Sed0001312 (gene) Chayote v1

Overview
NameSed0001312
Typegene
OrganismSechium edule (Chayote v1)
DescriptionPentatricopeptide repeat-containing protein
LocationLG13: 8315800 .. 8322012 (-)
RNA-Seq ExpressionSed0001312
SyntenySed0001312
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAAACAAAAACAAAAAAAATAAAAATAAAAAATAGGGTAGCTTTCTTCTTCTTCACCCTTTCCCGCCGCCCATTGTCCCCTCCGCCGATGTTCCATTTCTTCGGCGACAACTTCAGCGCCGGCGACGTCGACGTCGACGGTGAGAGTTCAGGCAACATTGTTCCAATACGACCTCTCTTTCCCAACATCCCTTCTTCTTCTTCCTTGACCTCGTCTCGCGAGGTATATATTCTTGACTTGGCGCAATTCAAAACACTCTTGTTCTCAAACTAGCAACTTCTTGAATCGATTTTGGTAAGTTTTAGATGGATATTTCTTTCCAAACCCTTTCGAATCCAATTACCACATATTCCTAACTCTTGGAACTCTTTGTTTGTAGTTTCCAACTTATTCGGCCACTTCCAACACTTACCTTGTTCCTTATGGTTAAGATCAATAGGTAATACTACTTTTCTGTTTTGGGTCTACTTCTATTGATATTTATCTAGGAGCAGTGCAAGTAAGTAGAATTCTACTTGGTTTGGTATGTGTGTCTATCTGCAAAAAGCATGTTGTGTTTCTTGTGCTAGATATGCATTTGTGAACTGAGGTGATTGTTGTTGAACTCAGTGATTTATTATGGAGTTTTGTGATGATTAGTTTGATGTGAATGGATCCACTTTCTTTAGAGAATTGTATTGTAGACCTGAGATTCTTGAAAATGCATGTGGGATGAGCCTGTGTGGCCCTGTGTTGTGAGCATGACTATTAGTTTGGTATGAATATATGGTTTAGTTGCTCATTGTGTGGGGCTTTATATACTAGTTAAGGCAAGGAAAGGTGCATACCATGTGCCTCGGACATAAATAGTTGGGGGTGGGATTGTCACCATTGGATTACGAGAGGTATCGGTTGCAATGGATAAAATGGTCATGGGGCAATGCCCATATACGTGTTATATCTTTGAATGCCTTGGGTACAGCAAATGATGAAGGGGCAATGTGCAGACATGTTGAACCATTTGGGTACCTTCAGCACTAACATGTTGAATCATCAAGAAATGGCTTGAGTGGCGATGTACACTTGTGTTTGAGTTAACAACTGCATGGGGTATCACCAGTACTTAAAGGGTGGGTGACACATAGTTTGACGTTCTTAATCATGGACGGATTAGCGAGTACCATAAAAGATGAGTTTATTAGGATTAAGTAAAACTTGCATAGCATGGTGTGAGAACCCACGTGTGGAATTGGTTGTTGTTTACTTTTCCTTGCATGCAGAACACAATATTCATTGTGATTCATTGATAATTTTGTTGATTGGGCATGAAGTATATGCTGTTTTGTTGCTTGATGGTTGGTGGCTCACCATATGTGGGTTACTTACTCAGTACGTGTTATGTACTGATCTACCAATAGATCTTGTATTGTAGGTGATGAGTACTACAAACCGGGTGATGATCACTAGGCGAAATGAAGGAGTGTCATTGGCCATTATTTTTAGTAGTTTCTTTTGAGTTAACAGATAGGATTTATCTTTCTCAAATTCTTGTTGTATAGGTTACTTGTTTTAAACTAAGGTGGTTTCTGGCTAGTGAGTTTAATAAAGAGTATGGAGCCTATTTGTGATGGAACCTACTTTGTGATGATTTTCTTGTAATTTCATATCATTAATGAAATTGTTTCTTATAAAAAAAAAAAAAGAGTTTAATAAAGAGTAGTTGTTTGTTTCAAGTCGCAACTAGGATCATTTTGCTAAAATTTGCTTCCTTGATTAAATGAATTTCATGTAAAGTTTAAACTTGATTCCTAGTATCTTACTTGTACCATATGCCGTGCGGTAATCTTGAGTTTATGTTTTTCAAACTGCAAGGATGGGCTCGACATTGTTTTGCGAGGAGTAGAGTGATCTGGCCTAGAAGTGCTTAAACTTGACAACTTTAGTTGACTAGTCTGATAACGCAGCAGTAGTTATTGAATGGGATTCAGAATTAGATGCCTTGTACAAGTATTGGGGTGCCGTTCACCAACTAAGAGTTAAGAGGAGAAATCGTCTTTCTTTTATTGTTCTCATGTGAATATCACTAAATTGACTTGAGCTTATTATTGAGTTTTTTTAATTTTGGAATTTTCATTTTTTGCAACTTTGAAGATGAAAGTATGTATGCTTGATGGAATTGTTAGTATTGTTGGTGGATATTTGCTAATTTTGACGATAGGTGTTCTACCTACATTGCTAATCTTATTTCGGATTCTTAAATTGCCAGGTTTTCTTCAATGGCGCCTTCTCAAGTTTGGTTTTTCTTCTTCAATCTTCAACGTTATGATACATCCCTATTGCCCCTTATATCTCAGTCGAATCCTCATTTCTTCAGTTAATTACTACTCTACCCCCCTGCAACTTCTACTCATACCATTCCTCTCATGTCCTTCCTGAAACAATGCAGGACGTTGATCAGTGCAAAGCTTGCTCACCAGCAAATTTTGGTTAATGGTTTCACCGATTTGATTACATACGCTGTTGGAGGCTACATCGAGTGCGGTGCATTTGCACAAGCTGTATTACTCCTCGAACGTCTCATTCCATCGCATTCCACTGTTTTTTGGTGGAATGCACTAATTCGACGCTCTGTGAGACTTGTTCTCCTTGATGATGCATTGGGTTATTATTGTCAGATGCAGAGACTTGGGTGTTCGCCTGACCATTACACCTTTCCTTTTATTCTCAAAGCTTGTGGTGAGATACCATCGTTTCGATGGGGTGCTTCAGTTCATGCCATAGTTTGTGCTTCTGGGTTTCAGTCAAATGTATTTATTTGTAATTCGATGGTGGCGATGTATGGGAGATGTGGGGCATTGGATGATGCACGCCAAGTGTTTGATGAGGTACTTGAAAGAAAGATAGAGGACATTGTATCTTGGAATTCGATTCTTGCTGCTTATGTGCAAGGTGGGAAGTCAAAAACTGCCCTCAAAATTGCCTTTCAAATGGCTAAGCACTACAGTTTCGAACTTCGCCCGGATGCTATAACACTTGTCAATATTCTTCCTGCATGTGCATCAACATTTGCATCACAACATGGTAGGCAGGTACATGGATTTGCAGTTCGGAGTGGATTGGGGGATGATGTGTTTGTAGGCAATGCTCTTGTGGATATGTATGCTAAATGCTCGAAGATGACTGAGGCTAACAAGGTGTTTGAACATATGAAGGAGAAGGATGTGGTTTCCTGGAATGCCATAGTCACTGGGTATTCTCAGATTGGGAGATTTGATGACGCTCTCGCGTTGTTTCAAAGGATGCAAGAGGAAGATATTGAGTTAAATGTGGTAACGTGGAGTGCTGTGATTGCTGGCTATGCTCAAAGGGGGCATGGTTTTGAAGCCCTTGATGTATTCAGGCAAATGCAGCTTTGTGGATTGGAGCCAAATGTTATTACTCTCGTGTCTCTTCTTTCAGGTTGTGCTTCTGTCGGAGCATTGCTTCATGGAAAGCAAACACATGCATATGCCATAAAAAATATTCTCAAATTGGAACGGAGTGATTTGGGAGATGACTTGATGGTTATTAATGGTCTAATTGATATGTATGCTAAATGCAAAAGCTCTAAAGTTGCTCGCAATATTTTTGACCTTATAACAGGAAAAGACAAGAATGTGGTGACTTGGACTGTCATGATTGGTGGATATGCTCAACATGGCGAAGCCAATGATGCGATAGAACTTTTCTCTCAAATGTTTAAACAGGAGTGCTCTTTAAAGCCTAATGCCTTCACTCTATCTTGTGCCTTGATGGCCTGTGCACGTTTGGGCGCACTAAGGCTTGGAAGACAAATACATGCCTATGCTTTGCGCCATGAAAATGAGTCCGAGGTTTTATATGTAGCTAATTGCCTTATAGATATGTATTCCAAATCAGGGGACATTGATGCTGCTCAGATTGTGTTTGACAACATGAAGATACAAAATGCTGTATCTTGGACTTCTTTGATGACAGGTTATGGTATTCATGGTCGTGGTGAAGAAGCTCTACAAGTTTTTAATCAGATGCGGCAAGTTGGTCTTGCAGTTGATGGGGTAACCTTTCTTGTCGTTCTTTATGCGTGTAGCCACTCAGGAATGGTGGATCAAGGCATGAACTACTTCCATGGTATGGCCAAGAACTTTGGGGTTGTCCCTGGAGCCGAACATTATGCATGTATGGTTGATCTCTTAGGCCGCGCAGGTCGTCTCGATGAAGCAATGGAACTCATTGAAAGCATGCCAATGGAGCCAACCCAAGTTGTATGGGTTGCACTACTAAGTTCTAGTAGAACTCATGCAAATGTTGAGCTTGGGGAATATGCAGCAAGCAAATTGATAGAATCTGGGTTGGAGAATGACGGTTCATACACATTGCTTTCAAACTTATATGCGAATGCACGTCGTTGGAAAGATGTAGCTAGAATCAGATCATTGATGAAGCATACTGGGATCAGGAAGAGGCCTGGATGTAGTTGGGTACAAGGAAAGAAAAGCACTACGACTTTCTTTGTGGGCGATAAAAGTCATCCACAATCAGACCAAATATACAACATTCTTGGTGACTTGATTCAACGCATCAAAGACATGGGGTATATTCCACAAACGAGCTTTGCTCTTCATGATGTTGATGATGAAGAGAAAGGCGATCTCTTGTTTGAGCATAGCGAGAAGTTGGCTGTTGCATATGGGATTTTAACATCAGCTCCAGGACAGCCCATTCATATAAGCAAGAACTTGCGCATATGTGGTGATTGTCACAGTGCCTTAACCTACATTTCCATGATTATTGAACACGAGATTATATTGAGAGATTCCAGTAGGTTTCATCATTTCAAGAAAGGCTCCTGCTCTTGTAGAGGCTATTGGTGATGGACAAATTGAACCAAGTATGTGATGTAGTTGTTTTATGTGATTTGTATTAGTTCATATGATTACAATTTCATAAGTTAGCATCACTTAAGAGTAGTCCAATGTTAGTCTTCTCAAATTCAAATTTATTACATTCATTTGTAACGCAATACTTCGAGTAACAAGAAGATATATACTGCCTTTTGGTCGTATCATAGTTTTAGCAATTCTTTTATAACAACCCTTTTTCTCTTATTGTTAATGATTGGATAGTTCCTTATAAATAGCCCCTGGTGCTCTTTCGGTTGTCTGTCCTTTTGGTCGTTCGGGAAAGATCACTGGGATTGGATTACCTGTTCCGTCTGGTTTTGTGAGTAACAAAATTACTATGTTTGGGACTGCAATAAGGTATTTCGTGATGAAGCCAAAGCCGGAAATGAAGCTGACAGAGCTTTAAACTCCACTGGAGCGAACACATGGTCACCAGAGTCATCTTCGACATTGTTAAGGAGTATGGTCCACTAACCAGTCGAAACTTGGGACTGAGTTCAGGTAACCACTCTGTTCTGTCGTTTATATGTTTTGCTTCAAATTTAATCCACTTCTTCATTTTCTTTATCTCATTCCCCATTAACATTGGGGATGATTGATGAATAGCTTTTAGTTTTGAGTTGTTTACTGTATTGAACAGTGTAAATTTAGCATAATAGCTCAACTAGATCGAGAAATGCCACAGTTCTGAATTCGTTCTTGTAAATGAACTGATAAGTGTATTCCTTTCCAGGTGGTTTGATTGAGAAGATTAACAAGCAAAAGGCACATGAAAATAGTTATGGGCATGCAATCACGTAGGACTTGATAAGCACTTTGTTTACACCACAACCTGGTTCGTCAAACCCAACTTCGGACCGATAAAGCAACAGGCGCGCAATTTTTCCCGACCGAAAAGCCCTTGATTGTCTACCAACAACTCGTACGCCTGCATTGTTTCTTTCTTTTGAATGGAAGCTGTTCCTTGTTTATTCCAACTGATATTGTTAAACGATCATCATCGTATACATGATGTGCTAGACTCCGAAGTCTAATAATCTATCGTCTATCCCAATGTTTCAAAAGGCTCCAGGGCGTGCCTAGTTGTATTGAGGCTTAAGGCACAAGTGCAGCATCTTGTCTTGCATCTTGATCGCCTCAAACTGAAATGACTGTCAAATGTTTTTATCCTTTCTGAAACAAATTTCAATGCTTAAATTAGTGTAGATGGAAAAAGGGTTCTACTGCTGTATAAGTTCTTTACTTGCAAGAGCAAGGAGTTGGAGACACCACTATTTGGGATATTACACATTTCTAGACTGCTATCAC

mRNA sequence

AAAAAAAACAAAAACAAAAAAAATAAAAATAAAAAATAGGGTAGCTTTCTTCTTCTTCACCCTTTCCCGCCGCCCATTGTCCCCTCCGCCGATGTTCCATTTCTTCGGCGACAACTTCAGCGCCGGCGACGTCGACGTCGACGGTGAGAGTTCAGGCAACATTGTTCCAATACGACCTCTCTTTCCCAACATCCCTTCTTCTTCTTCCTTGACCTCGTCTCGCGAGGTATATATTCTTGACTTGGCGCAATTCAAAACACTCTTGTTCTCAAACTAGCAACTTCTTGAATCGATTTTGTTTCCAACTTATTCGGCCACTTCCAACACTTACCTTGTTCCTTATGGTTAAGATCAATAGGATGGGCTCGACATTGTTTTGCGAGGAGTAGAGTGATCTGGCCTAGAAGTGCTTAAACTTGACAACTTTAGTTGACTAGTCTGATAACGCAGCAGTAGTTATTGAATGGGATTCAGAATTAGATGCCTTGTACAAGTATTGGGGTGCCGTTCACCAACTAAGAGTTTTCTTCAATGGCGCCTTCTCAAGTTTGGTTTTTCTTCTTCAATCTTCAACGTTATGATACATCCCTATTGCCCCTTATATCTCAGTCGAATCCTCATTTCTTCAGTTAATTACTACTCTACCCCCCTGCAACTTCTACTCATACCATTCCTCTCATGTCCTTCCTGAAACAATGCAGGACGTTGATCAGTGCAAAGCTTGCTCACCAGCAAATTTTGGTTAATGGTTTCACCGATTTGATTACATACGCTGTTGGAGGCTACATCGAGTGCGGTGCATTTGCACAAGCTGTATTACTCCTCGAACGTCTCATTCCATCGCATTCCACTGTTTTTTGGTGGAATGCACTAATTCGACGCTCTGTGAGACTTGTTCTCCTTGATGATGCATTGGGTTATTATTGTCAGATGCAGAGACTTGGGTGTTCGCCTGACCATTACACCTTTCCTTTTATTCTCAAAGCTTGTGGTGAGATACCATCGTTTCGATGGGGTGCTTCAGTTCATGCCATAGTTTGTGCTTCTGGGTTTCAGTCAAATGTATTTATTTGTAATTCGATGGTGGCGATGTATGGGAGATGTGGGGCATTGGATGATGCACGCCAAGTGTTTGATGAGGTACTTGAAAGAAAGATAGAGGACATTGTATCTTGGAATTCGATTCTTGCTGCTTATGTGCAAGGTGGGAAGTCAAAAACTGCCCTCAAAATTGCCTTTCAAATGGCTAAGCACTACAGTTTCGAACTTCGCCCGGATGCTATAACACTTGTCAATATTCTTCCTGCATGTGCATCAACATTTGCATCACAACATGGTAGGCAGGTACATGGATTTGCAGTTCGGAGTGGATTGGGGGATGATGTGTTTGTAGGCAATGCTCTTGTGGATATGTATGCTAAATGCTCGAAGATGACTGAGGCTAACAAGGTGTTTGAACATATGAAGGAGAAGGATGTGGTTTCCTGGAATGCCATAGTCACTGGGTATTCTCAGATTGGGAGATTTGATGACGCTCTCGCGTTGTTTCAAAGGATGCAAGAGGAAGATATTGAGTTAAATGTGGTAACGTGGAGTGCTGTGATTGCTGGCTATGCTCAAAGGGGGCATGGTTTTGAAGCCCTTGATGTATTCAGGCAAATGCAGCTTTGTGGATTGGAGCCAAATGTTATTACTCTCGTGTCTCTTCTTTCAGGTTGTGCTTCTGTCGGAGCATTGCTTCATGGAAAGCAAACACATGCATATGCCATAAAAAATATTCTCAAATTGGAACGGAGTGATTTGGGAGATGACTTGATGGTTATTAATGGTCTAATTGATATGTATGCTAAATGCAAAAGCTCTAAAGTTGCTCGCAATATTTTTGACCTTATAACAGGAAAAGACAAGAATGTGGTGACTTGGACTGTCATGATTGGTGGATATGCTCAACATGGCGAAGCCAATGATGCGATAGAACTTTTCTCTCAAATGTTTAAACAGGAGTGCTCTTTAAAGCCTAATGCCTTCACTCTATCTTGTGCCTTGATGGCCTGTGCACGTTTGGGCGCACTAAGGCTTGGAAGACAAATACATGCCTATGCTTTGCGCCATGAAAATGAGTCCGAGGTTTTATATGTAGCTAATTGCCTTATAGATATGTATTCCAAATCAGGGGACATTGATGCTGCTCAGATTGTGTTTGACAACATGAAGATACAAAATGCTGTATCTTGGACTTCTTTGATGACAGGTTATGGTATTCATGGTCGTGGTGAAGAAGCTCTACAAGTTTTTAATCAGATGCGGCAAGTTGGTCTTGCAGTTGATGGGGTAACCTTTCTTGTCGTTCTTTATGCGTGTAGCCACTCAGGAATGGTGGATCAAGGCATGAACTACTTCCATGGTATGGCCAAGAACTTTGGGGTTGTCCCTGGAGCCGAACATTATGCATGTATGGTTGATCTCTTAGGCCGCGCAGGTCGTCTCGATGAAGCAATGGAACTCATTGAAAGCATGCCAATGGAGCCAACCCAAGTTGTATGGGTTGCACTACTAAGTTCTAGTAGAACTCATGCAAATGTTGAGCTTGGGGAATATGCAGCAAGCAAATTGATAGAATCTGGGTTGGAGAATGACGGTTCATACACATTGCTTTCAAACTTATATGCGAATGCACGTCGTTGGAAAGATGTAGCTAGAATCAGATCATTGATGAAGCATACTGGGATCAGGAAGAGGCCTGGATGTAGTTGGGTACAAGGAAAGAAAAGCACTACGACTTTCTTTGTGGGCGATAAAAGTCATCCACAATCAGACCAAATATACAACATTCTTGGTGACTTGATTCAACGCATCAAAGACATGGGGTATATTCCACAAACGAGCTTTGCTCTTCATGATGTTGATGATGAAGAGAAAGGCGATCTCTTGTTTGAGCATAGCGAGAAGTTGGCTGTTGCATATGGGATTTTAACATCAGCTCCAGGACAGCCCATTCATATAAGCAAGAACTTGCGCATATGTGGTGATTGTCACAGTGCCTTAACCTACATTTCCATGATTATTGAACACGAGATTATATTGAGAGATTCCAGTAGGTTTCATCATTTCAAGAAAGGCTCCTGCTCTTGTAGAGGCTATTGGTGATGGACAAATTGAACCAAGTATTTCGTGATGAAGCCAAAGCCGGAAATGAAGCTGACAGAGCTTTAAACTCCACTGGAGCGAACACATGGTCACCAGAGTCATCTTCGACATTGTTAAGGAGTATGGTCCACTAACCAGTCGAAACTTGGGACTGAGTTCAGGTGGTTTGATTGAGAAGATTAACAAGCAAAAGGCACATGAAAATAGTTATGGGCATGCAATCACGTAGGACTTGATAAGCACTTTGTTTACACCACAACCTGGTTCGTCAAACCCAACTTCGGACCGATAAAGCAACAGGCGCGCAATTTTTCCCGACCGAAAAGCCCTTGATTGTCTACCAACAACTCGTACGCCTGCATTGTTTCTTTCTTTTGAATGGAAGCTGTTCCTTGTTTATTCCAACTGATATTGTTAAACGATCATCATCGTATACATGATGTGCTAGACTCCGAAGTCTAATAATCTATCGTCTATCCCAATGTTTCAAAAGGCTCCAGGGCGTGCCTAGTTGTATTGAGGCTTAAGGCACAAGTGCAGCATCTTGTCTTGCATCTTGATCGCCTCAAACTGAAATGACTGTCAAATGTTTTTATCCTTTCTGAAACAAATTTCAATGCTTAAATTAGTGTAGATGGAAAAAGGGTTCTACTGCTGTATAAGTTCTTTACTTGCAAGAGCAAGGAGTTGGAGACACCACTATTTGGGATATTACACATTTCTAGACTGCTATCAC

Coding sequence (CDS)

ATGTCCTTCCTGAAACAATGCAGGACGTTGATCAGTGCAAAGCTTGCTCACCAGCAAATTTTGGTTAATGGTTTCACCGATTTGATTACATACGCTGTTGGAGGCTACATCGAGTGCGGTGCATTTGCACAAGCTGTATTACTCCTCGAACGTCTCATTCCATCGCATTCCACTGTTTTTTGGTGGAATGCACTAATTCGACGCTCTGTGAGACTTGTTCTCCTTGATGATGCATTGGGTTATTATTGTCAGATGCAGAGACTTGGGTGTTCGCCTGACCATTACACCTTTCCTTTTATTCTCAAAGCTTGTGGTGAGATACCATCGTTTCGATGGGGTGCTTCAGTTCATGCCATAGTTTGTGCTTCTGGGTTTCAGTCAAATGTATTTATTTGTAATTCGATGGTGGCGATGTATGGGAGATGTGGGGCATTGGATGATGCACGCCAAGTGTTTGATGAGGTACTTGAAAGAAAGATAGAGGACATTGTATCTTGGAATTCGATTCTTGCTGCTTATGTGCAAGGTGGGAAGTCAAAAACTGCCCTCAAAATTGCCTTTCAAATGGCTAAGCACTACAGTTTCGAACTTCGCCCGGATGCTATAACACTTGTCAATATTCTTCCTGCATGTGCATCAACATTTGCATCACAACATGGTAGGCAGGTACATGGATTTGCAGTTCGGAGTGGATTGGGGGATGATGTGTTTGTAGGCAATGCTCTTGTGGATATGTATGCTAAATGCTCGAAGATGACTGAGGCTAACAAGGTGTTTGAACATATGAAGGAGAAGGATGTGGTTTCCTGGAATGCCATAGTCACTGGGTATTCTCAGATTGGGAGATTTGATGACGCTCTCGCGTTGTTTCAAAGGATGCAAGAGGAAGATATTGAGTTAAATGTGGTAACGTGGAGTGCTGTGATTGCTGGCTATGCTCAAAGGGGGCATGGTTTTGAAGCCCTTGATGTATTCAGGCAAATGCAGCTTTGTGGATTGGAGCCAAATGTTATTACTCTCGTGTCTCTTCTTTCAGGTTGTGCTTCTGTCGGAGCATTGCTTCATGGAAAGCAAACACATGCATATGCCATAAAAAATATTCTCAAATTGGAACGGAGTGATTTGGGAGATGACTTGATGGTTATTAATGGTCTAATTGATATGTATGCTAAATGCAAAAGCTCTAAAGTTGCTCGCAATATTTTTGACCTTATAACAGGAAAAGACAAGAATGTGGTGACTTGGACTGTCATGATTGGTGGATATGCTCAACATGGCGAAGCCAATGATGCGATAGAACTTTTCTCTCAAATGTTTAAACAGGAGTGCTCTTTAAAGCCTAATGCCTTCACTCTATCTTGTGCCTTGATGGCCTGTGCACGTTTGGGCGCACTAAGGCTTGGAAGACAAATACATGCCTATGCTTTGCGCCATGAAAATGAGTCCGAGGTTTTATATGTAGCTAATTGCCTTATAGATATGTATTCCAAATCAGGGGACATTGATGCTGCTCAGATTGTGTTTGACAACATGAAGATACAAAATGCTGTATCTTGGACTTCTTTGATGACAGGTTATGGTATTCATGGTCGTGGTGAAGAAGCTCTACAAGTTTTTAATCAGATGCGGCAAGTTGGTCTTGCAGTTGATGGGGTAACCTTTCTTGTCGTTCTTTATGCGTGTAGCCACTCAGGAATGGTGGATCAAGGCATGAACTACTTCCATGGTATGGCCAAGAACTTTGGGGTTGTCCCTGGAGCCGAACATTATGCATGTATGGTTGATCTCTTAGGCCGCGCAGGTCGTCTCGATGAAGCAATGGAACTCATTGAAAGCATGCCAATGGAGCCAACCCAAGTTGTATGGGTTGCACTACTAAGTTCTAGTAGAACTCATGCAAATGTTGAGCTTGGGGAATATGCAGCAAGCAAATTGATAGAATCTGGGTTGGAGAATGACGGTTCATACACATTGCTTTCAAACTTATATGCGAATGCACGTCGTTGGAAAGATGTAGCTAGAATCAGATCATTGATGAAGCATACTGGGATCAGGAAGAGGCCTGGATGTAGTTGGGTACAAGGAAAGAAAAGCACTACGACTTTCTTTGTGGGCGATAAAAGTCATCCACAATCAGACCAAATATACAACATTCTTGGTGACTTGATTCAACGCATCAAAGACATGGGGTATATTCCACAAACGAGCTTTGCTCTTCATGATGTTGATGATGAAGAGAAAGGCGATCTCTTGTTTGAGCATAGCGAGAAGTTGGCTGTTGCATATGGGATTTTAACATCAGCTCCAGGACAGCCCATTCATATAAGCAAGAACTTGCGCATATGTGGTGATTGTCACAGTGCCTTAACCTACATTTCCATGATTATTGAACACGAGATTATATTGAGAGATTCCAGTAGGTTTCATCATTTCAAGAAAGGCTCCTGCTCTTGTAGAGGCTATTGGTGA

Protein sequence

MSFLKQCRTLISAKLAHQQILVNGFTDLITYAVGGYIECGAFAQAVLLLERLIPSHSTVFWWNALIRRSVRLVLLDDALGYYCQMQRLGCSPDHYTFPFILKACGEIPSFRWGASVHAIVCASGFQSNVFICNSMVAMYGRCGALDDARQVFDEVLERKIEDIVSWNSILAAYVQGGKSKTALKIAFQMAKHYSFELRPDAITLVNILPACASTFASQHGRQVHGFAVRSGLGDDVFVGNALVDMYAKCSKMTEANKVFEHMKEKDVVSWNAIVTGYSQIGRFDDALALFQRMQEEDIELNVVTWSAVIAGYAQRGHGFEALDVFRQMQLCGLEPNVITLVSLLSGCASVGALLHGKQTHAYAIKNILKLERSDLGDDLMVINGLIDMYAKCKSSKVARNIFDLITGKDKNVVTWTVMIGGYAQHGEANDAIELFSQMFKQECSLKPNAFTLSCALMACARLGALRLGRQIHAYALRHENESEVLYVANCLIDMYSKSGDIDAAQIVFDNMKIQNAVSWTSLMTGYGIHGRGEEALQVFNQMRQVGLAVDGVTFLVVLYACSHSGMVDQGMNYFHGMAKNFGVVPGAEHYACMVDLLGRAGRLDEAMELIESMPMEPTQVVWVALLSSSRTHANVELGEYAASKLIESGLENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILGDLIQRIKDMGYIPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIHISKNLRICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW
Homology
BLAST of Sed0001312 vs. NCBI nr
Match: XP_022960463.1 (pentatricopeptide repeat-containing protein At5g16860 [Cucurbita moschata])

HSP 1 Score: 1531.5 bits (3964), Expect = 0.0e+00
Identity = 746/822 (90.75%), Postives = 784/822 (95.38%), Query Frame = 0

Query: 1   MSFLKQCRTLISAKLAHQQILVNGFTDLITYAVGGYIECGAFAQAVLLLERLIPSHSTVF 60
           MSFLKQCRTLI AKL HQQILVNGFTDL+T+A+GGYIEC AF QAV LLERL+PSHSTVF
Sbjct: 1   MSFLKQCRTLIDAKLVHQQILVNGFTDLVTHAIGGYIECNAFGQAVSLLERLVPSHSTVF 60

Query: 61  WWNALIRRSVRLVLLDDALGYYCQMQRLGCSPDHYTFPFILKACGEIPSFRWGASVHAIV 120
           WWNALIRRSVRL  LDDAL +Y QMQRLG  PDHYTFPF+LKACGE  SFR G SVHA+V
Sbjct: 61  WWNALIRRSVRLGFLDDALCFYRQMQRLGWWPDHYTFPFVLKACGEKLSFRCGTSVHAMV 120

Query: 121 CASGFQSNVFICNSMVAMYGRCGALDDARQVFDEVLERKIEDIVSWNSILAAYVQGGKSK 180
           CA GF+SNVFICNS+VAMYGRCGALDDARQVFDEVLERKI+DIVSWNSILAAYVQGG+SK
Sbjct: 121 CAYGFESNVFICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQGGESK 180

Query: 181 TALKIAFQMAKHYSFELRPDAITLVNILPACASTFASQHGRQVHGFAVRSGLGDDVFVGN 240
            AL+IAFQMAKHY+F+LRPDAITLVN+LPACASTFA+QHGRQVHGFAVRSGL DDVFVGN
Sbjct: 181 AALRIAFQMAKHYNFKLRPDAITLVNVLPACASTFATQHGRQVHGFAVRSGLVDDVFVGN 240

Query: 241 ALVDMYAKCSKMTEANKVFEHMKEKDVVSWNAIVTGYSQIGRFDDALALFQRMQEEDIEL 300
           ALVDMYAKCSKM EANKVFE MKEKDVVSWNA+VTGYSQIG FDDAL+LF+RMQEEDIEL
Sbjct: 241 ALVDMYAKCSKMNEANKVFEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQEEDIEL 300

Query: 301 NVVTWSAVIAGYAQRGHGFEALDVFRQMQLCGLEPNVITLVSLLSGCASVGALLHGKQTH 360
           NVVTWSAVIAGY+QRGHG EALDVFRQMQ CGLEPNV+TLVSLLSGCASVGALLHGKQTH
Sbjct: 301 NVVTWSAVIAGYSQRGHGCEALDVFRQMQHCGLEPNVVTLVSLLSGCASVGALLHGKQTH 360

Query: 361 AYAIKNILKLERSDLGDDLMVINGLIDMYAKCKSSKVARNIFDLITGKDKNVVTWTVMIG 420
           AYAIKNIL L+ SD GDD+MV NGLIDMYAKCKSS+VARNIFD I GKDKNVVTWTVMIG
Sbjct: 361 AYAIKNILNLDWSDPGDDMMVFNGLIDMYAKCKSSRVARNIFDSIIGKDKNVVTWTVMIG 420

Query: 421 GYAQHGEANDAIELFSQMFKQECSLKPNAFTLSCALMACARLGALRLGRQIHAYALRHEN 480
           GYAQHGEANDA+ELFSQMFKQE SLKPNAFTLSCALMACARLGALRLG+QIHAYALRHEN
Sbjct: 421 GYAQHGEANDAVELFSQMFKQETSLKPNAFTLSCALMACARLGALRLGKQIHAYALRHEN 480

Query: 481 ESEVLYVANCLIDMYSKSGDIDAAQIVFDNMKIQNAVSWTSLMTGYGIHGRGEEALQVFN 540
           ESEVL+VANCLIDMYSKSGDIDAAQIVFDNMK++NAVSWTSLMTGYGIHGRGEEAL+VFN
Sbjct: 481 ESEVLHVANCLIDMYSKSGDIDAAQIVFDNMKVRNAVSWTSLMTGYGIHGRGEEALRVFN 540

Query: 541 QMRQVGLAVDGVTFLVVLYACSHSGMVDQGMNYFHGMAKNFGVVPGAEHYACMVDLLGRA 600
           QMRQVGL+VDGVTFLVVLYACSHSGMVDQGMNYFHGM K FGV PGAEHYACMVDLLGRA
Sbjct: 541 QMRQVGLSVDGVTFLVVLYACSHSGMVDQGMNYFHGMVKYFGVAPGAEHYACMVDLLGRA 600

Query: 601 GRLDEAMELIESMPMEPTQVVWVALLSSSRTHANVELGEYAASKLIESGLENDGSYTLLS 660
           GRL+EAMELI+SMPMEPT VVWVALLS+SRTHANVELGEYAASKL+ESG ENDGSYTLLS
Sbjct: 601 GRLNEAMELIKSMPMEPTPVVWVALLSASRTHANVELGEYAASKLMESGAENDGSYTLLS 660

Query: 661 NLYANARRWKDVARIRSLMKHTGIRKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILG 720
           NLYANARRWKDVARIR LMKHTGI+KRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNIL 
Sbjct: 661 NLYANARRWKDVARIRRLMKHTGIKKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILS 720

Query: 721 DLIQRIKDMGYIPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIHISKNLR 780
           DLIQRIKDMGY+PQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPI I+KNLR
Sbjct: 721 DLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRINKNLR 780

Query: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 823
           ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW
Sbjct: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 822

BLAST of Sed0001312 vs. NCBI nr
Match: XP_023514147.1 (pentatricopeptide repeat-containing protein At5g16860 [Cucurbita pepo subsp. pepo] >XP_023514148.1 pentatricopeptide repeat-containing protein At5g16860 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1531.5 bits (3964), Expect = 0.0e+00
Identity = 746/822 (90.75%), Postives = 783/822 (95.26%), Query Frame = 0

Query: 1   MSFLKQCRTLISAKLAHQQILVNGFTDLITYAVGGYIECGAFAQAVLLLERLIPSHSTVF 60
           MSFLKQCRTLI AKL HQQILVNGFTDL+T+A+GGYIEC AF QAV LLERL+PSHSTVF
Sbjct: 1   MSFLKQCRTLIDAKLVHQQILVNGFTDLVTHAIGGYIECNAFGQAVSLLERLVPSHSTVF 60

Query: 61  WWNALIRRSVRLVLLDDALGYYCQMQRLGCSPDHYTFPFILKACGEIPSFRWGASVHAIV 120
           WWNALIRRSVRL  LDD+L +Y QMQRLG  PDHYTFPF+LKACGE  SFR G SVHA+V
Sbjct: 61  WWNALIRRSVRLGFLDDSLCFYRQMQRLGWLPDHYTFPFVLKACGEKLSFRCGTSVHAMV 120

Query: 121 CASGFQSNVFICNSMVAMYGRCGALDDARQVFDEVLERKIEDIVSWNSILAAYVQGGKSK 180
           CA GF+SNVFICNS+VAMYGRCGALDDARQVFDEVLERKI+DIVSWNSILAAYVQGG+SK
Sbjct: 121 CAYGFESNVFICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQGGESK 180

Query: 181 TALKIAFQMAKHYSFELRPDAITLVNILPACASTFASQHGRQVHGFAVRSGLGDDVFVGN 240
            AL+IAFQMAKHY+F LRPDAITLVN+LPACASTFA+QHGRQVHGFAVRSGL DDVFVGN
Sbjct: 181 AALRIAFQMAKHYNFRLRPDAITLVNVLPACASTFATQHGRQVHGFAVRSGLVDDVFVGN 240

Query: 241 ALVDMYAKCSKMTEANKVFEHMKEKDVVSWNAIVTGYSQIGRFDDALALFQRMQEEDIEL 300
           ALVDMYAKCSKM EANKVFE MKEKDVVSWNA+VTGYSQIG FDDAL+LF+RMQEEDIEL
Sbjct: 241 ALVDMYAKCSKMNEANKVFEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQEEDIEL 300

Query: 301 NVVTWSAVIAGYAQRGHGFEALDVFRQMQLCGLEPNVITLVSLLSGCASVGALLHGKQTH 360
           NVVTWSAVIAGY+QRGHG EALDVFRQMQ CGLEPNV+TLVSLLSGCASVGALLHGKQTH
Sbjct: 301 NVVTWSAVIAGYSQRGHGCEALDVFRQMQHCGLEPNVVTLVSLLSGCASVGALLHGKQTH 360

Query: 361 AYAIKNILKLERSDLGDDLMVINGLIDMYAKCKSSKVARNIFDLITGKDKNVVTWTVMIG 420
           AYAIKNIL L+ SD GDD+MV NGLIDMYAKCKSS+VARNIFD I GKDKNVVTWTVMIG
Sbjct: 361 AYAIKNILNLDWSDPGDDMMVFNGLIDMYAKCKSSRVARNIFDSIIGKDKNVVTWTVMIG 420

Query: 421 GYAQHGEANDAIELFSQMFKQECSLKPNAFTLSCALMACARLGALRLGRQIHAYALRHEN 480
           GYAQHGEANDA+ELFSQMFKQE SLKPNAFTLSCALMACARLGALRLG+QIHAYALRHEN
Sbjct: 421 GYAQHGEANDAVELFSQMFKQETSLKPNAFTLSCALMACARLGALRLGKQIHAYALRHEN 480

Query: 481 ESEVLYVANCLIDMYSKSGDIDAAQIVFDNMKIQNAVSWTSLMTGYGIHGRGEEALQVFN 540
           ESEVL+VANCLIDMYSKSGDIDAAQIVFDNMK++NAVSWTSLMTGYGIHGRGEEAL+VFN
Sbjct: 481 ESEVLHVANCLIDMYSKSGDIDAAQIVFDNMKVRNAVSWTSLMTGYGIHGRGEEALRVFN 540

Query: 541 QMRQVGLAVDGVTFLVVLYACSHSGMVDQGMNYFHGMAKNFGVVPGAEHYACMVDLLGRA 600
           QMRQVGL+VDGVTFLVVLYACSHSGMVDQGMNYFHGM K FGV PGAEHYACMVDLLGRA
Sbjct: 541 QMRQVGLSVDGVTFLVVLYACSHSGMVDQGMNYFHGMVKYFGVAPGAEHYACMVDLLGRA 600

Query: 601 GRLDEAMELIESMPMEPTQVVWVALLSSSRTHANVELGEYAASKLIESGLENDGSYTLLS 660
           GRL+EAMELI+SMPMEPT VVWVALLS+SRTHANVELGEYAASKLIESG ENDGSYTLLS
Sbjct: 601 GRLNEAMELIKSMPMEPTPVVWVALLSASRTHANVELGEYAASKLIESGAENDGSYTLLS 660

Query: 661 NLYANARRWKDVARIRSLMKHTGIRKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILG 720
           NLYANARRWKDVARIR LMKHTGI+KRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNIL 
Sbjct: 661 NLYANARRWKDVARIRRLMKHTGIKKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILS 720

Query: 721 DLIQRIKDMGYIPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIHISKNLR 780
           DLIQRIKDMGY+PQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPI I+KNLR
Sbjct: 721 DLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRINKNLR 780

Query: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 823
           ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW
Sbjct: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 822

BLAST of Sed0001312 vs. NCBI nr
Match: XP_023004455.1 (pentatricopeptide repeat-containing protein At5g16860 [Cucurbita maxima] >XP_023004456.1 pentatricopeptide repeat-containing protein At5g16860 [Cucurbita maxima])

HSP 1 Score: 1528.5 bits (3956), Expect = 0.0e+00
Identity = 745/822 (90.63%), Postives = 785/822 (95.50%), Query Frame = 0

Query: 1   MSFLKQCRTLISAKLAHQQILVNGFTDLITYAVGGYIECGAFAQAVLLLERLIPSHSTVF 60
           MSFLKQCRTLI AKL HQQILVNGFTDL+T+A+GGYIEC AFAQAV LLERL+PSHS VF
Sbjct: 1   MSFLKQCRTLIDAKLVHQQILVNGFTDLVTHAIGGYIECNAFAQAVSLLERLVPSHSAVF 60

Query: 61  WWNALIRRSVRLVLLDDALGYYCQMQRLGCSPDHYTFPFILKACGEIPSFRWGASVHAIV 120
           WWNALIRRSVRL  LDDAL +Y QM+RLG SPD+YTFPF+LKACGE  SFR GASVHA+V
Sbjct: 61  WWNALIRRSVRLGFLDDALCFYRQMERLGWSPDYYTFPFVLKACGEKLSFRCGASVHAMV 120

Query: 121 CASGFQSNVFICNSMVAMYGRCGALDDARQVFDEVLERKIEDIVSWNSILAAYVQGGKSK 180
           CA GF+SNVFICNS+VAMYGRCGALDDARQVFDEVLERKI+DIVSWNSILAAYVQGG+SK
Sbjct: 121 CAYGFESNVFICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQGGESK 180

Query: 181 TALKIAFQMAKHYSFELRPDAITLVNILPACASTFASQHGRQVHGFAVRSGLGDDVFVGN 240
            AL+IAFQMAKHY+F+L PDAITLVN+LPACASTFA++HGRQVHGFAVRSGL DDVFVGN
Sbjct: 181 AALRIAFQMAKHYNFKLFPDAITLVNVLPACASTFATEHGRQVHGFAVRSGLVDDVFVGN 240

Query: 241 ALVDMYAKCSKMTEANKVFEHMKEKDVVSWNAIVTGYSQIGRFDDALALFQRMQEEDIEL 300
           ALVDMYAKCSKM EANK+FE MKEKDVVSWNA+VTGYSQIG FDDAL+LF+RMQEEDIEL
Sbjct: 241 ALVDMYAKCSKMNEANKMFEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQEEDIEL 300

Query: 301 NVVTWSAVIAGYAQRGHGFEALDVFRQMQLCGLEPNVITLVSLLSGCASVGALLHGKQTH 360
           NVVTWSAVIAGY+QRGHG EALDVFRQMQ CGLEPNV+TLVSLLSGCASVGALLHGKQTH
Sbjct: 301 NVVTWSAVIAGYSQRGHGCEALDVFRQMQNCGLEPNVVTLVSLLSGCASVGALLHGKQTH 360

Query: 361 AYAIKNILKLERSDLGDDLMVINGLIDMYAKCKSSKVARNIFDLITGKDKNVVTWTVMIG 420
           AYAIKNIL L+ SD GDD+MV NGLIDMYAKCKSS+VAR+IFD I GKDKNVVTWTVMIG
Sbjct: 361 AYAIKNILNLDWSDPGDDMMVFNGLIDMYAKCKSSRVARSIFDSIIGKDKNVVTWTVMIG 420

Query: 421 GYAQHGEANDAIELFSQMFKQECSLKPNAFTLSCALMACARLGALRLGRQIHAYALRHEN 480
           GYAQHGEANDAIELFSQMFKQE SLKPNAFTLSCALMACARLGALRLG+QIHAYALRHEN
Sbjct: 421 GYAQHGEANDAIELFSQMFKQETSLKPNAFTLSCALMACARLGALRLGKQIHAYALRHEN 480

Query: 481 ESEVLYVANCLIDMYSKSGDIDAAQIVFDNMKIQNAVSWTSLMTGYGIHGRGEEALQVFN 540
           ESEVLYVANCLIDMYSKSGDIDAAQIVFDNMK+QNAVSWTSLMTGYGIHGRGEEAL+VFN
Sbjct: 481 ESEVLYVANCLIDMYSKSGDIDAAQIVFDNMKVQNAVSWTSLMTGYGIHGRGEEALRVFN 540

Query: 541 QMRQVGLAVDGVTFLVVLYACSHSGMVDQGMNYFHGMAKNFGVVPGAEHYACMVDLLGRA 600
           QMR+VGL+VDGVTFLVVLYACSHSGMVDQGMNYFHGM K FGV PGAEHYACMVDLLGRA
Sbjct: 541 QMREVGLSVDGVTFLVVLYACSHSGMVDQGMNYFHGMVKYFGVAPGAEHYACMVDLLGRA 600

Query: 601 GRLDEAMELIESMPMEPTQVVWVALLSSSRTHANVELGEYAASKLIESGLENDGSYTLLS 660
           GRL+EAMELI+SMPMEPT VVWVALLS+SRTHANVELGEYAASKLIESG ENDGSYTLLS
Sbjct: 601 GRLNEAMELIKSMPMEPTPVVWVALLSASRTHANVELGEYAASKLIESGAENDGSYTLLS 660

Query: 661 NLYANARRWKDVARIRSLMKHTGIRKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILG 720
           NLYANARRWKDVARIR LMKHTGI+KRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNIL 
Sbjct: 661 NLYANARRWKDVARIRRLMKHTGIKKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILA 720

Query: 721 DLIQRIKDMGYIPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIHISKNLR 780
           DLIQRIKDMGY+PQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPI I+KNLR
Sbjct: 721 DLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRINKNLR 780

Query: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 823
           ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW
Sbjct: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 822

BLAST of Sed0001312 vs. NCBI nr
Match: KAG7025541.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1528.5 bits (3956), Expect = 0.0e+00
Identity = 744/822 (90.51%), Postives = 784/822 (95.38%), Query Frame = 0

Query: 1   MSFLKQCRTLISAKLAHQQILVNGFTDLITYAVGGYIECGAFAQAVLLLERLIPSHSTVF 60
           MSFLK+CRTLI AKL HQQILVNGFT+L+T+A+GGYIEC AF QAV LLERL+PSHSTVF
Sbjct: 1   MSFLKRCRTLIDAKLVHQQILVNGFTNLVTHAIGGYIECNAFGQAVSLLERLVPSHSTVF 60

Query: 61  WWNALIRRSVRLVLLDDALGYYCQMQRLGCSPDHYTFPFILKACGEIPSFRWGASVHAIV 120
           WWNALIRRSVRL  LDDAL +Y QMQRLG  PDHYTFPF+LKACGE  SFR G SVHA+V
Sbjct: 61  WWNALIRRSVRLGFLDDALCFYRQMQRLGWWPDHYTFPFVLKACGEKLSFRCGTSVHAMV 120

Query: 121 CASGFQSNVFICNSMVAMYGRCGALDDARQVFDEVLERKIEDIVSWNSILAAYVQGGKSK 180
           CA GF+SNVFICNS+VAMYGRCGALDDARQVFDEVLERKI+DIVSWNSILAAYVQGG+SK
Sbjct: 121 CAYGFESNVFICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQGGESK 180

Query: 181 TALKIAFQMAKHYSFELRPDAITLVNILPACASTFASQHGRQVHGFAVRSGLGDDVFVGN 240
            AL+IAFQMAKHY+F+LRPDAITLVN+LPACASTFA+QHGRQVHGFAVRSGL DDVFVGN
Sbjct: 181 AALRIAFQMAKHYNFKLRPDAITLVNVLPACASTFATQHGRQVHGFAVRSGLVDDVFVGN 240

Query: 241 ALVDMYAKCSKMTEANKVFEHMKEKDVVSWNAIVTGYSQIGRFDDALALFQRMQEEDIEL 300
           ALVDMYAKCSKM EANKVFE MKEKDVVSWNA+VTGYSQIG FDDAL+LF+RMQEEDIEL
Sbjct: 241 ALVDMYAKCSKMNEANKVFEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQEEDIEL 300

Query: 301 NVVTWSAVIAGYAQRGHGFEALDVFRQMQLCGLEPNVITLVSLLSGCASVGALLHGKQTH 360
           NVVTWSAVIAGY+QRGHG EALDVFRQMQ CGLEPNV+TLVSLLSGCASVGALLHGKQTH
Sbjct: 301 NVVTWSAVIAGYSQRGHGCEALDVFRQMQHCGLEPNVVTLVSLLSGCASVGALLHGKQTH 360

Query: 361 AYAIKNILKLERSDLGDDLMVINGLIDMYAKCKSSKVARNIFDLITGKDKNVVTWTVMIG 420
           AYAIKNIL L+ SD GDD+MV NGLIDMYAKCKSS+VARNIFD I GKDKNVVTWTVMIG
Sbjct: 361 AYAIKNILNLDWSDPGDDMMVFNGLIDMYAKCKSSRVARNIFDSIIGKDKNVVTWTVMIG 420

Query: 421 GYAQHGEANDAIELFSQMFKQECSLKPNAFTLSCALMACARLGALRLGRQIHAYALRHEN 480
           GYAQHGEANDA+ELFSQMFKQE SLKPNAFTLSCALMACARLGALRLG+QIHAYALRHEN
Sbjct: 421 GYAQHGEANDAVELFSQMFKQETSLKPNAFTLSCALMACARLGALRLGKQIHAYALRHEN 480

Query: 481 ESEVLYVANCLIDMYSKSGDIDAAQIVFDNMKIQNAVSWTSLMTGYGIHGRGEEALQVFN 540
           ESEVL+VANCLIDMYSKSGDIDAAQIVFDNMK++NAVSWTSLMTGYGIHGRGEEAL+VFN
Sbjct: 481 ESEVLHVANCLIDMYSKSGDIDAAQIVFDNMKVRNAVSWTSLMTGYGIHGRGEEALRVFN 540

Query: 541 QMRQVGLAVDGVTFLVVLYACSHSGMVDQGMNYFHGMAKNFGVVPGAEHYACMVDLLGRA 600
           QMRQVGL+VDGVTFLVVLYACSHSGMVDQGMNYFHGM K FGV PGAEHYACMVDLLGRA
Sbjct: 541 QMRQVGLSVDGVTFLVVLYACSHSGMVDQGMNYFHGMVKCFGVAPGAEHYACMVDLLGRA 600

Query: 601 GRLDEAMELIESMPMEPTQVVWVALLSSSRTHANVELGEYAASKLIESGLENDGSYTLLS 660
           GRL+EAMELI+SMPMEPT VVWVALLS+SRTHANVELGEYAASKLIESG ENDGSYTLLS
Sbjct: 601 GRLNEAMELIKSMPMEPTPVVWVALLSASRTHANVELGEYAASKLIESGAENDGSYTLLS 660

Query: 661 NLYANARRWKDVARIRSLMKHTGIRKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILG 720
           NLYANARRWKDVARIR LMKHTGI+KRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNIL 
Sbjct: 661 NLYANARRWKDVARIRRLMKHTGIKKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILS 720

Query: 721 DLIQRIKDMGYIPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIHISKNLR 780
           DLIQRIKDMGY+PQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPI ++KNLR
Sbjct: 721 DLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRVNKNLR 780

Query: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 823
           ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW
Sbjct: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 822

BLAST of Sed0001312 vs. NCBI nr
Match: KAG6593141.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1528.5 bits (3956), Expect = 0.0e+00
Identity = 744/822 (90.51%), Postives = 783/822 (95.26%), Query Frame = 0

Query: 1   MSFLKQCRTLISAKLAHQQILVNGFTDLITYAVGGYIECGAFAQAVLLLERLIPSHSTVF 60
           MSFLK+CRTLI AKL HQQILVNGFTDL+T+A+GGYIEC AF QAV LLERL+PSHSTVF
Sbjct: 1   MSFLKRCRTLIDAKLVHQQILVNGFTDLVTHAIGGYIECNAFGQAVSLLERLVPSHSTVF 60

Query: 61  WWNALIRRSVRLVLLDDALGYYCQMQRLGCSPDHYTFPFILKACGEIPSFRWGASVHAIV 120
           WWNALIRRSVRL  LDDAL +Y QMQRLG  PDHYTFPF+LKACGE  SFR G SVHA+V
Sbjct: 61  WWNALIRRSVRLGFLDDALCFYRQMQRLGWWPDHYTFPFVLKACGEKLSFRCGTSVHAMV 120

Query: 121 CASGFQSNVFICNSMVAMYGRCGALDDARQVFDEVLERKIEDIVSWNSILAAYVQGGKSK 180
           CA GF+SNVFICNS+VAMYGRCGALDDARQVFDEVLERKI+DIVSWNSILAAYVQGG+SK
Sbjct: 121 CAYGFESNVFICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQGGESK 180

Query: 181 TALKIAFQMAKHYSFELRPDAITLVNILPACASTFASQHGRQVHGFAVRSGLGDDVFVGN 240
            AL+IAFQMAKHY+F+LRPDAITLVN+LPACASTFA+QHGRQVHGFAVRSGL DDVFVGN
Sbjct: 181 AALRIAFQMAKHYNFKLRPDAITLVNVLPACASTFATQHGRQVHGFAVRSGLVDDVFVGN 240

Query: 241 ALVDMYAKCSKMTEANKVFEHMKEKDVVSWNAIVTGYSQIGRFDDALALFQRMQEEDIEL 300
           ALVDMYAKCSKM EANKVFE MKEKDVVSWNA+VTGYSQIG FDDAL+LF+RMQEEDIEL
Sbjct: 241 ALVDMYAKCSKMNEANKVFEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQEEDIEL 300

Query: 301 NVVTWSAVIAGYAQRGHGFEALDVFRQMQLCGLEPNVITLVSLLSGCASVGALLHGKQTH 360
           NVVTWSAVIAGY+QRGHG EALDVFRQMQ CGLEPNV+TLVSLLSGCASVGALLHGKQTH
Sbjct: 301 NVVTWSAVIAGYSQRGHGCEALDVFRQMQHCGLEPNVVTLVSLLSGCASVGALLHGKQTH 360

Query: 361 AYAIKNILKLERSDLGDDLMVINGLIDMYAKCKSSKVARNIFDLITGKDKNVVTWTVMIG 420
           AYAIKNIL L+ SD GDD+MV NGLIDMYAKCKSS+VARNIFD I GKDKNVVTWTVMIG
Sbjct: 361 AYAIKNILNLDWSDPGDDMMVFNGLIDMYAKCKSSRVARNIFDSIIGKDKNVVTWTVMIG 420

Query: 421 GYAQHGEANDAIELFSQMFKQECSLKPNAFTLSCALMACARLGALRLGRQIHAYALRHEN 480
           GYAQHGEANDA+ELFSQMFKQE SLKPNAFTLSCALMACARLGALRLG+QIHAY LRHEN
Sbjct: 421 GYAQHGEANDAVELFSQMFKQETSLKPNAFTLSCALMACARLGALRLGKQIHAYTLRHEN 480

Query: 481 ESEVLYVANCLIDMYSKSGDIDAAQIVFDNMKIQNAVSWTSLMTGYGIHGRGEEALQVFN 540
           ESEVL+VANCLIDMYSKSGDIDAAQIVFDNMK++NAVSWTSLMTGYGIHGRGEEAL+VFN
Sbjct: 481 ESEVLHVANCLIDMYSKSGDIDAAQIVFDNMKVRNAVSWTSLMTGYGIHGRGEEALRVFN 540

Query: 541 QMRQVGLAVDGVTFLVVLYACSHSGMVDQGMNYFHGMAKNFGVVPGAEHYACMVDLLGRA 600
           QMRQVGL+VDGVTFLVVLYACSHSGMVDQGMNYFHGM K FGV PGAEHYACMVDLLGRA
Sbjct: 541 QMRQVGLSVDGVTFLVVLYACSHSGMVDQGMNYFHGMVKYFGVAPGAEHYACMVDLLGRA 600

Query: 601 GRLDEAMELIESMPMEPTQVVWVALLSSSRTHANVELGEYAASKLIESGLENDGSYTLLS 660
           GRL+EAMELI+SMPMEPT VVWVALLS+SRTHANVELGEYAASKL+ESG ENDGSYTLLS
Sbjct: 601 GRLNEAMELIKSMPMEPTPVVWVALLSASRTHANVELGEYAASKLMESGAENDGSYTLLS 660

Query: 661 NLYANARRWKDVARIRSLMKHTGIRKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILG 720
           NLYANARRWKDVARIR LMKHTGI+KRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNIL 
Sbjct: 661 NLYANARRWKDVARIRRLMKHTGIKKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILS 720

Query: 721 DLIQRIKDMGYIPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIHISKNLR 780
           DLIQRIKDMGY+PQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPI I+KNLR
Sbjct: 721 DLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRINKNLR 780

Query: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 823
           ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW
Sbjct: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 822

BLAST of Sed0001312 vs. ExPASy Swiss-Prot
Match: Q9LFL5 (Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H92 PE=2 SV=1)

HSP 1 Score: 1042.7 bits (2695), Expect = 2.2e-303
Identity = 503/822 (61.19%), Postives = 629/822 (76.52%), Query Frame = 0

Query: 3   FLKQCRTLISAKLAHQQILVNGF--TDLITYAVGGYIECGAFAQAVLLLERLIPSHSTVF 62
           F+ +C+T+   KL HQ++L  G    +L ++ +  YI  G  + AV LL R  PS + V+
Sbjct: 34  FIHKCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVY 93

Query: 63  WWNALIRRSVRLVLLDDALGYYCQMQRLGCSPDHYTFPFILKACGEIPSFRWGASVHAIV 122
            WN+LIR        +  L  +  M  L  +PD+YTFPF+ KACGEI S R G S HA+ 
Sbjct: 94  HWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALS 153

Query: 123 CASGFQSNVFICNSMVAMYGRCGALDDARQVFDEVLERKIEDIVSWNSILAAYVQGGKSK 182
             +GF SNVF+ N++VAMY RC +L DAR+VFDE+    + D+VSWNSI+ +Y + GK K
Sbjct: 154 LVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEM---SVWDVVSWNSIIESYAKLGKPK 213

Query: 183 TALKIAFQMAKHYSFELRPDAITLVNILPACASTFASQHGRQVHGFAVRSGLGDDVFVGN 242
            AL++  +M     F  RPD ITLVN+LP CAS      G+Q+H FAV S +  ++FVGN
Sbjct: 214 VALEMFSRMTN--EFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGN 273

Query: 243 ALVDMYAKCSKMTEANKVFEHMKEKDVVSWNAIVTGYSQIGRFDDALALFQRMQEEDIEL 302
            LVDMYAKC  M EAN VF +M  KDVVSWNA+V GYSQIGRF+DA+ LF++MQEE I++
Sbjct: 274 CLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKM 333

Query: 303 NVVTWSAVIAGYAQRGHGFEALDVFRQMQLCGLEPNVITLVSLLSGCASVGALLHGKQTH 362
           +VVTWSA I+GYAQRG G+EAL V RQM   G++PN +TL+S+LSGCASVGAL+HGK+ H
Sbjct: 334 DVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIH 393

Query: 363 AYAIKNILKLERSDLGDDLMVINGLIDMYAKCKSSKVARNIFDLITGKDKNVVTWTVMIG 422
            YAIK  + L ++  GD+ MVIN LIDMYAKCK    AR +FD ++ K+++VVTWTVMIG
Sbjct: 394 CYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIG 453

Query: 423 GYAQHGEANDAIELFSQMFKQECSLKPNAFTLSCALMACARLGALRLGRQIHAYALRHEN 482
           GY+QHG+AN A+EL S+MF+++C  +PNAFT+SCAL+ACA L ALR+G+QIHAYALR++ 
Sbjct: 454 GYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQ 513

Query: 483 ESEVLYVANCLIDMYSKSGDIDAAQIVFDNMKIQNAVSWTSLMTGYGIHGRGEEALQVFN 542
            +  L+V+NCLIDMY+K G I  A++VFDNM  +N V+WTSLMTGYG+HG GEEAL +F+
Sbjct: 514 NAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFD 573

Query: 543 QMRQVGLAVDGVTFLVVLYACSHSGMVDQGMNYFHGMAKNFGVVPGAEHYACMVDLLGRA 602
           +MR++G  +DGVT LVVLYACSHSGM+DQGM YF+ M   FGV PG EHYAC+VDLLGRA
Sbjct: 574 EMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRA 633

Query: 603 GRLDEAMELIESMPMEPTQVVWVALLSSSRTHANVELGEYAASKLIESGLENDGSYTLLS 662
           GRL+ A+ LIE MPMEP  VVWVA LS  R H  VELGEYAA K+ E    +DGSYTLLS
Sbjct: 634 GRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLS 693

Query: 663 NLYANARRWKDVARIRSLMKHTGIRKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILG 722
           NLYANA RWKDV RIRSLM+H G++KRPGCSWV+G K TTTFFVGDK+HP + +IY +L 
Sbjct: 694 NLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLL 753

Query: 723 DLIQRIKDMGYIPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIHISKNLR 782
           D +QRIKD+GY+P+T FALHDVDDEEK DLLFEHSEKLA+AYGILT+  G  I I+KNLR
Sbjct: 754 DHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLR 813

Query: 783 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 823
           +CGDCH+A TY+S II+H+IILRDSSRFHHFK GSCSC+GYW
Sbjct: 814 VCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850

BLAST of Sed0001312 vs. ExPASy Swiss-Prot
Match: Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)

HSP 1 Score: 560.1 bits (1442), Expect = 4.2e-158
Identity = 292/787 (37.10%), Postives = 447/787 (56.80%), Query Frame = 0

Query: 36  YIECGAFAQAVLLLERLIPSHSTVFWWNALIRRSVRLVLLDDALGYYCQMQRLGCSPDHY 95
           Y  CG   +A  + + +        +WN L+    +      ++G + +M   G   D Y
Sbjct: 139 YTNCGDLKEASRVFDEV--KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSY 198

Query: 96  TFPFILKACGEIPSFRWGASVHAIVCASGFQSNVFICNSMVAMYGRCGALDDARQVFDEV 155
           TF  + K+   + S   G  +H  +  SGF     + NS+VA Y +   +D AR+VFDE+
Sbjct: 199 TFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEM 258

Query: 156 LERKIEDIVSWNSILAAYVQGGKSKTALKIAFQMAKHYSFELRPDAITLVNILPACASTF 215
            ER   D++SWNSI+  YV  G ++  L +  QM       +  D  T+V++   CA + 
Sbjct: 259 TER---DVISWNSIINGYVSNGLAEKGLSVFVQMLVS---GIEIDLATIVSVFAGCADSR 318

Query: 216 ASQHGRQVHGFAVRSGLGDDVFVGNALVDMYAKCSKMTEANKVFEHMKEKDVVSWNAIVT 275
               GR VH   V++    +    N L+DMY+KC  +  A  VF  M ++ VVS+ +++ 
Sbjct: 319 LISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIA 378

Query: 276 GYSQIGRFDDALALFQRMQEEDIELNVVTWSAVIAGYAQRGHGFEALDVFRQMQLCGLEP 335
           GY++ G   +A+ LF+ M+EE                                   G+ P
Sbjct: 379 GYAREGLAGEAVKLFEEMEEE-----------------------------------GISP 438

Query: 336 NVITLVSLLSGCASVGALLHGKQTHAYAIKNILKLERSDLGDDLMVINGLIDMYAKCKSS 395
           +V T+ ++L+ CA    L  GK+ H +       ++ +DLG D+ V N L+DMYAKC S 
Sbjct: 439 DVYTVTAVLNCCARYRLLDEGKRVHEW-------IKENDLGFDIFVSNALMDMYAKCGSM 498

Query: 396 KVARNIFDLITGKDKNVVTWTVMIGGYAQHGEANDAIELFSQMFKQECSLKPNAFTLSCA 455
           + A  +F  +  KD  +++W  +IGGY+++  AN+A+ LF+ +  +E    P+  T++C 
Sbjct: 499 QEAELVFSEMRVKD--IISWNTIIGGYSKNCYANEALSLFN-LLLEEKRFSPDERTVACV 558

Query: 456 LMACARLGALRLGRQIHAYALRHENESEVLYVANCLIDMYSKSGDIDAAQIVFDNMKIQN 515
           L ACA L A   GR+IH Y +R+   S+  +VAN L+DMY+K G +  A ++FD++  ++
Sbjct: 559 LPACASLSAFDKGREIHGYIMRNGYFSD-RHVANSLVDMYAKCGALLLAHMLFDDIASKD 618

Query: 516 AVSWTSLMTGYGIHGRGEEALQVFNQMRQVGLAVDGVTFLVVLYACSHSGMVDQGMNYFH 575
            VSWT ++ GYG+HG G+EA+ +FNQMRQ G+  D ++F+ +LYACSHSG+VD+G  +F+
Sbjct: 619 LVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFN 678

Query: 576 GMAKNFGVVPGAEHYACMVDLLGRAGRLDEAMELIESMPMEPTQVVWVALLSSSRTHANV 635
            M     + P  EHYAC+VD+L R G L +A   IE+MP+ P   +W ALL   R H +V
Sbjct: 679 IMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDV 738

Query: 636 ELGEYAASKLIESGLENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKRPGCSWVQG 695
           +L E  A K+ E   EN G Y L++N+YA A +W+ V R+R  +   G+RK PGCSW++ 
Sbjct: 739 KLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEI 798

Query: 696 KKSTTTFFVGDKSHPQSDQIYNILGDLIQRIKDMGYIPQTSFALHDVDDEEKGDLLFEHS 755
           K     F  GD S+P+++ I   L  +  R+ + GY P T +AL D ++ EK + L  HS
Sbjct: 799 KGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHS 858

Query: 756 EKLAVAYGILTSAPGQPIHISKNLRICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGS 815
           EKLA+A GI++S  G+ I ++KNLR+CGDCH    ++S +   EI+LRDS+RFH FK G 
Sbjct: 859 EKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGH 871

Query: 816 CSCRGYW 823
           CSCRG+W
Sbjct: 919 CSCRGFW 871

BLAST of Sed0001312 vs. ExPASy Swiss-Prot
Match: Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 542.7 bits (1397), Expect = 7.0e-153
Identity = 291/822 (35.40%), Postives = 466/822 (56.69%), Query Frame = 0

Query: 4   LKQCRTLISAKLAHQQILVNGFTD---LITYAVGGYIECGAFAQAVLLLERLIPSHSTVF 63
           L++C +L   +     +  NG        T  V  +   G+  +A  + E +    + ++
Sbjct: 44  LERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLY 103

Query: 64  WWNALIRRSVRLVLLDDALGYYCQMQRLGCSPDHYTFPFILKACGEIPSFRWGASVHAIV 123
             + +++   ++  LD AL ++ +M+     P  Y F ++LK CG+    R G  +H ++
Sbjct: 104 --HTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLL 163

Query: 124 CASGFQSNVFICNSMVAMYGRCGALDDARQVFDEVLERKIEDIVSWNSILAAYVQGGKSK 183
             SGF  ++F    +  MY +C  +++AR+VFD + ER   D+VSWN+I+A Y Q G ++
Sbjct: 164 VKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPER---DLVSWNTIVAGYSQNGMAR 223

Query: 184 TALKIAFQMAKHYSFELRPDAITLVNILPACASTFASQHGRQVHGFAVRSGLGDDVFVGN 243
            AL++   M +     L+P  IT+V++LPA ++      G+++HG+A+RSG    V +  
Sbjct: 224 MALEMVKSMCEE---NLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIST 283

Query: 244 ALVDMYAKCSKMTEANKVFEHMKEKDVVSWNAIVTGYSQIGRFDDALALFQRMQEEDIEL 303
           ALVDMYAKC  +  A ++F+ M E++VVSWN+++  Y Q     +A+ +FQ+M +E    
Sbjct: 284 ALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDE---- 343

Query: 304 NVVTWSAVIAGYAQRGHGFEALDVFRQMQLCGLEPNVITLVSLLSGCASVGALLHGKQTH 363
                                          G++P  ++++  L  CA +G L  G+  H
Sbjct: 344 -------------------------------GVKPTDVSVMGALHACADLGDLERGRFIH 403

Query: 364 AYAIKNILKLERSDLGDDLMVINGLIDMYAKCKSSKVARNIFDLITGKDKNVVTWTVMIG 423
             +++  L L+R     ++ V+N LI MY KCK    A ++F  +  + + +V+W  MI 
Sbjct: 404 KLSVE--LGLDR-----NVSVVNSLISMYCKCKEVDTAASMFGKL--QSRTLVSWNAMIL 463

Query: 424 GYAQHGEANDAIELFSQMFKQECSLKPNAFTLSCALMACARLGALRLGRQIHAYALRHEN 483
           G+AQ+G   DA+  FSQM  +  ++KP+ FT    + A A L      + IH   +R   
Sbjct: 464 GFAQNGRPIDALNYFSQM--RSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCL 523

Query: 484 ESEVLYVANCLIDMYSKSGDIDAAQIVFDNMKIQNAVSWTSLMTGYGIHGRGEEALQVFN 543
           +  V +V   L+DMY+K G I  A+++FD M  ++  +W +++ GYG HG G+ AL++F 
Sbjct: 524 DKNV-FVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFE 583

Query: 544 QMRQVGLAVDGVTFLVVLYACSHSGMVDQGMNYFHGMAKNFGVVPGAEHYACMVDLLGRA 603
           +M++  +  +GVTFL V+ ACSHSG+V+ G+  F+ M +N+ +    +HY  MVDLLGRA
Sbjct: 584 EMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRA 643

Query: 604 GRLDEAMELIESMPMEPTQVVWVALLSSSRTHANVELGEYAASKLIESGLENDGSYTLLS 663
           GRL+EA + I  MP++P   V+ A+L + + H NV   E AA +L E   ++ G + LL+
Sbjct: 644 GRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLA 703

Query: 664 NLYANARRWKDVARIRSLMKHTGIRKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILG 723
           N+Y  A  W+ V ++R  M   G+RK PGCS V+ K    +FF G  +HP S +IY  L 
Sbjct: 704 NIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLE 763

Query: 724 DLIQRIKDMGYIPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIHISKNLR 783
            LI  IK+ GY+P T+  L  V+++ K  LL  HSEKLA+++G+L +  G  IH+ KNLR
Sbjct: 764 KLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLR 809

Query: 784 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 823
           +C DCH+A  YIS++   EI++RD  RFHHFK G+CSC  YW
Sbjct: 824 VCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809

BLAST of Sed0001312 vs. ExPASy Swiss-Prot
Match: Q0WN60 (Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H8 PE=2 SV=2)

HSP 1 Score: 542.0 bits (1395), Expect = 1.2e-152
Identity = 305/866 (35.22%), Postives = 472/866 (54.50%), Query Frame = 0

Query: 28  LITYAVGGYIECGAFAQAVLLLERLIPSHSTVFWWNALIRRSVRLVLLDDALGYYCQM-Q 87
           L T  +  Y  CG+   +  + + L      +F WNA+I    R  L D+ L  + +M  
Sbjct: 122 LCTRIITMYAMCGSPDDSRFVFDAL--RSKNLFQWNAVISSYSRNELYDEVLETFIEMIS 181

Query: 88  RLGCSPDHYTFPFILKACGEIPSFRWGASVHAIVCASGFQSNVFICNSMVAMYGRCGALD 147
                PDH+T+P ++KAC  +     G +VH +V  +G   +VF+ N++V+ YG  G + 
Sbjct: 182 TTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVT 241

Query: 148 DARQVFDEVLERKIEDIVSWNSILAAYVQGGKSKTA-LKIAFQMAKHYSFELRPDAITLV 207
           DA Q+FD + ER   ++VSWNS++  +   G S+ + L +   M ++      PD  TLV
Sbjct: 242 DALQLFDIMPER---NLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLV 301

Query: 208 NILPACASTFASQHGRQVHGFAVRSGLGDDVFVGNALVDMYAKCSKMTEANKVFEHMKEK 267
            +LP CA       G+ VHG+AV+  L  ++ + NAL+DMY+KC  +T A  +F+    K
Sbjct: 302 TVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNK 361

Query: 268 DVVSWNAIVTGYSQIGRFDDALALFQRMQE--EDIELNVVT------------------- 327
           +VVSWN +V G+S  G       + ++M    ED++ + VT                   
Sbjct: 362 NVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKE 421

Query: 328 -----------------------------------------------WSAVIAGYAQRGH 387
                                                          W+A+I G+AQ   
Sbjct: 422 LHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSND 481

Query: 388 GFEALDVFRQMQLCGLEPNVITLVSLLSGCASVGALLHGKQTHAYAIKNILKLERSDLGD 447
              +LD   QM++ GL P+  T+ SLLS C+ + +L  GK+ H + I+N L+        
Sbjct: 482 PRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLE-------R 541

Query: 448 DLMVINGLIDMYAKCKSSKVARNIFDLITGKDKNVVTWTVMIGGYAQHGEANDAIELFSQ 507
           DL V   ++ +Y  C      + +FD +  +DK++V+W  +I GY Q+G  + A+ +F Q
Sbjct: 542 DLFVYLSVLSLYIHCGELCTVQALFDAM--EDKSLVSWNTVITGYLQNGFPDRALGVFRQ 601

Query: 508 MFKQECSLKPNAFTLSCALMACARLGALRLGRQIHAYALRHENESEVLYVANCLIDMYSK 567
           M      L     ++     AC+ L +LRLGR+ HAYAL+H  E +  ++A  LIDMY+K
Sbjct: 602 MVLYGIQL--CGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDA-FIACSLIDMYAK 661

Query: 568 SGDIDAAQIVFDNMKIQNAVSWTSLMTGYGIHGRGEEALQVFNQMRQVGLAVDGVTFLVV 627
           +G I  +  VF+ +K ++  SW +++ GYGIHG  +EA+++F +M++ G   D +TFL V
Sbjct: 662 NGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGV 721

Query: 628 LYACSHSGMVDQGMNYFHGMAKNFGVVPGAEHYACMVDLLGRAGRLDEAMELI-ESMPME 687
           L AC+HSG++ +G+ Y   M  +FG+ P  +HYAC++D+LGRAG+LD+A+ ++ E M  E
Sbjct: 722 LTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEE 781

Query: 688 PTQVVWVALLSSSRTHANVELGEYAASKLIESGLENDGSYTLLSNLYANARRWKDVARIR 747
               +W +LLSS R H N+E+GE  A+KL E   E   +Y LLSNLYA   +W+DV ++R
Sbjct: 782 ADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVR 841

Query: 748 SLMKHTGIRKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILGDLIQRIKDMGYIPQTS 807
             M    +RK  GCSW++  +   +F VG++     ++I ++   L  +I  MGY P T 
Sbjct: 842 QRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTM 901

Query: 808 FALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIHISKNLRICGDCHSALTYISMII 823
              HD+ +EEK + L  HSEKLA+ YG++ ++ G  I + KNLRIC DCH+A   IS ++
Sbjct: 902 SVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVM 961

BLAST of Sed0001312 vs. ExPASy Swiss-Prot
Match: Q9SHZ8 (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H41 PE=3 SV=1)

HSP 1 Score: 533.9 bits (1374), Expect = 3.3e-150
Identity = 281/728 (38.60%), Postives = 429/728 (58.93%), Query Frame = 0

Query: 130 FICNSMVAMYGRCGALDDARQVFDEVLERKIEDIVSWNSILAAYVQGGKSKTALKIAFQM 189
           F  N++++ Y + G +D   + FD++ +R   D VSW +++  Y   G+   A+++   M
Sbjct: 81  FSWNTVLSAYSKRGDMDSTCEFFDQLPQR---DSVSWTTMIVGYKNIGQYHKAIRVMGDM 140

Query: 190 AKHYSFELRPDAITLVNILPACASTFASQHGRQVHGFAVRSGLGDDVFVGNALVDMYAKC 249
            K     + P   TL N+L + A+T   + G++VH F V+ GL  +V V N+L++MYAKC
Sbjct: 141 VKE---GIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKC 200

Query: 250 SKMTEANKVFEHMKEKDVVSWNAIVTGYSQIGRFDDALALFQRMQEEDIELNVVTWSAVI 309
                A  VF+ M  +D+ SWNA++  + Q+G+ D A+A F++M E DI    VTW+++I
Sbjct: 201 GDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI----VTWNSMI 260

Query: 310 AGYAQRGHGFEALDVFRQMQLCG-LEPNVITLVSLLSGCASVGALLHGKQTHAYAIKNIL 369
           +G+ QRG+   ALD+F +M     L P+  TL S+LS CA++  L  GKQ H++ +    
Sbjct: 261 SGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTT-- 320

Query: 370 KLERSDLGDDL--MVINGLIDMYAKCKSSKVARNIFD----------------------- 429
                  G D+  +V+N LI MY++C   + AR + +                       
Sbjct: 321 -------GFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLG 380

Query: 430 --------LITGKDKNVVTWTVMIGGYAQHGEANDAIELFSQMFKQECSLKPNAFTLSCA 489
                    ++ KD++VV WT MI GY QHG   +AI LF  M       +PN++TL+  
Sbjct: 381 DMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGG--GQRPNSYTLAAM 440

Query: 490 LMACARLGALRLGRQIHAYALRHENESEVLYVANCLIDMYSKSGDIDAAQIVFDNMKIQ- 549
           L   + L +L  G+QIH  A++   E   + V+N LI MY+K+G+I +A   FD ++ + 
Sbjct: 441 LSVASSLASLSHGKQIHGSAVK-SGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCER 500

Query: 550 NAVSWTSLMTGYGIHGRGEEALQVFNQMRQVGLAVDGVTFLVVLYACSHSGMVDQGMNYF 609
           + VSWTS++     HG  EEAL++F  M   GL  D +T++ V  AC+H+G+V+QG  YF
Sbjct: 501 DTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYF 560

Query: 610 HGMAKNFGVVPGAEHYACMVDLLGRAGRLDEAMELIESMPMEPTQVVWVALLSSSRTHAN 669
             M     ++P   HYACMVDL GRAG L EA E IE MP+EP  V W +LLS+ R H N
Sbjct: 561 DMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKN 620

Query: 670 VELGEYAASKLIESGLENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKRPGCSWVQ 729
           ++LG+ AA +L+    EN G+Y+ L+NLY+   +W++ A+IR  MK   ++K  G SW++
Sbjct: 621 IDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIE 680

Query: 730 GKKSTTTFFVGDKSHPQSDQIYNILGDLIQRIKDMGYIPQTSFALHDVDDEEKGDLLFEH 789
            K     F V D +HP+ ++IY  +  +   IK MGY+P T+  LHD+++E K  +L  H
Sbjct: 681 VKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHH 740

Query: 790 SEKLAVAYGILTSAPGQPIHISKNLRICGDCHSALTYISMIIEHEIILRDSSRFHHFKKG 823
           SEKLA+A+G++++     + I KNLR+C DCH+A+ +IS ++  EII+RD++RFHHFK G
Sbjct: 741 SEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDG 786

BLAST of Sed0001312 vs. ExPASy TrEMBL
Match: A0A6J1H912 (pentatricopeptide repeat-containing protein At5g16860 OS=Cucurbita moschata OX=3662 GN=LOC111461191 PE=3 SV=1)

HSP 1 Score: 1531.5 bits (3964), Expect = 0.0e+00
Identity = 746/822 (90.75%), Postives = 784/822 (95.38%), Query Frame = 0

Query: 1   MSFLKQCRTLISAKLAHQQILVNGFTDLITYAVGGYIECGAFAQAVLLLERLIPSHSTVF 60
           MSFLKQCRTLI AKL HQQILVNGFTDL+T+A+GGYIEC AF QAV LLERL+PSHSTVF
Sbjct: 1   MSFLKQCRTLIDAKLVHQQILVNGFTDLVTHAIGGYIECNAFGQAVSLLERLVPSHSTVF 60

Query: 61  WWNALIRRSVRLVLLDDALGYYCQMQRLGCSPDHYTFPFILKACGEIPSFRWGASVHAIV 120
           WWNALIRRSVRL  LDDAL +Y QMQRLG  PDHYTFPF+LKACGE  SFR G SVHA+V
Sbjct: 61  WWNALIRRSVRLGFLDDALCFYRQMQRLGWWPDHYTFPFVLKACGEKLSFRCGTSVHAMV 120

Query: 121 CASGFQSNVFICNSMVAMYGRCGALDDARQVFDEVLERKIEDIVSWNSILAAYVQGGKSK 180
           CA GF+SNVFICNS+VAMYGRCGALDDARQVFDEVLERKI+DIVSWNSILAAYVQGG+SK
Sbjct: 121 CAYGFESNVFICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQGGESK 180

Query: 181 TALKIAFQMAKHYSFELRPDAITLVNILPACASTFASQHGRQVHGFAVRSGLGDDVFVGN 240
            AL+IAFQMAKHY+F+LRPDAITLVN+LPACASTFA+QHGRQVHGFAVRSGL DDVFVGN
Sbjct: 181 AALRIAFQMAKHYNFKLRPDAITLVNVLPACASTFATQHGRQVHGFAVRSGLVDDVFVGN 240

Query: 241 ALVDMYAKCSKMTEANKVFEHMKEKDVVSWNAIVTGYSQIGRFDDALALFQRMQEEDIEL 300
           ALVDMYAKCSKM EANKVFE MKEKDVVSWNA+VTGYSQIG FDDAL+LF+RMQEEDIEL
Sbjct: 241 ALVDMYAKCSKMNEANKVFEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQEEDIEL 300

Query: 301 NVVTWSAVIAGYAQRGHGFEALDVFRQMQLCGLEPNVITLVSLLSGCASVGALLHGKQTH 360
           NVVTWSAVIAGY+QRGHG EALDVFRQMQ CGLEPNV+TLVSLLSGCASVGALLHGKQTH
Sbjct: 301 NVVTWSAVIAGYSQRGHGCEALDVFRQMQHCGLEPNVVTLVSLLSGCASVGALLHGKQTH 360

Query: 361 AYAIKNILKLERSDLGDDLMVINGLIDMYAKCKSSKVARNIFDLITGKDKNVVTWTVMIG 420
           AYAIKNIL L+ SD GDD+MV NGLIDMYAKCKSS+VARNIFD I GKDKNVVTWTVMIG
Sbjct: 361 AYAIKNILNLDWSDPGDDMMVFNGLIDMYAKCKSSRVARNIFDSIIGKDKNVVTWTVMIG 420

Query: 421 GYAQHGEANDAIELFSQMFKQECSLKPNAFTLSCALMACARLGALRLGRQIHAYALRHEN 480
           GYAQHGEANDA+ELFSQMFKQE SLKPNAFTLSCALMACARLGALRLG+QIHAYALRHEN
Sbjct: 421 GYAQHGEANDAVELFSQMFKQETSLKPNAFTLSCALMACARLGALRLGKQIHAYALRHEN 480

Query: 481 ESEVLYVANCLIDMYSKSGDIDAAQIVFDNMKIQNAVSWTSLMTGYGIHGRGEEALQVFN 540
           ESEVL+VANCLIDMYSKSGDIDAAQIVFDNMK++NAVSWTSLMTGYGIHGRGEEAL+VFN
Sbjct: 481 ESEVLHVANCLIDMYSKSGDIDAAQIVFDNMKVRNAVSWTSLMTGYGIHGRGEEALRVFN 540

Query: 541 QMRQVGLAVDGVTFLVVLYACSHSGMVDQGMNYFHGMAKNFGVVPGAEHYACMVDLLGRA 600
           QMRQVGL+VDGVTFLVVLYACSHSGMVDQGMNYFHGM K FGV PGAEHYACMVDLLGRA
Sbjct: 541 QMRQVGLSVDGVTFLVVLYACSHSGMVDQGMNYFHGMVKYFGVAPGAEHYACMVDLLGRA 600

Query: 601 GRLDEAMELIESMPMEPTQVVWVALLSSSRTHANVELGEYAASKLIESGLENDGSYTLLS 660
           GRL+EAMELI+SMPMEPT VVWVALLS+SRTHANVELGEYAASKL+ESG ENDGSYTLLS
Sbjct: 601 GRLNEAMELIKSMPMEPTPVVWVALLSASRTHANVELGEYAASKLMESGAENDGSYTLLS 660

Query: 661 NLYANARRWKDVARIRSLMKHTGIRKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILG 720
           NLYANARRWKDVARIR LMKHTGI+KRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNIL 
Sbjct: 661 NLYANARRWKDVARIRRLMKHTGIKKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILS 720

Query: 721 DLIQRIKDMGYIPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIHISKNLR 780
           DLIQRIKDMGY+PQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPI I+KNLR
Sbjct: 721 DLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRINKNLR 780

Query: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 823
           ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW
Sbjct: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 822

BLAST of Sed0001312 vs. ExPASy TrEMBL
Match: A0A6J1KUL7 (pentatricopeptide repeat-containing protein At5g16860 OS=Cucurbita maxima OX=3661 GN=LOC111497759 PE=3 SV=1)

HSP 1 Score: 1528.5 bits (3956), Expect = 0.0e+00
Identity = 745/822 (90.63%), Postives = 785/822 (95.50%), Query Frame = 0

Query: 1   MSFLKQCRTLISAKLAHQQILVNGFTDLITYAVGGYIECGAFAQAVLLLERLIPSHSTVF 60
           MSFLKQCRTLI AKL HQQILVNGFTDL+T+A+GGYIEC AFAQAV LLERL+PSHS VF
Sbjct: 1   MSFLKQCRTLIDAKLVHQQILVNGFTDLVTHAIGGYIECNAFAQAVSLLERLVPSHSAVF 60

Query: 61  WWNALIRRSVRLVLLDDALGYYCQMQRLGCSPDHYTFPFILKACGEIPSFRWGASVHAIV 120
           WWNALIRRSVRL  LDDAL +Y QM+RLG SPD+YTFPF+LKACGE  SFR GASVHA+V
Sbjct: 61  WWNALIRRSVRLGFLDDALCFYRQMERLGWSPDYYTFPFVLKACGEKLSFRCGASVHAMV 120

Query: 121 CASGFQSNVFICNSMVAMYGRCGALDDARQVFDEVLERKIEDIVSWNSILAAYVQGGKSK 180
           CA GF+SNVFICNS+VAMYGRCGALDDARQVFDEVLERKI+DIVSWNSILAAYVQGG+SK
Sbjct: 121 CAYGFESNVFICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQGGESK 180

Query: 181 TALKIAFQMAKHYSFELRPDAITLVNILPACASTFASQHGRQVHGFAVRSGLGDDVFVGN 240
            AL+IAFQMAKHY+F+L PDAITLVN+LPACASTFA++HGRQVHGFAVRSGL DDVFVGN
Sbjct: 181 AALRIAFQMAKHYNFKLFPDAITLVNVLPACASTFATEHGRQVHGFAVRSGLVDDVFVGN 240

Query: 241 ALVDMYAKCSKMTEANKVFEHMKEKDVVSWNAIVTGYSQIGRFDDALALFQRMQEEDIEL 300
           ALVDMYAKCSKM EANK+FE MKEKDVVSWNA+VTGYSQIG FDDAL+LF+RMQEEDIEL
Sbjct: 241 ALVDMYAKCSKMNEANKMFEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQEEDIEL 300

Query: 301 NVVTWSAVIAGYAQRGHGFEALDVFRQMQLCGLEPNVITLVSLLSGCASVGALLHGKQTH 360
           NVVTWSAVIAGY+QRGHG EALDVFRQMQ CGLEPNV+TLVSLLSGCASVGALLHGKQTH
Sbjct: 301 NVVTWSAVIAGYSQRGHGCEALDVFRQMQNCGLEPNVVTLVSLLSGCASVGALLHGKQTH 360

Query: 361 AYAIKNILKLERSDLGDDLMVINGLIDMYAKCKSSKVARNIFDLITGKDKNVVTWTVMIG 420
           AYAIKNIL L+ SD GDD+MV NGLIDMYAKCKSS+VAR+IFD I GKDKNVVTWTVMIG
Sbjct: 361 AYAIKNILNLDWSDPGDDMMVFNGLIDMYAKCKSSRVARSIFDSIIGKDKNVVTWTVMIG 420

Query: 421 GYAQHGEANDAIELFSQMFKQECSLKPNAFTLSCALMACARLGALRLGRQIHAYALRHEN 480
           GYAQHGEANDAIELFSQMFKQE SLKPNAFTLSCALMACARLGALRLG+QIHAYALRHEN
Sbjct: 421 GYAQHGEANDAIELFSQMFKQETSLKPNAFTLSCALMACARLGALRLGKQIHAYALRHEN 480

Query: 481 ESEVLYVANCLIDMYSKSGDIDAAQIVFDNMKIQNAVSWTSLMTGYGIHGRGEEALQVFN 540
           ESEVLYVANCLIDMYSKSGDIDAAQIVFDNMK+QNAVSWTSLMTGYGIHGRGEEAL+VFN
Sbjct: 481 ESEVLYVANCLIDMYSKSGDIDAAQIVFDNMKVQNAVSWTSLMTGYGIHGRGEEALRVFN 540

Query: 541 QMRQVGLAVDGVTFLVVLYACSHSGMVDQGMNYFHGMAKNFGVVPGAEHYACMVDLLGRA 600
           QMR+VGL+VDGVTFLVVLYACSHSGMVDQGMNYFHGM K FGV PGAEHYACMVDLLGRA
Sbjct: 541 QMREVGLSVDGVTFLVVLYACSHSGMVDQGMNYFHGMVKYFGVAPGAEHYACMVDLLGRA 600

Query: 601 GRLDEAMELIESMPMEPTQVVWVALLSSSRTHANVELGEYAASKLIESGLENDGSYTLLS 660
           GRL+EAMELI+SMPMEPT VVWVALLS+SRTHANVELGEYAASKLIESG ENDGSYTLLS
Sbjct: 601 GRLNEAMELIKSMPMEPTPVVWVALLSASRTHANVELGEYAASKLIESGAENDGSYTLLS 660

Query: 661 NLYANARRWKDVARIRSLMKHTGIRKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILG 720
           NLYANARRWKDVARIR LMKHTGI+KRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNIL 
Sbjct: 661 NLYANARRWKDVARIRRLMKHTGIKKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILA 720

Query: 721 DLIQRIKDMGYIPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIHISKNLR 780
           DLIQRIKDMGY+PQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPI I+KNLR
Sbjct: 721 DLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRINKNLR 780

Query: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 823
           ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW
Sbjct: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 822

BLAST of Sed0001312 vs. ExPASy TrEMBL
Match: A0A6J1CPQ5 (pentatricopeptide repeat-containing protein At5g16860 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111013040 PE=3 SV=1)

HSP 1 Score: 1498.8 bits (3879), Expect = 0.0e+00
Identity = 728/822 (88.56%), Postives = 777/822 (94.53%), Query Frame = 0

Query: 1   MSFLKQCRTLISAKLAHQQILVNGFTDLITYAVGGYIECGAFAQAVLLLERLIPSHSTVF 60
           +S L+QCRTLI+AKLAHQQILVNGFT ++TYA+G YIECGA AQAV LL+RLIPSHSTVF
Sbjct: 31  ISLLQQCRTLINAKLAHQQILVNGFTQMVTYAIGAYIECGASAQAVSLLQRLIPSHSTVF 90

Query: 61  WWNALIRRSVRLVLLDDALGYYCQMQRLGCSPDHYTFPFILKACGEIPSFRWGASVHAIV 120
           WWNALIRRSVRL  LDD LG+YCQMQRLG SPDHYTFPF+LKACGEIPSFR GASVHA+V
Sbjct: 91  WWNALIRRSVRLGFLDDVLGFYCQMQRLGWSPDHYTFPFVLKACGEIPSFRRGASVHAVV 150

Query: 121 CASGFQSNVFICNSMVAMYGRCGALDDARQVFDEVLERKIEDIVSWNSILAAYVQGGKSK 180
           CA+GF+SNVFICNS+VAMYGRCGALDDARQVFDEVLERKIEDIVSWNSILAAYVQGG+SK
Sbjct: 151 CANGFESNVFICNSIVAMYGRCGALDDARQVFDEVLERKIEDIVSWNSILAAYVQGGESK 210

Query: 181 TALKIAFQMAKHYSFELRPDAITLVNILPACASTFASQHGRQVHGFAVRSGLGDDVFVGN 240
           TAL+IA +MA HY+ +L PDAITLVNILPACAST A QHG+QVHG+AVRSGL DDVFVGN
Sbjct: 211 TALRIAVRMANHYNCKLLPDAITLVNILPACASTLAPQHGKQVHGYAVRSGLVDDVFVGN 270

Query: 241 ALVDMYAKCSKMTEANKVFEHMKEKDVVSWNAIVTGYSQIGRFDDALALFQRMQEEDIEL 300
           ALVDMYAKC KM EA++VFE MKEKDVVSWNA+VTGYSQI RFDDAL+LF+RMQEEDIEL
Sbjct: 271 ALVDMYAKCWKMDEASRVFELMKEKDVVSWNAMVTGYSQISRFDDALSLFKRMQEEDIEL 330

Query: 301 NVVTWSAVIAGYAQRGHGFEALDVFRQMQLCGLEPNVITLVSLLSGCASVGALLHGKQTH 360
           NVVTWSA+IAGY+QRG GFEALDVFRQMQLCGLEPNV+TLVSLLSGCASVGALLHGKQTH
Sbjct: 331 NVVTWSALIAGYSQRGLGFEALDVFRQMQLCGLEPNVVTLVSLLSGCASVGALLHGKQTH 390

Query: 361 AYAIKNILKLERSDLGDDLMVINGLIDMYAKCKSSKVARNIFDLITGKDKNVVTWTVMIG 420
           AYAIKNIL  + +D GDDLMV+NGLIDMYAKCKSSKVARNIFDLIT K+KNVVTWTVMIG
Sbjct: 391 AYAIKNILNFDWNDPGDDLMVLNGLIDMYAKCKSSKVARNIFDLITRKNKNVVTWTVMIG 450

Query: 421 GYAQHGEANDAIELFSQMFKQECSLKPNAFTLSCALMACARLGALRLGRQIHAYALRHEN 480
           GYAQHGEANDA+ELFSQMFK E SLKPNAFTLSCALMACARLGALRLGRQIHAYALRHEN
Sbjct: 451 GYAQHGEANDALELFSQMFKHETSLKPNAFTLSCALMACARLGALRLGRQIHAYALRHEN 510

Query: 481 ESEVLYVANCLIDMYSKSGDIDAAQIVFDNMKIQNAVSWTSLMTGYGIHGRGEEALQVFN 540
           E+EVLYVANCLIDMYSKSGDIDAAQ VFDNMK++NAVSWTSLMTGYG+HGRGEEAL +F+
Sbjct: 511 ENEVLYVANCLIDMYSKSGDIDAAQTVFDNMKVRNAVSWTSLMTGYGMHGRGEEALHIFD 570

Query: 541 QMRQVGLAVDGVTFLVVLYACSHSGMVDQGMNYFHGMAKNFGVVPGAEHYACMVDLLGRA 600
           QM+Q  LAVDGVTFLVVLYACSHSGMVDQGMNYFHGM K FGV PGAEHYACMVDLLGRA
Sbjct: 571 QMQQADLAVDGVTFLVVLYACSHSGMVDQGMNYFHGMIKYFGVAPGAEHYACMVDLLGRA 630

Query: 601 GRLDEAMELIESMPMEPTQVVWVALLSSSRTHANVELGEYAASKLIESGLENDGSYTLLS 660
           GRL+EAMELI+SM  EPT VVWVALLS+SR HANVELGEYAA+KLIESGLENDGSYTLLS
Sbjct: 631 GRLNEAMELIKSMSTEPTAVVWVALLSASRIHANVELGEYAANKLIESGLENDGSYTLLS 690

Query: 661 NLYANARRWKDVARIRSLMKHTGIRKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILG 720
           NLYANARRWKDVARIRSLMKHTGI+KRPGCSWVQGKK TTTFFVGD+SHPQSDQIY IL 
Sbjct: 691 NLYANARRWKDVARIRSLMKHTGIKKRPGCSWVQGKKGTTTFFVGDRSHPQSDQIYGILA 750

Query: 721 DLIQRIKDMGYIPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIHISKNLR 780
           DLIQRIKDMGY+PQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTS+PGQPI I+KNLR
Sbjct: 751 DLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSSPGQPIRINKNLR 810

Query: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 823
           ICGDCHSALTYISMIIEHEIILRDSSRFHHFK GSCSCRGYW
Sbjct: 811 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKNGSCSCRGYW 852

BLAST of Sed0001312 vs. ExPASy TrEMBL
Match: A0A1S3C0G3 (pentatricopeptide repeat-containing protein At5g16860 OS=Cucumis melo OX=3656 GN=LOC103495413 PE=3 SV=1)

HSP 1 Score: 1458.4 bits (3774), Expect = 0.0e+00
Identity = 698/822 (84.91%), Postives = 768/822 (93.43%), Query Frame = 0

Query: 1   MSFLKQCRTLISAKLAHQQILVNGFTDLITYAVGGYIECGAFAQAVLLLERLIPSHSTVF 60
           +S L+QC+TLI+AKLAHQQI V+GFT++ +YAVG YIECGA A+AV LL+R+IPSHSTVF
Sbjct: 47  ISLLRQCKTLINAKLAHQQIFVHGFTEMFSYAVGAYIECGASAEAVSLLQRIIPSHSTVF 106

Query: 61  WWNALIRRSVRLVLLDDALGYYCQMQRLGCSPDHYTFPFILKACGEIPSFRWGASVHAIV 120
           WWNALIRRSVRL LLDD LG+YCQMQ LG  PDHYTFPF+LKACGEIPSFR GASVHA+V
Sbjct: 107 WWNALIRRSVRLGLLDDTLGFYCQMQSLGWLPDHYTFPFVLKACGEIPSFRHGASVHAVV 166

Query: 121 CASGFQSNVFICNSMVAMYGRCGALDDARQVFDEVLERKIEDIVSWNSILAAYVQGGKSK 180
           CA GF+SNVFICNS+VAMYGRCGALDDARQ+FDEVLER+IEDIVSWNSILAAYVQGGKS+
Sbjct: 167 CAKGFESNVFICNSIVAMYGRCGALDDARQMFDEVLERRIEDIVSWNSILAAYVQGGKSR 226

Query: 181 TALKIAFQMAKHYSFELRPDAITLVNILPACASTFASQHGRQVHGFAVRSGLGDDVFVGN 240
           TAL+IAFQM  HYS +LRPDAITLVNILPACAS FA QHG+QVHGF+VRSGL DDVFVGN
Sbjct: 227 TALRIAFQMGNHYSLKLRPDAITLVNILPACASIFAIQHGKQVHGFSVRSGLVDDVFVGN 286

Query: 241 ALVDMYAKCSKMTEANKVFEHMKEKDVVSWNAIVTGYSQIGRFDDALALFQRMQEEDIEL 300
           ALV MYAKCSKM EANKVFE +K+KDVVSWNA+VTGYSQIG FD AL+LF+ MQEEDI+L
Sbjct: 287 ALVSMYAKCSKMNEANKVFERIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKL 346

Query: 301 NVVTWSAVIAGYAQRGHGFEALDVFRQMQLCGLEPNVITLVSLLSGCASVGALLHGKQTH 360
           +V+TWSAVIAGYAQ+GHGFEALDVFRQMQL GLEPNV+TLVSLLSGCASVGALL+GKQTH
Sbjct: 347 DVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLVSLLSGCASVGALLYGKQTH 406

Query: 361 AYAIKNILKLERSDLGDDLMVINGLIDMYAKCKSSKVARNIFDLITGKDKNVVTWTVMIG 420
           AY IKNIL L  SD GDD++V+NGLIDMYAKCKS +VARNIFD I GKDK+VVTWTVMIG
Sbjct: 407 AYVIKNILNLNWSDKGDDMLVLNGLIDMYAKCKSYRVARNIFDSIAGKDKDVVTWTVMIG 466

Query: 421 GYAQHGEANDAIELFSQMFKQECSLKPNAFTLSCALMACARLGALRLGRQIHAYALRHEN 480
           GYAQHGEANDA++LF+Q+F+Q+ SLKPNAFTLSCALMACARLG LRLGRQ+HAYALR+EN
Sbjct: 467 GYAQHGEANDALQLFAQIFEQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNEN 526

Query: 481 ESEVLYVANCLIDMYSKSGDIDAAQIVFDNMKIQNAVSWTSLMTGYGIHGRGEEALQVFN 540
           ESEVLYVANCLIDMYSKSGDIDAA+ VF+NMK++N VSWTSLMTGYG+HGRGEEAL VF+
Sbjct: 527 ESEVLYVANCLIDMYSKSGDIDAARAVFNNMKLRNVVSWTSLMTGYGMHGRGEEALHVFD 586

Query: 541 QMRQVGLAVDGVTFLVVLYACSHSGMVDQGMNYFHGMAKNFGVVPGAEHYACMVDLLGRA 600
           QMRQ+G  VDG+TFLVVLYACSHSG+VDQGMNYFH M K FG+ PGAEHYACMVDLLGRA
Sbjct: 587 QMRQLGFVVDGITFLVVLYACSHSGLVDQGMNYFHDMVKCFGITPGAEHYACMVDLLGRA 646

Query: 601 GRLDEAMELIESMPMEPTQVVWVALLSSSRTHANVELGEYAASKLIESGLENDGSYTLLS 660
           GRL+EAMELI+SM MEPT VVWVALLS+SR HAN+ELGEYAASKLIE G ENDGSYTLLS
Sbjct: 647 GRLNEAMELIKSMSMEPTAVVWVALLSASRIHANIELGEYAASKLIELGAENDGSYTLLS 706

Query: 661 NLYANARRWKDVARIRSLMKHTGIRKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILG 720
           NLYANARRWKDVARIRSLMKHTGIRKRPGCSW+QGKKSTTTFFVGD+SHP+S+QIYN+L 
Sbjct: 707 NLYANARRWKDVARIRSLMKHTGIRKRPGCSWIQGKKSTTTFFVGDRSHPESEQIYNLLS 766

Query: 721 DLIQRIKDMGYIPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIHISKNLR 780
           DLI+RIKDMGY+PQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILT+APGQPI I KNLR
Sbjct: 767 DLIKRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTTAPGQPIRIHKNLR 826

Query: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 823
           ICGDCHSALTYISMII+HEIILRDSSRFHHFKKGSCSCR YW
Sbjct: 827 ICGDCHSALTYISMIIDHEIILRDSSRFHHFKKGSCSCRSYW 868

BLAST of Sed0001312 vs. ExPASy TrEMBL
Match: A0A6J1CP62 (pentatricopeptide repeat-containing protein At5g16860 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111013040 PE=3 SV=1)

HSP 1 Score: 1454.9 bits (3765), Expect = 0.0e+00
Identity = 706/795 (88.81%), Postives = 752/795 (94.59%), Query Frame = 0

Query: 28  LITYAVGGYIECGAFAQAVLLLERLIPSHSTVFWWNALIRRSVRLVLLDDALGYYCQMQR 87
           ++TYA+G YIECGA AQAV LL+RLIPSHSTVFWWNALIRRSVRL  LDD LG+YCQMQR
Sbjct: 1   MVTYAIGAYIECGASAQAVSLLQRLIPSHSTVFWWNALIRRSVRLGFLDDVLGFYCQMQR 60

Query: 88  LGCSPDHYTFPFILKACGEIPSFRWGASVHAIVCASGFQSNVFICNSMVAMYGRCGALDD 147
           LG SPDHYTFPF+LKACGEIPSFR GASVHA+VCA+GF+SNVFICNS+VAMYGRCGALDD
Sbjct: 61  LGWSPDHYTFPFVLKACGEIPSFRRGASVHAVVCANGFESNVFICNSIVAMYGRCGALDD 120

Query: 148 ARQVFDEVLERKIEDIVSWNSILAAYVQGGKSKTALKIAFQMAKHYSFELRPDAITLVNI 207
           ARQVFDEVLERKIEDIVSWNSILAAYVQGG+SKTAL+IA +MA HY+ +L PDAITLVNI
Sbjct: 121 ARQVFDEVLERKIEDIVSWNSILAAYVQGGESKTALRIAVRMANHYNCKLLPDAITLVNI 180

Query: 208 LPACASTFASQHGRQVHGFAVRSGLGDDVFVGNALVDMYAKCSKMTEANKVFEHMKEKDV 267
           LPACAST A QHG+QVHG+AVRSGL DDVFVGNALVDMYAKC KM EA++VFE MKEKDV
Sbjct: 181 LPACASTLAPQHGKQVHGYAVRSGLVDDVFVGNALVDMYAKCWKMDEASRVFELMKEKDV 240

Query: 268 VSWNAIVTGYSQIGRFDDALALFQRMQEEDIELNVVTWSAVIAGYAQRGHGFEALDVFRQ 327
           VSWNA+VTGYSQI RFDDAL+LF+RMQEEDIELNVVTWSA+IAGY+QRG GFEALDVFRQ
Sbjct: 241 VSWNAMVTGYSQISRFDDALSLFKRMQEEDIELNVVTWSALIAGYSQRGLGFEALDVFRQ 300

Query: 328 MQLCGLEPNVITLVSLLSGCASVGALLHGKQTHAYAIKNILKLERSDLGDDLMVINGLID 387
           MQLCGLEPNV+TLVSLLSGCASVGALLHGKQTHAYAIKNIL  + +D GDDLMV+NGLID
Sbjct: 301 MQLCGLEPNVVTLVSLLSGCASVGALLHGKQTHAYAIKNILNFDWNDPGDDLMVLNGLID 360

Query: 388 MYAKCKSSKVARNIFDLITGKDKNVVTWTVMIGGYAQHGEANDAIELFSQMFKQECSLKP 447
           MYAKCKSSKVARNIFDLIT K+KNVVTWTVMIGGYAQHGEANDA+ELFSQMFK E SLKP
Sbjct: 361 MYAKCKSSKVARNIFDLITRKNKNVVTWTVMIGGYAQHGEANDALELFSQMFKHETSLKP 420

Query: 448 NAFTLSCALMACARLGALRLGRQIHAYALRHENESEVLYVANCLIDMYSKSGDIDAAQIV 507
           NAFTLSCALMACARLGALRLGRQIHAYALRHENE+EVLYVANCLIDMYSKSGDIDAAQ V
Sbjct: 421 NAFTLSCALMACARLGALRLGRQIHAYALRHENENEVLYVANCLIDMYSKSGDIDAAQTV 480

Query: 508 FDNMKIQNAVSWTSLMTGYGIHGRGEEALQVFNQMRQVGLAVDGVTFLVVLYACSHSGMV 567
           FDNMK++NAVSWTSLMTGYG+HGRGEEAL +F+QM+Q  LAVDGVTFLVVLYACSHSGMV
Sbjct: 481 FDNMKVRNAVSWTSLMTGYGMHGRGEEALHIFDQMQQADLAVDGVTFLVVLYACSHSGMV 540

Query: 568 DQGMNYFHGMAKNFGVVPGAEHYACMVDLLGRAGRLDEAMELIESMPMEPTQVVWVALLS 627
           DQGMNYFHGM K FGV PGAEHYACMVDLLGRAGRL+EAMELI+SM  EPT VVWVALLS
Sbjct: 541 DQGMNYFHGMIKYFGVAPGAEHYACMVDLLGRAGRLNEAMELIKSMSTEPTAVVWVALLS 600

Query: 628 SSRTHANVELGEYAASKLIESGLENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKR 687
           +SR HANVELGEYAA+KLIESGLENDGSYTLLSNLYANARRWKDVARIRSLMKHTGI+KR
Sbjct: 601 ASRIHANVELGEYAANKLIESGLENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIKKR 660

Query: 688 PGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILGDLIQRIKDMGYIPQTSFALHDVDDEEK 747
           PGCSWVQGKK TTTFFVGD+SHPQSDQIY IL DLIQRIKDMGY+PQTSFALHDVDDEEK
Sbjct: 661 PGCSWVQGKKGTTTFFVGDRSHPQSDQIYGILADLIQRIKDMGYVPQTSFALHDVDDEEK 720

Query: 748 GDLLFEHSEKLAVAYGILTSAPGQPIHISKNLRICGDCHSALTYISMIIEHEIILRDSSR 807
           GDLLFEHSEKLAVAYGILTS+PGQPI I+KNLRICGDCHSALTYISMIIEHEIILRDSSR
Sbjct: 721 GDLLFEHSEKLAVAYGILTSSPGQPIRINKNLRICGDCHSALTYISMIIEHEIILRDSSR 780

Query: 808 FHHFKKGSCSCRGYW 823
           FHHFK GSCSCRGYW
Sbjct: 781 FHHFKNGSCSCRGYW 795

BLAST of Sed0001312 vs. TAIR 10
Match: AT5G16860.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 1042.7 bits (2695), Expect = 1.5e-304
Identity = 503/822 (61.19%), Postives = 629/822 (76.52%), Query Frame = 0

Query: 3   FLKQCRTLISAKLAHQQILVNGF--TDLITYAVGGYIECGAFAQAVLLLERLIPSHSTVF 62
           F+ +C+T+   KL HQ++L  G    +L ++ +  YI  G  + AV LL R  PS + V+
Sbjct: 34  FIHKCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVY 93

Query: 63  WWNALIRRSVRLVLLDDALGYYCQMQRLGCSPDHYTFPFILKACGEIPSFRWGASVHAIV 122
            WN+LIR        +  L  +  M  L  +PD+YTFPF+ KACGEI S R G S HA+ 
Sbjct: 94  HWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALS 153

Query: 123 CASGFQSNVFICNSMVAMYGRCGALDDARQVFDEVLERKIEDIVSWNSILAAYVQGGKSK 182
             +GF SNVF+ N++VAMY RC +L DAR+VFDE+    + D+VSWNSI+ +Y + GK K
Sbjct: 154 LVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEM---SVWDVVSWNSIIESYAKLGKPK 213

Query: 183 TALKIAFQMAKHYSFELRPDAITLVNILPACASTFASQHGRQVHGFAVRSGLGDDVFVGN 242
            AL++  +M     F  RPD ITLVN+LP CAS      G+Q+H FAV S +  ++FVGN
Sbjct: 214 VALEMFSRMTN--EFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGN 273

Query: 243 ALVDMYAKCSKMTEANKVFEHMKEKDVVSWNAIVTGYSQIGRFDDALALFQRMQEEDIEL 302
            LVDMYAKC  M EAN VF +M  KDVVSWNA+V GYSQIGRF+DA+ LF++MQEE I++
Sbjct: 274 CLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKM 333

Query: 303 NVVTWSAVIAGYAQRGHGFEALDVFRQMQLCGLEPNVITLVSLLSGCASVGALLHGKQTH 362
           +VVTWSA I+GYAQRG G+EAL V RQM   G++PN +TL+S+LSGCASVGAL+HGK+ H
Sbjct: 334 DVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIH 393

Query: 363 AYAIKNILKLERSDLGDDLMVINGLIDMYAKCKSSKVARNIFDLITGKDKNVVTWTVMIG 422
            YAIK  + L ++  GD+ MVIN LIDMYAKCK    AR +FD ++ K+++VVTWTVMIG
Sbjct: 394 CYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIG 453

Query: 423 GYAQHGEANDAIELFSQMFKQECSLKPNAFTLSCALMACARLGALRLGRQIHAYALRHEN 482
           GY+QHG+AN A+EL S+MF+++C  +PNAFT+SCAL+ACA L ALR+G+QIHAYALR++ 
Sbjct: 454 GYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQ 513

Query: 483 ESEVLYVANCLIDMYSKSGDIDAAQIVFDNMKIQNAVSWTSLMTGYGIHGRGEEALQVFN 542
            +  L+V+NCLIDMY+K G I  A++VFDNM  +N V+WTSLMTGYG+HG GEEAL +F+
Sbjct: 514 NAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFD 573

Query: 543 QMRQVGLAVDGVTFLVVLYACSHSGMVDQGMNYFHGMAKNFGVVPGAEHYACMVDLLGRA 602
           +MR++G  +DGVT LVVLYACSHSGM+DQGM YF+ M   FGV PG EHYAC+VDLLGRA
Sbjct: 574 EMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRA 633

Query: 603 GRLDEAMELIESMPMEPTQVVWVALLSSSRTHANVELGEYAASKLIESGLENDGSYTLLS 662
           GRL+ A+ LIE MPMEP  VVWVA LS  R H  VELGEYAA K+ E    +DGSYTLLS
Sbjct: 634 GRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLS 693

Query: 663 NLYANARRWKDVARIRSLMKHTGIRKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILG 722
           NLYANA RWKDV RIRSLM+H G++KRPGCSWV+G K TTTFFVGDK+HP + +IY +L 
Sbjct: 694 NLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLL 753

Query: 723 DLIQRIKDMGYIPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIHISKNLR 782
           D +QRIKD+GY+P+T FALHDVDDEEK DLLFEHSEKLA+AYGILT+  G  I I+KNLR
Sbjct: 754 DHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLR 813

Query: 783 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 823
           +CGDCH+A TY+S II+H+IILRDSSRFHHFK GSCSC+GYW
Sbjct: 814 VCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850

BLAST of Sed0001312 vs. TAIR 10
Match: AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 560.1 bits (1442), Expect = 3.0e-159
Identity = 292/787 (37.10%), Postives = 447/787 (56.80%), Query Frame = 0

Query: 36  YIECGAFAQAVLLLERLIPSHSTVFWWNALIRRSVRLVLLDDALGYYCQMQRLGCSPDHY 95
           Y  CG   +A  + + +        +WN L+    +      ++G + +M   G   D Y
Sbjct: 139 YTNCGDLKEASRVFDEV--KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSY 198

Query: 96  TFPFILKACGEIPSFRWGASVHAIVCASGFQSNVFICNSMVAMYGRCGALDDARQVFDEV 155
           TF  + K+   + S   G  +H  +  SGF     + NS+VA Y +   +D AR+VFDE+
Sbjct: 199 TFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEM 258

Query: 156 LERKIEDIVSWNSILAAYVQGGKSKTALKIAFQMAKHYSFELRPDAITLVNILPACASTF 215
            ER   D++SWNSI+  YV  G ++  L +  QM       +  D  T+V++   CA + 
Sbjct: 259 TER---DVISWNSIINGYVSNGLAEKGLSVFVQMLVS---GIEIDLATIVSVFAGCADSR 318

Query: 216 ASQHGRQVHGFAVRSGLGDDVFVGNALVDMYAKCSKMTEANKVFEHMKEKDVVSWNAIVT 275
               GR VH   V++    +    N L+DMY+KC  +  A  VF  M ++ VVS+ +++ 
Sbjct: 319 LISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIA 378

Query: 276 GYSQIGRFDDALALFQRMQEEDIELNVVTWSAVIAGYAQRGHGFEALDVFRQMQLCGLEP 335
           GY++ G   +A+ LF+ M+EE                                   G+ P
Sbjct: 379 GYAREGLAGEAVKLFEEMEEE-----------------------------------GISP 438

Query: 336 NVITLVSLLSGCASVGALLHGKQTHAYAIKNILKLERSDLGDDLMVINGLIDMYAKCKSS 395
           +V T+ ++L+ CA    L  GK+ H +       ++ +DLG D+ V N L+DMYAKC S 
Sbjct: 439 DVYTVTAVLNCCARYRLLDEGKRVHEW-------IKENDLGFDIFVSNALMDMYAKCGSM 498

Query: 396 KVARNIFDLITGKDKNVVTWTVMIGGYAQHGEANDAIELFSQMFKQECSLKPNAFTLSCA 455
           + A  +F  +  KD  +++W  +IGGY+++  AN+A+ LF+ +  +E    P+  T++C 
Sbjct: 499 QEAELVFSEMRVKD--IISWNTIIGGYSKNCYANEALSLFN-LLLEEKRFSPDERTVACV 558

Query: 456 LMACARLGALRLGRQIHAYALRHENESEVLYVANCLIDMYSKSGDIDAAQIVFDNMKIQN 515
           L ACA L A   GR+IH Y +R+   S+  +VAN L+DMY+K G +  A ++FD++  ++
Sbjct: 559 LPACASLSAFDKGREIHGYIMRNGYFSD-RHVANSLVDMYAKCGALLLAHMLFDDIASKD 618

Query: 516 AVSWTSLMTGYGIHGRGEEALQVFNQMRQVGLAVDGVTFLVVLYACSHSGMVDQGMNYFH 575
            VSWT ++ GYG+HG G+EA+ +FNQMRQ G+  D ++F+ +LYACSHSG+VD+G  +F+
Sbjct: 619 LVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFN 678

Query: 576 GMAKNFGVVPGAEHYACMVDLLGRAGRLDEAMELIESMPMEPTQVVWVALLSSSRTHANV 635
            M     + P  EHYAC+VD+L R G L +A   IE+MP+ P   +W ALL   R H +V
Sbjct: 679 IMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDV 738

Query: 636 ELGEYAASKLIESGLENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKRPGCSWVQG 695
           +L E  A K+ E   EN G Y L++N+YA A +W+ V R+R  +   G+RK PGCSW++ 
Sbjct: 739 KLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEI 798

Query: 696 KKSTTTFFVGDKSHPQSDQIYNILGDLIQRIKDMGYIPQTSFALHDVDDEEKGDLLFEHS 755
           K     F  GD S+P+++ I   L  +  R+ + GY P T +AL D ++ EK + L  HS
Sbjct: 799 KGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHS 858

Query: 756 EKLAVAYGILTSAPGQPIHISKNLRICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGS 815
           EKLA+A GI++S  G+ I ++KNLR+CGDCH    ++S +   EI+LRDS+RFH FK G 
Sbjct: 859 EKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGH 871

Query: 816 CSCRGYW 823
           CSCRG+W
Sbjct: 919 CSCRGFW 871

BLAST of Sed0001312 vs. TAIR 10
Match: AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 542.7 bits (1397), Expect = 5.0e-154
Identity = 291/822 (35.40%), Postives = 466/822 (56.69%), Query Frame = 0

Query: 4   LKQCRTLISAKLAHQQILVNGFTD---LITYAVGGYIECGAFAQAVLLLERLIPSHSTVF 63
           L++C +L   +     +  NG        T  V  +   G+  +A  + E +    + ++
Sbjct: 44  LERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLY 103

Query: 64  WWNALIRRSVRLVLLDDALGYYCQMQRLGCSPDHYTFPFILKACGEIPSFRWGASVHAIV 123
             + +++   ++  LD AL ++ +M+     P  Y F ++LK CG+    R G  +H ++
Sbjct: 104 --HTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLL 163

Query: 124 CASGFQSNVFICNSMVAMYGRCGALDDARQVFDEVLERKIEDIVSWNSILAAYVQGGKSK 183
             SGF  ++F    +  MY +C  +++AR+VFD + ER   D+VSWN+I+A Y Q G ++
Sbjct: 164 VKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPER---DLVSWNTIVAGYSQNGMAR 223

Query: 184 TALKIAFQMAKHYSFELRPDAITLVNILPACASTFASQHGRQVHGFAVRSGLGDDVFVGN 243
            AL++   M +     L+P  IT+V++LPA ++      G+++HG+A+RSG    V +  
Sbjct: 224 MALEMVKSMCEE---NLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIST 283

Query: 244 ALVDMYAKCSKMTEANKVFEHMKEKDVVSWNAIVTGYSQIGRFDDALALFQRMQEEDIEL 303
           ALVDMYAKC  +  A ++F+ M E++VVSWN+++  Y Q     +A+ +FQ+M +E    
Sbjct: 284 ALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDE---- 343

Query: 304 NVVTWSAVIAGYAQRGHGFEALDVFRQMQLCGLEPNVITLVSLLSGCASVGALLHGKQTH 363
                                          G++P  ++++  L  CA +G L  G+  H
Sbjct: 344 -------------------------------GVKPTDVSVMGALHACADLGDLERGRFIH 403

Query: 364 AYAIKNILKLERSDLGDDLMVINGLIDMYAKCKSSKVARNIFDLITGKDKNVVTWTVMIG 423
             +++  L L+R     ++ V+N LI MY KCK    A ++F  +  + + +V+W  MI 
Sbjct: 404 KLSVE--LGLDR-----NVSVVNSLISMYCKCKEVDTAASMFGKL--QSRTLVSWNAMIL 463

Query: 424 GYAQHGEANDAIELFSQMFKQECSLKPNAFTLSCALMACARLGALRLGRQIHAYALRHEN 483
           G+AQ+G   DA+  FSQM  +  ++KP+ FT    + A A L      + IH   +R   
Sbjct: 464 GFAQNGRPIDALNYFSQM--RSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCL 523

Query: 484 ESEVLYVANCLIDMYSKSGDIDAAQIVFDNMKIQNAVSWTSLMTGYGIHGRGEEALQVFN 543
           +  V +V   L+DMY+K G I  A+++FD M  ++  +W +++ GYG HG G+ AL++F 
Sbjct: 524 DKNV-FVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFE 583

Query: 544 QMRQVGLAVDGVTFLVVLYACSHSGMVDQGMNYFHGMAKNFGVVPGAEHYACMVDLLGRA 603
           +M++  +  +GVTFL V+ ACSHSG+V+ G+  F+ M +N+ +    +HY  MVDLLGRA
Sbjct: 584 EMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRA 643

Query: 604 GRLDEAMELIESMPMEPTQVVWVALLSSSRTHANVELGEYAASKLIESGLENDGSYTLLS 663
           GRL+EA + I  MP++P   V+ A+L + + H NV   E AA +L E   ++ G + LL+
Sbjct: 644 GRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLA 703

Query: 664 NLYANARRWKDVARIRSLMKHTGIRKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILG 723
           N+Y  A  W+ V ++R  M   G+RK PGCS V+ K    +FF G  +HP S +IY  L 
Sbjct: 704 NIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLE 763

Query: 724 DLIQRIKDMGYIPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIHISKNLR 783
            LI  IK+ GY+P T+  L  V+++ K  LL  HSEKLA+++G+L +  G  IH+ KNLR
Sbjct: 764 KLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLR 809

Query: 784 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 823
           +C DCH+A  YIS++   EI++RD  RFHHFK G+CSC  YW
Sbjct: 824 VCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809

BLAST of Sed0001312 vs. TAIR 10
Match: AT1G18485.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 542.0 bits (1395), Expect = 8.5e-154
Identity = 305/866 (35.22%), Postives = 472/866 (54.50%), Query Frame = 0

Query: 28  LITYAVGGYIECGAFAQAVLLLERLIPSHSTVFWWNALIRRSVRLVLLDDALGYYCQM-Q 87
           L T  +  Y  CG+   +  + + L      +F WNA+I    R  L D+ L  + +M  
Sbjct: 122 LCTRIITMYAMCGSPDDSRFVFDAL--RSKNLFQWNAVISSYSRNELYDEVLETFIEMIS 181

Query: 88  RLGCSPDHYTFPFILKACGEIPSFRWGASVHAIVCASGFQSNVFICNSMVAMYGRCGALD 147
                PDH+T+P ++KAC  +     G +VH +V  +G   +VF+ N++V+ YG  G + 
Sbjct: 182 TTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVT 241

Query: 148 DARQVFDEVLERKIEDIVSWNSILAAYVQGGKSKTA-LKIAFQMAKHYSFELRPDAITLV 207
           DA Q+FD + ER   ++VSWNS++  +   G S+ + L +   M ++      PD  TLV
Sbjct: 242 DALQLFDIMPER---NLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLV 301

Query: 208 NILPACASTFASQHGRQVHGFAVRSGLGDDVFVGNALVDMYAKCSKMTEANKVFEHMKEK 267
            +LP CA       G+ VHG+AV+  L  ++ + NAL+DMY+KC  +T A  +F+    K
Sbjct: 302 TVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNK 361

Query: 268 DVVSWNAIVTGYSQIGRFDDALALFQRMQE--EDIELNVVT------------------- 327
           +VVSWN +V G+S  G       + ++M    ED++ + VT                   
Sbjct: 362 NVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKE 421

Query: 328 -----------------------------------------------WSAVIAGYAQRGH 387
                                                          W+A+I G+AQ   
Sbjct: 422 LHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSND 481

Query: 388 GFEALDVFRQMQLCGLEPNVITLVSLLSGCASVGALLHGKQTHAYAIKNILKLERSDLGD 447
              +LD   QM++ GL P+  T+ SLLS C+ + +L  GK+ H + I+N L+        
Sbjct: 482 PRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLE-------R 541

Query: 448 DLMVINGLIDMYAKCKSSKVARNIFDLITGKDKNVVTWTVMIGGYAQHGEANDAIELFSQ 507
           DL V   ++ +Y  C      + +FD +  +DK++V+W  +I GY Q+G  + A+ +F Q
Sbjct: 542 DLFVYLSVLSLYIHCGELCTVQALFDAM--EDKSLVSWNTVITGYLQNGFPDRALGVFRQ 601

Query: 508 MFKQECSLKPNAFTLSCALMACARLGALRLGRQIHAYALRHENESEVLYVANCLIDMYSK 567
           M      L     ++     AC+ L +LRLGR+ HAYAL+H  E +  ++A  LIDMY+K
Sbjct: 602 MVLYGIQL--CGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDA-FIACSLIDMYAK 661

Query: 568 SGDIDAAQIVFDNMKIQNAVSWTSLMTGYGIHGRGEEALQVFNQMRQVGLAVDGVTFLVV 627
           +G I  +  VF+ +K ++  SW +++ GYGIHG  +EA+++F +M++ G   D +TFL V
Sbjct: 662 NGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGV 721

Query: 628 LYACSHSGMVDQGMNYFHGMAKNFGVVPGAEHYACMVDLLGRAGRLDEAMELI-ESMPME 687
           L AC+HSG++ +G+ Y   M  +FG+ P  +HYAC++D+LGRAG+LD+A+ ++ E M  E
Sbjct: 722 LTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEE 781

Query: 688 PTQVVWVALLSSSRTHANVELGEYAASKLIESGLENDGSYTLLSNLYANARRWKDVARIR 747
               +W +LLSS R H N+E+GE  A+KL E   E   +Y LLSNLYA   +W+DV ++R
Sbjct: 782 ADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVR 841

Query: 748 SLMKHTGIRKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILGDLIQRIKDMGYIPQTS 807
             M    +RK  GCSW++  +   +F VG++     ++I ++   L  +I  MGY P T 
Sbjct: 842 QRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTM 901

Query: 808 FALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIHISKNLRICGDCHSALTYISMII 823
              HD+ +EEK + L  HSEKLA+ YG++ ++ G  I + KNLRIC DCH+A   IS ++
Sbjct: 902 SVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVM 961

BLAST of Sed0001312 vs. TAIR 10
Match: AT2G22070.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 533.9 bits (1374), Expect = 2.3e-151
Identity = 281/728 (38.60%), Postives = 429/728 (58.93%), Query Frame = 0

Query: 130 FICNSMVAMYGRCGALDDARQVFDEVLERKIEDIVSWNSILAAYVQGGKSKTALKIAFQM 189
           F  N++++ Y + G +D   + FD++ +R   D VSW +++  Y   G+   A+++   M
Sbjct: 81  FSWNTVLSAYSKRGDMDSTCEFFDQLPQR---DSVSWTTMIVGYKNIGQYHKAIRVMGDM 140

Query: 190 AKHYSFELRPDAITLVNILPACASTFASQHGRQVHGFAVRSGLGDDVFVGNALVDMYAKC 249
            K     + P   TL N+L + A+T   + G++VH F V+ GL  +V V N+L++MYAKC
Sbjct: 141 VKE---GIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKC 200

Query: 250 SKMTEANKVFEHMKEKDVVSWNAIVTGYSQIGRFDDALALFQRMQEEDIELNVVTWSAVI 309
                A  VF+ M  +D+ SWNA++  + Q+G+ D A+A F++M E DI    VTW+++I
Sbjct: 201 GDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI----VTWNSMI 260

Query: 310 AGYAQRGHGFEALDVFRQMQLCG-LEPNVITLVSLLSGCASVGALLHGKQTHAYAIKNIL 369
           +G+ QRG+   ALD+F +M     L P+  TL S+LS CA++  L  GKQ H++ +    
Sbjct: 261 SGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTT-- 320

Query: 370 KLERSDLGDDL--MVINGLIDMYAKCKSSKVARNIFD----------------------- 429
                  G D+  +V+N LI MY++C   + AR + +                       
Sbjct: 321 -------GFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLG 380

Query: 430 --------LITGKDKNVVTWTVMIGGYAQHGEANDAIELFSQMFKQECSLKPNAFTLSCA 489
                    ++ KD++VV WT MI GY QHG   +AI LF  M       +PN++TL+  
Sbjct: 381 DMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGG--GQRPNSYTLAAM 440

Query: 490 LMACARLGALRLGRQIHAYALRHENESEVLYVANCLIDMYSKSGDIDAAQIVFDNMKIQ- 549
           L   + L +L  G+QIH  A++   E   + V+N LI MY+K+G+I +A   FD ++ + 
Sbjct: 441 LSVASSLASLSHGKQIHGSAVK-SGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCER 500

Query: 550 NAVSWTSLMTGYGIHGRGEEALQVFNQMRQVGLAVDGVTFLVVLYACSHSGMVDQGMNYF 609
           + VSWTS++     HG  EEAL++F  M   GL  D +T++ V  AC+H+G+V+QG  YF
Sbjct: 501 DTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYF 560

Query: 610 HGMAKNFGVVPGAEHYACMVDLLGRAGRLDEAMELIESMPMEPTQVVWVALLSSSRTHAN 669
             M     ++P   HYACMVDL GRAG L EA E IE MP+EP  V W +LLS+ R H N
Sbjct: 561 DMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKN 620

Query: 670 VELGEYAASKLIESGLENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKRPGCSWVQ 729
           ++LG+ AA +L+    EN G+Y+ L+NLY+   +W++ A+IR  MK   ++K  G SW++
Sbjct: 621 IDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIE 680

Query: 730 GKKSTTTFFVGDKSHPQSDQIYNILGDLIQRIKDMGYIPQTSFALHDVDDEEKGDLLFEH 789
            K     F V D +HP+ ++IY  +  +   IK MGY+P T+  LHD+++E K  +L  H
Sbjct: 681 VKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHH 740

Query: 790 SEKLAVAYGILTSAPGQPIHISKNLRICGDCHSALTYISMIIEHEIILRDSSRFHHFKKG 823
           SEKLA+A+G++++     + I KNLR+C DCH+A+ +IS ++  EII+RD++RFHHFK G
Sbjct: 741 SEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDG 786

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022960463.10.0e+0090.75pentatricopeptide repeat-containing protein At5g16860 [Cucurbita moschata][more]
XP_023514147.10.0e+0090.75pentatricopeptide repeat-containing protein At5g16860 [Cucurbita pepo subsp. pep... [more]
XP_023004455.10.0e+0090.63pentatricopeptide repeat-containing protein At5g16860 [Cucurbita maxima] >XP_023... [more]
KAG7025541.10.0e+0090.51Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
KAG6593141.10.0e+0090.51Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
Match NameE-valueIdentityDescription
Q9LFL52.2e-30361.19Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana OX... [more]
Q9SN394.2e-15837.10Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... [more]
Q3E6Q17.0e-15335.40Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... [more]
Q0WN601.2e-15235.22Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana OX... [more]
Q9SHZ83.3e-15038.60Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A6J1H9120.0e+0090.75pentatricopeptide repeat-containing protein At5g16860 OS=Cucurbita moschata OX=3... [more]
A0A6J1KUL70.0e+0090.63pentatricopeptide repeat-containing protein At5g16860 OS=Cucurbita maxima OX=366... [more]
A0A6J1CPQ50.0e+0088.56pentatricopeptide repeat-containing protein At5g16860 isoform X1 OS=Momordica ch... [more]
A0A1S3C0G30.0e+0084.91pentatricopeptide repeat-containing protein At5g16860 OS=Cucumis melo OX=3656 GN... [more]
A0A6J1CP620.0e+0088.81pentatricopeptide repeat-containing protein At5g16860 isoform X2 OS=Momordica ch... [more]
Match NameE-valueIdentityDescription
AT5G16860.11.5e-30461.19Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G18750.13.0e-15937.10Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G11290.15.0e-15435.40Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G18485.18.5e-15435.22Pentatricopeptide repeat (PPR) superfamily protein [more]
AT2G22070.12.3e-15138.60pentatricopeptide (PPR) repeat-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 268..298
e-value: 5.4E-7
score: 29.4
coord: 489..512
e-value: 0.0062
score: 16.7
coord: 62..90
e-value: 0.14
score: 12.5
coord: 590..614
e-value: 0.0035
score: 17.5
coord: 240..267
e-value: 0.001
score: 19.2
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 515..562
e-value: 5.3E-9
score: 36.2
coord: 301..348
e-value: 5.0E-11
score: 42.6
coord: 410..460
e-value: 2.1E-10
score: 40.7
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 122..174
e-value: 3.3E-4
score: 20.7
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 131..161
e-value: 0.0015
score: 16.5
coord: 240..268
e-value: 0.0022
score: 16.0
coord: 268..302
e-value: 1.8E-8
score: 32.0
coord: 303..337
e-value: 1.1E-7
score: 29.6
coord: 62..93
e-value: 0.0024
score: 15.9
coord: 413..444
e-value: 2.1E-6
score: 25.5
coord: 590..613
e-value: 8.0E-4
score: 17.4
coord: 517..550
e-value: 8.7E-7
score: 26.7
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 266..300
score: 12.561707
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 515..549
score: 11.377887
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 235..265
score: 8.988323
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 58..92
score: 8.747175
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 301..335
score: 11.761533
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 411..445
score: 11.41077
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 128..162
score: 10.380408
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 486..709
e-value: 3.4E-40
score: 140.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 115..220
e-value: 9.7E-19
score: 69.4
coord: 221..363
e-value: 9.4E-36
score: 124.9
coord: 8..110
e-value: 1.3E-8
score: 36.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 364..485
e-value: 9.1E-19
score: 70.0
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 129..509
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 688..812
e-value: 1.2E-49
score: 167.4
NoneNo IPR availablePANTHERPTHR47929:SF20BNACNNG07920D PROTEINcoord: 3..190
NoneNo IPR availablePANTHERPTHR47929:SF20BNACNNG07920D PROTEINcoord: 197..736
NoneNo IPR availablePANTHERPTHR47929:SF20BNACNNG07920D PROTEINcoord: 162..304
NoneNo IPR availablePANTHERPTHR47929FAMILY NOT NAMEDcoord: 3..190
NoneNo IPR availablePANTHERPTHR47929FAMILY NOT NAMEDcoord: 197..736
NoneNo IPR availablePANTHERPTHR47929FAMILY NOT NAMEDcoord: 162..304

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0001312.1Sed0001312.1mRNA
Sed0001312.2Sed0001312.2mRNA
Sed0001312.3Sed0001312.3mRNA
Sed0001312.4Sed0001312.4mRNA
Sed0001312.5Sed0001312.5mRNA
Sed0001312.6Sed0001312.6mRNA
Sed0001312.7Sed0001312.7mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding