Homology
BLAST of Sed0002542 vs. NCBI nr
Match:
XP_022147484.1 (pre-mRNA cleavage factor Im 25 kDa subunit 2 [Momordica charantia] >XP_022950750.1 pre-mRNA cleavage factor Im 25 kDa subunit 2-like [Cucurbita moschata] >XP_022974610.1 pre-mRNA cleavage factor Im 25 kDa subunit 2-like [Cucurbita maxima] >XP_022975252.1 pre-mRNA cleavage factor Im 25 kDa subunit 2-like isoform X1 [Cucurbita maxima] >XP_022975253.1 pre-mRNA cleavage factor Im 25 kDa subunit 2-like isoform X2 [Cucurbita maxima] >XP_022975430.1 pre-mRNA cleavage factor Im 25 kDa subunit 2-like [Cucurbita maxima] >XP_023541013.1 pre-mRNA cleavage factor Im 25 kDa subunit 2-like [Cucurbita pepo subsp. pepo] >KAG7028617.1 Pre-mRNA cleavage factor Im 25 kDa subunit 2 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 410.6 bits (1054), Expect = 7.8e-111
Identity = 197/200 (98.50%), Postives = 199/200 (99.50%), Query Frame = 0
Query: 1 MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHK 60
MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHK
Sbjct: 1 MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHK 60
Query: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLGAHSPAHQPDWQIGECVAIWW 120
HPHILLLQIGNTFCKLPGGRLKPGENEI+GLKRKLTSKLGA+SPA QPDWQIGECVAIWW
Sbjct: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALQPDWQIGECVAIWW 120
Query: 121 RPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
RPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
Query: 181 PVISTIPQQLSRFQFNMITT 201
PVISTIPQQLSRFQFNMITT
Sbjct: 181 PVISTIPQQLSRFQFNMITT 200
BLAST of Sed0002542 vs. NCBI nr
Match:
XP_004133873.1 (pre-mRNA cleavage factor Im 25 kDa subunit 2 [Cucumis sativus] >XP_008438064.1 PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 2 [Cucumis melo] >XP_038876350.1 pre-mRNA cleavage factor Im 25 kDa subunit 2 [Benincasa hispida] >KAA0048979.1 Cleavage/polyadenylation specificity factor, 25kDa subunit [Cucumis melo var. makuwa] >TYK17587.1 Cleavage/polyadenylation specificity factor, 25kDa subunit [Cucumis melo var. makuwa])
HSP 1 Score: 409.5 bits (1051), Expect = 1.7e-110
Identity = 196/200 (98.00%), Postives = 199/200 (99.50%), Query Frame = 0
Query: 1 MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHK 60
MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHK
Sbjct: 1 MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHK 60
Query: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLGAHSPAHQPDWQIGECVAIWW 120
HPHILLLQIGNTFCKLPGGRLKPGENEI+GLKRKLTSKLGA+SP+ QPDWQIGECVAIWW
Sbjct: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPSLQPDWQIGECVAIWW 120
Query: 121 RPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
RPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
Query: 181 PVISTIPQQLSRFQFNMITT 201
PVISTIPQQLSRFQFNMITT
Sbjct: 181 PVISTIPQQLSRFQFNMITT 200
BLAST of Sed0002542 vs. NCBI nr
Match:
XP_031259563.1 (pre-mRNA cleavage factor Im 25 kDa subunit 2 [Pistacia vera] >XP_031261299.1 pre-mRNA cleavage factor Im 25 kDa subunit 2 [Pistacia vera])
HSP 1 Score: 404.1 bits (1037), Expect = 7.3e-109
Identity = 192/200 (96.00%), Postives = 197/200 (98.50%), Query Frame = 0
Query: 1 MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHK 60
MVTSPVVNTYPLSSYTFGTKEPK+EKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEH
Sbjct: 1 MVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 60
Query: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLGAHSPAHQPDWQIGECVAIWW 120
HPHILLLQIGNTFCKLPGGRLKPGENEI+GLKRKLTSKLGA+SPA PDWQIGECVAIWW
Sbjct: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWW 120
Query: 121 RPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
RPNFET+MYPYCPPHITKPKECKKLF+VHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
Query: 181 PVISTIPQQLSRFQFNMITT 201
PVISTIPQQLSRFQFNMITT
Sbjct: 181 PVISTIPQQLSRFQFNMITT 200
BLAST of Sed0002542 vs. NCBI nr
Match:
XP_022924789.1 (pre-mRNA cleavage factor Im 25 kDa subunit 2 [Cucurbita moschata] >XP_022980420.1 pre-mRNA cleavage factor Im 25 kDa subunit 2 [Cucurbita maxima] >XP_023528578.1 pre-mRNA cleavage factor Im 25 kDa subunit 2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 403.7 bits (1036), Expect = 9.5e-109
Identity = 194/200 (97.00%), Postives = 196/200 (98.00%), Query Frame = 0
Query: 1 MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHK 60
MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEH
Sbjct: 1 MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 60
Query: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLGAHSPAHQPDWQIGECVAIWW 120
HPHILLLQIGNTFCKLPGGRLKPGENEI+GLKRKLTSKLGA+SPA QPDWQIGECVA WW
Sbjct: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALQPDWQIGECVATWW 120
Query: 121 RPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
RPNFETVMYPYCPPHITK KECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETVMYPYCPPHITKAKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
Query: 181 PVISTIPQQLSRFQFNMITT 201
PVISTIPQQLSRFQFNMITT
Sbjct: 181 PVISTIPQQLSRFQFNMITT 200
BLAST of Sed0002542 vs. NCBI nr
Match:
XP_021293201.1 (pre-mRNA cleavage factor Im 25 kDa subunit 2 [Herrania umbratica] >EOY23171.1 Cleavage/polyadenylation specificity factor, 25kDa subunit [Theobroma cacao])
HSP 1 Score: 402.9 bits (1034), Expect = 1.6e-108
Identity = 191/200 (95.50%), Postives = 197/200 (98.50%), Query Frame = 0
Query: 1 MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHK 60
MVTSPVVNTYPLSSYTFGTKEPK+EKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEH
Sbjct: 1 MVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 60
Query: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLGAHSPAHQPDWQIGECVAIWW 120
HPHILLLQIGNTFCKLPGGRLKPGENEI+GLKRKLTSKLGA+SPA PDWQIGECVAIWW
Sbjct: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWW 120
Query: 121 RPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
RPNFET+MYPYCPPHITKPKECKKLF+VHLSE+EYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEKEYFAVPKNLKLLAVPLFELYDNVQRYG 180
Query: 181 PVISTIPQQLSRFQFNMITT 201
PVISTIPQQLSRFQFNMITT
Sbjct: 181 PVISTIPQQLSRFQFNMITT 200
BLAST of Sed0002542 vs. ExPASy Swiss-Prot
Match:
Q8GXS3 (Pre-mRNA cleavage factor Im 25 kDa subunit 2 OS=Arabidopsis thaliana OX=3702 GN=CFIS2 PE=1 SV=1)
HSP 1 Score: 375.2 bits (962), Expect = 4.7e-103
Identity = 176/200 (88.00%), Postives = 187/200 (93.50%), Query Frame = 0
Query: 1 MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHK 60
M S VVNTYPLS+Y+FGTKEPKLEKDTSVADRLARMK+NYMKEGMRTSVE ILLVQEH
Sbjct: 1 MAMSQVVNTYPLSNYSFGTKEPKLEKDTSVADRLARMKINYMKEGMRTSVEGILLVQEHN 60
Query: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLGAHSPAHQPDWQIGECVAIWW 120
