Sed0001813 (gene) Chayote v1

Overview
NameSed0001813
Typegene
OrganismSechium edule (Chayote v1)
Descriptionprotein ROOT PRIMORDIUM DEFECTIVE 1
LocationLG09: 35723067 .. 35726576 (-)
RNA-Seq ExpressionSed0001813
SyntenySed0001813
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCTCCAATCCCCAATCTCTCTTCTCGCATCTGCGCACCTTCAAATCCGTTCAATCCTCTTTCACAAACCCAGAAATCGTCTCCCAAATCCGATCCATTTCCAGTTTGAAGGTGATTTGGCGCAAGGATTCCAAATTGGACGAAGCGATCGAGAACGACAAGCGCTACAAGCTGTGCGCGCGCGTCGTCAGGGAGGTGCTCAGCGAGCCGGGGCAGGTGATGCCGCTTCGATATCTTGAGAAACGGCGACAGAGATTGCGCCTCAATGTCAAAATCCAGACGTTTCTGAGCCGGAATCCAGGTTTGTTTGATACTTACTATGATAAAATCAAGCCTAAGTCTGATCCGGTTTTGTTCTTGCGTTCGAGTGATCGACTTAGGGAGTTTTTAGAAGAGGAAAAGAGGATTGTGGTGGATAACGAAGAGGTGATTGTGTCGAAATTGTGTAAGTTGTTGATGATGTCGAAGGATAATTTTCTTAGTGTTGATAAATTAGTTCATGTTAAGAGGGATTTCGGGTTTCCGAATGATTTTTTGGTCGATTTGGTGCCGAAATACCCTGAGTACTTTCAGATTGTTGGGAGTCCTGGTGAGGGGAAATCGTTTCTTCAATTGGTTTCTCGAAACCCTAACTTTGCAAAATCGGTGATTGAGAGAAGAGCTGAGGATGAATCGAGATCGACGGGGGTTCGTGTTCGGCCGAATTTCAACTACAATCTTCCTCCTGGTTTCTTCTTAAGAAAAGAAATGAGGGAATGGGTTAGGGATTGGTTAGAATTAGATTACATATCACCATACGAGGATGTGTCTCATTTGGCTCAATCTTCGCCCGAGATGGAGAAGCGAACAGTTGGAGTTTTTCACGAGTTGCTATCGCTCTCATTGTTTAAGAGGATTGCGGTGCCAACATTGGGGAAATTTAGTGATGAGTATCGGTTTTCTAATGCATTTTCGAGTGCGTTCACGAGGCATTCGGGGATATTCTATATGTCTTTGAAAGGTGGGATTGAGACTGCGATGCTTCGAGAGGCGTATAAGGGTGATCAGTTGATTGATTGTGATCCATTGCTTGAAATAAAAGATAAGTTTGTGGAGTTGTTGGAAGTAGGATGGAAGGAGAGGGCTGAGCAGCGAAGGCAACAGGGAAAACAACTCAAGGAGGACATGGAATTCGTGGCTACAAGGGCTGAGTATGGCGAGGAGAATGACCCTCCCAGGTAAATAAGTTTTTGAGAAAATTTCATTTTTAAACGTATTTTACCTCCAAACTCTTAATTTAATTGAGTTGAATTGTCCACTTGAATGTGCCTTTTTTTTTTTTTTTTTTTCAATTCGTGTGTGTTGGTCTAGCACTTCGCCTGTTTATACCCTACAACATTTGATTGTCAACATAATTGTTGGAAATTAATTACTAGGTAGGTGGTCGTCATAGATTGAACTCTTCTTTTCTGGATATAAAATGATAATATCATTCATAAAATAAGAGTGTTCCCAGTCCCTAAGGGGTGTCACGGAACTTGAAGGCTTGAGTTTTGAAGGTGTGTTTCCTTCAAGGCCTCAAGTTCAAGACTCACATGTGACAACCTCCTGTGTCTCCATTCCTTCGATGTCTCTCAGTGCCTAACCTAGGGACATGAGTGTTTACCCCAGATATAGTGGAGAGCTTCGATTTCCAAAGAAAAAAAAGTGTTTTAGTGGGGAGAGCCAAGTTTTGCTTTTTTTTTTGTTTGATATCCGTTACTGTCCGGGCTTGCTTGCGTGCACCTCAACTAATGTCACAAGACATACAACCTGACCCTACAACATTTGGATGTCAAGGAAACTTGTAGGTAATTTATTTCTAGGTAGGTGACCACCATGGATTGAACCCATCACCTTAAGCACCCCAAGACTCTCTTTGACCACTTAGGCCACTCCATGATGGTTTCAAGTTTTGCTCTTCTTTACAATGAGATAACACGGAAAATAAACAAGTTTGTAGCTCTCGGGAAGTTGAATATCCAACTTATGATCCTAAGAGGGTAGAGCTTGCGGATCTGCTGGATTATTTCATGAATGCCTATACATAGATTGAACTCATAAGTTATGATTTATTTAGACTTCAAAAAATCGCAACGTTCCGATTCAAGAACGAAACTTACGATTTAGGCCACTTGAAACGTACGATTCAAGTGATTTACGATTCAAACTTGTGTTTTAAATTAACTCCGATTCGTTTTGAATCATACGATTCAAAACGTGAGAAACACGTTTTTTACAACCATGCTCATAACCTCTTAATAGTCAAACCAACTCACGATGATTTCAACTTGAATATGTCCTTAAACTAGTGGTTGTCTCTGGCATAGTGCCCTAATTTTTTTGACCGACATTGGAGAACCTCTACTCAAGCTTAACAAAATTTAGCCTTACAACACAGCCACAATGATTATTCTAGCTGCCCTTTATGGACTAGGACTCTTACGTCCATCCATTATTACGTTATGATAAATCTTCTACTATGGATTTATGGGAAGAACTTCAAATGATCAAGGAAGTTCTTTACATGGAATGTACGAGGCCTAGGTTTTGTGGAAAACCGGCCTTGATCAAGAAACCCATACAAAAACAAAATCTGAAGTCGTGCTTACTGCTTAGAGGGGATGAGCTCAATTCATGCTCATGGCAGTCACCTACCAAGGAATTAATTTCTTATAAATTTCCTTGACAACCAAACATGGAGCGAGATAAAATGGTTTTCTCATGAGAATAGTGGATATGTATATAAAGTGGCCTAGGATATATATCGAAAAATCTATGATTTATTCTCTAACAAGAGACGAAGCTACTTCAATTAATTATCCATTGATTCAATTTGTCTGAAGTTCATCACAATTTGGCTTGTGATTGCTGGTGTTTTTTTTATAAATTTTTAAATTATCCGTGAAGCCATTTTACGCACATTTTGACTATTTTCAAGATATATCATTTGACCTTACAACAATTGGTTGTCAAGGAAATCATATTACTTCTTACTTCTTATGTAGGTGGCTATCATGAACCTATAACCTCTTAATTTTCTAACGTCTTAATCATCGGGTCATTTTGTGATGGTTTGTGCTTTCCGTTAGAATCTTTGCTAAAGAGAAATGAATATTATTCTTTCAAATGCCTTTGGCGTGTTGCAAGGGAAATTATTGTTTTATTATGTATATACTTCTTAATGAGGCGAAAGATTCCATTTATATTCTTGGACTATATTTGTTCATGCTATAAGTGATGTAGGAAAAAAAATGGTTGTAGTTTTCACTGGGTAGAAAAACTTCTCATCTGATTACTAAGAAGAAAATTTCTTAAATGGGATTTACAACCCCACAAGATAGAGACCTGTTTTTATATGTTTAATTCATTTACCGTTGAAGCTTTGAAATAAGTACTTTCTTTTTTCTAATAGTTCATCTTGCTTGTTTCATATATTTCAGGAATGAGCTCAGCAAGATTGTGATGAAGATTATTAACTCATCATGA

mRNA sequence

ATGATCTCCAATCCCCAATCTCTCTTCTCGCATCTGCGCACCTTCAAATCCGTTCAATCCTCTTTCACAAACCCAGAAATCGTCTCCCAAATCCGATCCATTTCCAGTTTGAAGGTGATTTGGCGCAAGGATTCCAAATTGGACGAAGCGATCGAGAACGACAAGCGCTACAAGCTGTGCGCGCGCGTCGTCAGGGAGGTGCTCAGCGAGCCGGGGCAGGTGATGCCGCTTCGATATCTTGAGAAACGGCGACAGAGATTGCGCCTCAATGTCAAAATCCAGACGTTTCTGAGCCGGAATCCAGGTTTGTTTGATACTTACTATGATAAAATCAAGCCTAAGTCTGATCCGGTTTTGTTCTTGCGTTCGAGTGATCGACTTAGGGAGTTTTTAGAAGAGGAAAAGAGGATTGTGGTGGATAACGAAGAGGTGATTGTGTCGAAATTGTGTAAGTTGTTGATGATGTCGAAGGATAATTTTCTTAGTGTTGATAAATTAGTTCATGTTAAGAGGGATTTCGGGTTTCCGAATGATTTTTTGGTCGATTTGGTGCCGAAATACCCTGAGTACTTTCAGATTGTTGGGAGTCCTGGTGAGGGGAAATCGTTTCTTCAATTGGTTTCTCGAAACCCTAACTTTGCAAAATCGGTGATTGAGAGAAGAGCTGAGGATGAATCGAGATCGACGGGGGTTCGTGTTCGGCCGAATTTCAACTACAATCTTCCTCCTGGTTTCTTCTTAAGAAAAGAAATGAGGGAATGGGTTAGGGATTGGTTAGAATTAGATTACATATCACCATACGAGGATGTGTCTCATTTGGCTCAATCTTCGCCCGAGATGGAGAAGCGAACAGTTGGAGTTTTTCACGAGTTGCTATCGCTCTCATTGTTTAAGAGGATTGCGGTGCCAACATTGGGGAAATTTAGTGATGAGTATCGGTTTTCTAATGCATTTTCGAGTGCGTTCACGAGGCATTCGGGGATATTCTATATGTCTTTGAAAGGTGGGATTGAGACTGCGATGCTTCGAGAGGCGTATAAGGGTGATCAGTTGATTGATTGTGATCCATTGCTTGAAATAAAAGATAAGTTTGTGGAGTTGTTGGAAGTAGGATGGAAGGAGAGGGCTGAGCAGCGAAGGCAACAGGGAAAACAACTCAAGGAGGACATGGAATTCGTGGCTACAAGGGCTGAGTATGGCGAGGAGAATGACCCTCCCAGGAATGAGCTCAGCAAGATTGTGATGAAGATTATTAACTCATCATGA

Coding sequence (CDS)

ATGATCTCCAATCCCCAATCTCTCTTCTCGCATCTGCGCACCTTCAAATCCGTTCAATCCTCTTTCACAAACCCAGAAATCGTCTCCCAAATCCGATCCATTTCCAGTTTGAAGGTGATTTGGCGCAAGGATTCCAAATTGGACGAAGCGATCGAGAACGACAAGCGCTACAAGCTGTGCGCGCGCGTCGTCAGGGAGGTGCTCAGCGAGCCGGGGCAGGTGATGCCGCTTCGATATCTTGAGAAACGGCGACAGAGATTGCGCCTCAATGTCAAAATCCAGACGTTTCTGAGCCGGAATCCAGGTTTGTTTGATACTTACTATGATAAAATCAAGCCTAAGTCTGATCCGGTTTTGTTCTTGCGTTCGAGTGATCGACTTAGGGAGTTTTTAGAAGAGGAAAAGAGGATTGTGGTGGATAACGAAGAGGTGATTGTGTCGAAATTGTGTAAGTTGTTGATGATGTCGAAGGATAATTTTCTTAGTGTTGATAAATTAGTTCATGTTAAGAGGGATTTCGGGTTTCCGAATGATTTTTTGGTCGATTTGGTGCCGAAATACCCTGAGTACTTTCAGATTGTTGGGAGTCCTGGTGAGGGGAAATCGTTTCTTCAATTGGTTTCTCGAAACCCTAACTTTGCAAAATCGGTGATTGAGAGAAGAGCTGAGGATGAATCGAGATCGACGGGGGTTCGTGTTCGGCCGAATTTCAACTACAATCTTCCTCCTGGTTTCTTCTTAAGAAAAGAAATGAGGGAATGGGTTAGGGATTGGTTAGAATTAGATTACATATCACCATACGAGGATGTGTCTCATTTGGCTCAATCTTCGCCCGAGATGGAGAAGCGAACAGTTGGAGTTTTTCACGAGTTGCTATCGCTCTCATTGTTTAAGAGGATTGCGGTGCCAACATTGGGGAAATTTAGTGATGAGTATCGGTTTTCTAATGCATTTTCGAGTGCGTTCACGAGGCATTCGGGGATATTCTATATGTCTTTGAAAGGTGGGATTGAGACTGCGATGCTTCGAGAGGCGTATAAGGGTGATCAGTTGATTGATTGTGATCCATTGCTTGAAATAAAAGATAAGTTTGTGGAGTTGTTGGAAGTAGGATGGAAGGAGAGGGCTGAGCAGCGAAGGCAACAGGGAAAACAACTCAAGGAGGACATGGAATTCGTGGCTACAAGGGCTGAGTATGGCGAGGAGAATGACCCTCCCAGGAATGAGCTCAGCAAGATTGTGATGAAGATTATTAACTCATCATGA

Protein sequence

MISNPQSLFSHLRTFKSVQSSFTNPEIVSQIRSISSLKVIWRKDSKLDEAIENDKRYKLCARVVREVLSEPGQVMPLRYLEKRRQRLRLNVKIQTFLSRNPGLFDTYYDKIKPKSDPVLFLRSSDRLREFLEEEKRIVVDNEEVIVSKLCKLLMMSKDNFLSVDKLVHVKRDFGFPNDFLVDLVPKYPEYFQIVGSPGEGKSFLQLVSRNPNFAKSVIERRAEDESRSTGVRVRPNFNYNLPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQSSPEMEKRTVGVFHELLSLSLFKRIAVPTLGKFSDEYRFSNAFSSAFTRHSGIFYMSLKGGIETAMLREAYKGDQLIDCDPLLEIKDKFVELLEVGWKERAEQRRQQGKQLKEDMEFVATRAEYGEENDPPRNELSKIVMKIINSS
Homology
BLAST of Sed0001813 vs. NCBI nr
Match: KAG7014426.1 (Protein ROOT PRIMORDIUM DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 679.1 bits (1751), Expect = 2.4e-191
Identity = 336/398 (84.42%), Postives = 368/398 (92.46%), Query Frame = 0

Query: 1   MISNPQSLFSHLRTFKSVQSSFTNPEIVSQIRSISSLKVIWRKDSKLDEAIENDKRYKLC 60
           M+S P +LFS+LR+FKS QS F   + V QIR++SSLKVIWRKDS+LDEAIENDKRYKLC
Sbjct: 1   MLSKPYALFSYLRSFKSAQSCFVRRKFVLQIRAVSSLKVIWRKDSRLDEAIENDKRYKLC 60

Query: 61  ARVVREVLSEPGQVMPLRYLEKRRQRLRLNVKIQTFLSRNPGLFDTYYDKIKPKSDPVLF 120
           ARVVREVL+EPGQV+PLRYLEKRRQRLRLNV I+TF+S NPGL DTYYD+IKPKS+PVLF
Sbjct: 61  ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPGLLDTYYDRIKPKSEPVLF 120

Query: 121 LRSSDRLREFLEEEKRIVVDNEEVIVSKLCKLLMMSKDNFLSVDKLVHVKRDFGFPNDFL 180
           LR SDRLR FLEEEKRI ++NE +IVSKLCKLLM+SKD  LSVDKLV VKR+FGFPNDFL
Sbjct: 121 LRPSDRLRGFLEEEKRITMENEALIVSKLCKLLMISKDKVLSVDKLVQVKREFGFPNDFL 180

Query: 181 VDLVPKYPEYFQIVGSPGEGKSFLQLVSRNPNFAKSVIERRAEDESRSTGVRVRPNFNYN 240
           V+LVPKYPEYFQI+GSPG+ KSFLQLVSRNP+FAKSVIERRAEDES STG+ +RPNFNYN
Sbjct: 181 VNLVPKYPEYFQIIGSPGDEKSFLQLVSRNPDFAKSVIERRAEDESISTGIDIRPNFNYN 240

Query: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQSSPEMEKRTVGVFHELLSLSLFKRI 300
           LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQ+SPEMEKRTVGVFHELLSLSLFKRI
Sbjct: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTVGVFHELLSLSLFKRI 300

Query: 301 AVPTLGKFSDEYRFSNAFSSAFTRHSGIFYMSLKGGIETAMLREAYKGDQLIDCDPLLEI 360
            VP LGKFSDEYRFSNAFSS FTRHSGIFY+SLKGGIETAMLREAYKG QLIDCDPLLEI
Sbjct: 301 PVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLLEI 360

Query: 361 KDKFVELLEVGWKERAEQRRQQGKQLKEDMEFVATRAE 399
           KDKFVELLE GW+ERAEQRRQQ KQ++ DMEF+A RA+
Sbjct: 361 KDKFVELLEEGWRERAEQRRQQAKQVRNDMEFMAARAD 398

BLAST of Sed0001813 vs. NCBI nr
Match: XP_022992526.1 (protein WHAT'S THIS FACTOR 1 homolog [Cucurbita maxima] >XP_022992527.1 protein WHAT'S THIS FACTOR 1 homolog [Cucurbita maxima] >XP_022992528.1 protein WHAT'S THIS FACTOR 1 homolog [Cucurbita maxima] >XP_022992529.1 protein WHAT'S THIS FACTOR 1 homolog [Cucurbita maxima] >XP_022992530.1 protein WHAT'S THIS FACTOR 1 homolog [Cucurbita maxima] >XP_022992531.1 protein WHAT'S THIS FACTOR 1 homolog [Cucurbita maxima])

HSP 1 Score: 679.1 bits (1751), Expect = 2.4e-191
Identity = 334/398 (83.92%), Postives = 369/398 (92.71%), Query Frame = 0

Query: 1   MISNPQSLFSHLRTFKSVQSSFTNPEIVSQIRSISSLKVIWRKDSKLDEAIENDKRYKLC 60
           M+S P +LFS+LR+FKS QSSF   +   QIR++SSLKVIWRKDS+LDEAIENDKRYKLC
Sbjct: 1   MLSTPYALFSYLRSFKSAQSSFVRRKFFLQIRAVSSLKVIWRKDSRLDEAIENDKRYKLC 60

Query: 61  ARVVREVLSEPGQVMPLRYLEKRRQRLRLNVKIQTFLSRNPGLFDTYYDKIKPKSDPVLF 120
           ARVVREVL+EPGQV+PLRYLEKRRQRLRLNV I+TF+S NPGL +TY D+IKPKS+PVLF
Sbjct: 61  ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPGLLNTYCDRIKPKSEPVLF 120

Query: 121 LRSSDRLREFLEEEKRIVVDNEEVIVSKLCKLLMMSKDNFLSVDKLVHVKRDFGFPNDFL 180
           LR SDRLR FLEEEKRI ++NE ++VSKLCKLLM+SKD  LSVDKLVHVKR+FGFPNDFL
Sbjct: 121 LRPSDRLRGFLEEEKRITMENEALLVSKLCKLLMISKDKLLSVDKLVHVKREFGFPNDFL 180

Query: 181 VDLVPKYPEYFQIVGSPGEGKSFLQLVSRNPNFAKSVIERRAEDESRSTGVRVRPNFNYN 240
           V+LVPKYPEYFQI+GSPG+ KSFLQLVSRNPNFAKSVIERRAEDES STG+++RPNFNYN
Sbjct: 181 VNLVPKYPEYFQIIGSPGDEKSFLQLVSRNPNFAKSVIERRAEDESISTGIQIRPNFNYN 240

Query: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQSSPEMEKRTVGVFHELLSLSLFKRI 300
           LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQ+SPEMEKRTVG+FHELLSLSLFKRI
Sbjct: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTVGIFHELLSLSLFKRI 300

Query: 301 AVPTLGKFSDEYRFSNAFSSAFTRHSGIFYMSLKGGIETAMLREAYKGDQLIDCDPLLEI 360
            VP LGKFSDEYRFSNAFSS FTRHSGIFY+SLKGGIETAMLREAYKG QLIDCDPLLEI
Sbjct: 301 PVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLLEI 360

Query: 361 KDKFVELLEVGWKERAEQRRQQGKQLKEDMEFVATRAE 399
           KDKFVELLE GW+ERAEQRRQQ KQ++ DMEF+A RA+
Sbjct: 361 KDKFVELLEEGWRERAEQRRQQAKQVRNDMEFMAARAD 398

BLAST of Sed0001813 vs. NCBI nr
Match: XP_022953521.1 (protein WHAT'S THIS FACTOR 1 homolog [Cucurbita moschata] >XP_022953522.1 protein WHAT'S THIS FACTOR 1 homolog [Cucurbita moschata] >XP_022953524.1 protein WHAT'S THIS FACTOR 1 homolog [Cucurbita moschata] >XP_022953525.1 protein WHAT'S THIS FACTOR 1 homolog [Cucurbita moschata] >XP_022953526.1 protein WHAT'S THIS FACTOR 1 homolog [Cucurbita moschata])

HSP 1 Score: 678.3 bits (1749), Expect = 4.2e-191
Identity = 336/398 (84.42%), Postives = 368/398 (92.46%), Query Frame = 0

Query: 1   MISNPQSLFSHLRTFKSVQSSFTNPEIVSQIRSISSLKVIWRKDSKLDEAIENDKRYKLC 60
           M+S P +LFS+LR+FKS QS F   + V QIRS+SSLKVIWRKDS+LDEAIENDKRYKLC
Sbjct: 1   MLSTPYALFSYLRSFKSAQSCFVRRKFVLQIRSVSSLKVIWRKDSRLDEAIENDKRYKLC 60

Query: 61  ARVVREVLSEPGQVMPLRYLEKRRQRLRLNVKIQTFLSRNPGLFDTYYDKIKPKSDPVLF 120
           ARVVREVL+EPGQV+PLRYLEKRRQRLRLNV I+TF+S NPGL +TYYD+IKPKS+PVLF
Sbjct: 61  ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPGLLNTYYDRIKPKSEPVLF 120

Query: 121 LRSSDRLREFLEEEKRIVVDNEEVIVSKLCKLLMMSKDNFLSVDKLVHVKRDFGFPNDFL 180
           LR SDRLR FLEEEKRI ++NE +IVSKLCKLLM+SKD  LSVDKLV VKR+FGFPNDFL
Sbjct: 121 LRPSDRLRGFLEEEKRITMENEALIVSKLCKLLMISKDKVLSVDKLVQVKREFGFPNDFL 180

Query: 181 VDLVPKYPEYFQIVGSPGEGKSFLQLVSRNPNFAKSVIERRAEDESRSTGVRVRPNFNYN 240
           V+LVPKYPEYFQI+GSPG+ KSFLQLVSRNP+FAKSVIERRAEDES STG+ +RPNFNYN
Sbjct: 181 VNLVPKYPEYFQIIGSPGDEKSFLQLVSRNPDFAKSVIERRAEDESISTGIDIRPNFNYN 240

Query: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQSSPEMEKRTVGVFHELLSLSLFKRI 300
           LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQ+SPEMEKRTVGVFHELLSLSLFKRI
Sbjct: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTVGVFHELLSLSLFKRI 300

Query: 301 AVPTLGKFSDEYRFSNAFSSAFTRHSGIFYMSLKGGIETAMLREAYKGDQLIDCDPLLEI 360
            VP LGKFSDEYRFSNAFSS FTRHSGIFY+SLKGGIETAMLREAYKG QLIDCDPLLEI
Sbjct: 301 PVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLLEI 360

Query: 361 KDKFVELLEVGWKERAEQRRQQGKQLKEDMEFVATRAE 399
           KDKFVELLE GW+ERAEQRRQQ KQ++ DMEF+A RA+
Sbjct: 361 KDKFVELLEEGWRERAEQRRQQAKQVRNDMEFMAARAD 398

BLAST of Sed0001813 vs. NCBI nr
Match: KAG6575893.1 (Protein WHAT'S THIS FACTOR 1-like, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 677.6 bits (1747), Expect = 7.1e-191
Identity = 335/398 (84.17%), Postives = 367/398 (92.21%), Query Frame = 0

Query: 1   MISNPQSLFSHLRTFKSVQSSFTNPEIVSQIRSISSLKVIWRKDSKLDEAIENDKRYKLC 60
           M+S P +LFS+LR+FKS QS F   + V QIR++SSLKVIWRKDS+LDEAIENDKRYKLC
Sbjct: 1   MLSKPYALFSYLRSFKSAQSCFVRRKFVLQIRAVSSLKVIWRKDSRLDEAIENDKRYKLC 60

Query: 61  ARVVREVLSEPGQVMPLRYLEKRRQRLRLNVKIQTFLSRNPGLFDTYYDKIKPKSDPVLF 120
           ARVVREVL+EPGQV+PLRYLEKRRQRLRLNV I+TF+S NPGL DTYYD+IKPKS+PVLF
Sbjct: 61  ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPGLLDTYYDRIKPKSEPVLF 120

Query: 121 LRSSDRLREFLEEEKRIVVDNEEVIVSKLCKLLMMSKDNFLSVDKLVHVKRDFGFPNDFL 180
           LR SDRLR FLEEEKRI ++NE +IVSKLCKLLM+SKD  LSVDKLV VKR+FGFPNDFL
Sbjct: 121 LRPSDRLRGFLEEEKRITMENEALIVSKLCKLLMISKDKVLSVDKLVQVKREFGFPNDFL 180

Query: 181 VDLVPKYPEYFQIVGSPGEGKSFLQLVSRNPNFAKSVIERRAEDESRSTGVRVRPNFNYN 240
           V+LVPKYPEYFQI+GSPG+ KSFLQLVSRNP+FAKSVIERRAEDES STG+ +RPNFNYN
Sbjct: 181 VNLVPKYPEYFQIIGSPGDEKSFLQLVSRNPDFAKSVIERRAEDESISTGIDIRPNFNYN 240

Query: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQSSPEMEKRTVGVFHELLSLSLFKRI 300
           LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQ+SPEMEKRTVGVFHELLSLSLFKRI
Sbjct: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTVGVFHELLSLSLFKRI 300

Query: 301 AVPTLGKFSDEYRFSNAFSSAFTRHSGIFYMSLKGGIETAMLREAYKGDQLIDCDPLLEI 360
            VP LGKFSDEYRFSNAFSS FTRHSGIFY+SLKGGIETAMLREAYKG QLIDCDPL EI
Sbjct: 301 PVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLFEI 360

Query: 361 KDKFVELLEVGWKERAEQRRQQGKQLKEDMEFVATRAE 399
           KDKFVELLE GW+ERAEQRRQQ KQ++ DMEF+A RA+
Sbjct: 361 KDKFVELLEEGWRERAEQRRQQAKQVRNDMEFMAARAD 398

BLAST of Sed0001813 vs. NCBI nr
Match: XP_038899043.1 (protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Benincasa hispida])

HSP 1 Score: 670.6 bits (1729), Expect = 8.7e-189
Identity = 334/396 (84.34%), Postives = 365/396 (92.17%), Query Frame = 0

Query: 1   MISNPQSLFSHLRTFKSVQSSFTNPEIVSQIRSISSLKVIWRKDSKLDEAIENDKRYKLC 60
           M+S P +LFS LR+FKS   S  + EIV QIR ISSLKVIWRKD +LDEAIENDKRYKLC
Sbjct: 1   MLSTPHTLFSCLRSFKSAHPSLLSQEIVFQIRHISSLKVIWRKDYRLDEAIENDKRYKLC 60

Query: 61  ARVVREVLSEPGQVMPLRYLEKRRQRLRLNVKIQTFLSRNPGLFDTYYDKIKPKSDPVLF 120
           ARVVREVL+EPGQV+PLRYLEKRRQRLRLNV ++ F+S NPGLF+TYYD+IKPKS+PVLF
Sbjct: 61  ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSVKMFMSCNPGLFETYYDRIKPKSEPVLF 120

Query: 121 LRSSDRLREFLEEEKRIVVDNEEVIVSKLCKLLMMSKDNFLSVDKLVHVKRDFGFPNDFL 180
           LR+SDRLR FLEEEKRI ++NE +IVSKLCKLLM+SKD  LSVDKLVHVKR+FGFPNDFL
Sbjct: 121 LRASDRLRGFLEEEKRITMENEGLIVSKLCKLLMISKDKMLSVDKLVHVKREFGFPNDFL 180

Query: 181 VDLVPKYPEYFQIVGSPGEGKSFLQLVSRNPNFAKSVIERRAEDESRSTGVRVRPNFNYN 240
           V+LVPKYPEYFQIVGSPGEGKSFLQLVSRNP+FAKSVIERRAEDES STG+R+RPNFNY 
Sbjct: 181 VNLVPKYPEYFQIVGSPGEGKSFLQLVSRNPDFAKSVIERRAEDESISTGIRIRPNFNYK 240

Query: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQSSPEMEKRTVGVFHELLSLSLFKRI 300
           LPPGF LRKEMREWVRDWLELDYISPYEDVSHLAQSSPEMEKRTVGVFHELLSLSLFKRI
Sbjct: 241 LPPGFILRKEMREWVRDWLELDYISPYEDVSHLAQSSPEMEKRTVGVFHELLSLSLFKRI 300

Query: 301 AVPTLGKFSDEYRFSNAFSSAFTRHSGIFYMSLKGGIETAMLREAYKGDQLIDCDPLLEI 360
            VPTLGKFSDEYRFSNAFSS FTRHSGIFY+SLKGGIE AMLREAY+G QLID DPLLEI
Sbjct: 301 PVPTLGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIENAMLREAYEGSQLIDRDPLLEI 360

Query: 361 KDKFVELLEVGWKERAEQRRQQGKQLKEDMEFVATR 397
           KDKFVELLE GW+ERAEQRRQ+ KQL++DM+F+A R
Sbjct: 361 KDKFVELLEQGWRERAEQRRQRAKQLRKDMDFMAAR 396

BLAST of Sed0001813 vs. ExPASy Swiss-Prot
Match: A0MFS5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 5.9e-47
Identity = 126/359 (35.10%), Postives = 198/359 (55.15%), Query Frame = 0

Query: 42  RKDSKLDEAIENDKRYKLCARVVREVLSEPGQVMPLRYLEKRRQRLRLNVKIQ--TFLSR 101
           RK+   D  ++ DK+ KL   + + ++S+P ++M LR L K R+ L L  + +    L +
Sbjct: 79  RKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFIALLRK 138

Query: 102 NPGLFDTYYDKIKPKSDPVLFLRSSDRLREFLEEEKRIVVDNEEVIVSKLCKLLMMSKDN 161
            PG+F+     ++  +  + F  +S+  R +L +E RI  + E+V+V KL KL+MMS D 
Sbjct: 139 YPGVFEI----VEEGAYSLRFKMTSEAERLYL-DEMRIRNELEDVLVVKLRKLVMMSIDK 198

Query: 162 FLSVDKLVHVKRDFGFPNDFLVDLVPKYPEYFQIVGSPGEGKSFLQLVSRNPNFAKSVIE 221
            + ++K+ H+K D G P +F   +  +YP+YF++V +P  G + L+L   +P  A S  E
Sbjct: 199 RILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTP-RGPA-LELTHWDPELAVSAAE 258

Query: 222 ------RRAEDESRSTGVRVRPNFN-YNLPPGFFLRKEMREWVRDWLELDYISPYEDVSH 281
                 R  E E R+  +   P FN   LP G  L K     +  + ++ YISPY+D SH
Sbjct: 259 LSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQYISPYKDFSH 318

Query: 282 LAQSSPEMEKRTVGVFHELLSLSLFKRIAVPTLGKFSDEYRFSNAFSSAFTRHSGIFYMS 341
           L   + E EK   GV HELLSL+  KR  V  L  F +E+RFS        RH  +FY+S
Sbjct: 319 LRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDLFYVS 378

Query: 342 LKGGIETAMLREAYKGDQLIDCDPLLEIKDKFVELLEVGWKER--AEQRRQQGKQLKED 390
           LKG  ++  LREAY+  +LID DPL  +K+K   L+ V    R    ++ ++G++++ D
Sbjct: 379 LKGERDSVFLREAYRNSELIDKDPLTLVKEKMRALVSVPRFPRRGGPRKDEEGREVEID 430

BLAST of Sed0001813 vs. ExPASy Swiss-Prot
Match: Q65XL5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 9.4e-45
Identity = 124/356 (34.83%), Postives = 184/356 (51.69%), Query Frame = 0

Query: 25  PEIVSQIRSISSLKVIWRKDSKLDEAIENDKRYKLCARVVREVLSEPGQVMPLRYLEKRR 84
           P    ++  ++   V  RK+   D  I+ DK+ KL  ++   ++S P +VM LR L + R
Sbjct: 47  PGAPRRLAVVAQAAVKRRKEIPFDNVIQRDKKLKLVLKLRNILVSNPDRVMSLRDLGRFR 106

Query: 85  QRLRLNVK--IQTFLSRNPGLFDTYYDKIKPKSDPVLFLRSSDRLREFLEEEKRIVVDNE 144
           + L L  K  +   L R PG+F+   + +       L  R +        +E  +  ++E
Sbjct: 107 RDLGLTRKRRLIALLKRFPGVFEVVEEGVYS-----LRFRLTPAAERLYLDELHLKNESE 166

Query: 145 EVIVSKLCKLLMMSKDNFLSVDKLVHVKRDFGFPNDFLVDLVPKYPEYFQIVG-SPGEGK 204
            + V+KL KLLMMS+D  + ++K+ H+K D G P +F   +  +YP+YF++V    G G 
Sbjct: 167 GLAVTKLRKLLMMSQDKRILIEKIAHLKNDLGLPPEFRDTICLRYPQYFRVVQMDRGPG- 226

Query: 205 SFLQLVSRNPNFAKSVI-----ERRAEDESRSTGVRVRP-NFN-YNLPPGFFLRKEMREW 264
             L+L   +P  A S       E RA +E     +  RP  FN   LP G  L +     
Sbjct: 227 --LELTHWDPELAVSAAEVAEEENRAREEQERNLIIDRPLKFNRVKLPQGLKLSRGEARR 286

Query: 265 VRDWLELDYISPYEDVSHLAQSSPEMEKRTVGVFHELLSLSLFKRIAVPTLGKFSDEYRF 324
           V  + E+ YISPY D SHL   S E EK   GV HE+LSL+L KR  V  L  F +E+RF
Sbjct: 287 VAQFKEMPYISPYSDFSHLRSGSAEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRF 346

Query: 325 SNAFSSAFTRHSGIFYMSLKGGIETAMLREAYKGDQLIDCDPLLEIKDKFVELLEV 371
           S +      RH  +FY+SLKG  ++  LREAYK  QL++   L+ +K+K   L+ V
Sbjct: 347 SQSLRGMLIRHPDMFYVSLKGDRDSVFLREAYKNSQLVEKSKLVLLKEKMRALVAV 394

BLAST of Sed0001813 vs. ExPASy Swiss-Prot
Match: B6TTV8 (Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.4e-43
Identity = 118/339 (34.81%), Postives = 181/339 (53.39%), Query Frame = 0

Query: 42  RKDSKLDEAIENDKRYKLCARVVREVLSEPGQVMPLRYLEKRRQRLRLNVK--IQTFLSR 101
           RK++  D  I+ DK+ KL  ++   ++++P +VM LR L + R+ L L  K  +   L R
Sbjct: 58  RKEAPFDTVIQRDKKLKLVLKLRNILVAQPDRVMSLRELGRFRRDLGLTRKRRLIALLRR 117

Query: 102 NPGLFDTYYDKIKPKSDPVLFLRSSDRLREFLEEEKRIVVDNEEVIVSKLCKLLMMSKDN 161
            PG+FD   + +       L  R +        +E R+  ++E + V+KL KLLMMS++ 
Sbjct: 118 FPGVFDVVEEGVYS-----LRFRLTPAAERLYLDELRLRNESEGLAVAKLRKLLMMSQEK 177

Query: 162 FLSVDKLVHVKRDFGFPNDFLVDLVPKYPEYFQIVGSPGEGKSFLQLVSRNPNFAKSVIE 221
            + ++K+ H+K D G P +F   +  +YP+YF++V    +    L+L   +P  A S  E
Sbjct: 178 RILIEKVAHLKHDLGLPPEFRDTVCLRYPQYFRVVRM--DRGPALELTHWDPELAVSAAE 237

Query: 222 RRAEDESRSTGVRVRP-------NFN-YNLPPGFFLRKEMREWVRDWLELDYISPYEDVS 281
             AE+ESR+     R         FN   LP G  L +     +  + E+ YISPY D S
Sbjct: 238 -LAEEESRAREAEERNLIIDRPLKFNRVRLPKGLKLTRGEARRIARFKEMPYISPYADFS 297

Query: 282 HLAQSSPEMEKRTVGVFHELLSLSLFKRIAVPTLGKFSDEYRFSNAFSSAFTRHSGIFYM 341
           HL   S E EK   GV HE+LSL++ KR  V  L  F +E+RFS +      RH  +FY+
Sbjct: 298 HLRSGSDEKEKHACGVVHEILSLTVEKRTLVDHLTHFREEFRFSQSLRGMIIRHPDMFYV 357

Query: 342 SLKGGIETAMLREAYKGDQLIDCDPLLEIKDKFVELLEV 371
           S KG  ++  LREAYK  QL++ + L+ +K+K   L+ V
Sbjct: 358 SFKGDRDSVFLREAYKDSQLVEKNQLVLLKEKMRALVAV 388

BLAST of Sed0001813 vs. ExPASy Swiss-Prot
Match: Q689D6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 3.6e-36
Identity = 105/375 (28.00%), Postives = 182/375 (48.53%), Query Frame = 0

Query: 43  KDSKLDEAIENDKRYKLCARVVREVLSEPGQVMPLRYLEKRRQRLRLNVKIQ---TFLSR 102
           +D   D  +E +K+ +   +    +LS+P   + +  L+   +RL L  K      FL +
Sbjct: 48  RDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARRLGLGFKQHEPGAFLLK 107

Query: 103 NPGLFDTYYDKIKPKSDPVLFLRSSDRLREFLEEEKRIVVDNEEVIVSKLCKLLMMSKDN 162
            P +F+ Y   ++     +L+ R + +  + +  E   V+D     V++L KL+MMS   
Sbjct: 108 FPHVFEIYEHPVQ----RILYCRLTRKALDQIRHEHEAVLDQIPDAVTRLRKLVMMSNTG 167

Query: 163 FLSVDKLVHVKRDFGFPNDFLVDLVPKYPEYFQIVGSPGEGKSFLQLVSRNPNFAKSVIE 222
            + ++ +   + +FG P DF   ++ K+P++F+++        ++++V ++PN +   IE
Sbjct: 168 RIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKDPNLSICAIE 227

Query: 223 RRAEDESRSTGV---RVRPNFNYNLPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQS 282
           R  E E R+ G+    VR +F  N PPGF + K  R  V  W  L Y SPYED+S     
Sbjct: 228 RVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPYEDISGYDLR 287

Query: 283 SPE----MEKRTVGVFHELLSLSLFKRIAVPTLGKFSDEYRFSNAFSSAFTRHSGIFYMS 342
           S E    +EKR+V   HELLSL++ K+I +  +  F +             +H GIFY+S
Sbjct: 288 SMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQHQGIFYIS 347

Query: 343 LKGG---IETAMLREAYKGDQLIDCDPLLEIKDKFVELLEVGWKERAEQRRQQGKQLKED 402
            +G    + T  LRE YK  +L++ + +   + +  EL+               ++ K D
Sbjct: 348 TRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELV-----------LMSPRKAKVD 407

Query: 403 MEFVATRAEYGEEND 405
            E V  R    +E+D
Sbjct: 408 AELVRYRDGLDDEDD 407

BLAST of Sed0001813 vs. ExPASy Swiss-Prot
Match: Q9ZUZ6 (Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 9.5e-29
Identity = 97/364 (26.65%), Postives = 176/364 (48.35%), Query Frame = 0

Query: 8   LFSHLRTFKSVQSSFTNPEIVSQIRSISSLKVIWRKDSKLD--EAIENDKRYKLCARVVR 67
           + S  R  K+V SS TN   ++Q R+   + + W++D   D  E I    + K    +  
Sbjct: 1   MLSIRRHAKTVASSCTN---LTQKRTYVDVYMKWKRDPYFDNIEHILRSSQLKSVVSLKN 60

Query: 68  EVLSEPGQVMPLRYLEKRRQRLRLNVKIQTFLSRNPGLFDTYYDKIKPKSDPVLFLRSSD 127
            ++ EP + +P+  + K+ ++  ++ KI  FL + P +F+ +   + P+ + + + R + 
Sbjct: 61  CIVQEPNRCIPISAISKKTRQFDVSTKIAHFLRKFPSIFEEF---VGPEYN-LPWFRLTP 120

Query: 128 RLREFLEEEKRIVVDNEEVIVSKLCKLLMMSKDNFLSVDKLVHVKRDFGFPNDFLVDLVP 187
              E   +E+ +   + + +  +L KL++MSKDN L +  +  +K   G P+D+L     
Sbjct: 121 EATELDRQERVVYQTSADDLRDRLKKLILMSKDNVLPLSIVQGMKWYLGLPDDYLQFPDM 180

Query: 188 KYPEYFQIVGSPGEGKSFLQLVSRNPNFAKSVIERRAEDESRSTGVRVRPNFNYNLPPGF 247
                F+ V    +G   L +     +   SV+++ A  + R         F      G 
Sbjct: 181 NLDSSFRFVDME-DGVKGLAVDYNGGDKVLSVLQKNAMKKRRGEVSLEEIEFPLFPSKGC 240

Query: 248 FLRKEMREWVRDWLELDYISPYEDVSHLAQSSPEMEKRTVGVFHELLSLSLFKRIAVPTL 307
            LR ++ +W+ ++ +L Y+SPY+D S L  SS   EKR VG  HELL L +        L
Sbjct: 241 RLRVKIEDWLMEFQKLPYVSPYDDYSCLDPSSDIAEKRVVGFLHELLCLFVEHSAERKKL 300

Query: 308 GKFSDEYRFSNAFSSAFTRHSGIFYMSLKGGIETAMLREAYKGDQLIDCDPLLEIKDKFV 367
                 +        AF RH  IFY+S+K    TA+LRE Y+    ++  P+L ++ K++
Sbjct: 301 LCLKKHFGLPQKVHKAFERHPQIFYLSMKNKTCTAILREPYRDKASVETHPVLGVRKKYI 356

Query: 368 ELLE 370
           +L++
Sbjct: 361 QLMK 356

BLAST of Sed0001813 vs. ExPASy TrEMBL
Match: A0A6J1JZH3 (protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111488826 PE=4 SV=1)

HSP 1 Score: 679.1 bits (1751), Expect = 1.2e-191
Identity = 334/398 (83.92%), Postives = 369/398 (92.71%), Query Frame = 0

Query: 1   MISNPQSLFSHLRTFKSVQSSFTNPEIVSQIRSISSLKVIWRKDSKLDEAIENDKRYKLC 60
           M+S P +LFS+LR+FKS QSSF   +   QIR++SSLKVIWRKDS+LDEAIENDKRYKLC
Sbjct: 1   MLSTPYALFSYLRSFKSAQSSFVRRKFFLQIRAVSSLKVIWRKDSRLDEAIENDKRYKLC 60

Query: 61  ARVVREVLSEPGQVMPLRYLEKRRQRLRLNVKIQTFLSRNPGLFDTYYDKIKPKSDPVLF 120
           ARVVREVL+EPGQV+PLRYLEKRRQRLRLNV I+TF+S NPGL +TY D+IKPKS+PVLF
Sbjct: 61  ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPGLLNTYCDRIKPKSEPVLF 120

Query: 121 LRSSDRLREFLEEEKRIVVDNEEVIVSKLCKLLMMSKDNFLSVDKLVHVKRDFGFPNDFL 180
           LR SDRLR FLEEEKRI ++NE ++VSKLCKLLM+SKD  LSVDKLVHVKR+FGFPNDFL
Sbjct: 121 LRPSDRLRGFLEEEKRITMENEALLVSKLCKLLMISKDKLLSVDKLVHVKREFGFPNDFL 180

Query: 181 VDLVPKYPEYFQIVGSPGEGKSFLQLVSRNPNFAKSVIERRAEDESRSTGVRVRPNFNYN 240
           V+LVPKYPEYFQI+GSPG+ KSFLQLVSRNPNFAKSVIERRAEDES STG+++RPNFNYN
Sbjct: 181 VNLVPKYPEYFQIIGSPGDEKSFLQLVSRNPNFAKSVIERRAEDESISTGIQIRPNFNYN 240

Query: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQSSPEMEKRTVGVFHELLSLSLFKRI 300
           LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQ+SPEMEKRTVG+FHELLSLSLFKRI
Sbjct: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTVGIFHELLSLSLFKRI 300

Query: 301 AVPTLGKFSDEYRFSNAFSSAFTRHSGIFYMSLKGGIETAMLREAYKGDQLIDCDPLLEI 360
            VP LGKFSDEYRFSNAFSS FTRHSGIFY+SLKGGIETAMLREAYKG QLIDCDPLLEI
Sbjct: 301 PVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLLEI 360

Query: 361 KDKFVELLEVGWKERAEQRRQQGKQLKEDMEFVATRAE 399
           KDKFVELLE GW+ERAEQRRQQ KQ++ DMEF+A RA+
Sbjct: 361 KDKFVELLEEGWRERAEQRRQQAKQVRNDMEFMAARAD 398

BLAST of Sed0001813 vs. ExPASy TrEMBL
Match: A0A6J1GN70 (protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111456044 PE=4 SV=1)

HSP 1 Score: 678.3 bits (1749), Expect = 2.0e-191
Identity = 336/398 (84.42%), Postives = 368/398 (92.46%), Query Frame = 0

Query: 1   MISNPQSLFSHLRTFKSVQSSFTNPEIVSQIRSISSLKVIWRKDSKLDEAIENDKRYKLC 60
           M+S P +LFS+LR+FKS QS F   + V QIRS+SSLKVIWRKDS+LDEAIENDKRYKLC
Sbjct: 1   MLSTPYALFSYLRSFKSAQSCFVRRKFVLQIRSVSSLKVIWRKDSRLDEAIENDKRYKLC 60

Query: 61  ARVVREVLSEPGQVMPLRYLEKRRQRLRLNVKIQTFLSRNPGLFDTYYDKIKPKSDPVLF 120
           ARVVREVL+EPGQV+PLRYLEKRRQRLRLNV I+TF+S NPGL +TYYD+IKPKS+PVLF
Sbjct: 61  ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPGLLNTYYDRIKPKSEPVLF 120

Query: 121 LRSSDRLREFLEEEKRIVVDNEEVIVSKLCKLLMMSKDNFLSVDKLVHVKRDFGFPNDFL 180
           LR SDRLR FLEEEKRI ++NE +IVSKLCKLLM+SKD  LSVDKLV VKR+FGFPNDFL
Sbjct: 121 LRPSDRLRGFLEEEKRITMENEALIVSKLCKLLMISKDKVLSVDKLVQVKREFGFPNDFL 180

Query: 181 VDLVPKYPEYFQIVGSPGEGKSFLQLVSRNPNFAKSVIERRAEDESRSTGVRVRPNFNYN 240
           V+LVPKYPEYFQI+GSPG+ KSFLQLVSRNP+FAKSVIERRAEDES STG+ +RPNFNYN
Sbjct: 181 VNLVPKYPEYFQIIGSPGDEKSFLQLVSRNPDFAKSVIERRAEDESISTGIDIRPNFNYN 240

Query: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQSSPEMEKRTVGVFHELLSLSLFKRI 300
           LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQ+SPEMEKRTVGVFHELLSLSLFKRI
Sbjct: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTVGVFHELLSLSLFKRI 300

Query: 301 AVPTLGKFSDEYRFSNAFSSAFTRHSGIFYMSLKGGIETAMLREAYKGDQLIDCDPLLEI 360
            VP LGKFSDEYRFSNAFSS FTRHSGIFY+SLKGGIETAMLREAYKG QLIDCDPLLEI
Sbjct: 301 PVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLLEI 360

Query: 361 KDKFVELLEVGWKERAEQRRQQGKQLKEDMEFVATRAE 399
           KDKFVELLE GW+ERAEQRRQQ KQ++ DMEF+A RA+
Sbjct: 361 KDKFVELLEEGWRERAEQRRQQAKQVRNDMEFMAARAD 398

BLAST of Sed0001813 vs. ExPASy TrEMBL
Match: A0A6J1D830 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Momordica charantia OX=3673 GN=LOC111018487 PE=4 SV=1)

HSP 1 Score: 666.0 bits (1717), Expect = 1.0e-187
Identity = 330/397 (83.12%), Postives = 365/397 (91.94%), Query Frame = 0

Query: 1   MISNPQSLFSHLRTFKSVQSSFTNPEIVSQIRSISSLKVIWRKDSKLDEAIENDKRYKLC 60
           M+  P++LFS+LR+F+S QSS  +PEI+ QIRSISSLKV+WRKD +LDEAIE+DKRYKLC
Sbjct: 1   MLFTPRTLFSYLRSFRSAQSSSISPEIIFQIRSISSLKVVWRKDPRLDEAIESDKRYKLC 60

Query: 61  ARVVREVLSEPGQVMPLRYLEKRRQRLRLNVKIQTFLSRNPGLFDTYYDKIKPKSDPVLF 120
           ARVVREVL+EPGQV+PLRYLEKRR RLRLNVKI+TF++RNPGLFDTYYD+IKPKS+PVLF
Sbjct: 61  ARVVREVLNEPGQVIPLRYLEKRRPRLRLNVKIETFMNRNPGLFDTYYDRIKPKSEPVLF 120

Query: 121 LRSSDRLREFLEEEKRIVVDNEEVIVSKLCKLLMMSKDNFLSVDKLVHVKRDFGFPNDFL 180
           +R+SDRLREFL EE+RI  +NE +IVSKLCKLLM+SKD  LSVDKLVHVKR+FGFPNDFL
Sbjct: 121 IRASDRLREFLXEEERITTENEALIVSKLCKLLMISKDKVLSVDKLVHVKREFGFPNDFL 180

Query: 181 VDLVPKYPEYFQIVGSPGEGKSFLQLVSRNPNFAKSVIERRAEDESRSTGVRVRPNFNYN 240
           V+LVPKYPEYFQ+VGSPGEGKSFLQLVSRNPNF+KSVIE RA+DESR TG+RVRPNF+Y 
Sbjct: 181 VNLVPKYPEYFQLVGSPGEGKSFLQLVSRNPNFSKSVIETRADDESRLTGIRVRPNFDYK 240

Query: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQSSPEMEKRTVGVFHELLSLSLFKRI 300
           LPPGF LRKEMREWVRDWLELDYISPYEDV+HLAQ+SPEMEKRTV VFHELLSLSL KRI
Sbjct: 241 LPPGFILRKEMREWVRDWLELDYISPYEDVTHLAQASPEMEKRTVAVFHELLSLSLHKRI 300

Query: 301 AVPTLGKFSDEYRFSNAFSSAFTRHSGIFYMSLKGGIETAMLREAYKGDQLIDCDPLLEI 360
            VP LGKFSDEYRFSNAFSS FTRHSGIFYMSLKGGI T MLREAYKGDQLID DPLLEI
Sbjct: 301 PVPILGKFSDEYRFSNAFSSIFTRHSGIFYMSLKGGIGTGMLREAYKGDQLIDRDPLLEI 360

Query: 361 KDKFVELLEVGWKERAEQRRQQGKQLKEDMEFVATRA 398
           KDKFVELLE GW+ERAE RRQQ KQLK DME +A RA
Sbjct: 361 KDKFVELLEEGWRERAEWRRQQTKQLKMDMELMAARA 397

BLAST of Sed0001813 vs. ExPASy TrEMBL
Match: A0A5D3DBW6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold328G00130 PE=4 SV=1)

HSP 1 Score: 661.4 bits (1705), Expect = 2.6e-186
Identity = 325/397 (81.86%), Postives = 360/397 (90.68%), Query Frame = 0

Query: 1   MISNPQSLFSHLRTFKSVQSSFTNPEIVSQIRSISSLKVIWRKDSKLDEAIENDKRYKLC 60
           M S P SL S+LR  KS   SF + EI+ Q R ISSLKV+WRKD +LDEAIENDKRYKLC
Sbjct: 1   MFSTPHSLISYLRRIKSPHPSFLSQEIIVQFRPISSLKVVWRKDYRLDEAIENDKRYKLC 60

Query: 61  ARVVREVLSEPGQVMPLRYLEKRRQRLRLNVKIQTFLSRNPGLFDTYYDKIKPKSDPVLF 120
           ARVVREVL+EPGQV+PLRYLEKRR+RLRLNV ++ FL  NPGL DTYYD+IKPKS+PVLF
Sbjct: 61  ARVVREVLNEPGQVIPLRYLEKRRERLRLNVSVKAFLGFNPGLLDTYYDRIKPKSEPVLF 120

Query: 121 LRSSDRLREFLEEEKRIVVDNEEVIVSKLCKLLMMSKDNFLSVDKLVHVKRDFGFPNDFL 180
           LR+SDRLR FLEEEKRI+++NEE+IVSKLCKLLMMSKD  LSVDKL+HVKRDFGFPNDFL
Sbjct: 121 LRASDRLRRFLEEEKRIMMENEELIVSKLCKLLMMSKDKMLSVDKLLHVKRDFGFPNDFL 180

Query: 181 VDLVPKYPEYFQIVGSPGEGKSFLQLVSRNPNFAKSVIERRAEDESRSTGVRVRPNFNYN 240
           V+LVPKYPEYFQIVGSPGEGKSFLQLV+RNP+FAKSVIERRAEDESRSTG+R+RPNF+Y 
Sbjct: 181 VNLVPKYPEYFQIVGSPGEGKSFLQLVTRNPDFAKSVIERRAEDESRSTGIRMRPNFDYK 240

Query: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQSSPEMEKRTVGVFHELLSLSLFKRI 300
           LPPGF LRKEMREWVRDWLELDY+SPYEDVS+L QSSPEMEKRTVGVFHELLSLSL KRI
Sbjct: 241 LPPGFILRKEMREWVRDWLELDYLSPYEDVSYLEQSSPEMEKRTVGVFHELLSLSLLKRI 300

Query: 301 AVPTLGKFSDEYRFSNAFSSAFTRHSGIFYMSLKGGIETAMLREAYKGDQLIDCDPLLEI 360
            VP LGKF DEYRFSNAFSS FTRHSGIFY+SLKGGIETAMLREAY+GDQLIDCDPLLEI
Sbjct: 301 PVPILGKFGDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYQGDQLIDCDPLLEI 360

Query: 361 KDKFVELLEVGWKERAEQRRQQGKQLKEDMEFVATRA 398
           K+KFVELLE GW+ERAEQRR+Q  + ++DMEF+  RA
Sbjct: 361 KNKFVELLEQGWRERAEQRREQANERRKDMEFMGARA 397

BLAST of Sed0001813 vs. ExPASy TrEMBL
Match: A0A1S3BS57 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103492691 PE=4 SV=1)

HSP 1 Score: 661.4 bits (1705), Expect = 2.6e-186
Identity = 326/397 (82.12%), Postives = 360/397 (90.68%), Query Frame = 0

Query: 1   MISNPQSLFSHLRTFKSVQSSFTNPEIVSQIRSISSLKVIWRKDSKLDEAIENDKRYKLC 60
           M S P SL S+LR  KS   SF + EI+ Q R ISSLKV+WRKD +LDEAIENDKRYKLC
Sbjct: 1   MFSTPHSLISYLRRIKSPHPSFLSQEIIVQFRPISSLKVVWRKDYRLDEAIENDKRYKLC 60

Query: 61  ARVVREVLSEPGQVMPLRYLEKRRQRLRLNVKIQTFLSRNPGLFDTYYDKIKPKSDPVLF 120
           ARVVREVL+EPGQV+PLRYLEKRR+RLRLNV ++ FL  NPGL DTYYD+IKPKS+PVLF
Sbjct: 61  ARVVREVLNEPGQVIPLRYLEKRRERLRLNVSVKAFLGFNPGLLDTYYDRIKPKSEPVLF 120

Query: 121 LRSSDRLREFLEEEKRIVVDNEEVIVSKLCKLLMMSKDNFLSVDKLVHVKRDFGFPNDFL 180
           LR+SDRLR FLEEEKRI+++NEE+IVSKLCKLLMMSKD  LSVDKL+HVKRDFGFPNDFL
Sbjct: 121 LRASDRLRGFLEEEKRIMMENEELIVSKLCKLLMMSKDKMLSVDKLLHVKRDFGFPNDFL 180

Query: 181 VDLVPKYPEYFQIVGSPGEGKSFLQLVSRNPNFAKSVIERRAEDESRSTGVRVRPNFNYN 240
           V+LVPKYPEYFQIVGSPGEGKSFLQLV+RNP+FAKSVIERRAEDESRSTG+R+RPNF+Y 
Sbjct: 181 VNLVPKYPEYFQIVGSPGEGKSFLQLVTRNPDFAKSVIERRAEDESRSTGIRMRPNFDYK 240

Query: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQSSPEMEKRTVGVFHELLSLSLFKRI 300
           LPPGF LRKEMREWVRDWLELDYISPYEDVS+L QSSPEMEKRTVGVFHELLSLSL KRI
Sbjct: 241 LPPGFILRKEMREWVRDWLELDYISPYEDVSYLEQSSPEMEKRTVGVFHELLSLSLLKRI 300

Query: 301 AVPTLGKFSDEYRFSNAFSSAFTRHSGIFYMSLKGGIETAMLREAYKGDQLIDCDPLLEI 360
            VP LGKF DEYRFSNAFSS FTRHSGIFY+SLKGGIETAMLREAY+GDQLIDCDPLLEI
Sbjct: 301 PVPILGKFGDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYQGDQLIDCDPLLEI 360

Query: 361 KDKFVELLEVGWKERAEQRRQQGKQLKEDMEFVATRA 398
           K+KFVELLE GW+ERAEQRR+Q  + ++DMEF+  RA
Sbjct: 361 KNKFVELLEQGWRERAEQRREQANERRKDMEFMGARA 397

BLAST of Sed0001813 vs. TAIR 10
Match: AT3G63090.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 540.0 bits (1390), Expect = 1.7e-153
Identity = 263/364 (72.25%), Postives = 311/364 (85.44%), Query Frame = 0

Query: 30  QIRSISSLKVIWRKDSKLDEAIENDKRYKLCARVVREVLSEPGQVMPLRYLEKRRQRLRL 89
           QIR ISSLKV+W+KD++LDEAIE DKRYKLCARVV+EVL+EPGQV+PLRYLEKRR+RLRL
Sbjct: 27  QIRWISSLKVVWKKDTRLDEAIEQDKRYKLCARVVKEVLNEPGQVIPLRYLEKRRERLRL 86

Query: 90  NVKIQTFLSRNPGLFDTYYDKIKPKSDPVLFLRSSDRLREFLEEEKRIVVDNEEVIVSKL 149
             K ++F+  NP LF+ YYD+IKPKSDPV FLR + RLR FL+EE+RI  +NE ++VSKL
Sbjct: 87  TFKAKSFVEMNPSLFEIYYDRIKPKSDPVQFLRPTPRLRAFLDEEQRIYSENEPLLVSKL 146

Query: 150 CKLLMMSKDNFLSVDKLVHVKRDFGFPNDFLVDLVPKYPEYFQIVGSPGEGKSFLQLVSR 209
           C+LLMM+KD  +S DKLVHVKRDFGFPNDFL+ LV KYP YF++ G P EGKSFL+LVS 
Sbjct: 147 CQLLMMAKDKVISADKLVHVKRDFGFPNDFLMKLVQKYPNYFRLTGLPEEGKSFLELVSW 206

Query: 210 NPNFAKSVIERRAEDESRSTGVRVRPNFNYNLPPGFFLRKEMREWVRDWLELDYISPYED 269
           NP+FAKS IE RAEDE+  TGVR+RPN+N  LP GFFLRKEMREW RDWLE DYISPYED
Sbjct: 207 NPDFAKSKIELRAEDETLKTGVRIRPNYNVKLPSGFFLRKEMREWTRDWLEQDYISPYED 266

Query: 270 VSHLAQSSPEMEKRTVGVFHELLSLSLFKRIAVPTLGKFSDEYRFSNAFSSAFTRHSGIF 329
           VSHL Q+S EMEKRTVGV HELLSLSL KR+ VPTLGKF DE+RFSNAFSS FTRHSGIF
Sbjct: 267 VSHLDQASKEMEKRTVGVVHELLSLSLLKRVPVPTLGKFCDEFRFSNAFSSVFTRHSGIF 326

Query: 330 YMSLKGGIETAMLREAYKGDQLIDCDPLLEIKDKFVELLEVGWKERAEQRRQQGKQLKED 389
           Y+SLKGGI+TA+LREAYK D+L+D DPLL IKDKF+ LLE GW+ER ++ + Q +Q+++D
Sbjct: 327 YLSLKGGIKTAVLREAYKDDELVDRDPLLAIKDKFLRLLEEGWQERKDRLKLQREQVQKD 386

Query: 390 MEFV 394
            E +
Sbjct: 387 REMM 390

BLAST of Sed0001813 vs. TAIR 10
Match: AT2G31290.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 190.3 bits (482), Expect = 3.2e-48
Identity = 115/341 (33.72%), Postives = 186/341 (54.55%), Query Frame = 0

Query: 42  RKDSKLDEAIENDKRYKLCARVVREVLSEPGQVMPLRYLEKRRQRLRLNVKIQTFLSRNP 101
           +KD  L+ A+  +KR+ + +R+   +L  P QV  +++L+K+ + L L  K   +L + P
Sbjct: 29  KKDPDLESALSRNKRWIVNSRLKNIILRCPNQVASIKFLQKKFKTLDLQGKALNWLKKYP 88

Query: 102 GLFDTYYDKIKPKSDPVLFLRSSDRLREFLEEEKRIVVDNEEVIVSKLCKLLMMSKDNFL 161
             F  Y +      +   + R +  +   +EEE+ +    E V+  +L KLLM+S +  L
Sbjct: 89  CCFHVYLE------NDEYYCRLTKPMMTLVEEEELVKDTQEPVLADRLAKLLMLSVNQRL 148

Query: 162 SVDKLVHVKRDFGFPNDFLVDLVPKYPEYFQIVGSPGEGKSF-LQLVSRNPNFAKSVIER 221
           +V KL   KR FGFP+D+++ +VPKY + F++V   G   S  ++L+   P  A S +E 
Sbjct: 149 NVVKLNEFKRSFGFPDDYVIRIVPKYSDVFRLVNYSGRKSSMEIELLLWKPELAVSAVEA 208

Query: 222 RAEDESRSTGVRVRPNFNYNLPPGFFLRKEMREWVR--DWLELDYISPYEDVSHLAQSSP 281
            A+           P+F+ +LP  +      + W R  ++    YISPYED   L + S 
Sbjct: 209 AAKK------CGSEPSFSCSLPSTW-----TKPWERFMEFNAFPYISPYEDHGDLVEGSK 268

Query: 282 EMEKRTVGVFHELLSLSLFKRIAVPTLGKFSDEYRFSNAFSSAFTRHSGIFYMSLKGGIE 341
           E EKR+VG+ HELLSL+L+K++++  L  F  E+      +    +H GIFY+  K  + 
Sbjct: 269 ESEKRSVGLVHELLSLTLWKKLSIVKLSHFKREFGLPEKLNGMLLKHPGIFYVGNKYQVH 328

Query: 342 TAMLREAYKGDQLIDCDPLLEIKDKFVELLEVGWKERAEQR 380
           T +LRE Y G +LI  DPL+ +KDKF EL++ G  E   +R
Sbjct: 329 TVILREGYNGSELIHKDPLVVVKDKFGELMQQGLYEYNHRR 352

BLAST of Sed0001813 vs. TAIR 10
Match: AT2G31290.2 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 190.3 bits (482), Expect = 3.2e-48
Identity = 115/341 (33.72%), Postives = 186/341 (54.55%), Query Frame = 0

Query: 42  RKDSKLDEAIENDKRYKLCARVVREVLSEPGQVMPLRYLEKRRQRLRLNVKIQTFLSRNP 101
           +KD  L+ A+  +KR+ + +R+   +L  P QV  +++L+K+ + L L  K   +L + P
Sbjct: 29  KKDPDLESALSRNKRWIVNSRLKNIILRCPNQVASIKFLQKKFKTLDLQGKALNWLKKYP 88

Query: 102 GLFDTYYDKIKPKSDPVLFLRSSDRLREFLEEEKRIVVDNEEVIVSKLCKLLMMSKDNFL 161
             F  Y +      +   + R +  +   +EEE+ +    E V+  +L KLLM+S +  L
Sbjct: 89  CCFHVYLE------NDEYYCRLTKPMMTLVEEEELVKDTQEPVLADRLAKLLMLSVNQRL 148

Query: 162 SVDKLVHVKRDFGFPNDFLVDLVPKYPEYFQIVGSPGEGKSF-LQLVSRNPNFAKSVIER 221
           +V KL   KR FGFP+D+++ +VPKY + F++V   G   S  ++L+   P  A S +E 
Sbjct: 149 NVVKLNEFKRSFGFPDDYVIRIVPKYSDVFRLVNYSGRKSSMEIELLLWKPELAVSAVEA 208

Query: 222 RAEDESRSTGVRVRPNFNYNLPPGFFLRKEMREWVR--DWLELDYISPYEDVSHLAQSSP 281
            A+           P+F+ +LP  +      + W R  ++    YISPYED   L + S 
Sbjct: 209 AAKK------CGSEPSFSCSLPSTW-----TKPWERFMEFNAFPYISPYEDHGDLVEGSK 268

Query: 282 EMEKRTVGVFHELLSLSLFKRIAVPTLGKFSDEYRFSNAFSSAFTRHSGIFYMSLKGGIE 341
           E EKR+VG+ HELLSL+L+K++++  L  F  E+      +    +H GIFY+  K  + 
Sbjct: 269 ESEKRSVGLVHELLSLTLWKKLSIVKLSHFKREFGLPEKLNGMLLKHPGIFYVGNKYQVH 328

Query: 342 TAMLREAYKGDQLIDCDPLLEIKDKFVELLEVGWKERAEQR 380
           T +LRE Y G +LI  DPL+ +KDKF EL++ G  E   +R
Sbjct: 329 TVILREGYNGSELIHKDPLVVVKDKFGELMQQGLYEYNHRR 352

BLAST of Sed0001813 vs. TAIR 10
Match: AT4G01037.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 189.9 bits (481), Expect = 4.2e-48
Identity = 126/359 (35.10%), Postives = 198/359 (55.15%), Query Frame = 0

Query: 42  RKDSKLDEAIENDKRYKLCARVVREVLSEPGQVMPLRYLEKRRQRLRLNVKIQ--TFLSR 101
           RK+   D  ++ DK+ KL   + + ++S+P ++M LR L K R+ L L  + +    L +
Sbjct: 79  RKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFIALLRK 138

Query: 102 NPGLFDTYYDKIKPKSDPVLFLRSSDRLREFLEEEKRIVVDNEEVIVSKLCKLLMMSKDN 161
            PG+F+     ++  +  + F  +S+  R +L +E RI  + E+V+V KL KL+MMS D 
Sbjct: 139 YPGVFEI----VEEGAYSLRFKMTSEAERLYL-DEMRIRNELEDVLVVKLRKLVMMSIDK 198

Query: 162 FLSVDKLVHVKRDFGFPNDFLVDLVPKYPEYFQIVGSPGEGKSFLQLVSRNPNFAKSVIE 221
            + ++K+ H+K D G P +F   +  +YP+YF++V +P  G + L+L   +P  A S  E
Sbjct: 199 RILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTP-RGPA-LELTHWDPELAVSAAE 258

Query: 222 ------RRAEDESRSTGVRVRPNFN-YNLPPGFFLRKEMREWVRDWLELDYISPYEDVSH 281
                 R  E E R+  +   P FN   LP G  L K     +  + ++ YISPY+D SH
Sbjct: 259 LSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQYISPYKDFSH 318

Query: 282 LAQSSPEMEKRTVGVFHELLSLSLFKRIAVPTLGKFSDEYRFSNAFSSAFTRHSGIFYMS 341
           L   + E EK   GV HELLSL+  KR  V  L  F +E+RFS        RH  +FY+S
Sbjct: 319 LRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDLFYVS 378

Query: 342 LKGGIETAMLREAYKGDQLIDCDPLLEIKDKFVELLEVGWKER--AEQRRQQGKQLKED 390
           LKG  ++  LREAY+  +LID DPL  +K+K   L+ V    R    ++ ++G++++ D
Sbjct: 379 LKGERDSVFLREAYRNSELIDKDPLTLVKEKMRALVSVPRFPRRGGPRKDEEGREVEID 430

BLAST of Sed0001813 vs. TAIR 10
Match: AT4G24320.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 171.0 bits (432), Expect = 2.0e-42
Identity = 111/350 (31.71%), Postives = 172/350 (49.14%), Query Frame = 0

Query: 28  VSQIRSISSLKVIWRKDSKLDEAIENDKRYKLCARVVREVLSEPGQVMPLRYLEKRRQRL 87
           + Q R+  + +V W  D  LDEA++ +K  K    +   ++S P + +PL  L   +  +
Sbjct: 12  LQQRRTFVNARVKWVSDHYLDEAVQREKNLKQVISLKDRIVSSPSKSLPLSSLSLLKPLV 71

Query: 88  RLNVKIQTFLSRNPGLFDTYYDKIKPKSDPVLFLRSSDRLREFLEEEKRIVVD--NEEVI 147
            L++    F  + P +F T+    +P     L +R + +     +EE+ I +      V 
Sbjct: 72  NLHITAAAFFQKYPSVFTTF----QPSPSHPLHVRLTPQALTLHKEEETIHLSPPQRNVT 131

Query: 148 VSKLCKLLMMSKDNFLSVDKLVHVKRDFGFPNDFLVDLVPKYPEYFQIV----GSPGEGK 207
           V +L K LM++    L +  L   + D G P D++  L+  YPEYF++        GE  
Sbjct: 132 VQRLTKFLMLTGAGSLPLYVLDRFRFDLGLPRDYITSLIGDYPEYFEVTEIKDRLTGEKT 191

Query: 208 SFLQLVSRNPNFAKSVIERRAE--DESR-STGVRVRPNFNYNLPPGFFLRKEMREWVRDW 267
             L + SR  N   S +ERR    D SR   G+R+R  ++ N P G+ L K ++ WV  W
Sbjct: 192 LALTISSRRNNLPVSEMERREATIDGSRVKKGLRIR--YSMNFPKGYELHKRVKNWVEQW 251

Query: 268 LELDYISPYEDVSHLAQSSPEMEKRTVGVFHELLSLSLFKRIAVPTLGKFSDEYRFSNAF 327
             L YISPYE+  HL   S + EK  V V HELL L + K+     +    +   F   F
Sbjct: 252 QNLPYISPYENAFHLGSYSDQAEKWAVAVLHELLFLLVSKKTETDNVICLGEYLGFGMRF 311

Query: 328 SSAFTRHSGIFYMSLKGGIETAMLREAYKGDQLIDCDPLLEIKDKFVELL 369
             A   H GIFYMS K   +T +LREAY    L++  PL+ I+ +++ L+
Sbjct: 312 KKALVHHPGIFYMSHKIRTQTVVLREAYHKVFLLEKHPLMGIRHQYIYLM 355

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7014426.12.4e-19184.42Protein ROOT PRIMORDIUM DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argy... [more]
XP_022992526.12.4e-19183.92protein WHAT'S THIS FACTOR 1 homolog [Cucurbita maxima] >XP_022992527.1 protein ... [more]
XP_022953521.14.2e-19184.42protein WHAT'S THIS FACTOR 1 homolog [Cucurbita moschata] >XP_022953522.1 protei... [more]
KAG6575893.17.1e-19184.17Protein WHAT'S THIS FACTOR 1-like, chloroplastic, partial [Cucurbita argyrosperm... [more]
XP_038899043.18.7e-18984.34protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Benincasa hispida][more]
Match NameE-valueIdentityDescription
A0MFS55.9e-4735.10Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3... [more]
Q65XL59.4e-4534.83Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japon... [more]
B6TTV81.4e-4334.81Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=... [more]
Q689D63.6e-3628.00Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1... [more]
Q9ZUZ69.5e-2926.65Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=W... [more]
Match NameE-valueIdentityDescription
A0A6J1JZH31.2e-19183.92protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111488826... [more]
A0A6J1GN702.0e-19184.42protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC1114560... [more]
A0A6J1D8301.0e-18783.12protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Momordica charantia OX=3673 GN=LOC1110184... [more]
A0A5D3DBW62.6e-18681.86Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A1S3BS572.6e-18682.12protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103492691 PE=4... [more]
Match NameE-valueIdentityDescription
AT3G63090.11.7e-15372.25Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT2G31290.13.2e-4833.72Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT2G31290.23.2e-4833.72Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT4G01037.14.2e-4835.10Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT4G24320.12.0e-4231.71Ubiquitin carboxyl-terminal hydrolase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021099Plant organelle RNA recognition domainPFAMPF11955PORRcoord: 43..371
e-value: 1.3E-105
score: 353.0
NoneNo IPR availablePANTHERPTHR31476:SF3UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEINcoord: 25..398
IPR045040PORR familyPANTHERPTHR31476PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTICcoord: 25..398

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0001813.1Sed0001813.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0003723 RNA binding