Homology
BLAST of Sed0001813 vs. NCBI nr
Match:
KAG7014426.1 (Protein ROOT PRIMORDIUM DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 679.1 bits (1751), Expect = 2.4e-191
Identity = 336/398 (84.42%), Postives = 368/398 (92.46%), Query Frame = 0
Query: 1 MISNPQSLFSHLRTFKSVQSSFTNPEIVSQIRSISSLKVIWRKDSKLDEAIENDKRYKLC 60
M+S P +LFS+LR+FKS QS F + V QIR++SSLKVIWRKDS+LDEAIENDKRYKLC
Sbjct: 1 MLSKPYALFSYLRSFKSAQSCFVRRKFVLQIRAVSSLKVIWRKDSRLDEAIENDKRYKLC 60
Query: 61 ARVVREVLSEPGQVMPLRYLEKRRQRLRLNVKIQTFLSRNPGLFDTYYDKIKPKSDPVLF 120
ARVVREVL+EPGQV+PLRYLEKRRQRLRLNV I+TF+S NPGL DTYYD+IKPKS+PVLF
Sbjct: 61 ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPGLLDTYYDRIKPKSEPVLF 120
Query: 121 LRSSDRLREFLEEEKRIVVDNEEVIVSKLCKLLMMSKDNFLSVDKLVHVKRDFGFPNDFL 180
LR SDRLR FLEEEKRI ++NE +IVSKLCKLLM+SKD LSVDKLV VKR+FGFPNDFL
Sbjct: 121 LRPSDRLRGFLEEEKRITMENEALIVSKLCKLLMISKDKVLSVDKLVQVKREFGFPNDFL 180
Query: 181 VDLVPKYPEYFQIVGSPGEGKSFLQLVSRNPNFAKSVIERRAEDESRSTGVRVRPNFNYN 240
V+LVPKYPEYFQI+GSPG+ KSFLQLVSRNP+FAKSVIERRAEDES STG+ +RPNFNYN
Sbjct: 181 VNLVPKYPEYFQIIGSPGDEKSFLQLVSRNPDFAKSVIERRAEDESISTGIDIRPNFNYN 240
Query: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQSSPEMEKRTVGVFHELLSLSLFKRI 300
LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQ+SPEMEKRTVGVFHELLSLSLFKRI
Sbjct: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTVGVFHELLSLSLFKRI 300
Query: 301 AVPTLGKFSDEYRFSNAFSSAFTRHSGIFYMSLKGGIETAMLREAYKGDQLIDCDPLLEI 360
VP LGKFSDEYRFSNAFSS FTRHSGIFY+SLKGGIETAMLREAYKG QLIDCDPLLEI
Sbjct: 301 PVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLLEI 360
Query: 361 KDKFVELLEVGWKERAEQRRQQGKQLKEDMEFVATRAE 399
KDKFVELLE GW+ERAEQRRQQ KQ++ DMEF+A RA+
Sbjct: 361 KDKFVELLEEGWRERAEQRRQQAKQVRNDMEFMAARAD 398
BLAST of Sed0001813 vs. NCBI nr
Match:
XP_022992526.1 (protein WHAT'S THIS FACTOR 1 homolog [Cucurbita maxima] >XP_022992527.1 protein WHAT'S THIS FACTOR 1 homolog [Cucurbita maxima] >XP_022992528.1 protein WHAT'S THIS FACTOR 1 homolog [Cucurbita maxima] >XP_022992529.1 protein WHAT'S THIS FACTOR 1 homolog [Cucurbita maxima] >XP_022992530.1 protein WHAT'S THIS FACTOR 1 homolog [Cucurbita maxima] >XP_022992531.1 protein WHAT'S THIS FACTOR 1 homolog [Cucurbita maxima])
HSP 1 Score: 679.1 bits (1751), Expect = 2.4e-191
Identity = 334/398 (83.92%), Postives = 369/398 (92.71%), Query Frame = 0
Query: 1 MISNPQSLFSHLRTFKSVQSSFTNPEIVSQIRSISSLKVIWRKDSKLDEAIENDKRYKLC 60
M+S P +LFS+LR+FKS QSSF + QIR++SSLKVIWRKDS+LDEAIENDKRYKLC
Sbjct: 1 MLSTPYALFSYLRSFKSAQSSFVRRKFFLQIRAVSSLKVIWRKDSRLDEAIENDKRYKLC 60
Query: 61 ARVVREVLSEPGQVMPLRYLEKRRQRLRLNVKIQTFLSRNPGLFDTYYDKIKPKSDPVLF 120
ARVVREVL+EPGQV+PLRYLEKRRQRLRLNV I+TF+S NPGL +TY D+IKPKS+PVLF
Sbjct: 61 ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPGLLNTYCDRIKPKSEPVLF 120
Query: 121 LRSSDRLREFLEEEKRIVVDNEEVIVSKLCKLLMMSKDNFLSVDKLVHVKRDFGFPNDFL 180
LR SDRLR FLEEEKRI ++NE ++VSKLCKLLM+SKD LSVDKLVHVKR+FGFPNDFL
Sbjct: 121 LRPSDRLRGFLEEEKRITMENEALLVSKLCKLLMISKDKLLSVDKLVHVKREFGFPNDFL 180
Query: 181 VDLVPKYPEYFQIVGSPGEGKSFLQLVSRNPNFAKSVIERRAEDESRSTGVRVRPNFNYN 240
V+LVPKYPEYFQI+GSPG+ KSFLQLVSRNPNFAKSVIERRAEDES STG+++RPNFNYN
Sbjct: 181 VNLVPKYPEYFQIIGSPGDEKSFLQLVSRNPNFAKSVIERRAEDESISTGIQIRPNFNYN 240
Query: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQSSPEMEKRTVGVFHELLSLSLFKRI 300
LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQ+SPEMEKRTVG+FHELLSLSLFKRI
Sbjct: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTVGIFHELLSLSLFKRI 300
Query: 301 AVPTLGKFSDEYRFSNAFSSAFTRHSGIFYMSLKGGIETAMLREAYKGDQLIDCDPLLEI 360
VP LGKFSDEYRFSNAFSS FTRHSGIFY+SLKGGIETAMLREAYKG QLIDCDPLLEI
Sbjct: 301 PVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLLEI 360
Query: 361 KDKFVELLEVGWKERAEQRRQQGKQLKEDMEFVATRAE 399
KDKFVELLE GW+ERAEQRRQQ KQ++ DMEF+A RA+
Sbjct: 361 KDKFVELLEEGWRERAEQRRQQAKQVRNDMEFMAARAD 398
BLAST of Sed0001813 vs. NCBI nr
Match:
XP_022953521.1 (protein WHAT'S THIS FACTOR 1 homolog [Cucurbita moschata] >XP_022953522.1 protein WHAT'S THIS FACTOR 1 homolog [Cucurbita moschata] >XP_022953524.1 protein WHAT'S THIS FACTOR 1 homolog [Cucurbita moschata] >XP_022953525.1 protein WHAT'S THIS FACTOR 1 homolog [Cucurbita moschata] >XP_022953526.1 protein WHAT'S THIS FACTOR 1 homolog [Cucurbita moschata])
HSP 1 Score: 678.3 bits (1749), Expect = 4.2e-191
Identity = 336/398 (84.42%), Postives = 368/398 (92.46%), Query Frame = 0
Query: 1 MISNPQSLFSHLRTFKSVQSSFTNPEIVSQIRSISSLKVIWRKDSKLDEAIENDKRYKLC 60
M+S P +LFS+LR+FKS QS F + V QIRS+SSLKVIWRKDS+LDEAIENDKRYKLC
Sbjct: 1 MLSTPYALFSYLRSFKSAQSCFVRRKFVLQIRSVSSLKVIWRKDSRLDEAIENDKRYKLC 60
Query: 61 ARVVREVLSEPGQVMPLRYLEKRRQRLRLNVKIQTFLSRNPGLFDTYYDKIKPKSDPVLF 120
ARVVREVL+EPGQV+PLRYLEKRRQRLRLNV I+TF+S NPGL +TYYD+IKPKS+PVLF
Sbjct: 61 ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPGLLNTYYDRIKPKSEPVLF 120
Query: 121 LRSSDRLREFLEEEKRIVVDNEEVIVSKLCKLLMMSKDNFLSVDKLVHVKRDFGFPNDFL 180
LR SDRLR FLEEEKRI ++NE +IVSKLCKLLM+SKD LSVDKLV VKR+FGFPNDFL
Sbjct: 121 LRPSDRLRGFLEEEKRITMENEALIVSKLCKLLMISKDKVLSVDKLVQVKREFGFPNDFL 180
Query: 181 VDLVPKYPEYFQIVGSPGEGKSFLQLVSRNPNFAKSVIERRAEDESRSTGVRVRPNFNYN 240
V+LVPKYPEYFQI+GSPG+ KSFLQLVSRNP+FAKSVIERRAEDES STG+ +RPNFNYN
Sbjct: 181 VNLVPKYPEYFQIIGSPGDEKSFLQLVSRNPDFAKSVIERRAEDESISTGIDIRPNFNYN 240
Query: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQSSPEMEKRTVGVFHELLSLSLFKRI 300
LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQ+SPEMEKRTVGVFHELLSLSLFKRI
Sbjct: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTVGVFHELLSLSLFKRI 300
Query: 301 AVPTLGKFSDEYRFSNAFSSAFTRHSGIFYMSLKGGIETAMLREAYKGDQLIDCDPLLEI 360
VP LGKFSDEYRFSNAFSS FTRHSGIFY+SLKGGIETAMLREAYKG QLIDCDPLLEI
Sbjct: 301 PVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLLEI 360
Query: 361 KDKFVELLEVGWKERAEQRRQQGKQLKEDMEFVATRAE 399
KDKFVELLE GW+ERAEQRRQQ KQ++ DMEF+A RA+
Sbjct: 361 KDKFVELLEEGWRERAEQRRQQAKQVRNDMEFMAARAD 398
BLAST of Sed0001813 vs. NCBI nr
Match:
KAG6575893.1 (Protein WHAT'S THIS FACTOR 1-like, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 677.6 bits (1747), Expect = 7.1e-191
Identity = 335/398 (84.17%), Postives = 367/398 (92.21%), Query Frame = 0
Query: 1 MISNPQSLFSHLRTFKSVQSSFTNPEIVSQIRSISSLKVIWRKDSKLDEAIENDKRYKLC 60
M+S P +LFS+LR+FKS QS F + V QIR++SSLKVIWRKDS+LDEAIENDKRYKLC
Sbjct: 1 MLSKPYALFSYLRSFKSAQSCFVRRKFVLQIRAVSSLKVIWRKDSRLDEAIENDKRYKLC 60
Query: 61 ARVVREVLSEPGQVMPLRYLEKRRQRLRLNVKIQTFLSRNPGLFDTYYDKIKPKSDPVLF 120
ARVVREVL+EPGQV+PLRYLEKRRQRLRLNV I+TF+S NPGL DTYYD+IKPKS+PVLF
Sbjct: 61 ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPGLLDTYYDRIKPKSEPVLF 120
Query: 121 LRSSDRLREFLEEEKRIVVDNEEVIVSKLCKLLMMSKDNFLSVDKLVHVKRDFGFPNDFL 180
LR SDRLR FLEEEKRI ++NE +IVSKLCKLLM+SKD LSVDKLV VKR+FGFPNDFL
Sbjct: 121 LRPSDRLRGFLEEEKRITMENEALIVSKLCKLLMISKDKVLSVDKLVQVKREFGFPNDFL 180
Query: 181 VDLVPKYPEYFQIVGSPGEGKSFLQLVSRNPNFAKSVIERRAEDESRSTGVRVRPNFNYN 240
V+LVPKYPEYFQI+GSPG+ KSFLQLVSRNP+FAKSVIERRAEDES STG+ +RPNFNYN
Sbjct: 181 VNLVPKYPEYFQIIGSPGDEKSFLQLVSRNPDFAKSVIERRAEDESISTGIDIRPNFNYN 240
Query: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQSSPEMEKRTVGVFHELLSLSLFKRI 300
LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQ+SPEMEKRTVGVFHELLSLSLFKRI
Sbjct: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTVGVFHELLSLSLFKRI 300
Query: 301 AVPTLGKFSDEYRFSNAFSSAFTRHSGIFYMSLKGGIETAMLREAYKGDQLIDCDPLLEI 360
VP LGKFSDEYRFSNAFSS FTRHSGIFY+SLKGGIETAMLREAYKG QLIDCDPL EI
Sbjct: 301 PVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLFEI 360
Query: 361 KDKFVELLEVGWKERAEQRRQQGKQLKEDMEFVATRAE 399
KDKFVELLE GW+ERAEQRRQQ KQ++ DMEF+A RA+
Sbjct: 361 KDKFVELLEEGWRERAEQRRQQAKQVRNDMEFMAARAD 398
BLAST of Sed0001813 vs. NCBI nr
Match:
XP_038899043.1 (protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Benincasa hispida])
HSP 1 Score: 670.6 bits (1729), Expect = 8.7e-189
Identity = 334/396 (84.34%), Postives = 365/396 (92.17%), Query Frame = 0
Query: 1 MISNPQSLFSHLRTFKSVQSSFTNPEIVSQIRSISSLKVIWRKDSKLDEAIENDKRYKLC 60
M+S P +LFS LR+FKS S + EIV QIR ISSLKVIWRKD +LDEAIENDKRYKLC
Sbjct: 1 MLSTPHTLFSCLRSFKSAHPSLLSQEIVFQIRHISSLKVIWRKDYRLDEAIENDKRYKLC 60
Query: 61 ARVVREVLSEPGQVMPLRYLEKRRQRLRLNVKIQTFLSRNPGLFDTYYDKIKPKSDPVLF 120
ARVVREVL+EPGQV+PLRYLEKRRQRLRLNV ++ F+S NPGLF+TYYD+IKPKS+PVLF
Sbjct: 61 ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSVKMFMSCNPGLFETYYDRIKPKSEPVLF 120
Query: 121 LRSSDRLREFLEEEKRIVVDNEEVIVSKLCKLLMMSKDNFLSVDKLVHVKRDFGFPNDFL 180
LR+SDRLR FLEEEKRI ++NE +IVSKLCKLLM+SKD LSVDKLVHVKR+FGFPNDFL
Sbjct: 121 LRASDRLRGFLEEEKRITMENEGLIVSKLCKLLMISKDKMLSVDKLVHVKREFGFPNDFL 180
Query: 181 VDLVPKYPEYFQIVGSPGEGKSFLQLVSRNPNFAKSVIERRAEDESRSTGVRVRPNFNYN 240
V+LVPKYPEYFQIVGSPGEGKSFLQLVSRNP+FAKSVIERRAEDES STG+R+RPNFNY
