGVIGNPNK+L GDYP EKR KLEND  PY LPPNPQRPP+SSFPHPESLQHN SSTS
Sbjct: 361 ASEGVIGNPNKDLPGDYPSEKRPKLENDQLPYALPPNPQRPPVSSFPHPESLQHNTSSTS 420

Query: 421 QQYTPTDPPPPPSSSPPPMPPLPPAGQFPLPQFPQNAGSVSI--IPYGYSMTQPMPPLAM 480
           QQYTP+DPPPPPSSSPPPMPPLPP  QFPLPQF QNAGSVS   IPY YSMTQ +PPLAM
Sbjct: 421 QQYTPSDPPPPPSSSPPPMPPLPPVAQFPLPQFTQNAGSVSSIPIPYSYSMTQSLPPLAM 480

Query: 481 SGYPNVGAPVTGMSPFTIQPNSYQSFQASDGNFYNQSSSMPMAPISRQ 527
            GYPN GAPVTGMSPFTI  NSYQ+FQA DGNFYNQSSSMPMAPISRQ
Sbjct: 481 PGYPNAGAPVTGMSPFTIPTNSYQNFQAPDGNFYNQSSSMPMAPISRQ 528

[Close]

BLAST of Sed0004313 vs. ExPASy TrEMBL
Match: A0A0A0LMU3 (CID domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G404750 PE=4 SV=1)

HSP 1 Score: 894.0 bits (2309), Expect = 2.9e-256
Identity = 457/528 (86.55%), Postives = 487/528 (92.23%), Query Frame = 0


Query: 1   MGGTFNPQILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPSEQKLAY 60
           MGGTFNPQILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSP EQ+LAY
Sbjct: 1   MGGTFNPQILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAY 60

Query: 61  LYLANDILQNSRRKGSEFVGEFWKVLPGALRHVIENGDDFGRNAALRLIGIWEERKVFGS 120
           LYLANDILQNSRRKGSEFVGEFWKVLP ALR VI NGD+FGRNAALRLIGIWEERKVFGS
Sbjct: 61  LYLANDILQNSRRKGSEFVGEFWKVLPDALRDVIGNGDEFGRNAALRLIGIWEERKVFGS 120

Query: 121 RGQSLKEEIMGKHMETSNRNGKQFNIKLKQSSSISLDKIVSGYQVVHGSEVDEDVVLRKC 180
           RGQSLKEEIMGKH+ET NRNGK FN KLKQS+S+SLDKIVSGYQVV+G E+DED VL KC
Sbjct: 121 RGQSLKEEIMGKHLETGNRNGKPFNSKLKQSASVSLDKIVSGYQVVYGKEIDEDAVLSKC 180

Query: 181 RNSISYLQKLDKEIGAEVNSGQYHGSSVAEDLQGNHTILRNCIEQLTVIETSRANLVSHL 240
           RNSISYL+KLDKEIG +VNSGQY GSS+A+DL+G+H+ILR+CIEQLT IETSRA+LVSHL
Sbjct: 181 RNSISYLEKLDKEIGNDVNSGQYRGSSIADDLRGHHSILRDCIEQLTTIETSRASLVSHL 240

Query: 241 REALQEQEFKLEQVRDQLQASHSQSEQTQNLCRQFFNGENVQPMAGEASKDAQTSISPHR 300
           REALQEQEFKLEQVR+QLQASHSQSEQTQNLCRQF NGENVQPM  E SKDAQTS++PH 
Sbjct: 241 REALQEQEFKLEQVRNQLQASHSQSEQTQNLCRQFLNGENVQPMTEEGSKDAQTSVAPHS 300

Query: 301 LVPREREQSVPVMYAGSLPFPAKPGPIEEDPRKSAAAAVAAKLTASTSSVQVLSYVLSSL 360
           LV REREQS PVMYA S+PFP+KPGP EEDPRKSAAAAVAAKLTASTSSVQ+LSYVLSSL
Sbjct: 301 LVSREREQSAPVMYAASVPFPSKPGPNEEDPRKSAAAAVAAKLTASTSSVQMLSYVLSSL 360

Query: 361 ASEGVIGNPNKELSGDYPPEKRTKLENDPSPYTLPPNPQRPPISSFPHPESLQHNASSTS 420
           ASEGVIGNPNK+L GDYP EKR KLEND  PY LPPNPQRPP+SSFPHPESLQHN+SSTS
Sbjct: 361 ASEGVIGNPNKDLPGDYPSEKRPKLENDQLPYPLPPNPQRPPVSSFPHPESLQHNSSSTS 420

Query: 421 QQYTPTDPPPPPSSSPPPMPPLPPAGQFPLPQFPQNAGSVSI--IPYGYSMTQPMPPLAM 480
           QQYTP+DPPPPPSSSPPPMPPLPP  QFPLPQF QNAGSVS   IPY YSMTQ +PPLAM
Sbjct: 421 QQYTPSDPPPPPSSSPPPMPPLPPVAQFPLPQFTQNAGSVSSIPIPYSYSMTQSLPPLAM 480

Query: 481 SGYPNVGAPVTGMSPFTIQPNSYQSFQASDGNFYNQSSSMPMAPISRQ 527
            GYPN GAPVTGMSPFTI  NSYQ+FQA DG+FY+QSSSMPMAPISRQ
Sbjct: 481 PGYPNAGAPVTGMSPFTIPTNSYQNFQAPDGSFYSQSSSMPMAPISRQ 528

[Close]

BLAST of Sed0004313 vs. ExPASy TrEMBL
Match: A0A1S3B3S0 (UPF0400 protein C337.03 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485437 PE=4 SV=1)

HSP 1 Score: 882.5 bits (2279), Expect = 8.8e-253
Identity = 455/528 (86.17%), Postives = 480/528 (90.91%), Query Frame = 0


Query: 1   MGGTFNPQILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPSEQKLAY 60
           MGGTFNPQILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSP EQ+LAY
Sbjct: 1   MGGTFNPQILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAY 60

Query: 61  LYLANDILQNSRRKGSEFVGEFWKVLPGALRHVIENGDDFGRNAALRLIGIWEERKVFGS 120
           LYLANDILQNSRRKGSEFVGEFWKVLP ALR VI NGD+FGRNAALRLIGIWEERKVFGS
Sbjct: 61  LYLANDILQNSRRKGSEFVGEFWKVLPDALRDVIGNGDEFGRNAALRLIGIWEERKVFGS 120

Query: 121 RGQSLKEEIMGKHMETSNRNGKQFNIKLKQSSSISLDKIVSGYQVVHGSEVDEDVVLRKC 180
           RGQSLKEEIMGKH+ET NRNGK FN KLKQS+S+SLDKIVSGYQVV+G E+DED VL KC
Sbjct: 121 RGQSLKEEIMGKHLETGNRNGKPFNSKLKQSASVSLDKIVSGYQVVYGKEIDEDAVLSKC 180

Query: 181 RNSISYLQKLDKEIGAEVNSGQYHGSSVAEDLQGNHTILRNCIEQLTVIETSRANLVSHL 240
           RNSISYL+KLDKEIGA+VNS         +DL+G+HTILR+CIEQLT IETSRA+LVSHL
Sbjct: 181 RNSISYLEKLDKEIGADVNS---------DDLRGHHTILRDCIEQLTTIETSRASLVSHL 240

Query: 241 REALQEQEFKLEQVRDQLQASHSQSEQTQNLCRQFFNGENVQPMAGEASKDAQTSISPHR 300
           REALQEQEFKLEQVR+QLQASHSQSEQTQNLCRQF NGENVQPM  E SKDAQTS++PH 
Sbjct: 241 REALQEQEFKLEQVRNQLQASHSQSEQTQNLCRQFLNGENVQPMTEEGSKDAQTSVAPHS 300

Query: 301 LVPREREQSVPVMYAGSLPFPAKPGPIEEDPRKSAAAAVAAKLTASTSSVQVLSYVLSSL 360
           LVPREREQS PVMYA S+PFP+KPGP EEDPRKSAAAAVAAKLTASTSSVQ+LSYVLSSL
Sbjct: 301 LVPREREQSAPVMYAASVPFPSKPGPSEEDPRKSAAAAVAAKLTASTSSVQMLSYVLSSL 360

Query: 361 ASEGVIGNPNKELSGDYPPEKRTKLENDPSPYTLPPNPQRPPISSFPHPESLQHNASSTS 420
           ASEGVIGNPNK+L GDYP EKR KLEND  PY LPPNPQRPP+SSFPHPESLQHN SSTS
Sbjct: 361 ASEGVIGNPNKDLPGDYPSEKRPKLENDQLPYALPPNPQRPPVSSFPHPESLQHNTSSTS 420

Query: 421 QQYTPTDPPPPPSSSPPPMPPLPPAGQFPLPQFPQNAGSVSI--IPYGYSMTQPMPPLAM 480
           QQYTP+DPPPPPSSSPPPMPPLPP  QFPLPQF QNAGSVS   IPY YSMTQ +PPLAM
Sbjct: 421 QQYTPSDPPPPPSSSPPPMPPLPPVAQFPLPQFTQNAGSVSSIPIPYSYSMTQSLPPLAM 480

Query: 481 SGYPNVGAPVTGMSPFTIQPNSYQSFQASDGNFYNQSSSMPMAPISRQ 527
            GYPN GAPVTGMSPFTI  NSYQ+FQA DGNFYNQSSSMPMAPISRQ
Sbjct: 481 PGYPNAGAPVTGMSPFTIPTNSYQNFQAPDGNFYNQSSSMPMAPISRQ 519

[Close]

BLAST of Sed0004313 vs. ExPASy TrEMBL
Match: A0A6J1FFD5 (UPF0400 protein C337.03-like OS=Cucurbita moschata OX=3662 GN=LOC111445219 PE=4 SV=1)

HSP 1 Score: 875.2 bits (2260), Expect = 1.4e-250
Identity = 457/528 (86.55%), Postives = 480/528 (90.91%), Query Frame = 0


Query: 1   MGGTFNPQILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPSEQKLAY 60
           MGGTFNPQILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSP EQ+LAY
Sbjct: 1   MGGTFNPQILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAY 60

Query: 61  LYLANDILQNSRRKGSEFVGEFWKVLPGALRHVIENGDDFGRNAALRLIGIWEERKVFGS 120
           LYLANDILQNSRRKGSEFVGEFWKVLP ALR VIE+GDDFGRNAALRLIGIWEERKVFGS
Sbjct: 61  LYLANDILQNSRRKGSEFVGEFWKVLPDALRDVIEHGDDFGRNAALRLIGIWEERKVFGS 120

Query: 121 RGQSLKEEIMGKHMETSNRNGKQFNIKLKQSSSISLDKIVSGYQVVHGSEVDEDVVLRKC 180
           RGQSLKEEIMGK +ET NRNGK F+ KLKQS SISLDKIV GYQVV+ SEVDED VL KC
Sbjct: 121 RGQSLKEEIMGKSLETGNRNGKHFSSKLKQSGSISLDKIVCGYQVVYRSEVDEDAVLSKC 180

Query: 181 RNSISYLQKLDKEIGAEVNSGQYHGSSVAEDLQGNHTILRNCIEQLTVIETSRANLVSHL 240
           RNSISYL+KLDKEIGA+VNSGQY G+S AEDL+G+H ILR+CIEQLT IETSRA+LVSHL
Sbjct: 181 RNSISYLEKLDKEIGADVNSGQYRGTSAAEDLRGHHHILRDCIEQLTTIETSRASLVSHL 240

Query: 241 REALQEQEFKLEQVRDQLQASHSQSEQTQNLCRQFFNGENVQPMA-GEASKDAQTSISPH 300
           REALQEQEFKLEQVR+QLQ SHSQSEQTQNLCRQF NGENV+ M   EASKDAQTSI+PH
Sbjct: 241 REALQEQEFKLEQVRNQLQVSHSQSEQTQNLCRQFLNGENVEAMTKEEASKDAQTSIAPH 300

Query: 301 RLVPREREQSVPVMYAGSLPFPAKPGPIEEDPRKSAAAAVAAKLTASTSSVQVLSYVLSS 360
            LVPRER+QS PVMYA SLPFPAKPGP+EEDPRKSAAAAVAAKLTASTSSVQ+LSYVLSS
Sbjct: 301 TLVPRERDQSAPVMYAPSLPFPAKPGPLEEDPRKSAAAAVAAKLTASTSSVQMLSYVLSS 360

Query: 361 LASEGVIGNPNKELSGDYPPEKRTKLENDPSPYTLPPNPQRPPISSFPHPESLQHNASST 420
           LASEGVIGNPNKEL GDYP EKR KLEND SPYTLPPNPQRPP+  FPHPESLQHNASST
Sbjct: 361 LASEGVIGNPNKELPGDYPSEKRLKLENDQSPYTLPPNPQRPPVPPFPHPESLQHNASST 420

Query: 421 SQQYTPTDPPPPPSSSPPPMPPLPPAGQFPLPQFPQN-AGSVSIIPYGYSMTQPMPPLAM 480
           SQQYTP+D PPPPSSSPPP+PPLPP GQ PLPQF QN AGSVS I Y YSMTQ + PLA 
Sbjct: 421 SQQYTPSDLPPPPSSSPPPVPPLPPVGQLPLPQFTQNAAGSVSSIAYSYSMTQSLQPLAR 480

Query: 481 SGYPNVGAPVTGMSPFTIQPNSYQSFQASDGNFYNQSSSMPMAPISRQ 527
            GYPN+GAPVTGMSP TI  NSYQSFQ SDGNFYN SSSMPMAPISRQ
Sbjct: 481 PGYPNLGAPVTGMSPCTIPTNSYQSFQGSDGNFYNPSSSMPMAPISRQ 528

[Close]

BLAST of Sed0004313 vs. TAIR 10
Match: AT3G26990.1 (ENTH/VHS family protein )

HSP 1 Score: 459.9 bits (1182), Expect = 2.7e-129
Identity = 282/543 (51.93%), Postives = 352/543 (64.83%), Query Frame = 0


Query: 1   MGGTFNPQILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPSEQKLAY 60
           MG +FN QILV+KLA+LNNSQASIETLSHWCIFHMNKAK VVETW +QFHC+P EQ+LAY
Sbjct: 1   MGSSFNAQILVEKLAKLNNSQASIETLSHWCIFHMNKAKHVVETWGRQFHCAPREQRLAY 60

Query: 61  LYLANDILQNSRRKGSEFVGEFWKVLPGALRHVIENGDDFGRNAALRLIGIWEERKVFGS 120
           LYLANDILQNSRRKGSEFVGEFWKVLP ALR +IENGDDFGR +A RL+ IWEERKVFGS
Sbjct: 61  LYLANDILQNSRRKGSEFVGEFWKVLPDALRDMIENGDDFGRKSARRLVNIWEERKVFGS 120

Query: 121 RGQSLKEEIMGKHMETSNRNGKQFNIKL----KQSSSISLDKIVSGYQVVHGSEVDEDVV 180
           RGQ LKEE++G+  E   RNG    +KL    +Q +  +L+K+VS  +V+HG ++DED +
Sbjct: 121 RGQILKEELLGRQPENGTRNGNLVPLKLSVPQRQVNGSTLEKVVSAVEVLHGVQIDEDAL 180

Query: 181 LRKCRNSISYLQKLDKEIGAEVNSGQYHGSSVAEDLQGNHTILRNCIEQLTVIETSRANL 240
           + K  N+  YL+K  +E+  +++SG   G +V ++LQG H ILR+CIEQL  +ETSR +L
Sbjct: 181 VGKSTNAAGYLEKATQEVERDLSSGHAPGPAVVKELQGQHVILRDCIEQLGAMETSRTSL 240

Query: 241 VSHLREALQEQEFKLEQVRDQLQASHSQSEQTQNLCRQFF-NGENVQPMAGEAS------ 300
           +SHLREALQEQE KLEQVR+ LQ +  QS++T +LCRQ   +G + QP A E        
Sbjct: 241 ISHLREALQEQELKLEQVRNHLQIARFQSDRTGDLCRQLLDHGGSSQPPATEEEESKEVI 300

Query: 301 KDAQTSISPHRLVPREREQSVPVMYAGSLPFPAKPGPIEEDPRKSAAAAVAAKLTASTSS 360
           K + T+ +P      + EQS PVM+A      + P    EDPRK+AAAAV AKLTASTSS
Sbjct: 301 KVSSTAAAPQSFTHSDVEQSAPVMFA------SNPTQSLEDPRKTAAAAVVAKLTASTSS 360

Query: 361 VQVLSYVLSSLASEGVIGNPNKEL------SGDYPPEKRTKLENDPSPYTLPPNPQRPPI 420
            ++LSYVLSSLASEG+IGN N         S D+PPEKR KL+N    Y           
Sbjct: 361 AEMLSYVLSSLASEGIIGNNNPPAVTETLSSVDFPPEKRPKLQNHDQSYL---------- 420

Query: 421 SSFPHPESLQHNASSTSQQYTPTDPPPPPSSSPPPMPPLPPAGQFPLPQFPQNAGSVSII 480
              PH ++    +SST  Q  P  PPPP    P  + PL P G  P+   P N      I
Sbjct: 421 --SPHHQNTATTSSSTPPQ--PLPPPPPFQLQPQFLQPLQPPG--PVNHTPFN----YTI 480

Query: 481 PYGYSMTQPMPPLAMSGYPNVGAPVTGMSPFTIQPNSYQSFQASDGNFYNQSSSMPMAPI 527
               + TQ          P +    T  +P     NSYQ FQ  DG FY  +SS+P+ P+
Sbjct: 481 ATSTATTQQQQQEQGPWVPGLTQLSTTSAP---SENSYQKFQGQDG-FYGINSSVPITPV 513

[Close]

BLAST of Sed0004313 vs. TAIR 10
Match: AT5G10060.1 (ENTH/VHS family protein )

HSP 1 Score: 245.7 bits (626), Expect = 8.0e-65
Identity = 178/515 (34.56%), Postives = 275/515 (53.40%), Query Frame = 0


Query: 1   MGGTFNPQILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPSEQKLAY 60
           M   F+ QIL+DKLA+LN+SQ SIETLSHWCIF+ +KA+ +V TW+KQFH +  +QK+  
Sbjct: 1   MSSVFSDQILIDKLAKLNSSQQSIETLSHWCIFNRSKAELIVTTWEKQFHSTEMDQKVPL 60

Query: 61  LYLANDILQNSRRKGSEFVGEFWKVLPGALRHVIENGDDFGRNAALRLIGIWEERKVFGS 120
           LYLANDILQNS+R+G+EFV EFW VLP AL+ ++  GDD G++A  R+I IWEER+VFGS
Sbjct: 61  LYLANDILQNSKRQGNEFVQEFWNVLPKALKDIVSQGDDNGKSAVARVIKIWEERRVFGS 120

Query: 121 RGQSLKEEIMGKHM--------------ETSNRNGKQFNIKLKQSSSISLDKIVSGYQVV 180
           R +SLK+ ++G+ +              ++S R  K    KL  S  ++ +KI S Y +V
Sbjct: 121 RSKSLKDVMLGEDVPLPLDISKKRPRGSKSSKRESKSSRTKLASSGGVA-EKIASAYHLV 180

Query: 181 HGSEVDEDVVLRKCRNSISYLQKLDKEIGAEVNSGQYH--GSSVAEDLQGNHTILRNCIE 240
                +E+  + KC++++  ++K++K++    ++ + +    S+A++L+    +LR CIE
Sbjct: 181 VAENSNEEAEMNKCKSAVKRIRKMEKDVEEACSTAKDNPKRKSLAKELEEEEYLLRQCIE 240

Query: 241 QLTVIETSRANLVSHLREALQEQEFKLEQVRDQLQASHSQSEQTQNLCRQFFNGENVQPM 300
           +L  ++ SR++LV+ L++AL+EQE +L+ ++ Q+Q +  Q+E+ QN+ ++  + +     
Sbjct: 241 KLKSVQGSRSSLVNQLKDALREQESELDNLKAQIQVAKEQTEEAQNMQKRLNDEDYTSKQ 300

Query: 301 AGEASKDAQTSISPHRLVPREREQSVPVMYAGSLPFPAKPGPIEEDPRKSAAAAVAAKLT 360
              A+   +T+ +                         K G       K   A++AA LT
Sbjct: 301 TTAATTITETNDN------------------------TKSG----QASKMTPASIAAMLT 360

Query: 361 ASTSSVQVLSYVLSSLASEGVIGNPNKELSGDYPPEKRTKLENDPSPYTLPPNPQRPPIS 420
           ASTSS  ++  VLSS A+E                 K + L    S  T+P +      +
Sbjct: 361 ASTSSHMIMQSVLSSFAAEAT---------------KTSGLSKSES--TVPVSDTN---A 420

Query: 421 SFPHPESLQHNASSTSQQYTPTDPPPPPSSSPPPMP---------PLPPAGQFPLPQFPQ 480
           SFP   + Q+   +T  QY     PPPP    PP+          PL P G  P P  P 
Sbjct: 421 SFPSYNNSQNQTPTTQGQYHVIPNPPPPQFLKPPVMNNPYAFGNIPLMPPGLPPPPPPPH 466

Query: 481 NAGSVS-IIPYGYS--MTQPMPPLAMSGYPNVGAP 488
             G+    IP   S   +Q  P     G    GAP
Sbjct: 481 LIGNQQPQIPQSNSAQQSQQGPTFQPPGIMYYGAP 466

[Close]

BLAST of Sed0004313 vs. TAIR 10
Match: AT5G65180.1 (ENTH/VHS family protein )

HSP 1 Score: 242.7 bits (618), Expect = 6.8e-64
Identity = 163/458 (35.59%), Postives = 258/458 (56.33%), Query Frame = 0


Query: 1   MGGTFNPQILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPSEQKLAY 60
           M   F+ +IL+D LA+LN++Q SI+TLS WCI H ++A+ VV TW+KQFH +   QK+  
Sbjct: 1   MSSPFSEEILIDNLAKLNSTQQSIQTLSQWCIVHRSEAELVVTTWEKQFHSTQIGQKVPL 60

Query: 61  LYLANDILQNSRRKGSEFVGEFWKVLPGALRHVIENGDDFGRNAALRLIGIWEERKVFGS 120
           LYLANDILQNS+R+G+EFV EFWKVLPGAL+ ++  GDD+G+    RL+ IWEER+VFGS
Sbjct: 61  LYLANDILQNSKRQGNEFVQEFWKVLPGALKDIVSLGDDYGKGVVSRLVNIWEERRVFGS 120

Query: 121 RGQSLKEEIMGKH--------------METSNRNGKQFNIKLKQSSSISLDKIVSGYQVV 180
           R +SLK+ ++ +                +++ R+ K  + K K SS    +KIVS + +V
Sbjct: 121 RSKSLKDVMLSEEAPPPLDVSKKRFRGSKSAKRDSK--STKTKLSSGGVSEKIVSAFNLV 180

Query: 181 HGSEVDEDVVLRKCRNSISYLQKLDKEIGAEVNSGQ-YHGSSVAEDLQGNHTILRNCIEQ 240
                +E+  + KC++++  ++K++K++    ++ +     S+A++L+    ILR  +E+
Sbjct: 181 RAENSNEETEMNKCKSAVRRIRKMEKDVEDACSTAKDPRKESLAKELEEEENILRQSVEK 240

Query: 241 LTVIETSRANLVSHLREALQEQEFKLEQVRDQLQASHSQSEQTQNLCRQFFNGENVQPMA 300
           L  +E SR +LV+HLREAL+EQE +LE ++ Q+Q +  Q+E+ QN+ ++  N   V    
Sbjct: 241 LKSVEESRTSLVNHLREALREQESELENLQSQIQVAQEQTEEAQNMQKRLNNETPVNNNN 300

Query: 301 GEASKDAQTSISPHRLVPREREQSVPVMYAGSLPFPAKPGPIEEDPRKSAAAAVAAKLTA 360
           G + + A+  I+P                                   ++ AA+A  LT+
Sbjct: 301 GTSGQSAK--ITP-----------------------------------ASIAAMAEMLTS 360

Query: 361 STSSVQVLSYVLSSLASEGVIGNPNKELSGDYPPEKRTKLE-NDPSPYTLPPNPQRPPIS 420
           ST+S  ++  VLSS A+E        + SG       TK   +D + + +PPNPQ+  I 
Sbjct: 361 STNSSMIMHSVLSSFAAEAT------QTSG------LTKSNTSDTNAFVVPPNPQQYHI- 405

Query: 421 SFPHPESLQ---HNASSTSQQYTPTDPPPPPSSSPPPM 440
             P+P + Q   +   +         PPPPP + PP M
Sbjct: 421 -IPNPAASQQFPYGFGNIPLMPPGALPPPPPGTLPPHM 405

[Close]

BLAST of Sed0004313 vs. TAIR 10
Match: AT5G65180.2 (ENTH/VHS family protein )

HSP 1 Score: 85.9 bits (211), Expect = 1.1e-16
Identity = 88/310 (28.39%), Postives = 155/310 (50.00%), Query Frame = 0


Query: 135 ETSNRNGKQFNIKLKQSSSISLDKIVSGYQVVHGSEVDEDVVLRKCRNSISYLQKLDKEI 194
           +++ R+ K  + K K SS    +KIVS + +V     +E+  + KC++++  ++K++K++
Sbjct: 21  KSAKRDSK--STKTKLSSGGVSEKIVSAFNLVRAENSNEETEMNKCKSAVRRIRKMEKDV 80

Query: 195 GAEVNSGQ-YHGSSVAEDLQGNHTILRNCIEQLTVIETSRANLVSHLREALQEQEFKLEQ 254
               ++ +     S+A++L+    ILR  +E+L  +E SR +LV+HLREAL+EQE +LE 
Sbjct: 81  EDACSTAKDPRKESLAKELEEEENILRQSVEKLKSVEESRTSLVNHLREALREQESELEN 140

Query: 255 VRDQLQASHSQSEQTQNLCRQFFNGENVQPMAGEASKDAQTSISPHRLVPREREQSVPVM 314
           ++ Q+Q +  Q+E+ QN+ ++  N   V    G + + A+  I+P               
Sbjct: 141 LQSQIQVAQEQTEEAQNMQKRLNNETPVNNNNGTSGQSAK--ITP--------------- 200

Query: 315 YAGSLPFPAKPGPIEEDPRKSAAAAVAAKLTASTSSVQVLSYVLSSLASEGVIGNPNKEL 374
                               ++ AA+A  LT+ST+S  ++  VLSS A+E        + 
Sbjct: 201 --------------------ASIAAMAEMLTSSTNSSMIMHSVLSSFAAEAT------QT 260

Query: 375 SGDYPPEKRTKLE-NDPSPYTLPPNPQRPPISSFPHPESLQ---HNASSTSQQYTPTDPP 434
           SG       TK   +D + + +PPNPQ+  I   P+P + Q   +   +         PP
Sbjct: 261 SG------LTKSNTSDTNAFVVPPNPQQYHI--IPNPAASQQFPYGFGNIPLMPPGALPP 277

Query: 435 PPPSSSPPPM 440
           PPP + PP M
Sbjct: 321 PPPGTLPPHM 277

The following BLAST results are available for this feature:

BLAST of Sed0004313 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022152479.1	1.8e-260	88.40	UPF0400 protein C337.03 [Momordica charantia] >XP_022152481.1 UPF0400 protein C3...	[more]
XP_038884747.1	1.5e-259	87.83	UPF0400 protein C337.03 [Benincasa hispida] >XP_038884750.1 UPF0400 protein C337...	[more]
XP_008441251.1	2.6e-259	87.50	PREDICTED: UPF0400 protein C337.03 isoform X1 [Cucumis melo]	[more]
XP_004138638.1	6.0e-256	86.55	UPF0400 protein C337.03 [Cucumis sativus] >XP_031737380.1 UPF0400 protein C337.0...	[more]
XP_008441252.1	1.8e-252	86.17	PREDICTED: UPF0400 protein C337.03 isoform X2 [Cucumis melo]	[more]

BLAST of Sed0004313 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9NQG5	3.3e-23	43.97	Regulation of nuclear pre-mRNA domain-containing protein 1B OS=Homo sapiens OX=9...	[more]
Q9CSU0	3.3e-23	43.97	Regulation of nuclear pre-mRNA domain-containing protein 1B OS=Mus musculus OX=1...	[more]
Q8VDS4	2.8e-22	29.20	Regulation of nuclear pre-mRNA domain-containing protein 1A OS=Mus musculus OX=1...	[more]
Q0P5J9	1.1e-21	29.26	Regulation of nuclear pre-mRNA domain-containing protein 1A OS=Bos taurus OX=991...	[more]
Q96P16	1.1e-21	29.26	Regulation of nuclear pre-mRNA domain-containing protein 1A OS=Homo sapiens OX=9...	[more]

BLAST of Sed0004313 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DG44	8.8e-261	88.40	UPF0400 protein C337.03 OS=Momordica charantia OX=3673 GN=LOC111020199 PE=4 SV=1	[more]
A0A1S3B3N2	1.3e-259	87.50	UPF0400 protein C337.03 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485437 PE=4 ...	[more]
A0A0A0LMU3	2.9e-256	86.55	CID domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G404750 PE=4 SV...	[more]
A0A1S3B3S0	8.8e-253	86.17	UPF0400 protein C337.03 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485437 PE=4 ...	[more]
A0A6J1FFD5	1.4e-250	86.55	UPF0400 protein C337.03-like OS=Cucurbita moschata OX=3662 GN=LOC111445219 PE=4 ...	[more]

BLAST of Sed0004313 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G26990.1	2.7e-129	51.93	ENTH/VHS family protein	[more]
AT5G10060.1	8.0e-65	34.56	ENTH/VHS family protein	[more]
AT5G65180.1	6.8e-64	35.59	ENTH/VHS family protein	[more]
AT5G65180.2	1.1e-16	28.39	ENTH/VHS family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 237..264
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 406..423
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 424..450
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 365..455
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 391..405
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 285..308
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 507..526
None	No IPR available	PANTHER	PTHR12460	CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN	coord: 1..526
None	No IPR available	PANTHER	PTHR12460:SF23	OS01G0925000 PROTEIN	coord: 1..526
None	No IPR available	CDD	cd16981	CID_RPRD_like	coord: 7..130 e-value: 4.12382E-64 score: 202.811
IPR006569	CID domain	SMART	SM00582	558neu5	coord: 9..130 e-value: 1.7E-48 score: 177.1
IPR006569	CID domain	PFAM	PF04818	CID	coord: 9..120 e-value: 4.9E-33 score: 114.0
IPR006569	CID domain	PROSITE	PS51391	CID	coord: 2..134 score: 45.159531
IPR008942	ENTH/VHS	GENE3D	1.25.40.90		coord: 2..131 e-value: 9.1E-37 score: 127.9
IPR008942	ENTH/VHS	SUPERFAMILY	48464	ENTH/VHS domain	coord: 10..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0004313.1	Sed0004313.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031124	mRNA 3'-end processing
cellular_component	GO:0016591	RNA polymerase II, holoenzyme
molecular_function	GO:0000993	RNA polymerase II complex binding