Homology
BLAST of Sed0001312 vs. NCBI nr
Match:
XP_022960463.1 (pentatricopeptide repeat-containing protein At5g16860 [Cucurbita moschata])
HSP 1 Score: 1531.5 bits (3964), Expect = 0.0e+00
Identity = 746/822 (90.75%), Postives = 784/822 (95.38%), Query Frame = 0
Query: 1 MSFLKQCRTLISAKLAHQQILVNGFTDLITYAVGGYIECGAFAQAVLLLERLIPSHSTVF 60
MSFLKQCRTLI AKL HQQILVNGFTDL+T+A+GGYIEC AF QAV LLERL+PSHSTVF
Sbjct: 1 MSFLKQCRTLIDAKLVHQQILVNGFTDLVTHAIGGYIECNAFGQAVSLLERLVPSHSTVF 60
Query: 61 WWNALIRRSVRLVLLDDALGYYCQMQRLGCSPDHYTFPFILKACGEIPSFRWGASVHAIV 120
WWNALIRRSVRL LDDAL +Y QMQRLG PDHYTFPF+LKACGE SFR G SVHA+V
Sbjct: 61 WWNALIRRSVRLGFLDDALCFYRQMQRLGWWPDHYTFPFVLKACGEKLSFRCGTSVHAMV 120
Query: 121 CASGFQSNVFICNSMVAMYGRCGALDDARQVFDEVLERKIEDIVSWNSILAAYVQGGKSK 180
CA GF+SNVFICNS+VAMYGRCGALDDARQVFDEVLERKI+DIVSWNSILAAYVQGG+SK
Sbjct: 121 CAYGFESNVFICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQGGESK 180
Query: 181 TALKIAFQMAKHYSFELRPDAITLVNILPACASTFASQHGRQVHGFAVRSGLGDDVFVGN 240
AL+IAFQMAKHY+F+LRPDAITLVN+LPACASTFA+QHGRQVHGFAVRSGL DDVFVGN
Sbjct: 181 AALRIAFQMAKHYNFKLRPDAITLVNVLPACASTFATQHGRQVHGFAVRSGLVDDVFVGN 240
Query: 241 ALVDMYAKCSKMTEANKVFEHMKEKDVVSWNAIVTGYSQIGRFDDALALFQRMQEEDIEL 300
ALVDMYAKCSKM EANKVFE MKEKDVVSWNA+VTGYSQIG FDDAL+LF+RMQEEDIEL
Sbjct: 241 ALVDMYAKCSKMNEANKVFEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQEEDIEL 300
Query: 301 NVVTWSAVIAGYAQRGHGFEALDVFRQMQLCGLEPNVITLVSLLSGCASVGALLHGKQTH 360
NVVTWSAVIAGY+QRGHG EALDVFRQMQ CGLEPNV+TLVSLLSGCASVGALLHGKQTH
Sbjct: 301 NVVTWSAVIAGYSQRGHGCEALDVFRQMQHCGLEPNVVTLVSLLSGCASVGALLHGKQTH 360
Query: 361 AYAIKNILKLERSDLGDDLMVINGLIDMYAKCKSSKVARNIFDLITGKDKNVVTWTVMIG 420
AYAIKNIL L+ SD GDD+MV NGLIDMYAKCKSS+VARNIFD I GKDKNVVTWTVMIG
Sbjct: 361 AYAIKNILNLDWSDPGDDMMVFNGLIDMYAKCKSSRVARNIFDSIIGKDKNVVTWTVMIG 420
Query: 421 GYAQHGEANDAIELFSQMFKQECSLKPNAFTLSCALMACARLGALRLGRQIHAYALRHEN 480
GYAQHGEANDA+ELFSQMFKQE SLKPNAFTLSCALMACARLGALRLG+QIHAYALRHEN
Sbjct: 421 GYAQHGEANDAVELFSQMFKQETSLKPNAFTLSCALMACARLGALRLGKQIHAYALRHEN 480
Query: 481 ESEVLYVANCLIDMYSKSGDIDAAQIVFDNMKIQNAVSWTSLMTGYGIHGRGEEALQVFN 540
ESEVL+VANCLIDMYSKSGDIDAAQIVFDNMK++NAVSWTSLMTGYGIHGRGEEAL+VFN
Sbjct: 481 ESEVLHVANCLIDMYSKSGDIDAAQIVFDNMKVRNAVSWTSLMTGYGIHGRGEEALRVFN 540
Query: 541 QMRQVGLAVDGVTFLVVLYACSHSGMVDQGMNYFHGMAKNFGVVPGAEHYACMVDLLGRA 600
QMRQVGL+VDGVTFLVVLYACSHSGMVDQGMNYFHGM K FGV PGAEHYACMVDLLGRA
Sbjct: 541 QMRQVGLSVDGVTFLVVLYACSHSGMVDQGMNYFHGMVKYFGVAPGAEHYACMVDLLGRA 600
Query: 601 GRLDEAMELIESMPMEPTQVVWVALLSSSRTHANVELGEYAASKLIESGLENDGSYTLLS 660
GRL+EAMELI+SMPMEPT VVWVALLS+SRTHANVELGEYAASKL+ESG ENDGSYTLLS
Sbjct: 601 GRLNEAMELIKSMPMEPTPVVWVALLSASRTHANVELGEYAASKLMESGAENDGSYTLLS 660
Query: 661 NLYANARRWKDVARIRSLMKHTGIRKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILG 720
NLYANARRWKDVARIR LMKHTGI+KRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNIL
Sbjct: 661 NLYANARRWKDVARIRRLMKHTGIKKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILS 720
Query: 721 DLIQRIKDMGYIPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIHISKNLR 780
DLIQRIKDMGY+PQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPI I+KNLR
Sbjct: 721 DLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRINKNLR 780
Query: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 823
ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW
Sbjct: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 822
BLAST of Sed0001312 vs. NCBI nr
Match:
XP_023514147.1 (pentatricopeptide repeat-containing protein At5g16860 [Cucurbita pepo subsp. pepo] >XP_023514148.1 pentatricopeptide repeat-containing protein At5g16860 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1531.5 bits (3964), Expect = 0.0e+00
Identity = 746/822 (90.75%), Postives = 783/822 (95.26%), Query Frame = 0
Query: 1 MSFLKQCRTLISAKLAHQQILVNGFTDLITYAVGGYIECGAFAQAVLLLERLIPSHSTVF 60
MSFLKQCRTLI AKL HQQILVNGFTDL+T+A+GGYIEC AF QAV LLERL+PSHSTVF
Sbjct: 1 MSFLKQCRTLIDAKLVHQQILVNGFTDLVTHAIGGYIECNAFGQAVSLLERLVPSHSTVF 60
Query: 61 WWNALIRRSVRLVLLDDALGYYCQMQRLGCSPDHYTFPFILKACGEIPSFRWGASVHAIV 120
WWNALIRRSVRL LDD+L +Y QMQRLG PDHYTFPF+LKACGE SFR G SVHA+V
Sbjct: 61 WWNALIRRSVRLGFLDDSLCFYRQMQRLGWLPDHYTFPFVLKACGEKLSFRCGTSVHAMV 120
Query: 121 CASGFQSNVFICNSMVAMYGRCGALDDARQVFDEVLERKIEDIVSWNSILAAYVQGGKSK 180
CA GF+SNVFICNS+VAMYGRCGALDDARQVFDEVLERKI+DIVSWNSILAAYVQGG+SK
Sbjct: 121 CAYGFESNVFICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQGGESK 180
Query: 181 TALKIAFQMAKHYSFELRPDAITLVNILPACASTFASQHGRQVHGFAVRSGLGDDVFVGN 240
AL+IAFQMAKHY+F LRPDAITLVN+LPACASTFA+QHGRQVHGFAVRSGL DDVFVGN
Sbjct: 181 AALRIAFQMAKHYNFRLRPDAITLVNVLPACASTFATQHGRQVHGFAVRSGLVDDVFVGN 240
Query: 241 ALVDMYAKCSKMTEANKVFEHMKEKDVVSWNAIVTGYSQIGRFDDALALFQRMQEEDIEL 300
ALVDMYAKCSKM EANKVFE MKEKDVVSWNA+VTGYSQIG FDDAL+LF+RMQEEDIEL
Sbjct: 241 ALVDMYAKCSKMNEANKVFEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQEEDIEL 300
Query: 301 NVVTWSAVIAGYAQRGHGFEALDVFRQMQLCGLEPNVITLVSLLSGCASVGALLHGKQTH 360
NVVTWSAVIAGY+QRGHG EALDVFRQMQ CGLEPNV+TLVSLLSGCASVGALLHGKQTH
Sbjct: 301 NVVTWSAVIAGYSQRGHGCEALDVFRQMQHCGLEPNVVTLVSLLSGCASVGALLHGKQTH 360
Query: 361 AYAIKNILKLERSDLGDDLMVINGLIDMYAKCKSSKVARNIFDLITGKDKNVVTWTVMIG 420
AYAIKNIL L+ SD GDD+MV NGLIDMYAKCKSS+VARNIFD I GKDKNVVTWTVMIG
Sbjct: 361 AYAIKNILNLDWSDPGDDMMVFNGLIDMYAKCKSSRVARNIFDSIIGKDKNVVTWTVMIG 420
Query: 421 GYAQHGEANDAIELFSQMFKQECSLKPNAFTLSCALMACARLGALRLGRQIHAYALRHEN 480
GYAQHGEANDA+ELFSQMFKQE SLKPNAFTLSCALMACARLGALRLG+QIHAYALRHEN
Sbjct: 421 GYAQHGEANDAVELFSQMFKQETSLKPNAFTLSCALMACARLGALRLGKQIHAYALRHEN 480
Query: 481 ESEVLYVANCLIDMYSKSGDIDAAQIVFDNMKIQNAVSWTSLMTGYGIHGRGEEALQVFN 540
ESEVL+VANCLIDMYSKSGDIDAAQIVFDNMK++NAVSWTSLMTGYGIHGRGEEAL+VFN
Sbjct: 481 ESEVLHVANCLIDMYSKSGDIDAAQIVFDNMKVRNAVSWTSLMTGYGIHGRGEEALRVFN 540
Query: 541 QMRQVGLAVDGVTFLVVLYACSHSGMVDQGMNYFHGMAKNFGVVPGAEHYACMVDLLGRA 600
QMRQVGL+VDGVTFLVVLYACSHSGMVDQGMNYFHGM K FGV PGAEHYACMVDLLGRA
Sbjct: 541 QMRQVGLSVDGVTFLVVLYACSHSGMVDQGMNYFHGMVKYFGVAPGAEHYACMVDLLGRA 600
Query: 601 GRLDEAMELIESMPMEPTQVVWVALLSSSRTHANVELGEYAASKLIESGLENDGSYTLLS 660
GRL+EAMELI+SMPMEPT VVWVALLS+SRTHANVELGEYAASKLIESG ENDGSYTLLS
Sbjct: 601 GRLNEAMELIKSMPMEPTPVVWVALLSASRTHANVELGEYAASKLIESGAENDGSYTLLS 660
Query: 661 NLYANARRWKDVARIRSLMKHTGIRKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILG 720
NLYANARRWKDVARIR LMKHTGI+KRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNIL
Sbjct: 661 NLYANARRWKDVARIRRLMKHTGIKKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILS 720
Query: 721 DLIQRIKDMGYIPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIHISKNLR 780
DLIQRIKDMGY+PQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPI I+KNLR
Sbjct: 721 DLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRINKNLR 780
Query: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 823
ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW
Sbjct: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 822
BLAST of Sed0001312 vs. NCBI nr
Match:
XP_023004455.1 (pentatricopeptide repeat-containing protein At5g16860 [Cucurbita maxima] >XP_023004456.1 pentatricopeptide repeat-containing protein At5g16860 [Cucurbita maxima])
HSP 1 Score: 1528.5 bits (3956), Expect = 0.0e+00
Identity = 745/822 (90.63%), Postives = 785/822 (95.50%), Query Frame = 0
Query: 1 MSFLKQCRTLISAKLAHQQILVNGFTDLITYAVGGYIECGAFAQAVLLLERLIPSHSTVF 60
MSFLKQCRTLI AKL HQQILVNGFTDL+T+A+GGYIEC AFAQAV LLERL+PSHS VF
Sbjct: 1 MSFLKQCRTLIDAKLVHQQILVNGFTDLVTHAIGGYIECNAFAQAVSLLERLVPSHSAVF 60
Query: 61 WWNALIRRSVRLVLLDDALGYYCQMQRLGCSPDHYTFPFILKACGEIPSFRWGASVHAIV 120
WWNALIRRSVRL LDDAL +Y QM+RLG SPD+YTFPF+LKACGE SFR GASVHA+V
Sbjct: 61 WWNALIRRSVRLGFLDDALCFYRQMERLGWSPDYYTFPFVLKACGEKLSFRCGASVHAMV 120
Query: 121 CASGFQSNVFICNSMVAMYGRCGALDDARQVFDEVLERKIEDIVSWNSILAAYVQGGKSK 180
CA GF+SNVFICNS+VAMYGRCGALDDARQVFDEVLERKI+DIVSWNSILAAYVQGG+SK
Sbjct: 121 CAYGFESNVFICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQGGESK 180
Query: 181 TALKIAFQMAKHYSFELRPDAITLVNILPACASTFASQHGRQVHGFAVRSGLGDDVFVGN 240
AL+IAFQMAKHY+F+L PDAITLVN+LPACASTFA++HGRQVHGFAVRSGL DDVFVGN
Sbjct: 181 AALRIAFQMAKHYNFKLFPDAITLVNVLPACASTFATEHGRQVHGFAVRSGLVDDVFVGN 240
Query: 241 ALVDMYAKCSKMTEANKVFEHMKEKDVVSWNAIVTGYSQIGRFDDALALFQRMQEEDIEL 300
ALVDMYAKCSKM EANK+FE MKEKDVVSWNA+VTGYSQIG FDDAL+LF+RMQEEDIEL
Sbjct: 241 ALVDMYAKCSKMNEANKMFEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQEEDIEL 300
Query: 301 NVVTWSAVIAGYAQRGHGFEALDVFRQMQLCGLEPNVITLVSLLSGCASVGALLHGKQTH 360
NVVTWSAVIAGY+QRGHG EALDVFRQMQ CGLEPNV+TLVSLLSGCASVGALLHGKQTH
Sbjct: 301 NVVTWSAVIAGYSQRGHGCEALDVFRQMQNCGLEPNVVTLVSLLSGCASVGALLHGKQTH 360
Query: 361 AYAIKNILKLERSDLGDDLMVINGLIDMYAKCKSSKVARNIFDLITGKDKNVVTWTVMIG 420
AYAIKNIL L+ SD GDD+MV NGLIDMYAKCKSS+VAR+IFD I GKDKNVVTWTVMIG
Sbjct: 361 AYAIKNILNLDWSDPGDDMMVFNGLIDMYAKCKSSRVARSIFDSIIGKDKNVVTWTVMIG 420
Query: 421 GYAQHGEANDAIELFSQMFKQECSLKPNAFTLSCALMACARLGALRLGRQIHAYALRHEN 480
GYAQHGEANDAIELFSQMFKQE SLKPNAFTLSCALMACARLGALRLG+QIHAYALRHEN
Sbjct: 421 GYAQHGEANDAIELFSQMFKQETSLKPNAFTLSCALMACARLGALRLGKQIHAYALRHEN 480
Query: 481 ESEVLYVANCLIDMYSKSGDIDAAQIVFDNMKIQNAVSWTSLMTGYGIHGRGEEALQVFN 540
ESEVLYVANCLIDMYSKSGDIDAAQIVFDNMK+QNAVSWTSLMTGYGIHGRGEEAL+VFN
Sbjct: 481 ESEVLYVANCLIDMYSKSGDIDAAQIVFDNMKVQNAVSWTSLMTGYGIHGRGEEALRVFN 540
Query: 541 QMRQVGLAVDGVTFLVVLYACSHSGMVDQGMNYFHGMAKNFGVVPGAEHYACMVDLLGRA 600
QMR+VGL+VDGVTFLVVLYACSHSGMVDQGMNYFHGM K FGV PGAEHYACMVDLLGRA
Sbjct: 541 QMREVGLSVDGVTFLVVLYACSHSGMVDQGMNYFHGMVKYFGVAPGAEHYACMVDLLGRA 600
Query: 601 GRLDEAMELIESMPMEPTQVVWVALLSSSRTHANVELGEYAASKLIESGLENDGSYTLLS 660
GRL+EAMELI+SMPMEPT VVWVALLS+SRTHANVELGEYAASKLIESG ENDGSYTLLS
Sbjct: 601 GRLNEAMELIKSMPMEPTPVVWVALLSASRTHANVELGEYAASKLIESGAENDGSYTLLS 660
Query: 661 NLYANARRWKDVARIRSLMKHTGIRKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILG 720
NLYANARRWKDVARIR LMKHTGI+KRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNIL
Sbjct: 661 NLYANARRWKDVARIRRLMKHTGIKKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILA 720
Query: 721 DLIQRIKDMGYIPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIHISKNLR 780
DLIQRIKDMGY+PQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPI I+KNLR
Sbjct: 721 DLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRINKNLR 780
Query: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 823
ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW
Sbjct: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 822
BLAST of Sed0001312 vs. NCBI nr
Match:
KAG7025541.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1528.5 bits (3956), Expect = 0.0e+00
Identity = 744/822 (90.51%), Postives = 784/822 (95.38%), Query Frame = 0
Query: 1 MSFLKQCRTLISAKLAHQQILVNGFTDLITYAVGGYIECGAFAQAVLLLERLIPSHSTVF 60
MSFLK+CRTLI AKL HQQILVNGFT+L+T+A+GGYIEC AF QAV LLERL+PSHSTVF
Sbjct: 1 MSFLKRCRTLIDAKLVHQQILVNGFTNLVTHAIGGYIECNAFGQAVSLLERLVPSHSTVF 60
Query: 61 WWNALIRRSVRLVLLDDALGYYCQMQRLGCSPDHYTFPFILKACGEIPSFRWGASVHAIV 120
WWNALIRRSVRL LDDAL +Y QMQRLG PDHYTFPF+LKACGE SFR G SVHA+V
Sbjct: 61 WWNALIRRSVRLGFLDDALCFYRQMQRLGWWPDHYTFPFVLKACGEKLSFRCGTSVHAMV 120
Query: 121 CASGFQSNVFICNSMVAMYGRCGALDDARQVFDEVLERKIEDIVSWNSILAAYVQGGKSK 180
CA GF+SNVFICNS+VAMYGRCGALDDARQVFDEVLERKI+DIVSWNSILAAYVQGG+SK
Sbjct: 121 CAYGFESNVFICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQGGESK 180
Query: 181 TALKIAFQMAKHYSFELRPDAITLVNILPACASTFASQHGRQVHGFAVRSGLGDDVFVGN 240
AL+IAFQMAKHY+F+LRPDAITLVN+LPACASTFA+QHGRQVHGFAVRSGL DDVFVGN
Sbjct: 181 AALRIAFQMAKHYNFKLRPDAITLVNVLPACASTFATQHGRQVHGFAVRSGLVDDVFVGN 240
Query: 241 ALVDMYAKCSKMTEANKVFEHMKEKDVVSWNAIVTGYSQIGRFDDALALFQRMQEEDIEL 300
ALVDMYAKCSKM EANKVFE MKEKDVVSWNA+VTGYSQIG FDDAL+LF+RMQEEDIEL
Sbjct: 241 ALVDMYAKCSKMNEANKVFEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQEEDIEL 300
Query: 301 NVVTWSAVIAGYAQRGHGFEALDVFRQMQLCGLEPNVITLVSLLSGCASVGALLHGKQTH 360
NVVTWSAVIAGY+QRGHG EALDVFRQMQ CGLEPNV+TLVSLLSGCASVGALLHGKQTH
Sbjct: 301 NVVTWSAVIAGYSQRGHGCEALDVFRQMQHCGLEPNVVTLVSLLSGCASVGALLHGKQTH 360
Query: 361 AYAIKNILKLERSDLGDDLMVINGLIDMYAKCKSSKVARNIFDLITGKDKNVVTWTVMIG 420
AYAIKNIL L+ SD GDD+MV NGLIDMYAKCKSS+VARNIFD I GKDKNVVTWTVMIG
Sbjct: 361 AYAIKNILNLDWSDPGDDMMVFNGLIDMYAKCKSSRVARNIFDSIIGKDKNVVTWTVMIG 420
Query: 421 GYAQHGEANDAIELFSQMFKQECSLKPNAFTLSCALMACARLGALRLGRQIHAYALRHEN 480
GYAQHGEANDA+ELFSQMFKQE SLKPNAFTLSCALMACARLGALRLG+QIHAYALRHEN
Sbjct: 421 GYAQHGEANDAVELFSQMFKQETSLKPNAFTLSCALMACARLGALRLGKQIHAYALRHEN 480
Query: 481 ESEVLYVANCLIDMYSKSGDIDAAQIVFDNMKIQNAVSWTSLMTGYGIHGRGEEALQVFN 540
ESEVL+VANCLIDMYSKSGDIDAAQIVFDNMK++NAVSWTSLMTGYGIHGRGEEAL+VFN
Sbjct: 481 ESEVLHVANCLIDMYSKSGDIDAAQIVFDNMKVRNAVSWTSLMTGYGIHGRGEEALRVFN 540
Query: 541 QMRQVGLAVDGVTFLVVLYACSHSGMVDQGMNYFHGMAKNFGVVPGAEHYACMVDLLGRA 600
QMRQVGL+VDGVTFLVVLYACSHSGMVDQGMNYFHGM K FGV PGAEHYACMVDLLGRA
Sbjct: 541 QMRQVGLSVDGVTFLVVLYACSHSGMVDQGMNYFHGMVKCFGVAPGAEHYACMVDLLGRA 600
Query: 601 GRLDEAMELIESMPMEPTQVVWVALLSSSRTHANVELGEYAASKLIESGLENDGSYTLLS 660
GRL+EAMELI+SMPMEPT VVWVALLS+SRTHANVELGEYAASKLIESG ENDGSYTLLS
Sbjct: 601 GRLNEAMELIKSMPMEPTPVVWVALLSASRTHANVELGEYAASKLIESGAENDGSYTLLS 660
Query: 661 NLYANARRWKDVARIRSLMKHTGIRKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILG 720
NLYANARRWKDVARIR LMKHTGI+KRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNIL
Sbjct: 661 NLYANARRWKDVARIRRLMKHTGIKKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILS 720
Query: 721 DLIQRIKDMGYIPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIHISKNLR 780
DLIQRIKDMGY+PQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPI ++KNLR
Sbjct: 721 DLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRVNKNLR 780
Query: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 823
ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW
Sbjct: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 822
BLAST of Sed0001312 vs. NCBI nr
Match:
KAG6593141.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1528.5 bits (3956), Expect = 0.0e+00
Identity = 744/822 (90.51%), Postives = 783/822 (95.26%), Query Frame = 0
Query: 1 MSFLKQCRTLISAKLAHQQILVNGFTDLITYAVGGYIECGAFAQAVLLLERLIPSHSTVF 60
MSFLK+CRTLI AKL HQQILVNGFTDL+T+A+GGYIEC AF QAV LLERL+PSHSTVF
Sbjct: 1 MSFLKRCRTLIDAKLVHQQILVNGFTDLVTHAIGGYIECNAFGQAVSLLERLVPSHSTVF 60
Query: 61 WWNALIRRSVRLVLLDDALGYYCQMQRLGCSPDHYTFPFILKACGEIPSFRWGASVHAIV 120
WWNALIRRSVRL LDDAL +Y QMQRLG PDHYTFPF+LKACGE SFR G SVHA+V
Sbjct: 61 WWNALIRRSVRLGFLDDALCFYRQMQRLGWWPDHYTFPFVLKACGEKLSFRCGTSVHAMV 120
Query: 121 CASGFQSNVFICNSMVAMYGRCGALDDARQVFDEVLERKIEDIVSWNSILAAYVQGGKSK 180
CA GF+SNVFICNS+VAMYGRCGALDDARQVFDEVLERKI+DIVSWNSILAAYVQGG+SK
Sbjct: 121 CAYGFESNVFICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQGGESK 180
Query: 181 TALKIAFQMAKHYSFELRPDAITLVNILPACASTFASQHGRQVHGFAVRSGLGDDVFVGN 240
AL+IAFQMAKHY+F+LRPDAITLVN+LPACASTFA+QHGRQVHGFAVRSGL DDVFVGN
Sbjct: 181 AALRIAFQMAKHYNFKLRPDAITLVNVLPACASTFATQHGRQVHGFAVRSGLVDDVFVGN 240
Query: 241 ALVDMYAKCSKMTEANKVFEHMKEKDVVSWNAIVTGYSQIGRFDDALALFQRMQEEDIEL 300
ALVDMYAKCSKM EANKVFE MKEKDVVSWNA+VTGYSQIG FDDAL+LF+RMQEEDIEL
Sbjct: 241 ALVDMYAKCSKMNEANKVFEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQEEDIEL 300
Query: 301 NVVTWSAVIAGYAQRGHGFEALDVFRQMQLCGLEPNVITLVSLLSGCASVGALLHGKQTH 360
NVVTWSAVIAGY+QRGHG EALDVFRQMQ CGLEPNV+TLVSLLSGCASVGALLHGKQTH
Sbjct: 301 NVVTWSAVIAGYSQRGHGCEALDVFRQMQHCGLEPNVVTLVSLLSGCASVGALLHGKQTH 360
Query: 361 AYAIKNILKLERSDLGDDLMVINGLIDMYAKCKSSKVARNIFDLITGKDKNVVTWTVMIG 420
AYAIKNIL L+ SD GDD+MV NGLIDMYAKCKSS+VARNIFD I GKDKNVVTWTVMIG
Sbjct: 361 AYAIKNILNLDWSDPGDDMMVFNGLIDMYAKCKSSRVARNIFDSIIGKDKNVVTWTVMIG 420
Query: 421 GYAQHGEANDAIELFSQMFKQECSLKPNAFTLSCALMACARLGALRLGRQIHAYALRHEN 480
GYAQHGEANDA+ELFSQMFKQE SLKPNAFTLSCALMACARLGALRLG+QIHAY LRHEN
Sbjct: 421 GYAQHGEANDAVELFSQMFKQETSLKPNAFTLSCALMACARLGALRLGKQIHAYTLRHEN 480
Query: 481 ESEVLYVANCLIDMYSKSGDIDAAQIVFDNMKIQNAVSWTSLMTGYGIHGRGEEALQVFN 540
ESEVL+VANCLIDMYSKSGDIDAAQIVFDNMK++NAVSWTSLMTGYGIHGRGEEAL+VFN
Sbjct: 481 ESEVLHVANCLIDMYSKSGDIDAAQIVFDNMKVRNAVSWTSLMTGYGIHGRGEEALRVFN 540
Query: 541 QMRQVGLAVDGVTFLVVLYACSHSGMVDQGMNYFHGMAKNFGVVPGAEHYACMVDLLGRA 600
QMRQVGL+VDGVTFLVVLYACSHSGMVDQGMNYFHGM K FGV PGAEHYACMVDLLGRA
Sbjct: 541 QMRQVGLSVDGVTFLVVLYACSHSGMVDQGMNYFHGMVKYFGVAPGAEHYACMVDLLGRA 600
Query: 601 GRLDEAMELIESMPMEPTQVVWVALLSSSRTHANVELGEYAASKLIESGLENDGSYTLLS 660
GRL+EAMELI+SMPMEPT VVWVALLS+SRTHANVELGEYAASKL+ESG ENDGSYTLLS
Sbjct: 601 GRLNEAMELIKSMPMEPTPVVWVALLSASRTHANVELGEYAASKLMESGAENDGSYTLLS 660
Query: 661 NLYANARRWKDVARIRSLMKHTGIRKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILG 720
NLYANARRWKDVARIR LMKHTGI+KRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNIL
Sbjct: 661 NLYANARRWKDVARIRRLMKHTGIKKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILS 720
Query: 721 DLIQRIKDMGYIPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIHISKNLR 780
DLIQRIKDMGY+PQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPI I+KNLR
Sbjct: 721 DLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRINKNLR 780
Query: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 823
ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW
Sbjct: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 822
BLAST of Sed0001312 vs. ExPASy Swiss-Prot
Match:
Q9LFL5 (Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H92 PE=2 SV=1)
HSP 1 Score: 1042.7 bits (2695), Expect = 2.2e-303
Identity = 503/822 (61.19%), Postives = 629/822 (76.52%), Query Frame = 0
Query: 3 FLKQCRTLISAKLAHQQILVNGF--TDLITYAVGGYIECGAFAQAVLLLERLIPSHSTVF 62
F+ +C+T+ KL HQ++L G +L ++ + YI G + AV LL R PS + V+
Sbjct: 34 FIHKCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVY 93
Query: 63 WWNALIRRSVRLVLLDDALGYYCQMQRLGCSPDHYTFPFILKACGEIPSFRWGASVHAIV 122
WN+LIR + L + M L +PD+YTFPF+ KACGEI S R G S HA+
Sbjct: 94 HWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALS 153
Query: 123 CASGFQSNVFICNSMVAMYGRCGALDDARQVFDEVLERKIEDIVSWNSILAAYVQGGKSK 182
+GF SNVF+ N++VAMY RC +L DAR+VFDE+ + D+VSWNSI+ +Y + GK K
Sbjct: 154 LVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEM---SVWDVVSWNSIIESYAKLGKPK 213
Query: 183 TALKIAFQMAKHYSFELRPDAITLVNILPACASTFASQHGRQVHGFAVRSGLGDDVFVGN 242
AL++ +M F RPD ITLVN+LP CAS G+Q+H FAV S + ++FVGN
Sbjct: 214 VALEMFSRMTN--EFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGN 273
Query: 243 ALVDMYAKCSKMTEANKVFEHMKEKDVVSWNAIVTGYSQIGRFDDALALFQRMQEEDIEL 302
LVDMYAKC M EAN VF +M KDVVSWNA+V GYSQIGRF+DA+ LF++MQEE I++
Sbjct: 274 CLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKM 333
Query: 303 NVVTWSAVIAGYAQRGHGFEALDVFRQMQLCGLEPNVITLVSLLSGCASVGALLHGKQTH 362
+VVTWSA I+GYAQRG G+EAL V RQM G++PN +TL+S+LSGCASVGAL+HGK+ H
Sbjct: 334 DVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIH 393
Query: 363 AYAIKNILKLERSDLGDDLMVINGLIDMYAKCKSSKVARNIFDLITGKDKNVVTWTVMIG 422
YAIK + L ++ GD+ MVIN LIDMYAKCK AR +FD ++ K+++VVTWTVMIG
Sbjct: 394 CYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIG 453
Query: 423 GYAQHGEANDAIELFSQMFKQECSLKPNAFTLSCALMACARLGALRLGRQIHAYALRHEN 482
GY+QHG+AN A+EL S+MF+++C +PNAFT+SCAL+ACA L ALR+G+QIHAYALR++
Sbjct: 454 GYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQ 513
Query: 483 ESEVLYVANCLIDMYSKSGDIDAAQIVFDNMKIQNAVSWTSLMTGYGIHGRGEEALQVFN 542
+ L+V+NCLIDMY+K G I A++VFDNM +N V+WTSLMTGYG+HG GEEAL +F+
Sbjct: 514 NAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFD 573
Query: 543 QMRQVGLAVDGVTFLVVLYACSHSGMVDQGMNYFHGMAKNFGVVPGAEHYACMVDLLGRA 602
+MR++G +DGVT LVVLYACSHSGM+DQGM YF+ M FGV PG EHYAC+VDLLGRA
Sbjct: 574 EMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRA 633
Query: 603 GRLDEAMELIESMPMEPTQVVWVALLSSSRTHANVELGEYAASKLIESGLENDGSYTLLS 662
GRL+ A+ LIE MPMEP VVWVA LS R H VELGEYAA K+ E +DGSYTLLS
Sbjct: 634 GRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLS 693
Query: 663 NLYANARRWKDVARIRSLMKHTGIRKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILG 722
NLYANA RWKDV RIRSLM+H G++KRPGCSWV+G K TTTFFVGDK+HP + +IY +L
Sbjct: 694 NLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLL 753
Query: 723 DLIQRIKDMGYIPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIHISKNLR 782
D +QRIKD+GY+P+T FALHDVDDEEK DLLFEHSEKLA+AYGILT+ G I I+KNLR
Sbjct: 754 DHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLR 813
Query: 783 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 823
+CGDCH+A TY+S II+H+IILRDSSRFHHFK GSCSC+GYW
Sbjct: 814 VCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
BLAST of Sed0001312 vs. ExPASy Swiss-Prot
Match:
Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)
HSP 1 Score: 560.1 bits (1442), Expect = 4.2e-158
Identity = 292/787 (37.10%), Postives = 447/787 (56.80%), Query Frame = 0
Query: 36 YIECGAFAQAVLLLERLIPSHSTVFWWNALIRRSVRLVLLDDALGYYCQMQRLGCSPDHY 95
Y CG +A + + + +WN L+ + ++G + +M G D Y
Sbjct: 139 YTNCGDLKEASRVFDEV--KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSY 198
Query: 96 TFPFILKACGEIPSFRWGASVHAIVCASGFQSNVFICNSMVAMYGRCGALDDARQVFDEV 155
TF + K+ + S G +H + SGF + NS+VA Y + +D AR+VFDE+
Sbjct: 199 TFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEM 258
Query: 156 LERKIEDIVSWNSILAAYVQGGKSKTALKIAFQMAKHYSFELRPDAITLVNILPACASTF 215
ER D++SWNSI+ YV G ++ L + QM + D T+V++ CA +
Sbjct: 259 TER---DVISWNSIINGYVSNGLAEKGLSVFVQMLVS---GIEIDLATIVSVFAGCADSR 318
Query: 216 ASQHGRQVHGFAVRSGLGDDVFVGNALVDMYAKCSKMTEANKVFEHMKEKDVVSWNAIVT 275
GR VH V++ + N L+DMY+KC + A VF M ++ VVS+ +++
Sbjct: 319 LISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIA 378
Query: 276 GYSQIGRFDDALALFQRMQEEDIELNVVTWSAVIAGYAQRGHGFEALDVFRQMQLCGLEP 335
GY++ G +A+ LF+ M+EE G+ P
Sbjct: 379 GYAREGLAGEAVKLFEEMEEE-----------------------------------GISP 438
Query: 336 NVITLVSLLSGCASVGALLHGKQTHAYAIKNILKLERSDLGDDLMVINGLIDMYAKCKSS 395
+V T+ ++L+ CA L GK+ H + ++ +DLG D+ V N L+DMYAKC S
Sbjct: 439 DVYTVTAVLNCCARYRLLDEGKRVHEW-------IKENDLGFDIFVSNALMDMYAKCGSM 498
Query: 396 KVARNIFDLITGKDKNVVTWTVMIGGYAQHGEANDAIELFSQMFKQECSLKPNAFTLSCA 455
+ A +F + KD +++W +IGGY+++ AN+A+ LF+ + +E P+ T++C
Sbjct: 499 QEAELVFSEMRVKD--IISWNTIIGGYSKNCYANEALSLFN-LLLEEKRFSPDERTVACV 558
Query: 456 LMACARLGALRLGRQIHAYALRHENESEVLYVANCLIDMYSKSGDIDAAQIVFDNMKIQN 515
L ACA L A GR+IH Y +R+ S+ +VAN L+DMY+K G + A ++FD++ ++
Sbjct: 559 LPACASLSAFDKGREIHGYIMRNGYFSD-RHVANSLVDMYAKCGALLLAHMLFDDIASKD 618
Query: 516 AVSWTSLMTGYGIHGRGEEALQVFNQMRQVGLAVDGVTFLVVLYACSHSGMVDQGMNYFH 575
VSWT ++ GYG+HG G+EA+ +FNQMRQ G+ D ++F+ +LYACSHSG+VD+G +F+
Sbjct: 619 LVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFN 678
Query: 576 GMAKNFGVVPGAEHYACMVDLLGRAGRLDEAMELIESMPMEPTQVVWVALLSSSRTHANV 635
M + P EHYAC+VD+L R G L +A IE+MP+ P +W ALL R H +V
Sbjct: 679 IMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDV 738
Query: 636 ELGEYAASKLIESGLENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKRPGCSWVQG 695
+L E A K+ E EN G Y L++N+YA A +W+ V R+R + G+RK PGCSW++
Sbjct: 739 KLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEI 798
Query: 696 KKSTTTFFVGDKSHPQSDQIYNILGDLIQRIKDMGYIPQTSFALHDVDDEEKGDLLFEHS 755
K F GD S+P+++ I L + R+ + GY P T +AL D ++ EK + L HS
Sbjct: 799 KGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHS 858
Query: 756 EKLAVAYGILTSAPGQPIHISKNLRICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGS 815
EKLA+A GI++S G+ I ++KNLR+CGDCH ++S + EI+LRDS+RFH FK G
Sbjct: 859 EKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGH 871
Query: 816 CSCRGYW 823
CSCRG+W
Sbjct: 919 CSCRGFW 871
BLAST of Sed0001312 vs. ExPASy Swiss-Prot
Match:
Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)
HSP 1 Score: 542.7 bits (1397), Expect = 7.0e-153
Identity = 291/822 (35.40%), Postives = 466/822 (56.69%), Query Frame = 0
Query: 4 LKQCRTLISAKLAHQQILVNGFTD---LITYAVGGYIECGAFAQAVLLLERLIPSHSTVF 63
L++C +L + + NG T V + G+ +A + E + + ++
Sbjct: 44 LERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLY 103
Query: 64 WWNALIRRSVRLVLLDDALGYYCQMQRLGCSPDHYTFPFILKACGEIPSFRWGASVHAIV 123
+ +++ ++ LD AL ++ +M+ P Y F ++LK CG+ R G +H ++
Sbjct: 104 --HTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLL 163
Query: 124 CASGFQSNVFICNSMVAMYGRCGALDDARQVFDEVLERKIEDIVSWNSILAAYVQGGKSK 183
SGF ++F + MY +C +++AR+VFD + ER D+VSWN+I+A Y Q G ++
Sbjct: 164 VKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPER---DLVSWNTIVAGYSQNGMAR 223
Query: 184 TALKIAFQMAKHYSFELRPDAITLVNILPACASTFASQHGRQVHGFAVRSGLGDDVFVGN 243
AL++ M + L+P IT+V++LPA ++ G+++HG+A+RSG V +
Sbjct: 224 MALEMVKSMCEE---NLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIST 283
Query: 244 ALVDMYAKCSKMTEANKVFEHMKEKDVVSWNAIVTGYSQIGRFDDALALFQRMQEEDIEL 303
ALVDMYAKC + A ++F+ M E++VVSWN+++ Y Q +A+ +FQ+M +E
Sbjct: 284 ALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDE---- 343
Query: 304 NVVTWSAVIAGYAQRGHGFEALDVFRQMQLCGLEPNVITLVSLLSGCASVGALLHGKQTH 363
G++P ++++ L CA +G L G+ H
Sbjct: 344 -------------------------------GVKPTDVSVMGALHACADLGDLERGRFIH 403
Query: 364 AYAIKNILKLERSDLGDDLMVINGLIDMYAKCKSSKVARNIFDLITGKDKNVVTWTVMIG 423
+++ L L+R ++ V+N LI MY KCK A ++F + + + +V+W MI
Sbjct: 404 KLSVE--LGLDR-----NVSVVNSLISMYCKCKEVDTAASMFGKL--QSRTLVSWNAMIL 463
Query: 424 GYAQHGEANDAIELFSQMFKQECSLKPNAFTLSCALMACARLGALRLGRQIHAYALRHEN 483
G+AQ+G DA+ FSQM + ++KP+ FT + A A L + IH +R
Sbjct: 464 GFAQNGRPIDALNYFSQM--RSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCL 523
Query: 484 ESEVLYVANCLIDMYSKSGDIDAAQIVFDNMKIQNAVSWTSLMTGYGIHGRGEEALQVFN 543
+ V +V L+DMY+K G I A+++FD M ++ +W +++ GYG HG G+ AL++F
Sbjct: 524 DKNV-FVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFE 583
Query: 544 QMRQVGLAVDGVTFLVVLYACSHSGMVDQGMNYFHGMAKNFGVVPGAEHYACMVDLLGRA 603
+M++ + +GVTFL V+ ACSHSG+V+ G+ F+ M +N+ + +HY MVDLLGRA
Sbjct: 584 EMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRA 643
Query: 604 GRLDEAMELIESMPMEPTQVVWVALLSSSRTHANVELGEYAASKLIESGLENDGSYTLLS 663
GRL+EA + I MP++P V+ A+L + + H NV E AA +L E ++ G + LL+
Sbjct: 644 GRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLA 703
Query: 664 NLYANARRWKDVARIRSLMKHTGIRKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILG 723
N+Y A W+ V ++R M G+RK PGCS V+ K +FF G +HP S +IY L
Sbjct: 704 NIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLE 763
Query: 724 DLIQRIKDMGYIPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIHISKNLR 783
LI IK+ GY+P T+ L V+++ K LL HSEKLA+++G+L + G IH+ KNLR
Sbjct: 764 KLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLR 809
Query: 784 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 823
+C DCH+A YIS++ EI++RD RFHHFK G+CSC YW
Sbjct: 824 VCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
BLAST of Sed0001312 vs. ExPASy Swiss-Prot
Match:
Q0WN60 (Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H8 PE=2 SV=2)
HSP 1 Score: 542.0 bits (1395), Expect = 1.2e-152
Identity = 305/866 (35.22%), Postives = 472/866 (54.50%), Query Frame = 0
Query: 28 LITYAVGGYIECGAFAQAVLLLERLIPSHSTVFWWNALIRRSVRLVLLDDALGYYCQM-Q 87
L T + Y CG+ + + + L +F WNA+I R L D+ L + +M
Sbjct: 122 LCTRIITMYAMCGSPDDSRFVFDAL--RSKNLFQWNAVISSYSRNELYDEVLETFIEMIS 181
Query: 88 RLGCSPDHYTFPFILKACGEIPSFRWGASVHAIVCASGFQSNVFICNSMVAMYGRCGALD 147
PDH+T+P ++KAC + G +VH +V +G +VF+ N++V+ YG G +
Sbjct: 182 TTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVT 241
Query: 148 DARQVFDEVLERKIEDIVSWNSILAAYVQGGKSKTA-LKIAFQMAKHYSFELRPDAITLV 207
DA Q+FD + ER ++VSWNS++ + G S+ + L + M ++ PD TLV
Sbjct: 242 DALQLFDIMPER---NLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLV 301
Query: 208 NILPACASTFASQHGRQVHGFAVRSGLGDDVFVGNALVDMYAKCSKMTEANKVFEHMKEK 267
+LP CA G+ VHG+AV+ L ++ + NAL+DMY+KC +T A +F+ K
Sbjct: 302 TVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNK 361
Query: 268 DVVSWNAIVTGYSQIGRFDDALALFQRMQE--EDIELNVVT------------------- 327
+VVSWN +V G+S G + ++M ED++ + VT
Sbjct: 362 NVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKE 421
Query: 328 -----------------------------------------------WSAVIAGYAQRGH 387
W+A+I G+AQ
Sbjct: 422 LHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSND 481
Query: 388 GFEALDVFRQMQLCGLEPNVITLVSLLSGCASVGALLHGKQTHAYAIKNILKLERSDLGD 447
+LD QM++ GL P+ T+ SLLS C+ + +L GK+ H + I+N L+
Sbjct: 482 PRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLE-------R 541
Query: 448 DLMVINGLIDMYAKCKSSKVARNIFDLITGKDKNVVTWTVMIGGYAQHGEANDAIELFSQ 507
DL V ++ +Y C + +FD + +DK++V+W +I GY Q+G + A+ +F Q
Sbjct: 542 DLFVYLSVLSLYIHCGELCTVQALFDAM--EDKSLVSWNTVITGYLQNGFPDRALGVFRQ 601
Query: 508 MFKQECSLKPNAFTLSCALMACARLGALRLGRQIHAYALRHENESEVLYVANCLIDMYSK 567
M L ++ AC+ L +LRLGR+ HAYAL+H E + ++A LIDMY+K
Sbjct: 602 MVLYGIQL--CGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDA-FIACSLIDMYAK 661
Query: 568 SGDIDAAQIVFDNMKIQNAVSWTSLMTGYGIHGRGEEALQVFNQMRQVGLAVDGVTFLVV 627
+G I + VF+ +K ++ SW +++ GYGIHG +EA+++F +M++ G D +TFL V
Sbjct: 662 NGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGV 721
Query: 628 LYACSHSGMVDQGMNYFHGMAKNFGVVPGAEHYACMVDLLGRAGRLDEAMELI-ESMPME 687
L AC+HSG++ +G+ Y M +FG+ P +HYAC++D+LGRAG+LD+A+ ++ E M E
Sbjct: 722 LTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEE 781
Query: 688 PTQVVWVALLSSSRTHANVELGEYAASKLIESGLENDGSYTLLSNLYANARRWKDVARIR 747
+W +LLSS R H N+E+GE A+KL E E +Y LLSNLYA +W+DV ++R
Sbjct: 782 ADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVR 841
Query: 748 SLMKHTGIRKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILGDLIQRIKDMGYIPQTS 807
M +RK GCSW++ + +F VG++ ++I ++ L +I MGY P T
Sbjct: 842 QRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTM 901
Query: 808 FALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIHISKNLRICGDCHSALTYISMII 823
HD+ +EEK + L HSEKLA+ YG++ ++ G I + KNLRIC DCH+A IS ++
Sbjct: 902 SVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVM 961
BLAST of Sed0001312 vs. ExPASy Swiss-Prot
Match:
Q9SHZ8 (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H41 PE=3 SV=1)
HSP 1 Score: 533.9 bits (1374), Expect = 3.3e-150
Identity = 281/728 (38.60%), Postives = 429/728 (58.93%), Query Frame = 0
Query: 130 FICNSMVAMYGRCGALDDARQVFDEVLERKIEDIVSWNSILAAYVQGGKSKTALKIAFQM 189
F N++++ Y + G +D + FD++ +R D VSW +++ Y G+ A+++ M
Sbjct: 81 FSWNTVLSAYSKRGDMDSTCEFFDQLPQR---DSVSWTTMIVGYKNIGQYHKAIRVMGDM 140
Query: 190 AKHYSFELRPDAITLVNILPACASTFASQHGRQVHGFAVRSGLGDDVFVGNALVDMYAKC 249
K + P TL N+L + A+T + G++VH F V+ GL +V V N+L++MYAKC
Sbjct: 141 VKE---GIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKC 200
Query: 250 SKMTEANKVFEHMKEKDVVSWNAIVTGYSQIGRFDDALALFQRMQEEDIELNVVTWSAVI 309
A VF+ M +D+ SWNA++ + Q+G+ D A+A F++M E DI VTW+++I
Sbjct: 201 GDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI----VTWNSMI 260
Query: 310 AGYAQRGHGFEALDVFRQMQLCG-LEPNVITLVSLLSGCASVGALLHGKQTHAYAIKNIL 369
+G+ QRG+ ALD+F +M L P+ TL S+LS CA++ L GKQ H++ +
Sbjct: 261 SGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTT-- 320
Query: 370 KLERSDLGDDL--MVINGLIDMYAKCKSSKVARNIFD----------------------- 429
G D+ +V+N LI MY++C + AR + +
Sbjct: 321 -------GFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLG 380
Query: 430 --------LITGKDKNVVTWTVMIGGYAQHGEANDAIELFSQMFKQECSLKPNAFTLSCA 489
++ KD++VV WT MI GY QHG +AI LF M +PN++TL+
Sbjct: 381 DMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGG--GQRPNSYTLAAM 440
Query: 490 LMACARLGALRLGRQIHAYALRHENESEVLYVANCLIDMYSKSGDIDAAQIVFDNMKIQ- 549
L + L +L G+QIH A++ E + V+N LI MY+K+G+I +A FD ++ +
Sbjct: 441 LSVASSLASLSHGKQIHGSAVK-SGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCER 500
Query: 550 NAVSWTSLMTGYGIHGRGEEALQVFNQMRQVGLAVDGVTFLVVLYACSHSGMVDQGMNYF 609
+ VSWTS++ HG EEAL++F M GL D +T++ V AC+H+G+V+QG YF
Sbjct: 501 DTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYF 560
Query: 610 HGMAKNFGVVPGAEHYACMVDLLGRAGRLDEAMELIESMPMEPTQVVWVALLSSSRTHAN 669
M ++P HYACMVDL GRAG L EA E IE MP+EP V W +LLS+ R H N
Sbjct: 561 DMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKN 620
Query: 670 VELGEYAASKLIESGLENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKRPGCSWVQ 729
++LG+ AA +L+ EN G+Y+ L+NLY+ +W++ A+IR MK ++K G SW++
Sbjct: 621 IDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIE 680
Query: 730 GKKSTTTFFVGDKSHPQSDQIYNILGDLIQRIKDMGYIPQTSFALHDVDDEEKGDLLFEH 789
K F V D +HP+ ++IY + + IK MGY+P T+ LHD+++E K +L H
Sbjct: 681 VKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHH 740
Query: 790 SEKLAVAYGILTSAPGQPIHISKNLRICGDCHSALTYISMIIEHEIILRDSSRFHHFKKG 823
SEKLA+A+G++++ + I KNLR+C DCH+A+ +IS ++ EII+RD++RFHHFK G
Sbjct: 741 SEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDG 786
BLAST of Sed0001312 vs. ExPASy TrEMBL
Match:
A0A6J1H912 (pentatricopeptide repeat-containing protein At5g16860 OS=Cucurbita moschata OX=3662 GN=LOC111461191 PE=3 SV=1)
HSP 1 Score: 1531.5 bits (3964), Expect = 0.0e+00
Identity = 746/822 (90.75%), Postives = 784/822 (95.38%), Query Frame = 0
Query: 1 MSFLKQCRTLISAKLAHQQILVNGFTDLITYAVGGYIECGAFAQAVLLLERLIPSHSTVF 60
MSFLKQCRTLI AKL HQQILVNGFTDL+T+A+GGYIEC AF QAV LLERL+PSHSTVF
Sbjct: 1 MSFLKQCRTLIDAKLVHQQILVNGFTDLVTHAIGGYIECNAFGQAVSLLERLVPSHSTVF 60
Query: 61 WWNALIRRSVRLVLLDDALGYYCQMQRLGCSPDHYTFPFILKACGEIPSFRWGASVHAIV 120
WWNALIRRSVRL LDDAL +Y QMQRLG PDHYTFPF+LKACGE SFR G SVHA+V
Sbjct: 61 WWNALIRRSVRLGFLDDALCFYRQMQRLGWWPDHYTFPFVLKACGEKLSFRCGTSVHAMV 120
Query: 121 CASGFQSNVFICNSMVAMYGRCGALDDARQVFDEVLERKIEDIVSWNSILAAYVQGGKSK 180
CA GF+SNVFICNS+VAMYGRCGALDDARQVFDEVLERKI+DIVSWNSILAAYVQGG+SK
Sbjct: 121 CAYGFESNVFICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQGGESK 180
Query: 181 TALKIAFQMAKHYSFELRPDAITLVNILPACASTFASQHGRQVHGFAVRSGLGDDVFVGN 240
AL+IAFQMAKHY+F+LRPDAITLVN+LPACASTFA+QHGRQVHGFAVRSGL DDVFVGN
Sbjct: 181 AALRIAFQMAKHYNFKLRPDAITLVNVLPACASTFATQHGRQVHGFAVRSGLVDDVFVGN 240
Query: 241 ALVDMYAKCSKMTEANKVFEHMKEKDVVSWNAIVTGYSQIGRFDDALALFQRMQEEDIEL 300
ALVDMYAKCSKM EANKVFE MKEKDVVSWNA+VTGYSQIG FDDAL+LF+RMQEEDIEL
Sbjct: 241 ALVDMYAKCSKMNEANKVFEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQEEDIEL 300
Query: 301 NVVTWSAVIAGYAQRGHGFEALDVFRQMQLCGLEPNVITLVSLLSGCASVGALLHGKQTH 360
NVVTWSAVIAGY+QRGHG EALDVFRQMQ CGLEPNV+TLVSLLSGCASVGALLHGKQTH
Sbjct: 301 NVVTWSAVIAGYSQRGHGCEALDVFRQMQHCGLEPNVVTLVSLLSGCASVGALLHGKQTH 360
Query: 361 AYAIKNILKLERSDLGDDLMVINGLIDMYAKCKSSKVARNIFDLITGKDKNVVTWTVMIG 420
AYAIKNIL L+ SD GDD+MV NGLIDMYAKCKSS+VARNIFD I GKDKNVVTWTVMIG
Sbjct: 361 AYAIKNILNLDWSDPGDDMMVFNGLIDMYAKCKSSRVARNIFDSIIGKDKNVVTWTVMIG 420
Query: 421 GYAQHGEANDAIELFSQMFKQECSLKPNAFTLSCALMACARLGALRLGRQIHAYALRHEN 480
GYAQHGEANDA+ELFSQMFKQE SLKPNAFTLSCALMACARLGALRLG+QIHAYALRHEN
Sbjct: 421 GYAQHGEANDAVELFSQMFKQETSLKPNAFTLSCALMACARLGALRLGKQIHAYALRHEN 480
Query: 481 ESEVLYVANCLIDMYSKSGDIDAAQIVFDNMKIQNAVSWTSLMTGYGIHGRGEEALQVFN 540
ESEVL+VANCLIDMYSKSGDIDAAQIVFDNMK++NAVSWTSLMTGYGIHGRGEEAL+VFN
Sbjct: 481 ESEVLHVANCLIDMYSKSGDIDAAQIVFDNMKVRNAVSWTSLMTGYGIHGRGEEALRVFN 540
Query: 541 QMRQVGLAVDGVTFLVVLYACSHSGMVDQGMNYFHGMAKNFGVVPGAEHYACMVDLLGRA 600
QMRQVGL+VDGVTFLVVLYACSHSGMVDQGMNYFHGM K FGV PGAEHYACMVDLLGRA
Sbjct: 541 QMRQVGLSVDGVTFLVVLYACSHSGMVDQGMNYFHGMVKYFGVAPGAEHYACMVDLLGRA 600
Query: 601 GRLDEAMELIESMPMEPTQVVWVALLSSSRTHANVELGEYAASKLIESGLENDGSYTLLS 660
GRL+EAMELI+SMPMEPT VVWVALLS+SRTHANVELGEYAASKL+ESG ENDGSYTLLS
Sbjct: 601 GRLNEAMELIKSMPMEPTPVVWVALLSASRTHANVELGEYAASKLMESGAENDGSYTLLS 660
Query: 661 NLYANARRWKDVARIRSLMKHTGIRKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILG 720
NLYANARRWKDVARIR LMKHTGI+KRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNIL
Sbjct: 661 NLYANARRWKDVARIRRLMKHTGIKKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILS 720
Query: 721 DLIQRIKDMGYIPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIHISKNLR 780
DLIQRIKDMGY+PQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPI I+KNLR
Sbjct: 721 DLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRINKNLR 780
Query: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 823
ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW
Sbjct: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 822
BLAST of Sed0001312 vs. ExPASy TrEMBL
Match:
A0A6J1KUL7 (pentatricopeptide repeat-containing protein At5g16860 OS=Cucurbita maxima OX=3661 GN=LOC111497759 PE=3 SV=1)
HSP 1 Score: 1528.5 bits (3956), Expect = 0.0e+00
Identity = 745/822 (90.63%), Postives = 785/822 (95.50%), Query Frame = 0
Query: 1 MSFLKQCRTLISAKLAHQQILVNGFTDLITYAVGGYIECGAFAQAVLLLERLIPSHSTVF 60
MSFLKQCRTLI AKL HQQILVNGFTDL+T+A+GGYIEC AFAQAV LLERL+PSHS VF
Sbjct: 1 MSFLKQCRTLIDAKLVHQQILVNGFTDLVTHAIGGYIECNAFAQAVSLLERLVPSHSAVF 60
Query: 61 WWNALIRRSVRLVLLDDALGYYCQMQRLGCSPDHYTFPFILKACGEIPSFRWGASVHAIV 120
WWNALIRRSVRL LDDAL +Y QM+RLG SPD+YTFPF+LKACGE SFR GASVHA+V
Sbjct: 61 WWNALIRRSVRLGFLDDALCFYRQMERLGWSPDYYTFPFVLKACGEKLSFRCGASVHAMV 120
Query: 121 CASGFQSNVFICNSMVAMYGRCGALDDARQVFDEVLERKIEDIVSWNSILAAYVQGGKSK 180
CA GF+SNVFICNS+VAMYGRCGALDDARQVFDEVLERKI+DIVSWNSILAAYVQGG+SK
Sbjct: 121 CAYGFESNVFICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQGGESK 180
Query: 181 TALKIAFQMAKHYSFELRPDAITLVNILPACASTFASQHGRQVHGFAVRSGLGDDVFVGN 240
AL+IAFQMAKHY+F+L PDAITLVN+LPACASTFA++HGRQVHGFAVRSGL DDVFVGN
Sbjct: 181 AALRIAFQMAKHYNFKLFPDAITLVNVLPACASTFATEHGRQVHGFAVRSGLVDDVFVGN 240
Query: 241 ALVDMYAKCSKMTEANKVFEHMKEKDVVSWNAIVTGYSQIGRFDDALALFQRMQEEDIEL 300
ALVDMYAKCSKM EANK+FE MKEKDVVSWNA+VTGYSQIG FDDAL+LF+RMQEEDIEL
Sbjct: 241 ALVDMYAKCSKMNEANKMFEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQEEDIEL 300
Query: 301 NVVTWSAVIAGYAQRGHGFEALDVFRQMQLCGLEPNVITLVSLLSGCASVGALLHGKQTH 360
NVVTWSAVIAGY+QRGHG EALDVFRQMQ CGLEPNV+TLVSLLSGCASVGALLHGKQTH
Sbjct: 301 NVVTWSAVIAGYSQRGHGCEALDVFRQMQNCGLEPNVVTLVSLLSGCASVGALLHGKQTH 360
Query: 361 AYAIKNILKLERSDLGDDLMVINGLIDMYAKCKSSKVARNIFDLITGKDKNVVTWTVMIG 420
AYAIKNIL L+ SD GDD+MV NGLIDMYAKCKSS+VAR+IFD I GKDKNVVTWTVMIG
Sbjct: 361 AYAIKNILNLDWSDPGDDMMVFNGLIDMYAKCKSSRVARSIFDSIIGKDKNVVTWTVMIG 420
Query: 421 GYAQHGEANDAIELFSQMFKQECSLKPNAFTLSCALMACARLGALRLGRQIHAYALRHEN 480
GYAQHGEANDAIELFSQMFKQE SLKPNAFTLSCALMACARLGALRLG+QIHAYALRHEN
Sbjct: 421 GYAQHGEANDAIELFSQMFKQETSLKPNAFTLSCALMACARLGALRLGKQIHAYALRHEN 480
Query: 481 ESEVLYVANCLIDMYSKSGDIDAAQIVFDNMKIQNAVSWTSLMTGYGIHGRGEEALQVFN 540
ESEVLYVANCLIDMYSKSGDIDAAQIVFDNMK+QNAVSWTSLMTGYGIHGRGEEAL+VFN
Sbjct: 481 ESEVLYVANCLIDMYSKSGDIDAAQIVFDNMKVQNAVSWTSLMTGYGIHGRGEEALRVFN 540
Query: 541 QMRQVGLAVDGVTFLVVLYACSHSGMVDQGMNYFHGMAKNFGVVPGAEHYACMVDLLGRA 600
QMR+VGL+VDGVTFLVVLYACSHSGMVDQGMNYFHGM K FGV PGAEHYACMVDLLGRA
Sbjct: 541 QMREVGLSVDGVTFLVVLYACSHSGMVDQGMNYFHGMVKYFGVAPGAEHYACMVDLLGRA 600
Query: 601 GRLDEAMELIESMPMEPTQVVWVALLSSSRTHANVELGEYAASKLIESGLENDGSYTLLS 660
GRL+EAMELI+SMPMEPT VVWVALLS+SRTHANVELGEYAASKLIESG ENDGSYTLLS
Sbjct: 601 GRLNEAMELIKSMPMEPTPVVWVALLSASRTHANVELGEYAASKLIESGAENDGSYTLLS 660
Query: 661 NLYANARRWKDVARIRSLMKHTGIRKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILG 720
NLYANARRWKDVARIR LMKHTGI+KRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNIL
Sbjct: 661 NLYANARRWKDVARIRRLMKHTGIKKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILA 720
Query: 721 DLIQRIKDMGYIPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIHISKNLR 780
DLIQRIKDMGY+PQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPI I+KNLR
Sbjct: 721 DLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRINKNLR 780
Query: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 823
ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW
Sbjct: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 822
BLAST of Sed0001312 vs. ExPASy TrEMBL
Match:
A0A6J1CPQ5 (pentatricopeptide repeat-containing protein At5g16860 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111013040 PE=3 SV=1)
HSP 1 Score: 1498.8 bits (3879), Expect = 0.0e+00
Identity = 728/822 (88.56%), Postives = 777/822 (94.53%), Query Frame = 0
Query: 1 MSFLKQCRTLISAKLAHQQILVNGFTDLITYAVGGYIECGAFAQAVLLLERLIPSHSTVF 60
+S L+QCRTLI+AKLAHQQILVNGFT ++TYA+G YIECGA AQAV LL+RLIPSHSTVF
Sbjct: 31 ISLLQQCRTLINAKLAHQQILVNGFTQMVTYAIGAYIECGASAQAVSLLQRLIPSHSTVF 90
Query: 61 WWNALIRRSVRLVLLDDALGYYCQMQRLGCSPDHYTFPFILKACGEIPSFRWGASVHAIV 120
WWNALIRRSVRL LDD LG+YCQMQRLG SPDHYTFPF+LKACGEIPSFR GASVHA+V
Sbjct: 91 WWNALIRRSVRLGFLDDVLGFYCQMQRLGWSPDHYTFPFVLKACGEIPSFRRGASVHAVV 150
Query: 121 CASGFQSNVFICNSMVAMYGRCGALDDARQVFDEVLERKIEDIVSWNSILAAYVQGGKSK 180
CA+GF+SNVFICNS+VAMYGRCGALDDARQVFDEVLERKIEDIVSWNSILAAYVQGG+SK
Sbjct: 151 CANGFESNVFICNSIVAMYGRCGALDDARQVFDEVLERKIEDIVSWNSILAAYVQGGESK 210
Query: 181 TALKIAFQMAKHYSFELRPDAITLVNILPACASTFASQHGRQVHGFAVRSGLGDDVFVGN 240
TAL+IA +MA HY+ +L PDAITLVNILPACAST A QHG+QVHG+AVRSGL DDVFVGN
Sbjct: 211 TALRIAVRMANHYNCKLLPDAITLVNILPACASTLAPQHGKQVHGYAVRSGLVDDVFVGN 270
Query: 241 ALVDMYAKCSKMTEANKVFEHMKEKDVVSWNAIVTGYSQIGRFDDALALFQRMQEEDIEL 300
ALVDMYAKC KM EA++VFE MKEKDVVSWNA+VTGYSQI RFDDAL+LF+RMQEEDIEL
Sbjct: 271 ALVDMYAKCWKMDEASRVFELMKEKDVVSWNAMVTGYSQISRFDDALSLFKRMQEEDIEL 330
Query: 301 NVVTWSAVIAGYAQRGHGFEALDVFRQMQLCGLEPNVITLVSLLSGCASVGALLHGKQTH 360
NVVTWSA+IAGY+QRG GFEALDVFRQMQLCGLEPNV+TLVSLLSGCASVGALLHGKQTH
Sbjct: 331 NVVTWSALIAGYSQRGLGFEALDVFRQMQLCGLEPNVVTLVSLLSGCASVGALLHGKQTH 390
Query: 361 AYAIKNILKLERSDLGDDLMVINGLIDMYAKCKSSKVARNIFDLITGKDKNVVTWTVMIG 420
AYAIKNIL + +D GDDLMV+NGLIDMYAKCKSSKVARNIFDLIT K+KNVVTWTVMIG
Sbjct: 391 AYAIKNILNFDWNDPGDDLMVLNGLIDMYAKCKSSKVARNIFDLITRKNKNVVTWTVMIG 450
Query: 421 GYAQHGEANDAIELFSQMFKQECSLKPNAFTLSCALMACARLGALRLGRQIHAYALRHEN 480
GYAQHGEANDA+ELFSQMFK E SLKPNAFTLSCALMACARLGALRLGRQIHAYALRHEN
Sbjct: 451 GYAQHGEANDALELFSQMFKHETSLKPNAFTLSCALMACARLGALRLGRQIHAYALRHEN 510
Query: 481 ESEVLYVANCLIDMYSKSGDIDAAQIVFDNMKIQNAVSWTSLMTGYGIHGRGEEALQVFN 540
E+EVLYVANCLIDMYSKSGDIDAAQ VFDNMK++NAVSWTSLMTGYG+HGRGEEAL +F+
Sbjct: 511 ENEVLYVANCLIDMYSKSGDIDAAQTVFDNMKVRNAVSWTSLMTGYGMHGRGEEALHIFD 570
Query: 541 QMRQVGLAVDGVTFLVVLYACSHSGMVDQGMNYFHGMAKNFGVVPGAEHYACMVDLLGRA 600
QM+Q LAVDGVTFLVVLYACSHSGMVDQGMNYFHGM K FGV PGAEHYACMVDLLGRA
Sbjct: 571 QMQQADLAVDGVTFLVVLYACSHSGMVDQGMNYFHGMIKYFGVAPGAEHYACMVDLLGRA 630
Query: 601 GRLDEAMELIESMPMEPTQVVWVALLSSSRTHANVELGEYAASKLIESGLENDGSYTLLS 660
GRL+EAMELI+SM EPT VVWVALLS+SR HANVELGEYAA+KLIESGLENDGSYTLLS
Sbjct: 631 GRLNEAMELIKSMSTEPTAVVWVALLSASRIHANVELGEYAANKLIESGLENDGSYTLLS 690
Query: 661 NLYANARRWKDVARIRSLMKHTGIRKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILG 720
NLYANARRWKDVARIRSLMKHTGI+KRPGCSWVQGKK TTTFFVGD+SHPQSDQIY IL
Sbjct: 691 NLYANARRWKDVARIRSLMKHTGIKKRPGCSWVQGKKGTTTFFVGDRSHPQSDQIYGILA 750
Query: 721 DLIQRIKDMGYIPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIHISKNLR 780
DLIQRIKDMGY+PQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTS+PGQPI I+KNLR
Sbjct: 751 DLIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSSPGQPIRINKNLR 810
Query: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 823
ICGDCHSALTYISMIIEHEIILRDSSRFHHFK GSCSCRGYW
Sbjct: 811 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKNGSCSCRGYW 852
BLAST of Sed0001312 vs. ExPASy TrEMBL
Match:
A0A1S3C0G3 (pentatricopeptide repeat-containing protein At5g16860 OS=Cucumis melo OX=3656 GN=LOC103495413 PE=3 SV=1)
HSP 1 Score: 1458.4 bits (3774), Expect = 0.0e+00
Identity = 698/822 (84.91%), Postives = 768/822 (93.43%), Query Frame = 0
Query: 1 MSFLKQCRTLISAKLAHQQILVNGFTDLITYAVGGYIECGAFAQAVLLLERLIPSHSTVF 60
+S L+QC+TLI+AKLAHQQI V+GFT++ +YAVG YIECGA A+AV LL+R+IPSHSTVF
Sbjct: 47 ISLLRQCKTLINAKLAHQQIFVHGFTEMFSYAVGAYIECGASAEAVSLLQRIIPSHSTVF 106
Query: 61 WWNALIRRSVRLVLLDDALGYYCQMQRLGCSPDHYTFPFILKACGEIPSFRWGASVHAIV 120
WWNALIRRSVRL LLDD LG+YCQMQ LG PDHYTFPF+LKACGEIPSFR GASVHA+V
Sbjct: 107 WWNALIRRSVRLGLLDDTLGFYCQMQSLGWLPDHYTFPFVLKACGEIPSFRHGASVHAVV 166
Query: 121 CASGFQSNVFICNSMVAMYGRCGALDDARQVFDEVLERKIEDIVSWNSILAAYVQGGKSK 180
CA GF+SNVFICNS+VAMYGRCGALDDARQ+FDEVLER+IEDIVSWNSILAAYVQGGKS+
Sbjct: 167 CAKGFESNVFICNSIVAMYGRCGALDDARQMFDEVLERRIEDIVSWNSILAAYVQGGKSR 226
Query: 181 TALKIAFQMAKHYSFELRPDAITLVNILPACASTFASQHGRQVHGFAVRSGLGDDVFVGN 240
TAL+IAFQM HYS +LRPDAITLVNILPACAS FA QHG+QVHGF+VRSGL DDVFVGN
Sbjct: 227 TALRIAFQMGNHYSLKLRPDAITLVNILPACASIFAIQHGKQVHGFSVRSGLVDDVFVGN 286
Query: 241 ALVDMYAKCSKMTEANKVFEHMKEKDVVSWNAIVTGYSQIGRFDDALALFQRMQEEDIEL 300
ALV MYAKCSKM EANKVFE +K+KDVVSWNA+VTGYSQIG FD AL+LF+ MQEEDI+L
Sbjct: 287 ALVSMYAKCSKMNEANKVFERIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKL 346
Query: 301 NVVTWSAVIAGYAQRGHGFEALDVFRQMQLCGLEPNVITLVSLLSGCASVGALLHGKQTH 360
+V+TWSAVIAGYAQ+GHGFEALDVFRQMQL GLEPNV+TLVSLLSGCASVGALL+GKQTH
Sbjct: 347 DVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLVSLLSGCASVGALLYGKQTH 406
Query: 361 AYAIKNILKLERSDLGDDLMVINGLIDMYAKCKSSKVARNIFDLITGKDKNVVTWTVMIG 420
AY IKNIL L SD GDD++V+NGLIDMYAKCKS +VARNIFD I GKDK+VVTWTVMIG
Sbjct: 407 AYVIKNILNLNWSDKGDDMLVLNGLIDMYAKCKSYRVARNIFDSIAGKDKDVVTWTVMIG 466
Query: 421 GYAQHGEANDAIELFSQMFKQECSLKPNAFTLSCALMACARLGALRLGRQIHAYALRHEN 480
GYAQHGEANDA++LF+Q+F+Q+ SLKPNAFTLSCALMACARLG LRLGRQ+HAYALR+EN
Sbjct: 467 GYAQHGEANDALQLFAQIFEQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNEN 526
Query: 481 ESEVLYVANCLIDMYSKSGDIDAAQIVFDNMKIQNAVSWTSLMTGYGIHGRGEEALQVFN 540
ESEVLYVANCLIDMYSKSGDIDAA+ VF+NMK++N VSWTSLMTGYG+HGRGEEAL VF+
Sbjct: 527 ESEVLYVANCLIDMYSKSGDIDAARAVFNNMKLRNVVSWTSLMTGYGMHGRGEEALHVFD 586
Query: 541 QMRQVGLAVDGVTFLVVLYACSHSGMVDQGMNYFHGMAKNFGVVPGAEHYACMVDLLGRA 600
QMRQ+G VDG+TFLVVLYACSHSG+VDQGMNYFH M K FG+ PGAEHYACMVDLLGRA
Sbjct: 587 QMRQLGFVVDGITFLVVLYACSHSGLVDQGMNYFHDMVKCFGITPGAEHYACMVDLLGRA 646
Query: 601 GRLDEAMELIESMPMEPTQVVWVALLSSSRTHANVELGEYAASKLIESGLENDGSYTLLS 660
GRL+EAMELI+SM MEPT VVWVALLS+SR HAN+ELGEYAASKLIE G ENDGSYTLLS
Sbjct: 647 GRLNEAMELIKSMSMEPTAVVWVALLSASRIHANIELGEYAASKLIELGAENDGSYTLLS 706
Query: 661 NLYANARRWKDVARIRSLMKHTGIRKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILG 720
NLYANARRWKDVARIRSLMKHTGIRKRPGCSW+QGKKSTTTFFVGD+SHP+S+QIYN+L
Sbjct: 707 NLYANARRWKDVARIRSLMKHTGIRKRPGCSWIQGKKSTTTFFVGDRSHPESEQIYNLLS 766
Query: 721 DLIQRIKDMGYIPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIHISKNLR 780
DLI+RIKDMGY+PQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILT+APGQPI I KNLR
Sbjct: 767 DLIKRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTTAPGQPIRIHKNLR 826
Query: 781 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 823
ICGDCHSALTYISMII+HEIILRDSSRFHHFKKGSCSCR YW
Sbjct: 827 ICGDCHSALTYISMIIDHEIILRDSSRFHHFKKGSCSCRSYW 868
BLAST of Sed0001312 vs. ExPASy TrEMBL
Match:
A0A6J1CP62 (pentatricopeptide repeat-containing protein At5g16860 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111013040 PE=3 SV=1)
HSP 1 Score: 1454.9 bits (3765), Expect = 0.0e+00
Identity = 706/795 (88.81%), Postives = 752/795 (94.59%), Query Frame = 0
Query: 28 LITYAVGGYIECGAFAQAVLLLERLIPSHSTVFWWNALIRRSVRLVLLDDALGYYCQMQR 87
++TYA+G YIECGA AQAV LL+RLIPSHSTVFWWNALIRRSVRL LDD LG+YCQMQR
Sbjct: 1 MVTYAIGAYIECGASAQAVSLLQRLIPSHSTVFWWNALIRRSVRLGFLDDVLGFYCQMQR 60
Query: 88 LGCSPDHYTFPFILKACGEIPSFRWGASVHAIVCASGFQSNVFICNSMVAMYGRCGALDD 147
LG SPDHYTFPF+LKACGEIPSFR GASVHA+VCA+GF+SNVFICNS+VAMYGRCGALDD
Sbjct: 61 LGWSPDHYTFPFVLKACGEIPSFRRGASVHAVVCANGFESNVFICNSIVAMYGRCGALDD 120
Query: 148 ARQVFDEVLERKIEDIVSWNSILAAYVQGGKSKTALKIAFQMAKHYSFELRPDAITLVNI 207
ARQVFDEVLERKIEDIVSWNSILAAYVQGG+SKTAL+IA +MA HY+ +L PDAITLVNI
Sbjct: 121 ARQVFDEVLERKIEDIVSWNSILAAYVQGGESKTALRIAVRMANHYNCKLLPDAITLVNI 180
Query: 208 LPACASTFASQHGRQVHGFAVRSGLGDDVFVGNALVDMYAKCSKMTEANKVFEHMKEKDV 267
LPACAST A QHG+QVHG+AVRSGL DDVFVGNALVDMYAKC KM EA++VFE MKEKDV
Sbjct: 181 LPACASTLAPQHGKQVHGYAVRSGLVDDVFVGNALVDMYAKCWKMDEASRVFELMKEKDV 240
Query: 268 VSWNAIVTGYSQIGRFDDALALFQRMQEEDIELNVVTWSAVIAGYAQRGHGFEALDVFRQ 327
VSWNA+VTGYSQI RFDDAL+LF+RMQEEDIELNVVTWSA+IAGY+QRG GFEALDVFRQ
Sbjct: 241 VSWNAMVTGYSQISRFDDALSLFKRMQEEDIELNVVTWSALIAGYSQRGLGFEALDVFRQ 300
Query: 328 MQLCGLEPNVITLVSLLSGCASVGALLHGKQTHAYAIKNILKLERSDLGDDLMVINGLID 387
MQLCGLEPNV+TLVSLLSGCASVGALLHGKQTHAYAIKNIL + +D GDDLMV+NGLID
Sbjct: 301 MQLCGLEPNVVTLVSLLSGCASVGALLHGKQTHAYAIKNILNFDWNDPGDDLMVLNGLID 360
Query: 388 MYAKCKSSKVARNIFDLITGKDKNVVTWTVMIGGYAQHGEANDAIELFSQMFKQECSLKP 447
MYAKCKSSKVARNIFDLIT K+KNVVTWTVMIGGYAQHGEANDA+ELFSQMFK E SLKP
Sbjct: 361 MYAKCKSSKVARNIFDLITRKNKNVVTWTVMIGGYAQHGEANDALELFSQMFKHETSLKP 420
Query: 448 NAFTLSCALMACARLGALRLGRQIHAYALRHENESEVLYVANCLIDMYSKSGDIDAAQIV 507
NAFTLSCALMACARLGALRLGRQIHAYALRHENE+EVLYVANCLIDMYSKSGDIDAAQ V
Sbjct: 421 NAFTLSCALMACARLGALRLGRQIHAYALRHENENEVLYVANCLIDMYSKSGDIDAAQTV 480
Query: 508 FDNMKIQNAVSWTSLMTGYGIHGRGEEALQVFNQMRQVGLAVDGVTFLVVLYACSHSGMV 567
FDNMK++NAVSWTSLMTGYG+HGRGEEAL +F+QM+Q LAVDGVTFLVVLYACSHSGMV
Sbjct: 481 FDNMKVRNAVSWTSLMTGYGMHGRGEEALHIFDQMQQADLAVDGVTFLVVLYACSHSGMV 540
Query: 568 DQGMNYFHGMAKNFGVVPGAEHYACMVDLLGRAGRLDEAMELIESMPMEPTQVVWVALLS 627
DQGMNYFHGM K FGV PGAEHYACMVDLLGRAGRL+EAMELI+SM EPT VVWVALLS
Sbjct: 541 DQGMNYFHGMIKYFGVAPGAEHYACMVDLLGRAGRLNEAMELIKSMSTEPTAVVWVALLS 600
Query: 628 SSRTHANVELGEYAASKLIESGLENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKR 687
+SR HANVELGEYAA+KLIESGLENDGSYTLLSNLYANARRWKDVARIRSLMKHTGI+KR
Sbjct: 601 ASRIHANVELGEYAANKLIESGLENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIKKR 660
Query: 688 PGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILGDLIQRIKDMGYIPQTSFALHDVDDEEK 747
PGCSWVQGKK TTTFFVGD+SHPQSDQIY IL DLIQRIKDMGY+PQTSFALHDVDDEEK
Sbjct: 661 PGCSWVQGKKGTTTFFVGDRSHPQSDQIYGILADLIQRIKDMGYVPQTSFALHDVDDEEK 720
Query: 748 GDLLFEHSEKLAVAYGILTSAPGQPIHISKNLRICGDCHSALTYISMIIEHEIILRDSSR 807
GDLLFEHSEKLAVAYGILTS+PGQPI I+KNLRICGDCHSALTYISMIIEHEIILRDSSR
Sbjct: 721 GDLLFEHSEKLAVAYGILTSSPGQPIRINKNLRICGDCHSALTYISMIIEHEIILRDSSR 780
Query: 808 FHHFKKGSCSCRGYW 823
FHHFK GSCSCRGYW
Sbjct: 781 FHHFKNGSCSCRGYW 795
BLAST of Sed0001312 vs. TAIR 10
Match:
AT5G16860.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 1042.7 bits (2695), Expect = 1.5e-304
Identity = 503/822 (61.19%), Postives = 629/822 (76.52%), Query Frame = 0
Query: 3 FLKQCRTLISAKLAHQQILVNGF--TDLITYAVGGYIECGAFAQAVLLLERLIPSHSTVF 62
F+ +C+T+ KL HQ++L G +L ++ + YI G + AV LL R PS + V+
Sbjct: 34 FIHKCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVY 93
Query: 63 WWNALIRRSVRLVLLDDALGYYCQMQRLGCSPDHYTFPFILKACGEIPSFRWGASVHAIV 122
WN+LIR + L + M L +PD+YTFPF+ KACGEI S R G S HA+
Sbjct: 94 HWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALS 153
Query: 123 CASGFQSNVFICNSMVAMYGRCGALDDARQVFDEVLERKIEDIVSWNSILAAYVQGGKSK 182
+GF SNVF+ N++VAMY RC +L DAR+VFDE+ + D+VSWNSI+ +Y + GK K
Sbjct: 154 LVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEM---SVWDVVSWNSIIESYAKLGKPK 213
Query: 183 TALKIAFQMAKHYSFELRPDAITLVNILPACASTFASQHGRQVHGFAVRSGLGDDVFVGN 242
AL++ +M F RPD ITLVN+LP CAS G+Q+H FAV S + ++FVGN
Sbjct: 214 VALEMFSRMTN--EFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGN 273
Query: 243 ALVDMYAKCSKMTEANKVFEHMKEKDVVSWNAIVTGYSQIGRFDDALALFQRMQEEDIEL 302
LVDMYAKC M EAN VF +M KDVVSWNA+V GYSQIGRF+DA+ LF++MQEE I++
Sbjct: 274 CLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKM 333
Query: 303 NVVTWSAVIAGYAQRGHGFEALDVFRQMQLCGLEPNVITLVSLLSGCASVGALLHGKQTH 362
+VVTWSA I+GYAQRG G+EAL V RQM G++PN +TL+S+LSGCASVGAL+HGK+ H
Sbjct: 334 DVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIH 393
Query: 363 AYAIKNILKLERSDLGDDLMVINGLIDMYAKCKSSKVARNIFDLITGKDKNVVTWTVMIG 422
YAIK + L ++ GD+ MVIN LIDMYAKCK AR +FD ++ K+++VVTWTVMIG
Sbjct: 394 CYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIG 453
Query: 423 GYAQHGEANDAIELFSQMFKQECSLKPNAFTLSCALMACARLGALRLGRQIHAYALRHEN 482
GY+QHG+AN A+EL S+MF+++C +PNAFT+SCAL+ACA L ALR+G+QIHAYALR++
Sbjct: 454 GYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQ 513
Query: 483 ESEVLYVANCLIDMYSKSGDIDAAQIVFDNMKIQNAVSWTSLMTGYGIHGRGEEALQVFN 542
+ L+V+NCLIDMY+K G I A++VFDNM +N V+WTSLMTGYG+HG GEEAL +F+
Sbjct: 514 NAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFD 573
Query: 543 QMRQVGLAVDGVTFLVVLYACSHSGMVDQGMNYFHGMAKNFGVVPGAEHYACMVDLLGRA 602
+MR++G +DGVT LVVLYACSHSGM+DQGM YF+ M FGV PG EHYAC+VDLLGRA
Sbjct: 574 EMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRA 633
Query: 603 GRLDEAMELIESMPMEPTQVVWVALLSSSRTHANVELGEYAASKLIESGLENDGSYTLLS 662
GRL+ A+ LIE MPMEP VVWVA LS R H VELGEYAA K+ E +DGSYTLLS
Sbjct: 634 GRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLS 693
Query: 663 NLYANARRWKDVARIRSLMKHTGIRKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILG 722
NLYANA RWKDV RIRSLM+H G++KRPGCSWV+G K TTTFFVGDK+HP + +IY +L
Sbjct: 694 NLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLL 753
Query: 723 DLIQRIKDMGYIPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIHISKNLR 782
D +QRIKD+GY+P+T FALHDVDDEEK DLLFEHSEKLA+AYGILT+ G I I+KNLR
Sbjct: 754 DHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLR 813
Query: 783 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 823
+CGDCH+A TY+S II+H+IILRDSSRFHHFK GSCSC+GYW
Sbjct: 814 VCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
BLAST of Sed0001312 vs. TAIR 10
Match:
AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 560.1 bits (1442), Expect = 3.0e-159
Identity = 292/787 (37.10%), Postives = 447/787 (56.80%), Query Frame = 0
Query: 36 YIECGAFAQAVLLLERLIPSHSTVFWWNALIRRSVRLVLLDDALGYYCQMQRLGCSPDHY 95
Y CG +A + + + +WN L+ + ++G + +M G D Y
Sbjct: 139 YTNCGDLKEASRVFDEV--KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSY 198
Query: 96 TFPFILKACGEIPSFRWGASVHAIVCASGFQSNVFICNSMVAMYGRCGALDDARQVFDEV 155
TF + K+ + S G +H + SGF + NS+VA Y + +D AR+VFDE+
Sbjct: 199 TFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEM 258
Query: 156 LERKIEDIVSWNSILAAYVQGGKSKTALKIAFQMAKHYSFELRPDAITLVNILPACASTF 215
ER D++SWNSI+ YV G ++ L + QM + D T+V++ CA +
Sbjct: 259 TER---DVISWNSIINGYVSNGLAEKGLSVFVQMLVS---GIEIDLATIVSVFAGCADSR 318
Query: 216 ASQHGRQVHGFAVRSGLGDDVFVGNALVDMYAKCSKMTEANKVFEHMKEKDVVSWNAIVT 275
GR VH V++ + N L+DMY+KC + A VF M ++ VVS+ +++
Sbjct: 319 LISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIA 378
Query: 276 GYSQIGRFDDALALFQRMQEEDIELNVVTWSAVIAGYAQRGHGFEALDVFRQMQLCGLEP 335
GY++ G +A+ LF+ M+EE G+ P
Sbjct: 379 GYAREGLAGEAVKLFEEMEEE-----------------------------------GISP 438
Query: 336 NVITLVSLLSGCASVGALLHGKQTHAYAIKNILKLERSDLGDDLMVINGLIDMYAKCKSS 395
+V T+ ++L+ CA L GK+ H + ++ +DLG D+ V N L+DMYAKC S
Sbjct: 439 DVYTVTAVLNCCARYRLLDEGKRVHEW-------IKENDLGFDIFVSNALMDMYAKCGSM 498
Query: 396 KVARNIFDLITGKDKNVVTWTVMIGGYAQHGEANDAIELFSQMFKQECSLKPNAFTLSCA 455
+ A +F + KD +++W +IGGY+++ AN+A+ LF+ + +E P+ T++C
Sbjct: 499 QEAELVFSEMRVKD--IISWNTIIGGYSKNCYANEALSLFN-LLLEEKRFSPDERTVACV 558
Query: 456 LMACARLGALRLGRQIHAYALRHENESEVLYVANCLIDMYSKSGDIDAAQIVFDNMKIQN 515
L ACA L A GR+IH Y +R+ S+ +VAN L+DMY+K G + A ++FD++ ++
Sbjct: 559 LPACASLSAFDKGREIHGYIMRNGYFSD-RHVANSLVDMYAKCGALLLAHMLFDDIASKD 618
Query: 516 AVSWTSLMTGYGIHGRGEEALQVFNQMRQVGLAVDGVTFLVVLYACSHSGMVDQGMNYFH 575
VSWT ++ GYG+HG G+EA+ +FNQMRQ G+ D ++F+ +LYACSHSG+VD+G +F+
Sbjct: 619 LVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFN 678
Query: 576 GMAKNFGVVPGAEHYACMVDLLGRAGRLDEAMELIESMPMEPTQVVWVALLSSSRTHANV 635
M + P EHYAC+VD+L R G L +A IE+MP+ P +W ALL R H +V
Sbjct: 679 IMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDV 738
Query: 636 ELGEYAASKLIESGLENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKRPGCSWVQG 695
+L E A K+ E EN G Y L++N+YA A +W+ V R+R + G+RK PGCSW++
Sbjct: 739 KLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEI 798
Query: 696 KKSTTTFFVGDKSHPQSDQIYNILGDLIQRIKDMGYIPQTSFALHDVDDEEKGDLLFEHS 755
K F GD S+P+++ I L + R+ + GY P T +AL D ++ EK + L HS
Sbjct: 799 KGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHS 858
Query: 756 EKLAVAYGILTSAPGQPIHISKNLRICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGS 815
EKLA+A GI++S G+ I ++KNLR+CGDCH ++S + EI+LRDS+RFH FK G
Sbjct: 859 EKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGH 871
Query: 816 CSCRGYW 823
CSCRG+W
Sbjct: 919 CSCRGFW 871
BLAST of Sed0001312 vs. TAIR 10
Match:
AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 542.7 bits (1397), Expect = 5.0e-154
Identity = 291/822 (35.40%), Postives = 466/822 (56.69%), Query Frame = 0
Query: 4 LKQCRTLISAKLAHQQILVNGFTD---LITYAVGGYIECGAFAQAVLLLERLIPSHSTVF 63
L++C +L + + NG T V + G+ +A + E + + ++
Sbjct: 44 LERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLY 103
Query: 64 WWNALIRRSVRLVLLDDALGYYCQMQRLGCSPDHYTFPFILKACGEIPSFRWGASVHAIV 123
+ +++ ++ LD AL ++ +M+ P Y F ++LK CG+ R G +H ++
Sbjct: 104 --HTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLL 163
Query: 124 CASGFQSNVFICNSMVAMYGRCGALDDARQVFDEVLERKIEDIVSWNSILAAYVQGGKSK 183
SGF ++F + MY +C +++AR+VFD + ER D+VSWN+I+A Y Q G ++
Sbjct: 164 VKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPER---DLVSWNTIVAGYSQNGMAR 223
Query: 184 TALKIAFQMAKHYSFELRPDAITLVNILPACASTFASQHGRQVHGFAVRSGLGDDVFVGN 243
AL++ M + L+P IT+V++LPA ++ G+++HG+A+RSG V +
Sbjct: 224 MALEMVKSMCEE---NLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIST 283
Query: 244 ALVDMYAKCSKMTEANKVFEHMKEKDVVSWNAIVTGYSQIGRFDDALALFQRMQEEDIEL 303
ALVDMYAKC + A ++F+ M E++VVSWN+++ Y Q +A+ +FQ+M +E
Sbjct: 284 ALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDE---- 343
Query: 304 NVVTWSAVIAGYAQRGHGFEALDVFRQMQLCGLEPNVITLVSLLSGCASVGALLHGKQTH 363
G++P ++++ L CA +G L G+ H
Sbjct: 344 -------------------------------GVKPTDVSVMGALHACADLGDLERGRFIH 403
Query: 364 AYAIKNILKLERSDLGDDLMVINGLIDMYAKCKSSKVARNIFDLITGKDKNVVTWTVMIG 423
+++ L L+R ++ V+N LI MY KCK A ++F + + + +V+W MI
Sbjct: 404 KLSVE--LGLDR-----NVSVVNSLISMYCKCKEVDTAASMFGKL--QSRTLVSWNAMIL 463
Query: 424 GYAQHGEANDAIELFSQMFKQECSLKPNAFTLSCALMACARLGALRLGRQIHAYALRHEN 483
G+AQ+G DA+ FSQM + ++KP+ FT + A A L + IH +R
Sbjct: 464 GFAQNGRPIDALNYFSQM--RSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCL 523
Query: 484 ESEVLYVANCLIDMYSKSGDIDAAQIVFDNMKIQNAVSWTSLMTGYGIHGRGEEALQVFN 543
+ V +V L+DMY+K G I A+++FD M ++ +W +++ GYG HG G+ AL++F
Sbjct: 524 DKNV-FVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFE 583
Query: 544 QMRQVGLAVDGVTFLVVLYACSHSGMVDQGMNYFHGMAKNFGVVPGAEHYACMVDLLGRA 603
+M++ + +GVTFL V+ ACSHSG+V+ G+ F+ M +N+ + +HY MVDLLGRA
Sbjct: 584 EMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRA 643
Query: 604 GRLDEAMELIESMPMEPTQVVWVALLSSSRTHANVELGEYAASKLIESGLENDGSYTLLS 663
GRL+EA + I MP++P V+ A+L + + H NV E AA +L E ++ G + LL+
Sbjct: 644 GRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLA 703
Query: 664 NLYANARRWKDVARIRSLMKHTGIRKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILG 723
N+Y A W+ V ++R M G+RK PGCS V+ K +FF G +HP S +IY L
Sbjct: 704 NIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLE 763
Query: 724 DLIQRIKDMGYIPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIHISKNLR 783
LI IK+ GY+P T+ L V+++ K LL HSEKLA+++G+L + G IH+ KNLR
Sbjct: 764 KLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLR 809
Query: 784 ICGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 823
+C DCH+A YIS++ EI++RD RFHHFK G+CSC YW
Sbjct: 824 VCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
BLAST of Sed0001312 vs. TAIR 10
Match:
AT1G18485.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 542.0 bits (1395), Expect = 8.5e-154
Identity = 305/866 (35.22%), Postives = 472/866 (54.50%), Query Frame = 0
Query: 28 LITYAVGGYIECGAFAQAVLLLERLIPSHSTVFWWNALIRRSVRLVLLDDALGYYCQM-Q 87
L T + Y CG+ + + + L +F WNA+I R L D+ L + +M
Sbjct: 122 LCTRIITMYAMCGSPDDSRFVFDAL--RSKNLFQWNAVISSYSRNELYDEVLETFIEMIS 181
Query: 88 RLGCSPDHYTFPFILKACGEIPSFRWGASVHAIVCASGFQSNVFICNSMVAMYGRCGALD 147
PDH+T+P ++KAC + G +VH +V +G +VF+ N++V+ YG G +
Sbjct: 182 TTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVT 241
Query: 148 DARQVFDEVLERKIEDIVSWNSILAAYVQGGKSKTA-LKIAFQMAKHYSFELRPDAITLV 207
DA Q+FD + ER ++VSWNS++ + G S+ + L + M ++ PD TLV
Sbjct: 242 DALQLFDIMPER---NLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLV 301
Query: 208 NILPACASTFASQHGRQVHGFAVRSGLGDDVFVGNALVDMYAKCSKMTEANKVFEHMKEK 267
+LP CA G+ VHG+AV+ L ++ + NAL+DMY+KC +T A +F+ K
Sbjct: 302 TVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNK 361
Query: 268 DVVSWNAIVTGYSQIGRFDDALALFQRMQE--EDIELNVVT------------------- 327
+VVSWN +V G+S G + ++M ED++ + VT
Sbjct: 362 NVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKE 421
Query: 328 -----------------------------------------------WSAVIAGYAQRGH 387
W+A+I G+AQ
Sbjct: 422 LHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSND 481
Query: 388 GFEALDVFRQMQLCGLEPNVITLVSLLSGCASVGALLHGKQTHAYAIKNILKLERSDLGD 447
+LD QM++ GL P+ T+ SLLS C+ + +L GK+ H + I+N L+
Sbjct: 482 PRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLE-------R 541
Query: 448 DLMVINGLIDMYAKCKSSKVARNIFDLITGKDKNVVTWTVMIGGYAQHGEANDAIELFSQ 507
DL V ++ +Y C + +FD + +DK++V+W +I GY Q+G + A+ +F Q
Sbjct: 542 DLFVYLSVLSLYIHCGELCTVQALFDAM--EDKSLVSWNTVITGYLQNGFPDRALGVFRQ 601
Query: 508 MFKQECSLKPNAFTLSCALMACARLGALRLGRQIHAYALRHENESEVLYVANCLIDMYSK 567
M L ++ AC+ L +LRLGR+ HAYAL+H E + ++A LIDMY+K
Sbjct: 602 MVLYGIQL--CGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDA-FIACSLIDMYAK 661
Query: 568 SGDIDAAQIVFDNMKIQNAVSWTSLMTGYGIHGRGEEALQVFNQMRQVGLAVDGVTFLVV 627
+G I + VF+ +K ++ SW +++ GYGIHG +EA+++F +M++ G D +TFL V
Sbjct: 662 NGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGV 721
Query: 628 LYACSHSGMVDQGMNYFHGMAKNFGVVPGAEHYACMVDLLGRAGRLDEAMELI-ESMPME 687
L AC+HSG++ +G+ Y M +FG+ P +HYAC++D+LGRAG+LD+A+ ++ E M E
Sbjct: 722 LTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEE 781
Query: 688 PTQVVWVALLSSSRTHANVELGEYAASKLIESGLENDGSYTLLSNLYANARRWKDVARIR 747
+W +LLSS R H N+E+GE A+KL E E +Y LLSNLYA +W+DV ++R
Sbjct: 782 ADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVR 841
Query: 748 SLMKHTGIRKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILGDLIQRIKDMGYIPQTS 807
M +RK GCSW++ + +F VG++ ++I ++ L +I MGY P T
Sbjct: 842 QRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTM 901
Query: 808 FALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIHISKNLRICGDCHSALTYISMII 823
HD+ +EEK + L HSEKLA+ YG++ ++ G I + KNLRIC DCH+A IS ++
Sbjct: 902 SVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVM 961
BLAST of Sed0001312 vs. TAIR 10
Match:
AT2G22070.1 (pentatricopeptide (PPR) repeat-containing protein )
HSP 1 Score: 533.9 bits (1374), Expect = 2.3e-151
Identity = 281/728 (38.60%), Postives = 429/728 (58.93%), Query Frame = 0
Query: 130 FICNSMVAMYGRCGALDDARQVFDEVLERKIEDIVSWNSILAAYVQGGKSKTALKIAFQM 189
F N++++ Y + G +D + FD++ +R D VSW +++ Y G+ A+++ M
Sbjct: 81 FSWNTVLSAYSKRGDMDSTCEFFDQLPQR---DSVSWTTMIVGYKNIGQYHKAIRVMGDM 140
Query: 190 AKHYSFELRPDAITLVNILPACASTFASQHGRQVHGFAVRSGLGDDVFVGNALVDMYAKC 249
K + P TL N+L + A+T + G++VH F V+ GL +V V N+L++MYAKC
Sbjct: 141 VKE---GIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKC 200
Query: 250 SKMTEANKVFEHMKEKDVVSWNAIVTGYSQIGRFDDALALFQRMQEEDIELNVVTWSAVI 309
A VF+ M +D+ SWNA++ + Q+G+ D A+A F++M E DI VTW+++I
Sbjct: 201 GDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI----VTWNSMI 260
Query: 310 AGYAQRGHGFEALDVFRQMQLCG-LEPNVITLVSLLSGCASVGALLHGKQTHAYAIKNIL 369
+G+ QRG+ ALD+F +M L P+ TL S+LS CA++ L GKQ H++ +
Sbjct: 261 SGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTT-- 320
Query: 370 KLERSDLGDDL--MVINGLIDMYAKCKSSKVARNIFD----------------------- 429
G D+ +V+N LI MY++C + AR + +
Sbjct: 321 -------GFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLG 380
Query: 430 --------LITGKDKNVVTWTVMIGGYAQHGEANDAIELFSQMFKQECSLKPNAFTLSCA 489
++ KD++VV WT MI GY QHG +AI LF M +PN++TL+
Sbjct: 381 DMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGG--GQRPNSYTLAAM 440
Query: 490 LMACARLGALRLGRQIHAYALRHENESEVLYVANCLIDMYSKSGDIDAAQIVFDNMKIQ- 549
L + L +L G+QIH A++ E + V+N LI MY+K+G+I +A FD ++ +
Sbjct: 441 LSVASSLASLSHGKQIHGSAVK-SGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCER 500
Query: 550 NAVSWTSLMTGYGIHGRGEEALQVFNQMRQVGLAVDGVTFLVVLYACSHSGMVDQGMNYF 609
+ VSWTS++ HG EEAL++F M GL D +T++ V AC+H+G+V+QG YF
Sbjct: 501 DTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYF 560
Query: 610 HGMAKNFGVVPGAEHYACMVDLLGRAGRLDEAMELIESMPMEPTQVVWVALLSSSRTHAN 669
M ++P HYACMVDL GRAG L EA E IE MP+EP V W +LLS+ R H N
Sbjct: 561 DMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKN 620
Query: 670 VELGEYAASKLIESGLENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKRPGCSWVQ 729
++LG+ AA +L+ EN G+Y+ L+NLY+ +W++ A+IR MK ++K G SW++
Sbjct: 621 IDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIE 680
Query: 730 GKKSTTTFFVGDKSHPQSDQIYNILGDLIQRIKDMGYIPQTSFALHDVDDEEKGDLLFEH 789
K F V D +HP+ ++IY + + IK MGY+P T+ LHD+++E K +L H
Sbjct: 681 VKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHH 740
Query: 790 SEKLAVAYGILTSAPGQPIHISKNLRICGDCHSALTYISMIIEHEIILRDSSRFHHFKKG 823
SEKLA+A+G++++ + I KNLR+C DCH+A+ +IS ++ EII+RD++RFHHFK G
Sbjct: 741 SEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDG 786
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022960463.1 | 0.0e+00 | 90.75 | pentatricopeptide repeat-containing protein At5g16860 [Cucurbita moschata] | [more] |
XP_023514147.1 | 0.0e+00 | 90.75 | pentatricopeptide repeat-containing protein At5g16860 [Cucurbita pepo subsp. pep... | [more] |
XP_023004455.1 | 0.0e+00 | 90.63 | pentatricopeptide repeat-containing protein At5g16860 [Cucurbita maxima] >XP_023... | [more] |
KAG7025541.1 | 0.0e+00 | 90.51 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
KAG6593141.1 | 0.0e+00 | 90.51 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
Match Name | E-value | Identity | Description | |
Q9LFL5 | 2.2e-303 | 61.19 | Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana OX... | [more] |
Q9SN39 | 4.2e-158 | 37.10 | Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... | [more] |
Q3E6Q1 | 7.0e-153 | 35.40 | Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... | [more] |
Q0WN60 | 1.2e-152 | 35.22 | Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana OX... | [more] |
Q9SHZ8 | 3.3e-150 | 38.60 | Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1H912 | 0.0e+00 | 90.75 | pentatricopeptide repeat-containing protein At5g16860 OS=Cucurbita moschata OX=3... | [more] |
A0A6J1KUL7 | 0.0e+00 | 90.63 | pentatricopeptide repeat-containing protein At5g16860 OS=Cucurbita maxima OX=366... | [more] |
A0A6J1CPQ5 | 0.0e+00 | 88.56 | pentatricopeptide repeat-containing protein At5g16860 isoform X1 OS=Momordica ch... | [more] |
A0A1S3C0G3 | 0.0e+00 | 84.91 | pentatricopeptide repeat-containing protein At5g16860 OS=Cucumis melo OX=3656 GN... | [more] |
A0A6J1CP62 | 0.0e+00 | 88.81 | pentatricopeptide repeat-containing protein At5g16860 isoform X2 OS=Momordica ch... | [more] |
Match Name | E-value | Identity | Description | |
AT5G16860.1 | 1.5e-304 | 61.19 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G18750.1 | 3.0e-159 | 37.10 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G11290.1 | 5.0e-154 | 35.40 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G18485.1 | 8.5e-154 | 35.22 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT2G22070.1 | 2.3e-151 | 38.60 | pentatricopeptide (PPR) repeat-containing protein | [more] |