Sbjct: 181 VNLVPKYPEYFQIVGSPGEGKSFLQLVSRNPDFAKSVIERRAEDESISTGIRIRPNFNYK 240
Query: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQSSPEMEKRTVGVFHELLSLSLFKRI 300
LPPGF LRKEMREWVRDWLELDYISPYEDVSHLAQSSPEMEKRTVGVFHELLSLSLFKRI
Sbjct: 241 LPPGFILRKEMREWVRDWLELDYISPYEDVSHLAQSSPEMEKRTVGVFHELLSLSLFKRI 300
Query: 301 AVPTLGKFSDEYRFSNAFSSAFTRHSGIFYMSLKGGIETAMLREAYKGDQLIDCDPLLEI 360
VPTLGKFSDEYRFSNAFSS FTRHSGIFY+SLKGGIE AMLREAY+G QLID DPLLEI
Sbjct: 301 PVPTLGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIENAMLREAYEGSQLIDRDPLLEI 360
Query: 361 KDKFVELLEVGWKERAEQRRQQGKQLKEDMEFVATR 397
KDKFVELLE GW+ERAEQRRQ+ KQL++DM+F+A R
Sbjct: 361 KDKFVELLEQGWRERAEQRRQRAKQLRKDMDFMAAR 396
BLAST of Sed0001813 vs. ExPASy Swiss-Prot
Match:
A0MFS5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)
HSP 1 Score: 189.9 bits (481), Expect = 5.9e-47
Identity = 126/359 (35.10%), Postives = 198/359 (55.15%), Query Frame = 0
Query: 42 RKDSKLDEAIENDKRYKLCARVVREVLSEPGQVMPLRYLEKRRQRLRLNVKIQ--TFLSR 101
RK+ D ++ DK+ KL + + ++S+P ++M LR L K R+ L L + + L +
Sbjct: 79 RKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFIALLRK 138
Query: 102 NPGLFDTYYDKIKPKSDPVLFLRSSDRLREFLEEEKRIVVDNEEVIVSKLCKLLMMSKDN 161
PG+F+ ++ + + F +S+ R +L +E RI + E+V+V KL KL+MMS D
Sbjct: 139 YPGVFEI----VEEGAYSLRFKMTSEAERLYL-DEMRIRNELEDVLVVKLRKLVMMSIDK 198
Query: 162 FLSVDKLVHVKRDFGFPNDFLVDLVPKYPEYFQIVGSPGEGKSFLQLVSRNPNFAKSVIE 221
+ ++K+ H+K D G P +F + +YP+YF++V +P G + L+L +P A S E
Sbjct: 199 RILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTP-RGPA-LELTHWDPELAVSAAE 258
Query: 222 ------RRAEDESRSTGVRVRPNFN-YNLPPGFFLRKEMREWVRDWLELDYISPYEDVSH 281
R E E R+ + P FN LP G L K + + ++ YISPY+D SH
Sbjct: 259 LSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQYISPYKDFSH 318
Query: 282 LAQSSPEMEKRTVGVFHELLSLSLFKRIAVPTLGKFSDEYRFSNAFSSAFTRHSGIFYMS 341
L + E EK GV HELLSL+ KR V L F +E+RFS RH +FY+S
Sbjct: 319 LRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDLFYVS 378
Query: 342 LKGGIETAMLREAYKGDQLIDCDPLLEIKDKFVELLEVGWKER--AEQRRQQGKQLKED 390
LKG ++ LREAY+ +LID DPL +K+K L+ V R ++ ++G++++ D
Sbjct: 379 LKGERDSVFLREAYRNSELIDKDPLTLVKEKMRALVSVPRFPRRGGPRKDEEGREVEID 430
BLAST of Sed0001813 vs. ExPASy Swiss-Prot
Match:
Q65XL5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)
HSP 1 Score: 182.6 bits (462), Expect = 9.4e-45
Identity = 124/356 (34.83%), Postives = 184/356 (51.69%), Query Frame = 0
Query: 25 PEIVSQIRSISSLKVIWRKDSKLDEAIENDKRYKLCARVVREVLSEPGQVMPLRYLEKRR 84
P ++ ++ V RK+ D I+ DK+ KL ++ ++S P +VM LR L + R
Sbjct: 47 PGAPRRLAVVAQAAVKRRKEIPFDNVIQRDKKLKLVLKLRNILVSNPDRVMSLRDLGRFR 106
Query: 85 QRLRLNVK--IQTFLSRNPGLFDTYYDKIKPKSDPVLFLRSSDRLREFLEEEKRIVVDNE 144
+ L L K + L R PG+F+ + + L R + +E + ++E
Sbjct: 107 RDLGLTRKRRLIALLKRFPGVFEVVEEGVYS-----LRFRLTPAAERLYLDELHLKNESE 166
Query: 145 EVIVSKLCKLLMMSKDNFLSVDKLVHVKRDFGFPNDFLVDLVPKYPEYFQIVG-SPGEGK 204
+ V+KL KLLMMS+D + ++K+ H+K D G P +F + +YP+YF++V G G
Sbjct: 167 GLAVTKLRKLLMMSQDKRILIEKIAHLKNDLGLPPEFRDTICLRYPQYFRVVQMDRGPG- 226
Query: 205 SFLQLVSRNPNFAKSVI-----ERRAEDESRSTGVRVRP-NFN-YNLPPGFFLRKEMREW 264
L+L +P A S E RA +E + RP FN LP G L +
Sbjct: 227 --LELTHWDPELAVSAAEVAEEENRAREEQERNLIIDRPLKFNRVKLPQGLKLSRGEARR 286
Query: 265 VRDWLELDYISPYEDVSHLAQSSPEMEKRTVGVFHELLSLSLFKRIAVPTLGKFSDEYRF 324
V + E+ YISPY D SHL S E EK GV HE+LSL+L KR V L F +E+RF
Sbjct: 287 VAQFKEMPYISPYSDFSHLRSGSAEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRF 346
Query: 325 SNAFSSAFTRHSGIFYMSLKGGIETAMLREAYKGDQLIDCDPLLEIKDKFVELLEV 371
S + RH +FY+SLKG ++ LREAYK QL++ L+ +K+K L+ V
Sbjct: 347 SQSLRGMLIRHPDMFYVSLKGDRDSVFLREAYKNSQLVEKSKLVLLKEKMRALVAV 394
BLAST of Sed0001813 vs. ExPASy Swiss-Prot
Match:
B6TTV8 (Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)
HSP 1 Score: 178.7 bits (452), Expect = 1.4e-43
Identity = 118/339 (34.81%), Postives = 181/339 (53.39%), Query Frame = 0
Query: 42 RKDSKLDEAIENDKRYKLCARVVREVLSEPGQVMPLRYLEKRRQRLRLNVK--IQTFLSR 101
RK++ D I+ DK+ KL ++ ++++P +VM LR L + R+ L L K + L R
Sbjct: 58 RKEAPFDTVIQRDKKLKLVLKLRNILVAQPDRVMSLRELGRFRRDLGLTRKRRLIALLRR 117
Query: 102 NPGLFDTYYDKIKPKSDPVLFLRSSDRLREFLEEEKRIVVDNEEVIVSKLCKLLMMSKDN 161
PG+FD + + L R + +E R+ ++E + V+KL KLLMMS++
Sbjct: 118 FPGVFDVVEEGVYS-----LRFRLTPAAERLYLDELRLRNESEGLAVAKLRKLLMMSQEK 177
Query: 162 FLSVDKLVHVKRDFGFPNDFLVDLVPKYPEYFQIVGSPGEGKSFLQLVSRNPNFAKSVIE 221
+ ++K+ H+K D G P +F + +YP+YF++V + L+L +P A S E
Sbjct: 178 RILIEKVAHLKHDLGLPPEFRDTVCLRYPQYFRVVRM--DRGPALELTHWDPELAVSAAE 237
Query: 222 RRAEDESRSTGVRVRP-------NFN-YNLPPGFFLRKEMREWVRDWLELDYISPYEDVS 281
AE+ESR+ R FN LP G L + + + E+ YISPY D S
Sbjct: 238 -LAEEESRAREAEERNLIIDRPLKFNRVRLPKGLKLTRGEARRIARFKEMPYISPYADFS 297
Query: 282 HLAQSSPEMEKRTVGVFHELLSLSLFKRIAVPTLGKFSDEYRFSNAFSSAFTRHSGIFYM 341
HL S E EK GV HE+LSL++ KR V L F +E+RFS + RH +FY+
Sbjct: 298 HLRSGSDEKEKHACGVVHEILSLTVEKRTLVDHLTHFREEFRFSQSLRGMIIRHPDMFYV 357
Query: 342 SLKGGIETAMLREAYKGDQLIDCDPLLEIKDKFVELLEV 371
S KG ++ LREAYK QL++ + L+ +K+K L+ V
Sbjct: 358 SFKGDRDSVFLREAYKDSQLVEKNQLVLLKEKMRALVAV 388
BLAST of Sed0001813 vs. ExPASy Swiss-Prot
Match:
Q689D6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)
HSP 1 Score: 154.1 bits (388), Expect = 3.6e-36
Identity = 105/375 (28.00%), Postives = 182/375 (48.53%), Query Frame = 0
Query: 43 KDSKLDEAIENDKRYKLCARVVREVLSEPGQVMPLRYLEKRRQRLRLNVKIQ---TFLSR 102
+D D +E +K+ + + +LS+P + + L+ +RL L K FL +
Sbjct: 48 RDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARRLGLGFKQHEPGAFLLK 107
Query: 103 NPGLFDTYYDKIKPKSDPVLFLRSSDRLREFLEEEKRIVVDNEEVIVSKLCKLLMMSKDN 162
P +F+ Y ++ +L+ R + + + + E V+D V++L KL+MMS
Sbjct: 108 FPHVFEIYEHPVQ----RILYCRLTRKALDQIRHEHEAVLDQIPDAVTRLRKLVMMSNTG 167
Query: 163 FLSVDKLVHVKRDFGFPNDFLVDLVPKYPEYFQIVGSPGEGKSFLQLVSRNPNFAKSVIE 222
+ ++ + + +FG P DF ++ K+P++F+++ ++++V ++PN + IE
Sbjct: 168 RIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKDPNLSICAIE 227
Query: 223 RRAEDESRSTGV---RVRPNFNYNLPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQS 282
R E E R+ G+ VR +F N PPGF + K R V W L Y SPYED+S
Sbjct: 228 RVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPYEDISGYDLR 287
Query: 283 SPE----MEKRTVGVFHELLSLSLFKRIAVPTLGKFSDEYRFSNAFSSAFTRHSGIFYMS 342
S E +EKR+V HELLSL++ K+I + + F + +H GIFY+S
Sbjct: 288 SMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQHQGIFYIS 347
Query: 343 LKGG---IETAMLREAYKGDQLIDCDPLLEIKDKFVELLEVGWKERAEQRRQQGKQLKED 402
+G + T LRE YK +L++ + + + + EL+ ++ K D
Sbjct: 348 TRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELV-----------LMSPRKAKVD 407
Query: 403 MEFVATRAEYGEEND 405
E V R +E+D
Sbjct: 408 AELVRYRDGLDDEDD 407
BLAST of Sed0001813 vs. ExPASy Swiss-Prot
Match:
Q9ZUZ6 (Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1)
HSP 1 Score: 129.4 bits (324), Expect = 9.5e-29
Identity = 97/364 (26.65%), Postives = 176/364 (48.35%), Query Frame = 0
Query: 8 LFSHLRTFKSVQSSFTNPEIVSQIRSISSLKVIWRKDSKLD--EAIENDKRYKLCARVVR 67
+ S R K+V SS TN ++Q R+ + + W++D D E I + K +
Sbjct: 1 MLSIRRHAKTVASSCTN---LTQKRTYVDVYMKWKRDPYFDNIEHILRSSQLKSVVSLKN 60
Query: 68 EVLSEPGQVMPLRYLEKRRQRLRLNVKIQTFLSRNPGLFDTYYDKIKPKSDPVLFLRSSD 127
++ EP + +P+ + K+ ++ ++ KI FL + P +F+ + + P+ + + + R +
Sbjct: 61 CIVQEPNRCIPISAISKKTRQFDVSTKIAHFLRKFPSIFEEF---VGPEYN-LPWFRLTP 120
Query: 128 RLREFLEEEKRIVVDNEEVIVSKLCKLLMMSKDNFLSVDKLVHVKRDFGFPNDFLVDLVP 187
E +E+ + + + + +L KL++MSKDN L + + +K G P+D+L
Sbjct: 121 EATELDRQERVVYQTSADDLRDRLKKLILMSKDNVLPLSIVQGMKWYLGLPDDYLQFPDM 180
Query: 188 KYPEYFQIVGSPGEGKSFLQLVSRNPNFAKSVIERRAEDESRSTGVRVRPNFNYNLPPGF 247
F+ V +G L + + SV+++ A + R F G
Sbjct: 181 NLDSSFRFVDME-DGVKGLAVDYNGGDKVLSVLQKNAMKKRRGEVSLEEIEFPLFPSKGC 240
Query: 248 FLRKEMREWVRDWLELDYISPYEDVSHLAQSSPEMEKRTVGVFHELLSLSLFKRIAVPTL 307
LR ++ +W+ ++ +L Y+SPY+D S L SS EKR VG HELL L + L
Sbjct: 241 RLRVKIEDWLMEFQKLPYVSPYDDYSCLDPSSDIAEKRVVGFLHELLCLFVEHSAERKKL 300
Query: 308 GKFSDEYRFSNAFSSAFTRHSGIFYMSLKGGIETAMLREAYKGDQLIDCDPLLEIKDKFV 367
+ AF RH IFY+S+K TA+LRE Y+ ++ P+L ++ K++
Sbjct: 301 LCLKKHFGLPQKVHKAFERHPQIFYLSMKNKTCTAILREPYRDKASVETHPVLGVRKKYI 356
Query: 368 ELLE 370
+L++
Sbjct: 361 QLMK 356
BLAST of Sed0001813 vs. ExPASy TrEMBL
Match:
A0A6J1JZH3 (protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111488826 PE=4 SV=1)
HSP 1 Score: 679.1 bits (1751), Expect = 1.2e-191
Identity = 334/398 (83.92%), Postives = 369/398 (92.71%), Query Frame = 0
Query: 1 MISNPQSLFSHLRTFKSVQSSFTNPEIVSQIRSISSLKVIWRKDSKLDEAIENDKRYKLC 60
M+S P +LFS+LR+FKS QSSF + QIR++SSLKVIWRKDS+LDEAIENDKRYKLC
Sbjct: 1 MLSTPYALFSYLRSFKSAQSSFVRRKFFLQIRAVSSLKVIWRKDSRLDEAIENDKRYKLC 60
Query: 61 ARVVREVLSEPGQVMPLRYLEKRRQRLRLNVKIQTFLSRNPGLFDTYYDKIKPKSDPVLF 120
ARVVREVL+EPGQV+PLRYLEKRRQRLRLNV I+TF+S NPGL +TY D+IKPKS+PVLF
Sbjct: 61 ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPGLLNTYCDRIKPKSEPVLF 120
Query: 121 LRSSDRLREFLEEEKRIVVDNEEVIVSKLCKLLMMSKDNFLSVDKLVHVKRDFGFPNDFL 180
LR SDRLR FLEEEKRI ++NE ++VSKLCKLLM+SKD LSVDKLVHVKR+FGFPNDFL
Sbjct: 121 LRPSDRLRGFLEEEKRITMENEALLVSKLCKLLMISKDKLLSVDKLVHVKREFGFPNDFL 180
Query: 181 VDLVPKYPEYFQIVGSPGEGKSFLQLVSRNPNFAKSVIERRAEDESRSTGVRVRPNFNYN 240
V+LVPKYPEYFQI+GSPG+ KSFLQLVSRNPNFAKSVIERRAEDES STG+++RPNFNYN
Sbjct: 181 VNLVPKYPEYFQIIGSPGDEKSFLQLVSRNPNFAKSVIERRAEDESISTGIQIRPNFNYN 240
Query: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQSSPEMEKRTVGVFHELLSLSLFKRI 300
LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQ+SPEMEKRTVG+FHELLSLSLFKRI
Sbjct: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTVGIFHELLSLSLFKRI 300
Query: 301 AVPTLGKFSDEYRFSNAFSSAFTRHSGIFYMSLKGGIETAMLREAYKGDQLIDCDPLLEI 360
VP LGKFSDEYRFSNAFSS FTRHSGIFY+SLKGGIETAMLREAYKG QLIDCDPLLEI
Sbjct: 301 PVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLLEI 360
Query: 361 KDKFVELLEVGWKERAEQRRQQGKQLKEDMEFVATRAE 399
KDKFVELLE GW+ERAEQRRQQ KQ++ DMEF+A RA+
Sbjct: 361 KDKFVELLEEGWRERAEQRRQQAKQVRNDMEFMAARAD 398
BLAST of Sed0001813 vs. ExPASy TrEMBL
Match:
A0A6J1GN70 (protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111456044 PE=4 SV=1)
HSP 1 Score: 678.3 bits (1749), Expect = 2.0e-191
Identity = 336/398 (84.42%), Postives = 368/398 (92.46%), Query Frame = 0
Query: 1 MISNPQSLFSHLRTFKSVQSSFTNPEIVSQIRSISSLKVIWRKDSKLDEAIENDKRYKLC 60
M+S P +LFS+LR+FKS QS F + V QIRS+SSLKVIWRKDS+LDEAIENDKRYKLC
Sbjct: 1 MLSTPYALFSYLRSFKSAQSCFVRRKFVLQIRSVSSLKVIWRKDSRLDEAIENDKRYKLC 60
Query: 61 ARVVREVLSEPGQVMPLRYLEKRRQRLRLNVKIQTFLSRNPGLFDTYYDKIKPKSDPVLF 120
ARVVREVL+EPGQV+PLRYLEKRRQRLRLNV I+TF+S NPGL +TYYD+IKPKS+PVLF
Sbjct: 61 ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPGLLNTYYDRIKPKSEPVLF 120
Query: 121 LRSSDRLREFLEEEKRIVVDNEEVIVSKLCKLLMMSKDNFLSVDKLVHVKRDFGFPNDFL 180
LR SDRLR FLEEEKRI ++NE +IVSKLCKLLM+SKD LSVDKLV VKR+FGFPNDFL
Sbjct: 121 LRPSDRLRGFLEEEKRITMENEALIVSKLCKLLMISKDKVLSVDKLVQVKREFGFPNDFL 180
Query: 181 VDLVPKYPEYFQIVGSPGEGKSFLQLVSRNPNFAKSVIERRAEDESRSTGVRVRPNFNYN 240
V+LVPKYPEYFQI+GSPG+ KSFLQLVSRNP+FAKSVIERRAEDES STG+ +RPNFNYN
Sbjct: 181 VNLVPKYPEYFQIIGSPGDEKSFLQLVSRNPDFAKSVIERRAEDESISTGIDIRPNFNYN 240
Query: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQSSPEMEKRTVGVFHELLSLSLFKRI 300
LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQ+SPEMEKRTVGVFHELLSLSLFKRI
Sbjct: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTVGVFHELLSLSLFKRI 300
Query: 301 AVPTLGKFSDEYRFSNAFSSAFTRHSGIFYMSLKGGIETAMLREAYKGDQLIDCDPLLEI 360
VP LGKFSDEYRFSNAFSS FTRHSGIFY+SLKGGIETAMLREAYKG QLIDCDPLLEI
Sbjct: 301 PVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLLEI 360
Query: 361 KDKFVELLEVGWKERAEQRRQQGKQLKEDMEFVATRAE 399
KDKFVELLE GW+ERAEQRRQQ KQ++ DMEF+A RA+
Sbjct: 361 KDKFVELLEEGWRERAEQRRQQAKQVRNDMEFMAARAD 398
BLAST of Sed0001813 vs. ExPASy TrEMBL
Match:
A0A6J1D830 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Momordica charantia OX=3673 GN=LOC111018487 PE=4 SV=1)
HSP 1 Score: 666.0 bits (1717), Expect = 1.0e-187
Identity = 330/397 (83.12%), Postives = 365/397 (91.94%), Query Frame = 0
Query: 1 MISNPQSLFSHLRTFKSVQSSFTNPEIVSQIRSISSLKVIWRKDSKLDEAIENDKRYKLC 60
M+ P++LFS+LR+F+S QSS +PEI+ QIRSISSLKV+WRKD +LDEAIE+DKRYKLC
Sbjct: 1 MLFTPRTLFSYLRSFRSAQSSSISPEIIFQIRSISSLKVVWRKDPRLDEAIESDKRYKLC 60
Query: 61 ARVVREVLSEPGQVMPLRYLEKRRQRLRLNVKIQTFLSRNPGLFDTYYDKIKPKSDPVLF 120
ARVVREVL+EPGQV+PLRYLEKRR RLRLNVKI+TF++RNPGLFDTYYD+IKPKS+PVLF
Sbjct: 61 ARVVREVLNEPGQVIPLRYLEKRRPRLRLNVKIETFMNRNPGLFDTYYDRIKPKSEPVLF 120
Query: 121 LRSSDRLREFLEEEKRIVVDNEEVIVSKLCKLLMMSKDNFLSVDKLVHVKRDFGFPNDFL 180
+R+SDRLREFL EE+RI +NE +IVSKLCKLLM+SKD LSVDKLVHVKR+FGFPNDFL
Sbjct: 121 IRASDRLREFLXEEERITTENEALIVSKLCKLLMISKDKVLSVDKLVHVKREFGFPNDFL 180
Query: 181 VDLVPKYPEYFQIVGSPGEGKSFLQLVSRNPNFAKSVIERRAEDESRSTGVRVRPNFNYN 240
V+LVPKYPEYFQ+VGSPGEGKSFLQLVSRNPNF+KSVIE RA+DESR TG+RVRPNF+Y
Sbjct: 181 VNLVPKYPEYFQLVGSPGEGKSFLQLVSRNPNFSKSVIETRADDESRLTGIRVRPNFDYK 240
Query: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQSSPEMEKRTVGVFHELLSLSLFKRI 300
LPPGF LRKEMREWVRDWLELDYISPYEDV+HLAQ+SPEMEKRTV VFHELLSLSL KRI
Sbjct: 241 LPPGFILRKEMREWVRDWLELDYISPYEDVTHLAQASPEMEKRTVAVFHELLSLSLHKRI 300
Query: 301 AVPTLGKFSDEYRFSNAFSSAFTRHSGIFYMSLKGGIETAMLREAYKGDQLIDCDPLLEI 360
VP LGKFSDEYRFSNAFSS FTRHSGIFYMSLKGGI T MLREAYKGDQLID DPLLEI
Sbjct: 301 PVPILGKFSDEYRFSNAFSSIFTRHSGIFYMSLKGGIGTGMLREAYKGDQLIDRDPLLEI 360
Query: 361 KDKFVELLEVGWKERAEQRRQQGKQLKEDMEFVATRA 398
KDKFVELLE GW+ERAE RRQQ KQLK DME +A RA
Sbjct: 361 KDKFVELLEEGWRERAEWRRQQTKQLKMDMELMAARA 397
BLAST of Sed0001813 vs. ExPASy TrEMBL
Match:
A0A5D3DBW6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold328G00130 PE=4 SV=1)
HSP 1 Score: 661.4 bits (1705), Expect = 2.6e-186
Identity = 325/397 (81.86%), Postives = 360/397 (90.68%), Query Frame = 0
Query: 1 MISNPQSLFSHLRTFKSVQSSFTNPEIVSQIRSISSLKVIWRKDSKLDEAIENDKRYKLC 60
M S P SL S+LR KS SF + EI+ Q R ISSLKV+WRKD +LDEAIENDKRYKLC
Sbjct: 1 MFSTPHSLISYLRRIKSPHPSFLSQEIIVQFRPISSLKVVWRKDYRLDEAIENDKRYKLC 60
Query: 61 ARVVREVLSEPGQVMPLRYLEKRRQRLRLNVKIQTFLSRNPGLFDTYYDKIKPKSDPVLF 120
ARVVREVL+EPGQV+PLRYLEKRR+RLRLNV ++ FL NPGL DTYYD+IKPKS+PVLF
Sbjct: 61 ARVVREVLNEPGQVIPLRYLEKRRERLRLNVSVKAFLGFNPGLLDTYYDRIKPKSEPVLF 120
Query: 121 LRSSDRLREFLEEEKRIVVDNEEVIVSKLCKLLMMSKDNFLSVDKLVHVKRDFGFPNDFL 180
LR+SDRLR FLEEEKRI+++NEE+IVSKLCKLLMMSKD LSVDKL+HVKRDFGFPNDFL
Sbjct: 121 LRASDRLRRFLEEEKRIMMENEELIVSKLCKLLMMSKDKMLSVDKLLHVKRDFGFPNDFL 180
Query: 181 VDLVPKYPEYFQIVGSPGEGKSFLQLVSRNPNFAKSVIERRAEDESRSTGVRVRPNFNYN 240
V+LVPKYPEYFQIVGSPGEGKSFLQLV+RNP+FAKSVIERRAEDESRSTG+R+RPNF+Y
Sbjct: 181 VNLVPKYPEYFQIVGSPGEGKSFLQLVTRNPDFAKSVIERRAEDESRSTGIRMRPNFDYK 240
Query: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQSSPEMEKRTVGVFHELLSLSLFKRI 300
LPPGF LRKEMREWVRDWLELDY+SPYEDVS+L QSSPEMEKRTVGVFHELLSLSL KRI
Sbjct: 241 LPPGFILRKEMREWVRDWLELDYLSPYEDVSYLEQSSPEMEKRTVGVFHELLSLSLLKRI 300
Query: 301 AVPTLGKFSDEYRFSNAFSSAFTRHSGIFYMSLKGGIETAMLREAYKGDQLIDCDPLLEI 360
VP LGKF DEYRFSNAFSS FTRHSGIFY+SLKGGIETAMLREAY+GDQLIDCDPLLEI
Sbjct: 301 PVPILGKFGDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYQGDQLIDCDPLLEI 360
Query: 361 KDKFVELLEVGWKERAEQRRQQGKQLKEDMEFVATRA 398
K+KFVELLE GW+ERAEQRR+Q + ++DMEF+ RA
Sbjct: 361 KNKFVELLEQGWRERAEQRREQANERRKDMEFMGARA 397
BLAST of Sed0001813 vs. ExPASy TrEMBL
Match:
A0A1S3BS57 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103492691 PE=4 SV=1)
HSP 1 Score: 661.4 bits (1705), Expect = 2.6e-186
Identity = 326/397 (82.12%), Postives = 360/397 (90.68%), Query Frame = 0
Query: 1 MISNPQSLFSHLRTFKSVQSSFTNPEIVSQIRSISSLKVIWRKDSKLDEAIENDKRYKLC 60
M S P SL S+LR KS SF + EI+ Q R ISSLKV+WRKD +LDEAIENDKRYKLC
Sbjct: 1 MFSTPHSLISYLRRIKSPHPSFLSQEIIVQFRPISSLKVVWRKDYRLDEAIENDKRYKLC 60
Query: 61 ARVVREVLSEPGQVMPLRYLEKRRQRLRLNVKIQTFLSRNPGLFDTYYDKIKPKSDPVLF 120
ARVVREVL+EPGQV+PLRYLEKRR+RLRLNV ++ FL NPGL DTYYD+IKPKS+PVLF
Sbjct: 61 ARVVREVLNEPGQVIPLRYLEKRRERLRLNVSVKAFLGFNPGLLDTYYDRIKPKSEPVLF 120
Query: 121 LRSSDRLREFLEEEKRIVVDNEEVIVSKLCKLLMMSKDNFLSVDKLVHVKRDFGFPNDFL 180
LR+SDRLR FLEEEKRI+++NEE+IVSKLCKLLMMSKD LSVDKL+HVKRDFGFPNDFL
Sbjct: 121 LRASDRLRGFLEEEKRIMMENEELIVSKLCKLLMMSKDKMLSVDKLLHVKRDFGFPNDFL 180
Query: 181 VDLVPKYPEYFQIVGSPGEGKSFLQLVSRNPNFAKSVIERRAEDESRSTGVRVRPNFNYN 240
V+LVPKYPEYFQIVGSPGEGKSFLQLV+RNP+FAKSVIERRAEDESRSTG+R+RPNF+Y
Sbjct: 181 VNLVPKYPEYFQIVGSPGEGKSFLQLVTRNPDFAKSVIERRAEDESRSTGIRMRPNFDYK 240
Query: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQSSPEMEKRTVGVFHELLSLSLFKRI 300
LPPGF LRKEMREWVRDWLELDYISPYEDVS+L QSSPEMEKRTVGVFHELLSLSL KRI
Sbjct: 241 LPPGFILRKEMREWVRDWLELDYISPYEDVSYLEQSSPEMEKRTVGVFHELLSLSLLKRI 300
Query: 301 AVPTLGKFSDEYRFSNAFSSAFTRHSGIFYMSLKGGIETAMLREAYKGDQLIDCDPLLEI 360
VP LGKF DEYRFSNAFSS FTRHSGIFY+SLKGGIETAMLREAY+GDQLIDCDPLLEI
Sbjct: 301 PVPILGKFGDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYQGDQLIDCDPLLEI 360
Query: 361 KDKFVELLEVGWKERAEQRRQQGKQLKEDMEFVATRA 398
K+KFVELLE GW+ERAEQRR+Q + ++DMEF+ RA
Sbjct: 361 KNKFVELLEQGWRERAEQRREQANERRKDMEFMGARA 397
BLAST of Sed0001813 vs. TAIR 10
Match:
AT3G63090.1 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 540.0 bits (1390), Expect = 1.7e-153
Identity = 263/364 (72.25%), Postives = 311/364 (85.44%), Query Frame = 0
Query: 30 QIRSISSLKVIWRKDSKLDEAIENDKRYKLCARVVREVLSEPGQVMPLRYLEKRRQRLRL 89
QIR ISSLKV+W+KD++LDEAIE DKRYKLCARVV+EVL+EPGQV+PLRYLEKRR+RLRL
Sbjct: 27 QIRWISSLKVVWKKDTRLDEAIEQDKRYKLCARVVKEVLNEPGQVIPLRYLEKRRERLRL 86
Query: 90 NVKIQTFLSRNPGLFDTYYDKIKPKSDPVLFLRSSDRLREFLEEEKRIVVDNEEVIVSKL 149
K ++F+ NP LF+ YYD+IKPKSDPV FLR + RLR FL+EE+RI +NE ++VSKL
Sbjct: 87 TFKAKSFVEMNPSLFEIYYDRIKPKSDPVQFLRPTPRLRAFLDEEQRIYSENEPLLVSKL 146
Query: 150 CKLLMMSKDNFLSVDKLVHVKRDFGFPNDFLVDLVPKYPEYFQIVGSPGEGKSFLQLVSR 209
C+LLMM+KD +S DKLVHVKRDFGFPNDFL+ LV KYP YF++ G P EGKSFL+LVS
Sbjct: 147 CQLLMMAKDKVISADKLVHVKRDFGFPNDFLMKLVQKYPNYFRLTGLPEEGKSFLELVSW 206
Query: 210 NPNFAKSVIERRAEDESRSTGVRVRPNFNYNLPPGFFLRKEMREWVRDWLELDYISPYED 269
NP+FAKS IE RAEDE+ TGVR+RPN+N LP GFFLRKEMREW RDWLE DYISPYED
Sbjct: 207 NPDFAKSKIELRAEDETLKTGVRIRPNYNVKLPSGFFLRKEMREWTRDWLEQDYISPYED 266
Query: 270 VSHLAQSSPEMEKRTVGVFHELLSLSLFKRIAVPTLGKFSDEYRFSNAFSSAFTRHSGIF 329
VSHL Q+S EMEKRTVGV HELLSLSL KR+ VPTLGKF DE+RFSNAFSS FTRHSGIF
Sbjct: 267 VSHLDQASKEMEKRTVGVVHELLSLSLLKRVPVPTLGKFCDEFRFSNAFSSVFTRHSGIF 326
Query: 330 YMSLKGGIETAMLREAYKGDQLIDCDPLLEIKDKFVELLEVGWKERAEQRRQQGKQLKED 389
Y+SLKGGI+TA+LREAYK D+L+D DPLL IKDKF+ LLE GW+ER ++ + Q +Q+++D
Sbjct: 327 YLSLKGGIKTAVLREAYKDDELVDRDPLLAIKDKFLRLLEEGWQERKDRLKLQREQVQKD 386
Query: 390 MEFV 394
E +
Sbjct: 387 REMM 390
BLAST of Sed0001813 vs. TAIR 10
Match:
AT2G31290.1 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 190.3 bits (482), Expect = 3.2e-48
Identity = 115/341 (33.72%), Postives = 186/341 (54.55%), Query Frame = 0
Query: 42 RKDSKLDEAIENDKRYKLCARVVREVLSEPGQVMPLRYLEKRRQRLRLNVKIQTFLSRNP 101
+KD L+ A+ +KR+ + +R+ +L P QV +++L+K+ + L L K +L + P
Sbjct: 29 KKDPDLESALSRNKRWIVNSRLKNIILRCPNQVASIKFLQKKFKTLDLQGKALNWLKKYP 88
Query: 102 GLFDTYYDKIKPKSDPVLFLRSSDRLREFLEEEKRIVVDNEEVIVSKLCKLLMMSKDNFL 161
F Y + + + R + + +EEE+ + E V+ +L KLLM+S + L
Sbjct: 89 CCFHVYLE------NDEYYCRLTKPMMTLVEEEELVKDTQEPVLADRLAKLLMLSVNQRL 148
Query: 162 SVDKLVHVKRDFGFPNDFLVDLVPKYPEYFQIVGSPGEGKSF-LQLVSRNPNFAKSVIER 221
+V KL KR FGFP+D+++ +VPKY + F++V G S ++L+ P A S +E
Sbjct: 149 NVVKLNEFKRSFGFPDDYVIRIVPKYSDVFRLVNYSGRKSSMEIELLLWKPELAVSAVEA 208
Query: 222 RAEDESRSTGVRVRPNFNYNLPPGFFLRKEMREWVR--DWLELDYISPYEDVSHLAQSSP 281
A+ P+F+ +LP + + W R ++ YISPYED L + S
Sbjct: 209 AAKK------CGSEPSFSCSLPSTW-----TKPWERFMEFNAFPYISPYEDHGDLVEGSK 268
Query: 282 EMEKRTVGVFHELLSLSLFKRIAVPTLGKFSDEYRFSNAFSSAFTRHSGIFYMSLKGGIE 341
E EKR+VG+ HELLSL+L+K++++ L F E+ + +H GIFY+ K +
Sbjct: 269 ESEKRSVGLVHELLSLTLWKKLSIVKLSHFKREFGLPEKLNGMLLKHPGIFYVGNKYQVH 328
Query: 342 TAMLREAYKGDQLIDCDPLLEIKDKFVELLEVGWKERAEQR 380
T +LRE Y G +LI DPL+ +KDKF EL++ G E +R
Sbjct: 329 TVILREGYNGSELIHKDPLVVVKDKFGELMQQGLYEYNHRR 352
BLAST of Sed0001813 vs. TAIR 10
Match:
AT2G31290.2 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 190.3 bits (482), Expect = 3.2e-48
Identity = 115/341 (33.72%), Postives = 186/341 (54.55%), Query Frame = 0
Query: 42 RKDSKLDEAIENDKRYKLCARVVREVLSEPGQVMPLRYLEKRRQRLRLNVKIQTFLSRNP 101
+KD L+ A+ +KR+ + +R+ +L P QV +++L+K+ + L L K +L + P
Sbjct: 29 KKDPDLESALSRNKRWIVNSRLKNIILRCPNQVASIKFLQKKFKTLDLQGKALNWLKKYP 88
Query: 102 GLFDTYYDKIKPKSDPVLFLRSSDRLREFLEEEKRIVVDNEEVIVSKLCKLLMMSKDNFL 161
F Y + + + R + + +EEE+ + E V+ +L KLLM+S + L
Sbjct: 89 CCFHVYLE------NDEYYCRLTKPMMTLVEEEELVKDTQEPVLADRLAKLLMLSVNQRL 148
Query: 162 SVDKLVHVKRDFGFPNDFLVDLVPKYPEYFQIVGSPGEGKSF-LQLVSRNPNFAKSVIER 221
+V KL KR FGFP+D+++ +VPKY + F++V G S ++L+ P A S +E
Sbjct: 149 NVVKLNEFKRSFGFPDDYVIRIVPKYSDVFRLVNYSGRKSSMEIELLLWKPELAVSAVEA 208
Query: 222 RAEDESRSTGVRVRPNFNYNLPPGFFLRKEMREWVR--DWLELDYISPYEDVSHLAQSSP 281
A+ P+F+ +LP + + W R ++ YISPYED L + S
Sbjct: 209 AAKK------CGSEPSFSCSLPSTW-----TKPWERFMEFNAFPYISPYEDHGDLVEGSK 268
Query: 282 EMEKRTVGVFHELLSLSLFKRIAVPTLGKFSDEYRFSNAFSSAFTRHSGIFYMSLKGGIE 341
E EKR+VG+ HELLSL+L+K++++ L F E+ + +H GIFY+ K +
Sbjct: 269 ESEKRSVGLVHELLSLTLWKKLSIVKLSHFKREFGLPEKLNGMLLKHPGIFYVGNKYQVH 328
Query: 342 TAMLREAYKGDQLIDCDPLLEIKDKFVELLEVGWKERAEQR 380
T +LRE Y G +LI DPL+ +KDKF EL++ G E +R
Sbjct: 329 TVILREGYNGSELIHKDPLVVVKDKFGELMQQGLYEYNHRR 352
BLAST of Sed0001813 vs. TAIR 10
Match:
AT4G01037.1 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 189.9 bits (481), Expect = 4.2e-48
Identity = 126/359 (35.10%), Postives = 198/359 (55.15%), Query Frame = 0
Query: 42 RKDSKLDEAIENDKRYKLCARVVREVLSEPGQVMPLRYLEKRRQRLRLNVKIQ--TFLSR 101
RK+ D ++ DK+ KL + + ++S+P ++M LR L K R+ L L + + L +
Sbjct: 79 RKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFIALLRK 138
Query: 102 NPGLFDTYYDKIKPKSDPVLFLRSSDRLREFLEEEKRIVVDNEEVIVSKLCKLLMMSKDN 161
PG+F+ ++ + + F +S+ R +L +E RI + E+V+V KL KL+MMS D
Sbjct: 139 YPGVFEI----VEEGAYSLRFKMTSEAERLYL-DEMRIRNELEDVLVVKLRKLVMMSIDK 198
Query: 162 FLSVDKLVHVKRDFGFPNDFLVDLVPKYPEYFQIVGSPGEGKSFLQLVSRNPNFAKSVIE 221
+ ++K+ H+K D G P +F + +YP+YF++V +P G + L+L +P A S E
Sbjct: 199 RILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTP-RGPA-LELTHWDPELAVSAAE 258
Query: 222 ------RRAEDESRSTGVRVRPNFN-YNLPPGFFLRKEMREWVRDWLELDYISPYEDVSH 281
R E E R+ + P FN LP G L K + + ++ YISPY+D SH
Sbjct: 259 LSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQYISPYKDFSH 318
Query: 282 LAQSSPEMEKRTVGVFHELLSLSLFKRIAVPTLGKFSDEYRFSNAFSSAFTRHSGIFYMS 341
L + E EK GV HELLSL+ KR V L F +E+RFS RH +FY+S
Sbjct: 319 LRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDLFYVS 378
Query: 342 LKGGIETAMLREAYKGDQLIDCDPLLEIKDKFVELLEVGWKER--AEQRRQQGKQLKED 390
LKG ++ LREAY+ +LID DPL +K+K L+ V R ++ ++G++++ D
Sbjct: 379 LKGERDSVFLREAYRNSELIDKDPLTLVKEKMRALVSVPRFPRRGGPRKDEEGREVEID 430
BLAST of Sed0001813 vs. TAIR 10
Match:
AT4G24320.1 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 171.0 bits (432), Expect = 2.0e-42
Identity = 111/350 (31.71%), Postives = 172/350 (49.14%), Query Frame = 0
Query: 28 VSQIRSISSLKVIWRKDSKLDEAIENDKRYKLCARVVREVLSEPGQVMPLRYLEKRRQRL 87
+ Q R+ + +V W D LDEA++ +K K + ++S P + +PL L + +
Sbjct: 12 LQQRRTFVNARVKWVSDHYLDEAVQREKNLKQVISLKDRIVSSPSKSLPLSSLSLLKPLV 71
Query: 88 RLNVKIQTFLSRNPGLFDTYYDKIKPKSDPVLFLRSSDRLREFLEEEKRIVVD--NEEVI 147
L++ F + P +F T+ +P L +R + + +EE+ I + V
Sbjct: 72 NLHITAAAFFQKYPSVFTTF----QPSPSHPLHVRLTPQALTLHKEEETIHLSPPQRNVT 131
Query: 148 VSKLCKLLMMSKDNFLSVDKLVHVKRDFGFPNDFLVDLVPKYPEYFQIV----GSPGEGK 207
V +L K LM++ L + L + D G P D++ L+ YPEYF++ GE
Sbjct: 132 VQRLTKFLMLTGAGSLPLYVLDRFRFDLGLPRDYITSLIGDYPEYFEVTEIKDRLTGEKT 191
Query: 208 SFLQLVSRNPNFAKSVIERRAE--DESR-STGVRVRPNFNYNLPPGFFLRKEMREWVRDW 267
L + SR N S +ERR D SR G+R+R ++ N P G+ L K ++ WV W
Sbjct: 192 LALTISSRRNNLPVSEMERREATIDGSRVKKGLRIR--YSMNFPKGYELHKRVKNWVEQW 251
Query: 268 LELDYISPYEDVSHLAQSSPEMEKRTVGVFHELLSLSLFKRIAVPTLGKFSDEYRFSNAF 327
L YISPYE+ HL S + EK V V HELL L + K+ + + F F
Sbjct: 252 QNLPYISPYENAFHLGSYSDQAEKWAVAVLHELLFLLVSKKTETDNVICLGEYLGFGMRF 311
Query: 328 SSAFTRHSGIFYMSLKGGIETAMLREAYKGDQLIDCDPLLEIKDKFVELL 369
A H GIFYMS K +T +LREAY L++ PL+ I+ +++ L+
Sbjct: 312 KKALVHHPGIFYMSHKIRTQTVVLREAYHKVFLLEKHPLMGIRHQYIYLM 355
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7014426.1 | 2.4e-191 | 84.42 | Protein ROOT PRIMORDIUM DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argy... | [more] |
XP_022992526.1 | 2.4e-191 | 83.92 | protein WHAT'S THIS FACTOR 1 homolog [Cucurbita maxima] >XP_022992527.1 protein ... | [more] |
XP_022953521.1 | 4.2e-191 | 84.42 | protein WHAT'S THIS FACTOR 1 homolog [Cucurbita moschata] >XP_022953522.1 protei... | [more] |
KAG6575893.1 | 7.1e-191 | 84.17 | Protein WHAT'S THIS FACTOR 1-like, chloroplastic, partial [Cucurbita argyrosperm... | [more] |
XP_038899043.1 | 8.7e-189 | 84.34 | protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
A0MFS5 | 5.9e-47 | 35.10 | Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3... | [more] |
Q65XL5 | 9.4e-45 | 34.83 | Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japon... | [more] |
B6TTV8 | 1.4e-43 | 34.81 | Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=... | [more] |
Q689D6 | 3.6e-36 | 28.00 | Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1... | [more] |
Q9ZUZ6 | 9.5e-29 | 26.65 | Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=W... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1JZH3 | 1.2e-191 | 83.92 | protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111488826... | [more] |
A0A6J1GN70 | 2.0e-191 | 84.42 | protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC1114560... | [more] |
A0A6J1D830 | 1.0e-187 | 83.12 | protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Momordica charantia OX=3673 GN=LOC1110184... | [more] |
A0A5D3DBW6 | 2.6e-186 | 81.86 | Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5... | [more] |
A0A1S3BS57 | 2.6e-186 | 82.12 | protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103492691 PE=4... | [more] |
Match Name | E-value | Identity | Description | |
AT3G63090.1 | 1.7e-153 | 72.25 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |
AT2G31290.1 | 3.2e-48 | 33.72 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |
AT2G31290.2 | 3.2e-48 | 33.72 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |
AT4G01037.1 | 4.2e-48 | 35.10 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |
AT4G24320.1 | 2.0e-42 | 31.71 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |