Sed0000742 (gene) Chayote v1

Overview


Name	Sed0000742
Type	gene
Organism	Sechium edule (Chayote v1)
Description	mitochondrial import inner membrane translocase subunit TIM10-like
Location	LG13: 19615678 .. 19618540 (-)
RNA-Seq Expression	Sed0000742
Synteny	Sed0000742

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTCACAGCCCAGCCCAAGACAAATTTCAACTATTAACTCTAAAACCCTAACGCTCATAAACACTGCACCGCCCGCCCTCCTCCTCGCATCGCCGCCGTCGGCCGCCATCTTCACCGCCGTATCGACTCCAGATCCGGTCTGCAAATTACGGTACATGATCCTCATTTCCATCTTTAATTAAGAAAATTCTACGCCACACTACAAATAAGTAATCCCTTTAAACCTAAAATCTTAAAAGCCTCACCGAGATTTGGGGAAATGATTGTAATTGCATTCTCCCAGAGATTTCGCAGCGGGATTTTGCCTCTATCAATCACTGATCGGATTCGTGGATTCCATTAATAAACAGCGTTACGATCTTCAAATTTTGCATTGGCAATTCATCTGAAGTAAGTTTGTCATTTCGGCTTGTTCTAAATAAATTGTTCCATTTTTGTGGGTATTTGAATTCCTGAGATTGTGAATTTGTTTGATTCAGAGTCTCAATGGCTTCTCCTAACGATATGCCATCGGCTGTGGACAAGGAACAGGTTGGTTTCTATGTCTTGTATTCGTTTTTCTTTACGTTCTTGCACATTCATAGCTATGATTTGGGATTCTAGTGTTTGGAATGAGTACATTGAGAGTATCCCAGATCAAGAGTGGAATCCGTGTTCTTATTCTGGTGGGTTTCTTCAAATTGGACTAATGTTCGTGTCCCCAACGGGTGACACAGTGGTTGAAGACTTGATCTTTGAAGGTATGAGGGTATGTACTCCTCTAGGTCCTAGGTTCGATACTCAGCTGTGACATTACTCCTTCCATATCTCCCGGTGTCTGGCTTAGAGACATATGTAGTTACTCTTGTTTCAAAAAATAAAATTGGACTAATATTAGTTACGAAGGAGTATGGTAAACGTTTCATCAATTGTGTGAAAGCCTGTCAATAGGTATCTAGGTTTCAAGCTCTAATCTCTTTTATGGTTTAATCTATCCAGTTGCTGAATTCTGTTCATTTAGAGTGATGAATATTTTCAGTTGATTAGCTTTTTGTTAATTCTTAAAACAATGTAGTTATATTTAGAATGTAGTTCATAAATTCGCAATTATCATCATTACAATTTAATTTTGAAATTTTTGCATTTGAGCAGATATTTGGTATGGCAGAAAAGGAGATGGAATATCGAGTTGAATTATTCAACAAGTAGGTTTTATTCCATATCTTCTTTTATTTTTCACCTTTTATTAAATAAGAGATGCATTGTAATAATTTTATCATGGTGGAAGATTCTATATTTGTTGTTTTATTGAGATATCTGAGCTTCATGCTTGATGCTTCTACCTTCTTCATAGAATTTAATCTTTATGCTTTTGTTTTTCTCTGTCTTTTTCAGGCTTACACACTCATGTTTTAACAAATGTGTTGATAAGAGGTAGGATACTAGTCCTACTCCTTCATTTCTATACTTGAATATTGCATATTTCCTAATTTCCCAAGGTTTTAGTTTTGGCATTATAGAATTAATTTTATCTCTATTCATTTTGAGAGTTATGCATGGTTATTTTTGTTTGTGATTTAACATTTACTATTTATTTTAGGTACAAGGAGTCTGAGCTGAATATGGGTGAAAATAGTTGCATTGACCGCTGTGTTTCCAAGTATTGGCATGTAAGTTAATTTTTACCTTTTATGCTCTGTATGTCCTTTAGTGATGAGATATGTGATGATCAAATAGTACAGAAGCAATTGCCAGCAAGAGCTTAGGTCAACTGATAACCAAGAGGTTATGGGTTTAAATCATCCTCAAATGTTGTATTAAAAAAAACAAATAGTACAGAAAGCAAGAGGGTTATGAACCAGAGCATTGTTGATATAATTCATCAAGGTTATTATGAAGTTCATCAAGGTTTATTATGAAGGGTTATAAACCAAATGAACCACACCCAAATGAAATTGAATTTTAAAAAATGACTTTTTATTATGAAGTTCATCATGGTTTTTTTTTCTTGACTTTGACGAGTGGTTGCGTATTTGCTAAACGAAACAAGGTGTCTTCAGATAGGAGTAAGACAAGCCATTGGTGATATAATTCATCATATTATGAGCCTGAATTTTCTGTAGAGTTAAAGCACTCTCTTAAGTTCCAAATTATAGAAATTTCATACAGCTATATCCATGTGATCAAACTCTTGTATAGAAGATCAATTGGATTGCATTTTATTCTGAACTGGCATTTCATGATTGATGAGCATACACACAGTTTCTCCTACAACTTATAATGCTCACTTTGACATTTTCTTGTAAAATTCACTCCCCCTAACTTTATCGATGATCGATTCTTTGATTCGGCCTATTTACAATCAAATAACATATTTTCTGGAACTTGCATTATCATTTGTTAACTACTTGACTCTATGCTTCAGGTAACCAATTTAGTCGGCCAGCTACTCGGCTCGGGCAGACCTCCAATGTGACTTGCTTCCTGATCTGAGTAATTGCTTAGTGAGTTTGGAATGAAGAACTTTGATTCATGCATTTTTTGGTCTGATTAATTTTCCATCTCACTTAAATGACTTGTTTTTCTGTTCAAGGAAAAGTATGGATGATAATGGCAGATTCTAGTAATTTTTACAGTTTTCTTCACTCCATTTTCTCTTCAGTTTATTTTTCCAGATAAATATAAGATTGGGTCTCCATACCCTTTTTATTTTCGTTGCTCAAGATTATAGCGGCTGCATCTATACATCGCCACTATCTTTCTTGTCAATTCCTTAATTTCAGTGTCTGAAAAGGAAGGCTTAATAATGTGTCTAATTGTACTTTGCCTTGAGAATATTTTAGTGTTTGGACTCCATTTATATAAATCACTTTTGAGGCATAC

mRNA sequence

CTCTCACAGCCCAGCCCAAGACAAATTTCAACTATTAACTCTAAAACCCTAACGCTCATAAACACTGCACCGCCCGCCCTCCTCCTCGCATCGCCGCCGTCGGCCGCCATCTTCACCGCCGTATCGACTCCAGATCCGGTCTGCAAATTACGCCTCACCGAGATTTGGGGAAATGATTGTAATTGCATTCTCCCAGAGATTTCGCAGCGGGATTTTGCCTCTATCAATCACTGATCGGATTCGTGGATTCCATTAATAAACAGCGTTACGATCTTCAAATTTTGCATTGGCAATTCATCTGAAAGTCTCAATGGCTTCTCCTAACGATATGCCATCGGCTGTGGACAAGGAACAGATATTTGGTATGGCAGAAAAGGAGATGGAATATCGAGTTGAATTATTCAACAAGCTTACACACTCATGTTTTAACAAATGTGTTGATAAGAGGTACAAGGAGTCTGAGCTGAATATGGGTGAAAATAGTTGCATTGACCGCTGTGTTTCCAAGTATTGGCATGTAACCAATTTAGTCGGCCAGCTACTCGGCTCGGGCAGACCTCCAATGTGACTTGCTTCCTGATCTGAGTAATTGCTTAGTGAGTTTGGAATGAAGAACTTTGATTCATGCATTTTTTGGTCTGATTAATTTTCCATCTCACTTAAATGACTTGTTTTTCTGTTCAAGGAAAAGTATGGATGATAATGGCAGATTCTAGTAATTTTTACAGTTTTCTTCACTCCATTTTCTCTTCAGTTTATTTTTCCAGATAAATATAAGATTGGGTCTCCATACCCTTTTTATTTTCGTTGCTCAAGATTATAGCGGCTGCATCTATACATCGCCACTATCTTTCTTGTCAATTCCTTAATTTCAGTGTCTGAAAAGGAAGGCTTAATAATGTGTCTAATTGTACTTTGCCTTGAGAATATTTTAGTGTTTGGACTCCATTTATATAAATCACTTTTGAGGCATAC

Coding sequence (CDS)

ATGGCTTCTCCTAACGATATGCCATCGGCTGTGGACAAGGAACAGATATTTGGTATGGCAGAAAAGGAGATGGAATATCGAGTTGAATTATTCAACAAGCTTACACACTCATGTTTTAACAAATGTGTTGATAAGAGGTACAAGGAGTCTGAGCTGAATATGGGTGAAAATAGTTGCATTGACCGCTGTGTTTCCAAGTATTGGCATGTAACCAATTTAGTCGGCCAGCTACTCGGCTCGGGCAGACCTCCAATGTGA

Protein sequence

MASPNDMPSAVDKEQIFGMAEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQLLGSGRPPM

Homology

[Close]

BLAST of Sed0000742 vs. NCBI nr
Match: XP_038894964.1 (mitochondrial import inner membrane translocase subunit TIM10 [Benincasa hispida])

HSP 1 Score: 181.4 bits (459), Expect = 3.2e-42
Identity = 83/85 (97.65%), Postives = 85/85 (100.00%), Query Frame = 0


Query: 1  MASPNDMPSAVDKEQIFGMAEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCI 60
          MASPN+MPSAVDKEQIFGMAEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCI
Sbjct: 1  MASPNNMPSAVDKEQIFGMAEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCI 60

Query: 61 DRCVSKYWHVTNLVGQLLGSGRPPM 86
          DRCVSKYWHVTNL+GQLLGSGRPPM
Sbjct: 61 DRCVSKYWHVTNLIGQLLGSGRPPM 85

[Close]

BLAST of Sed0000742 vs. NCBI nr
Match: XP_022970585.1 (mitochondrial import inner membrane translocase subunit TIM10-like [Cucurbita maxima])

HSP 1 Score: 179.5 bits (454), Expect = 1.2e-41
Identity = 83/85 (97.65%), Postives = 84/85 (98.82%), Query Frame = 0


Query: 1  MASPNDMPSAVDKEQIFGMAEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCI 60
          MASPNDMPSA+DKEQIFGMAEKEMEYRVELFNKLT SCFNKCVDKRYKESELNMGENSCI
Sbjct: 1  MASPNDMPSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCI 60

Query: 61 DRCVSKYWHVTNLVGQLLGSGRPPM 86
          DRCVSKYWHVTNLVGQLLGSGRPPM
Sbjct: 61 DRCVSKYWHVTNLVGQLLGSGRPPM 85

[Close]

BLAST of Sed0000742 vs. NCBI nr
Match: XP_004145269.1 (mitochondrial import inner membrane translocase subunit TIM10 [Cucumis sativus] >XP_008457418.1 PREDICTED: mitochondrial import inner membrane translocase subunit TIM10 [Cucumis melo] >KGN65773.1 hypothetical protein Csa_023233 [Cucumis sativus] >TYJ97353.1 mitochondrial import inner membrane translocase subunit TIM10-like [Cucumis melo var. makuwa])

HSP 1 Score: 178.3 bits (451), Expect = 2.7e-41
Identity = 82/85 (96.47%), Postives = 84/85 (98.82%), Query Frame = 0


Query: 1  MASPNDMPSAVDKEQIFGMAEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCI 60
          MASPN+MPSAVDKEQIFGMAEKEMEYRVELFNKLT SCFNKCVDKRYKESELNMGENSCI
Sbjct: 1  MASPNNMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCI 60

Query: 61 DRCVSKYWHVTNLVGQLLGSGRPPM 86
          DRCVSKYWHVTNL+GQLLGSGRPPM
Sbjct: 61 DRCVSKYWHVTNLIGQLLGSGRPPM 85

[Close]

BLAST of Sed0000742 vs. NCBI nr
Match: XP_022964898.1 (mitochondrial import inner membrane translocase subunit TIM10-like [Cucurbita moschata] >KAG7019162.1 Mitochondrial import inner membrane translocase subunit TIM10, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 176.4 bits (446), Expect = 1.0e-40
Identity = 82/85 (96.47%), Postives = 83/85 (97.65%), Query Frame = 0


Query: 1  MASPNDMPSAVDKEQIFGMAEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCI 60
          MASPNDM SA+DKEQIFGMAEKEMEYRVELFNKLT SCFNKCVDKRYKESELNMGENSCI
Sbjct: 1  MASPNDMQSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCI 60

Query: 61 DRCVSKYWHVTNLVGQLLGSGRPPM 86
          DRCVSKYWHVTNLVGQLLGSGRPPM
Sbjct: 61 DRCVSKYWHVTNLVGQLLGSGRPPM 85

[Close]

BLAST of Sed0000742 vs. NCBI nr
Match: KAG6583395.1 (Mitochondrial import inner membrane translocase subunit TIM10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 176.4 bits (446), Expect = 1.0e-40
Identity = 82/85 (96.47%), Postives = 83/85 (97.65%), Query Frame = 0


Query: 1   MASPNDMPSAVDKEQIFGMAEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCI 60
           MASPNDM SA+DKEQIFGMAEKEMEYRVELFNKLT SCFNKCVDKRYKESELNMGENSCI
Sbjct: 24  MASPNDMQSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCI 83

Query: 61  DRCVSKYWHVTNLVGQLLGSGRPPM 86
           DRCVSKYWHVTNLVGQLLGSGRPPM
Sbjct: 84  DRCVSKYWHVTNLVGQLLGSGRPPM 108

[Close]

BLAST of Sed0000742 vs. ExPASy Swiss-Prot
Match: Q9ZW33 (Mitochondrial import inner membrane translocase subunit TIM10 OS=Arabidopsis thaliana OX=3702 GN=TIM10 PE=1 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 1.2e-31
Identity = 63/85 (74.12%), Postives = 71/85 (83.53%), Query Frame = 0


Query: 1  MASPNDMPSAVDKEQIFGMAEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCI 60
          MASP  +P  V KEQ F MA+ EMEYRVELFNKL  +CFNKCVDKRYKE+ELNMGENSCI
Sbjct: 1  MASP--IPVGVTKEQAFSMAQTEMEYRVELFNKLAQTCFNKCVDKRYKEAELNMGENSCI 60

Query: 61 DRCVSKYWHVTNLVGQLLGSGRPPM 86
          DRCVSKYW V  +VGQLL +G+PP+
Sbjct: 61 DRCVSKYWQVNGMVGQLLSAGKPPV 83

[Close]

BLAST of Sed0000742 vs. ExPASy Swiss-Prot
Match: Q9W2D6 (Mitochondrial import inner membrane translocase subunit Tim10 OS=Drosophila melanogaster OX=7227 GN=Tim10 PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 3.1e-11
Identity = 30/70 (42.86%), Postives = 45/70 (64.29%), Query Frame = 0


Query: 9  SAVDKEQIFGMAEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCIDRCVSKYW 68
          S  D+ ++  M E E+E   +L+N++T++C  KC+  RY ESEL  GE  CIDRCV+KY 
Sbjct: 7  STADQAKLQLMQEMEIEMMSDLYNRMTNACHKKCIPPRYSESELGKGEMVCIDRCVAKYL 66

Query: 69 HVTNLVGQLL 79
           +   +G+ L
Sbjct: 67 DIHEKIGKKL 76

[Close]

BLAST of Sed0000742 vs. ExPASy Swiss-Prot
Match: P87108 (Mitochondrial import inner membrane translocase subunit TIM10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TIM10 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 6.8e-11
Identity = 27/66 (40.91%), Postives = 43/66 (65.15%), Query Frame = 0


Query: 11 VDKEQIFGMAEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHV 70
          +  +Q    AE E++   ++FNKL ++C+ KC++  Y E ELN  E+SC+DRCV+KY+  
Sbjct: 13 LSSQQKIQAAEAELDLVTDMFNKLVNNCYKKCINTSYSEGELNKNESSCLDRCVAKYFET 72

Query: 71 TNLVGQ 77
             VG+
Sbjct: 73 NVQVGE 78

[Close]

BLAST of Sed0000742 vs. ExPASy Swiss-Prot
Match: Q759W7 (Mitochondrial import inner membrane translocase subunit TIM10 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=TIM10 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.0e-10
Identity = 26/66 (39.39%), Postives = 41/66 (62.12%), Query Frame = 0


Query: 11 VDKEQIFGMAEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHV 70
          +  +Q    AE E++   ++FNKL  +C  KC+D  Y E +LN  E++C+DRCV+KY+  
Sbjct: 10 LSSQQKIAAAEAELDLVTDMFNKLVSNCHRKCIDMNYNEGDLNKNESNCLDRCVAKYFET 69

Query: 71 TNLVGQ 77
             VG+
Sbjct: 70 NVKVGE 75

[Close]

BLAST of Sed0000742 vs. ExPASy Swiss-Prot
Match: Q2NKR1 (Mitochondrial import inner membrane translocase subunit Tim10 OS=Bos taurus OX=9913 GN=TIMM10 PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 2.6e-10
Identity = 27/59 (45.76%), Postives = 41/59 (69.49%), Query Frame = 0


Query: 20 AEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQLL 79
          AE E+E   +++N++T +C  KCV   YKE+EL+ GE+ C+DRCVSKY  +   +G+ L
Sbjct: 11 AELEVEMMADMYNRMTSACHRKCVPPHYKEAELSKGESVCLDRCVSKYLDIHERMGKKL 69

[Close]

BLAST of Sed0000742 vs. ExPASy TrEMBL
Match: A0A6J1I395 (mitochondrial import inner membrane translocase subunit TIM10-like OS=Cucurbita maxima OX=3661 GN=LOC111469520 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 6.0e-42
Identity = 83/85 (97.65%), Postives = 84/85 (98.82%), Query Frame = 0


Query: 1  MASPNDMPSAVDKEQIFGMAEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCI 60
          MASPNDMPSA+DKEQIFGMAEKEMEYRVELFNKLT SCFNKCVDKRYKESELNMGENSCI
Sbjct: 1  MASPNDMPSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCI 60

Query: 61 DRCVSKYWHVTNLVGQLLGSGRPPM 86
          DRCVSKYWHVTNLVGQLLGSGRPPM
Sbjct: 61 DRCVSKYWHVTNLVGQLLGSGRPPM 85

[Close]

BLAST of Sed0000742 vs. ExPASy TrEMBL
Match: A0A5D3BDG9 (Mitochondrial import inner membrane translocase subunit TIM10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001630 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.3e-41
Identity = 82/85 (96.47%), Postives = 84/85 (98.82%), Query Frame = 0


Query: 1  MASPNDMPSAVDKEQIFGMAEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCI 60
          MASPN+MPSAVDKEQIFGMAEKEMEYRVELFNKLT SCFNKCVDKRYKESELNMGENSCI
Sbjct: 1  MASPNNMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCI 60

Query: 61 DRCVSKYWHVTNLVGQLLGSGRPPM 86
          DRCVSKYWHVTNL+GQLLGSGRPPM
Sbjct: 61 DRCVSKYWHVTNLIGQLLGSGRPPM 85

[Close]

BLAST of Sed0000742 vs. ExPASy TrEMBL
Match: A0A0A0LVG1 (zf-Tim10_DDP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G527890 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.3e-41
Identity = 82/85 (96.47%), Postives = 84/85 (98.82%), Query Frame = 0


Query: 1  MASPNDMPSAVDKEQIFGMAEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCI 60
          MASPN+MPSAVDKEQIFGMAEKEMEYRVELFNKLT SCFNKCVDKRYKESELNMGENSCI
Sbjct: 1  MASPNNMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCI 60

Query: 61 DRCVSKYWHVTNLVGQLLGSGRPPM 86
          DRCVSKYWHVTNL+GQLLGSGRPPM
Sbjct: 61 DRCVSKYWHVTNLIGQLLGSGRPPM 85

[Close]

BLAST of Sed0000742 vs. ExPASy TrEMBL
Match: A0A1S3C655 (mitochondrial import inner membrane translocase subunit TIM10 OS=Cucumis melo OX=3656 GN=LOC103497109 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.3e-41
Identity = 82/85 (96.47%), Postives = 84/85 (98.82%), Query Frame = 0


Query: 1  MASPNDMPSAVDKEQIFGMAEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCI 60
          MASPN+MPSAVDKEQIFGMAEKEMEYRVELFNKLT SCFNKCVDKRYKESELNMGENSCI
Sbjct: 1  MASPNNMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCI 60

Query: 61 DRCVSKYWHVTNLVGQLLGSGRPPM 86
          DRCVSKYWHVTNL+GQLLGSGRPPM
Sbjct: 61 DRCVSKYWHVTNLIGQLLGSGRPPM 85

[Close]

BLAST of Sed0000742 vs. ExPASy TrEMBL
Match: A0A6J1HM98 (mitochondrial import inner membrane translocase subunit TIM10-like OS=Cucurbita moschata OX=3662 GN=LOC111464866 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 5.0e-41
Identity = 82/85 (96.47%), Postives = 83/85 (97.65%), Query Frame = 0


Query: 1  MASPNDMPSAVDKEQIFGMAEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCI 60
          MASPNDM SA+DKEQIFGMAEKEMEYRVELFNKLT SCFNKCVDKRYKESELNMGENSCI
Sbjct: 1  MASPNDMQSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCI 60

Query: 61 DRCVSKYWHVTNLVGQLLGSGRPPM 86
          DRCVSKYWHVTNLVGQLLGSGRPPM
Sbjct: 61 DRCVSKYWHVTNLVGQLLGSGRPPM 85

[Close]

BLAST of Sed0000742 vs. TAIR 10
Match: AT2G29530.1 (Tim10/DDP family zinc finger protein )

HSP 1 Score: 136.7 bits (343), Expect = 8.5e-33
Identity = 63/85 (74.12%), Postives = 71/85 (83.53%), Query Frame = 0


Query: 1  MASPNDMPSAVDKEQIFGMAEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCI 60
          MASP  +P  V KEQ F MA+ EMEYRVELFNKL  +CFNKCVDKRYKE+ELNMGENSCI
Sbjct: 1  MASP--IPVGVTKEQAFSMAQTEMEYRVELFNKLAQTCFNKCVDKRYKEAELNMGENSCI 60

Query: 61 DRCVSKYWHVTNLVGQLLGSGRPPM 86
          DRCVSKYW V  +VGQLL +G+PP+
Sbjct: 61 DRCVSKYWQVNGMVGQLLSAGKPPV 83

[Close]

BLAST of Sed0000742 vs. TAIR 10
Match: AT2G29530.2 (Tim10/DDP family zinc finger protein )

HSP 1 Score: 136.7 bits (343), Expect = 8.5e-33
Identity = 63/85 (74.12%), Postives = 71/85 (83.53%), Query Frame = 0


Query: 1  MASPNDMPSAVDKEQIFGMAEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCI 60
          MASP  +P  V KEQ F MA+ EMEYRVELFNKL  +CFNKCVDKRYKE+ELNMGENSCI
Sbjct: 1  MASP--IPVGVTKEQAFSMAQTEMEYRVELFNKLAQTCFNKCVDKRYKEAELNMGENSCI 60

Query: 61 DRCVSKYWHVTNLVGQLLGSGRPPM 86
          DRCVSKYW V  +VGQLL +G+PP+
Sbjct: 61 DRCVSKYWQVNGMVGQLLSAGKPPV 83

[Close]

BLAST of Sed0000742 vs. TAIR 10
Match: AT2G29530.3 (Tim10/DDP family zinc finger protein )

HSP 1 Score: 121.3 bits (303), Expect = 3.7e-28
Identity = 62/109 (56.88%), Postives = 70/109 (64.22%), Query Frame = 0


Query: 1   MASPNDMPSAVDKEQIFGMAEKEMEYRVELFNK------------------------LTH 60
           MASP  +P  V KEQ F MA+ EMEYRVELFN                         L  
Sbjct: 1   MASP--IPVGVTKEQAFSMAQTEMEYRVELFNNDIYKLEEYKFETADMSKILRLPELLAQ 60

Query: 61  SCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQLLGSGRPPM 86
           +CFNKCVDKRYKE+ELNMGENSCIDRCVSKYW V  +VGQLL +G+PP+
Sbjct: 61  TCFNKCVDKRYKEAELNMGENSCIDRCVSKYWQVNGMVGQLLSAGKPPV 107

The following BLAST results are available for this feature:

BLAST of Sed0000742 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038894964.1	3.2e-42	97.65	mitochondrial import inner membrane translocase subunit TIM10 [Benincasa hispida...	[more]
XP_022970585.1	1.2e-41	97.65	mitochondrial import inner membrane translocase subunit TIM10-like [Cucurbita ma...	[more]
XP_004145269.1	2.7e-41	96.47	mitochondrial import inner membrane translocase subunit TIM10 [Cucumis sativus] ...	[more]
XP_022964898.1	1.0e-40	96.47	mitochondrial import inner membrane translocase subunit TIM10-like [Cucurbita mo...	[more]
KAG6583395.1	1.0e-40	96.47	Mitochondrial import inner membrane translocase subunit TIM10, partial [Cucurbit...	[more]

BLAST of Sed0000742 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZW33	1.2e-31	74.12	Mitochondrial import inner membrane translocase subunit TIM10 OS=Arabidopsis tha...	[more]
Q9W2D6	3.1e-11	42.86	Mitochondrial import inner membrane translocase subunit Tim10 OS=Drosophila mela...	[more]
P87108	6.8e-11	40.91	Mitochondrial import inner membrane translocase subunit TIM10 OS=Saccharomyces c...	[more]
Q759W7	2.0e-10	39.39	Mitochondrial import inner membrane translocase subunit TIM10 OS=Ashbya gossypii...	[more]
Q2NKR1	2.6e-10	45.76	Mitochondrial import inner membrane translocase subunit Tim10 OS=Bos taurus OX=9...	[more]

BLAST of Sed0000742 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I395	6.0e-42	97.65	mitochondrial import inner membrane translocase subunit TIM10-like OS=Cucurbita ...	[more]
A0A5D3BDG9	1.3e-41	96.47	Mitochondrial import inner membrane translocase subunit TIM10-like OS=Cucumis me...	[more]
A0A0A0LVG1	1.3e-41	96.47	zf-Tim10_DDP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G52789...	[more]
A0A1S3C655	1.3e-41	96.47	mitochondrial import inner membrane translocase subunit TIM10 OS=Cucumis melo OX...	[more]
A0A6J1HM98	5.0e-41	96.47	mitochondrial import inner membrane translocase subunit TIM10-like OS=Cucurbita ...	[more]

BLAST of Sed0000742 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G29530.1	8.5e-33	74.12	Tim10/DDP family zinc finger protein	[more]
AT2G29530.2	8.5e-33	74.12	Tim10/DDP family zinc finger protein	[more]
AT2G29530.3	3.7e-28	56.88	Tim10/DDP family zinc finger protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004217	Tim10-like	PFAM	PF02953	zf-Tim10_DDP	coord: 19..77 e-value: 5.9E-21 score: 73.8
IPR035427	Tim10-like domain superfamily	GENE3D	1.10.287.810	Mitochondrial import inner membrane translocase subunit tim13 like domains	coord: 11..80 e-value: 4.9E-24 score: 85.6
IPR035427	Tim10-like domain superfamily	SUPERFAMILY	144122	Tim10-like	coord: 23..79
None	No IPR available	PANTHER	PTHR11038:SF22	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM10-LIKE	coord: 4..85
None	No IPR available	PANTHER	PTHR11038	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM10	coord: 4..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0000742.1	Sed0000742.1	mRNA
Sed0000742.2	Sed0000742.2	mRNA
Sed0000742.3	Sed0000742.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045039	protein insertion into mitochondrial inner membrane
cellular_component	GO:0005743	mitochondrial inner membrane
molecular_function	GO:0008270	zinc ion binding