HPHILLLQIGNTFCKLPGGRLKPGENE DGLKRKLTSKLG +S A PDW +GECVA WW
Sbjct: 61 HPHILLLQIGNTFCKLPGGRLKPGENEADGLKRKLTSKLGGNSAALVPDWTVGECVATWW 120
Query: 121 RPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
RPNFET+MYPYCPPHITKPKECK+L+IVHLSE+EYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETMMYPYCPPHITKPKECKRLYIVHLSEKEYFAVPKNLKLLAVPLFELYDNVQRYG 180
Query: 181 PVISTIPQQLSRFQFNMITT 201
PVISTIPQQLSRF FNMI++
Sbjct: 181 PVISTIPQQLSRFHFNMISS 200
BLAST of Sed0002542 vs. ExPASy Swiss-Prot
Match:
Q7T3C6 (Cleavage and polyadenylation specificity factor subunit 5 OS=Danio rerio OX=7955 GN=nudt21 PE=2 SV=1)
HSP 1 Score: 249.2 bits (635), Expect = 3.9e-65
Identity = 116/189 (61.38%), Postives = 140/189 (74.07%), Query Frame = 0
Query: 7 VNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILL 66
+N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH+ PH+LL
Sbjct: 38 INLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFEKIGMRRTVEGVLIVHEHRLPHVLL 97
Query: 67 LQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLGAHSPAHQPDWQIGECVAIWWRPNFET 126
LQ+G TF KLPGG L PGE+E++GLKR +T LG Q DW I +C+ WWRPNFE
Sbjct: 98 LQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVKQ-DWVIDDCIGNWWRPNFEP 157
Query: 127 VMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTI 186
YPY P HITKPKE KKLF+V L E+ FAVPKN KL+A PLFELYDN YGP+IS++
Sbjct: 158 PQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPGYGPIISSL 217
Query: 187 PQQLSRFQF 196
PQ LSRF F
Sbjct: 218 PQLLSRFNF 225
BLAST of Sed0002542 vs. ExPASy Swiss-Prot
Match:
Q6DJE4 (Cleavage and polyadenylation specificity factor subunit 5 OS=Xenopus laevis OX=8355 GN=nudt21 PE=2 SV=1)
HSP 1 Score: 249.2 bits (635), Expect = 3.9e-65
Identity = 116/189 (61.38%), Postives = 140/189 (74.07%), Query Frame = 0
Query: 7 VNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILL 66
+N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH+ PH+LL
Sbjct: 37 INLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLL 96
Query: 67 LQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLGAHSPAHQPDWQIGECVAIWWRPNFET 126
LQ+G TF KLPGG L PGE+E++GLKR +T LG Q DW I +C+ WWRPNFE
Sbjct: 97 LQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVQQ-DWVIDDCIGNWWRPNFEP 156
Query: 127 VMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTI 186
YPY P HITKPKE KKLF+V L E+ FAVPKN KL+A PLFELYDN YGP+IS++
Sbjct: 157 PQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPGYGPIISSL 216
Query: 187 PQQLSRFQF 196
PQ LSRF F
Sbjct: 217 PQLLSRFNF 224
BLAST of Sed0002542 vs. ExPASy Swiss-Prot
Match:
Q3ZCA2 (Cleavage and polyadenylation specificity factor subunit 5 OS=Bos taurus OX=9913 GN=NUDT21 PE=2 SV=1)
HSP 1 Score: 248.1 bits (632), Expect = 8.7e-65
Identity = 116/189 (61.38%), Postives = 140/189 (74.07%), Query Frame = 0
Query: 7 VNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILL 66
+N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH+ PH+LL
Sbjct: 37 INLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLL 96
Query: 67 LQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLGAHSPAHQPDWQIGECVAIWWRPNFET 126
LQ+G TF KLPGG L PGE+E++GLKR +T LG Q DW I +C+ WWRPNFE
Sbjct: 97 LQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQ-DWVIDDCIGNWWRPNFEP 156
Query: 127 VMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTI 186
YPY P HITKPKE KKLF+V L E+ FAVPKN KL+A PLFELYDN YGP+IS++
Sbjct: 157 PQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPGYGPIISSL 216
Query: 187 PQQLSRFQF 196
PQ LSRF F
Sbjct: 217 PQLLSRFNF 224
BLAST of Sed0002542 vs. ExPASy Swiss-Prot
Match:
O43809 (Cleavage and polyadenylation specificity factor subunit 5 OS=Homo sapiens OX=9606 GN=NUDT21 PE=1 SV=1)
HSP 1 Score: 248.1 bits (632), Expect = 8.7e-65
Identity = 116/189 (61.38%), Postives = 140/189 (74.07%), Query Frame = 0
Query: 7 VNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILL 66
+N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH+ PH+LL
Sbjct: 37 INLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLL 96
Query: 67 LQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLGAHSPAHQPDWQIGECVAIWWRPNFET 126
LQ+G TF KLPGG L PGE+E++GLKR +T LG Q DW I +C+ WWRPNFE
Sbjct: 97 LQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQ-DWVIDDCIGNWWRPNFEP 156
Query: 127 VMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTI 186
YPY P HITKPKE KKLF+V L E+ FAVPKN KL+A PLFELYDN YGP+IS++
Sbjct: 157 PQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPGYGPIISSL 216
Query: 187 PQQLSRFQF 196
PQ LSRF F
Sbjct: 217 PQLLSRFNF 224
BLAST of Sed0002542 vs. ExPASy TrEMBL
Match:
A0A6J1IEE3 (Pre-mRNA cleavage factor Im 25 kDa subunit OS=Cucurbita maxima OX=3661 GN=LOC111473295 PE=3 SV=1)
HSP 1 Score: 410.6 bits (1054), Expect = 3.8e-111
Identity = 197/200 (98.50%), Postives = 199/200 (99.50%), Query Frame = 0
Query: 1 MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHK 60
MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHK
Sbjct: 1 MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHK 60
Query: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLGAHSPAHQPDWQIGECVAIWW 120
HPHILLLQIGNTFCKLPGGRLKPGENEI+GLKRKLTSKLGA+SPA QPDWQIGECVAIWW
Sbjct: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALQPDWQIGECVAIWW 120
Query: 121 RPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
RPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
Query: 181 PVISTIPQQLSRFQFNMITT 201
PVISTIPQQLSRFQFNMITT
Sbjct: 181 PVISTIPQQLSRFQFNMITT 200
BLAST of Sed0002542 vs. ExPASy TrEMBL
Match:
A0A6J1D153 (Pre-mRNA cleavage factor Im 25 kDa subunit OS=Momordica charantia OX=3673 GN=LOC111016395 PE=3 SV=1)
HSP 1 Score: 410.6 bits (1054), Expect = 3.8e-111
Identity = 197/200 (98.50%), Postives = 199/200 (99.50%), Query Frame = 0
Query: 1 MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHK 60
MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHK
Sbjct: 1 MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHK 60
Query: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLGAHSPAHQPDWQIGECVAIWW 120
HPHILLLQIGNTFCKLPGGRLKPGENEI+GLKRKLTSKLGA+SPA QPDWQIGECVAIWW
Sbjct: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALQPDWQIGECVAIWW 120
Query: 121 RPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
RPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
Query: 181 PVISTIPQQLSRFQFNMITT 201
PVISTIPQQLSRFQFNMITT
Sbjct: 181 PVISTIPQQLSRFQFNMITT 200
BLAST of Sed0002542 vs. ExPASy TrEMBL
Match:
A0A6J1GGL6 (Pre-mRNA cleavage factor Im 25 kDa subunit OS=Cucurbita moschata OX=3662 GN=LOC111453755 PE=3 SV=1)
HSP 1 Score: 410.6 bits (1054), Expect = 3.8e-111
Identity = 197/200 (98.50%), Postives = 199/200 (99.50%), Query Frame = 0
Query: 1 MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHK 60
MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHK
Sbjct: 1 MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHK 60
Query: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLGAHSPAHQPDWQIGECVAIWW 120
HPHILLLQIGNTFCKLPGGRLKPGENEI+GLKRKLTSKLGA+SPA QPDWQIGECVAIWW
Sbjct: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALQPDWQIGECVAIWW 120
Query: 121 RPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
RPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
Query: 181 PVISTIPQQLSRFQFNMITT 201
PVISTIPQQLSRFQFNMITT
Sbjct: 181 PVISTIPQQLSRFQFNMITT 200
BLAST of Sed0002542 vs. ExPASy TrEMBL
Match:
A0A5D3D0Y8 (Pre-mRNA cleavage factor Im 25 kDa subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004570 PE=3 SV=1)
HSP 1 Score: 409.5 bits (1051), Expect = 8.4e-111
Identity = 196/200 (98.00%), Postives = 199/200 (99.50%), Query Frame = 0
Query: 1 MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHK 60
MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHK
Sbjct: 1 MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHK 60
Query: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLGAHSPAHQPDWQIGECVAIWW 120
HPHILLLQIGNTFCKLPGGRLKPGENEI+GLKRKLTSKLGA+SP+ QPDWQIGECVAIWW
Sbjct: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPSLQPDWQIGECVAIWW 120
Query: 121 RPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
RPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
Query: 181 PVISTIPQQLSRFQFNMITT 201
PVISTIPQQLSRFQFNMITT
Sbjct: 181 PVISTIPQQLSRFQFNMITT 200
BLAST of Sed0002542 vs. ExPASy TrEMBL
Match:
A0A0A0L8Y2 (Pre-mRNA cleavage factor Im 25 kDa subunit OS=Cucumis sativus OX=3659 GN=Csa_3G122550 PE=3 SV=1)
HSP 1 Score: 409.5 bits (1051), Expect = 8.4e-111
Identity = 196/200 (98.00%), Postives = 199/200 (99.50%), Query Frame = 0
Query: 1 MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHK 60
MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHK
Sbjct: 1 MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHK 60
Query: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLGAHSPAHQPDWQIGECVAIWW 120
HPHILLLQIGNTFCKLPGGRLKPGENEI+GLKRKLTSKLGA+SP+ QPDWQIGECVAIWW
Sbjct: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPSLQPDWQIGECVAIWW 120
Query: 121 RPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
RPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
Query: 181 PVISTIPQQLSRFQFNMITT 201
PVISTIPQQLSRFQFNMITT
Sbjct: 181 PVISTIPQQLSRFQFNMITT 200
BLAST of Sed0002542 vs. TAIR 10
Match:
AT4G25550.1 (Cleavage/polyadenylation specificity factor, 25kDa subunit )
HSP 1 Score: 375.2 bits (962), Expect = 3.4e-104
Identity = 176/200 (88.00%), Postives = 187/200 (93.50%), Query Frame = 0
Query: 1 MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHK 60
M S VVNTYPLS+Y+FGTKEPKLEKDTSVADRLARMK+NYMKEGMRTSVE ILLVQEH
Sbjct: 1 MAMSQVVNTYPLSNYSFGTKEPKLEKDTSVADRLARMKINYMKEGMRTSVEGILLVQEHN 60
Query: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLGAHSPAHQPDWQIGECVAIWW 120
HPHILLLQIGNTFCKLPGGRLKPGENE DGLKRKLTSKLG +S A PDW +GECVA WW
Sbjct: 61 HPHILLLQIGNTFCKLPGGRLKPGENEADGLKRKLTSKLGGNSAALVPDWTVGECVATWW 120
Query: 121 RPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
RPNFET+MYPYCPPHITKPKECK+L+IVHLSE+EYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETMMYPYCPPHITKPKECKRLYIVHLSEKEYFAVPKNLKLLAVPLFELYDNVQRYG 180
Query: 181 PVISTIPQQLSRFQFNMITT 201
PVISTIPQQLSRF FNMI++
Sbjct: 181 PVISTIPQQLSRFHFNMISS 200
BLAST of Sed0002542 vs. TAIR 10
Match:
AT4G29820.1 (homolog of CFIM-25 )
HSP 1 Score: 240.7 bits (613), Expect = 9.9e-64
Identity = 109/193 (56.48%), Postives = 145/193 (75.13%), Query Frame = 0
Query: 6 VVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHIL 65
+V+ YPLSSY FG+KE KD ++DR+ R+K NY G+RT VEA+LLV+ KHPH+L
Sbjct: 28 MVDLYPLSSYYFGSKEALRVKDEIISDRVIRLKSNYAAHGLRTCVEAVLLVELFKHPHVL 87
Query: 66 LLQIGNTFCKLPGGRLKPGENEIDGLKRKLTSKLGAHSPAHQPDWQIGECVAIWWRPNFE 125
LLQ N+ KLPGGRL+PGE++I+GLKRKL SKL + +++GEC+ +WWRPNFE
Sbjct: 88 LLQYRNSIFKLPGGRLRPGESDIEGLKRKLASKLSVNENVGVSGYEVGECIGMWWRPNFE 147
Query: 126 TVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVIST 185
T+MYP+ PP+I PKEC KLF+V L + F VPKN KLLAVPL +L++N + YGP++S
Sbjct: 148 TLMYPFLPPNIKHPKECTKLFLVRLPVHQQFVVPKNFKLLAVPLCQLHENEKTYGPIMSQ 207
Query: 186 IPQQLSRFQFNMI 199
IP+ LS+F FNM+
Sbjct: 208 IPKLLSKFSFNMM 220
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022147484.1 | 7.8e-111 | 98.50 | pre-mRNA cleavage factor Im 25 kDa subunit 2 [Momordica charantia] >XP_022950750... | [more] |
XP_004133873.1 | 1.7e-110 | 98.00 | pre-mRNA cleavage factor Im 25 kDa subunit 2 [Cucumis sativus] >XP_008438064.1 P... | [more] |
XP_031259563.1 | 7.3e-109 | 96.00 | pre-mRNA cleavage factor Im 25 kDa subunit 2 [Pistacia vera] >XP_031261299.1 pre... | [more] |
XP_022924789.1 | 9.5e-109 | 97.00 | pre-mRNA cleavage factor Im 25 kDa subunit 2 [Cucurbita moschata] >XP_022980420.... | [more] |
XP_021293201.1 | 1.6e-108 | 95.50 | pre-mRNA cleavage factor Im 25 kDa subunit 2 [Herrania umbratica] >EOY23171.1 Cl... | [more] |
Match Name | E-value | Identity | Description | |
Q8GXS3 | 4.7e-103 | 88.00 | Pre-mRNA cleavage factor Im 25 kDa subunit 2 OS=Arabidopsis thaliana OX=3702 GN=... | [more] |
Q7T3C6 | 3.9e-65 | 61.38 | Cleavage and polyadenylation specificity factor subunit 5 OS=Danio rerio OX=7955... | [more] |
Q6DJE4 | 3.9e-65 | 61.38 | Cleavage and polyadenylation specificity factor subunit 5 OS=Xenopus laevis OX=8... | [more] |
Q3ZCA2 | 8.7e-65 | 61.38 | Cleavage and polyadenylation specificity factor subunit 5 OS=Bos taurus OX=9913 ... | [more] |
O43809 | 8.7e-65 | 61.38 | Cleavage and polyadenylation specificity factor subunit 5 OS=Homo sapiens OX=960... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1IEE3 | 3.8e-111 | 98.50 | Pre-mRNA cleavage factor Im 25 kDa subunit OS=Cucurbita maxima OX=3661 GN=LOC111... | [more] |
A0A6J1D153 | 3.8e-111 | 98.50 | Pre-mRNA cleavage factor Im 25 kDa subunit OS=Momordica charantia OX=3673 GN=LOC... | [more] |
A0A6J1GGL6 | 3.8e-111 | 98.50 | Pre-mRNA cleavage factor Im 25 kDa subunit OS=Cucurbita moschata OX=3662 GN=LOC1... | [more] |
A0A5D3D0Y8 | 8.4e-111 | 98.00 | Pre-mRNA cleavage factor Im 25 kDa subunit OS=Cucumis melo var. makuwa OX=119469... | [more] |
A0A0A0L8Y2 | 8.4e-111 | 98.00 | Pre-mRNA cleavage factor Im 25 kDa subunit OS=Cucumis sativus OX=3659 GN=Csa_3G1... | [more] |
Match Name | E-value | Identity | Description | |
AT4G25550.1 | 3.4e-104 | 88.00 | Cleavage/polyadenylation specificity factor, 25kDa subunit | [more] |
AT4G29820.1 | 9.9e-64 | 56.48 | homolog of CFIM-25 | [more] |