Pay0020653 (gene) Melon (Payzawat) v1

Overview


Name	Pay0020653
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Gag-pol polyprotein
Location	chr03: 10829760 .. 10833255 (+)
RNA-Seq Expression	Pay0020653
Synteny	Pay0020653

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGTAATATCTTCTCTAAAGTTAAAACTAAGAGAAGTTCAGAATGAGAATGATCAGATTTTAAAATCCGTTAAAATGCTAAACTCAGGAACGAAGAATCTAGATTCAATACTTAAGTCTGGACATAATGGTTCTCATAGATATGGGTTGGGATTTGTGGCCTCTGCAAGTAGTCTTAAAGCTACATCAGAAATCAAGTTTGTTCCTGCCTCAATGAGAGTTGAACATGAAACAATTCATACAGAGACTGGCATCAGGACTGCAATTAAATCTCTTGGGAGAACGTGTTACTATTGTGGTCGAAAAGGTCATATCAGGTCAATTTGTTATAAATTAAGGCAAGACCAGTTGCGTCAACAGAAATACTAGAATAGGAGCCATGCACAACCTCGCATTGTCTGGAGAATTAAATCTGCTGAAAGATGTAAGATTGCCTTTACATCCGTTCAGACCGCAGATGATGCGTGGTATTTTGATAGTCGGTGCTCCAAAGACTGTGTCACCGGACATGTTACCTTTGGTGATGGTACAAAAGGAAAAATTATAGCTAAAGGTAACATAGACAAAAATAACCTACCACGTCTAAACGATGTTAGGTATGTGGATGGACTAAAAGCAAACTTGATCAATATAAGTCAATTATGTGATCAAGGCTACAAAGTTAGTTTAGATGATATTGGTTGTGTTGTGATAAATAAAGAAAATCAAATTTGTATGAGTGGAAAACAACAGACTGATAACTATTACCACTGGAACTCAATTACGTCAGACACCTGTCAGTTGACAAGATCAGATCAAACATGGCTATGACATAAATAGCTGGGGCATGTCAGTATGAAAGGCTTGGAAAAAGTCATTAAAAATGAAGCAATTTTGGAAATTCTTGATTTAGACGTAAATAGAAAATTCTTCTGTGGAGACTGTCAAATTAGCAAGCAGACAAGGTCTACTCATAAAAGTCTGAAAGAATGTTATACAAATAGAGTTTTGGAATTGTTACATATGGATCTCATGGGTCCAATGCAAACAGAAAGTCTAAGAGGAAAGAGGTATATGCTGGTTGTAGTTGATGATTACTCAAGATATACTTGGGTTTGCTTTCCCAAAGGAAAAACAGATACTGTTGAAATATGCAAAAATTTGTGTTTGAAGCTACAACGTGAAAAAGGGAAGAAGATAACGAGGATCCGAAGTGATCATGGTAAAGATTTTGATAATGAAGGCTTTAACAGTTTTTGTCTGTGAGAAGGAATACACCATTAAGTTTCTGCACCTACCCTCAACAAAATGGTGTAGCAGAAAGAAAGAACAGGACGTTACAAGAAATGACACGTGTTATGATACATGCCAAAAATTTACCTCTATGTTTTTGGGCAGAAGCTGTAAATACTACCTGTCACATTCATAATAGGGTAACTATTAGAACTGGAATGACTGTTACTCTTTATGAACTTTGGAAAGAGAGAGAGCCAAATATTAAATACTTCCATGTGTTTGGAAGTACATGTTATATCTTAGCTGACAAGGAATACCGTCAGAAATGGGATGCAAGGTCAGAACAAGGAATCTTTCTCGGGTACTCTCAGAACAGTCGAGCCTATAAAGTCTTCAATAACAGATCTGAAAGTGTTATGGAAACAATCAATGTAGTTATAAATGATCTCGATTCAGCTATCAAACAGATGAATGATGAGGAAGATGAGACTCCAAACATGTCTGAAGCTAGCACTACGAGTACTGTAGAAGTTTCTAAAGCTGATAACCCATCTGATGATCCAGGCAAAAGTTTGAAAAAGTCATCAGAAGAAATTATCACTAAAAATTAGAACTAATTCCATCTAATTATGTAAAGAAAAATCATCTAGCAAGCTCTATTATTGGTGGTTCGTCAGCTGGGATGCAAACCAAAAGGAAAGAAAAGATTGATTATATGAAGATGGTTGTTGATTTATGTTATAATTCCACCATTGAACCTTCTACTGTTCACTCTGCTCTCAAGGATGAGTATTGGCTAAATGCTATGCAAGAGGAGCTACTCCAATTCAGACGAAACAATGTCTGAACGTTAGTTTCAAAGCCAGAAGGTGTAAACGTTATTGGCACCAAATGGGTGTTTAAAAATAAGACTGATGAAGCTGGATGTGTGACGAAAAATAAAGCCAGATTAGTAGCTCAAGGGTATAATCAAGTTGAAGGTATTGAATTTGATGAAACGTTTGCTCCTGTTGCTCGACTTGAAGCCATTCAATTATTACTTGGTATATCATGCATACAGAAATTTAAATTGTATCAGATAGATGTAAAGAGTGTCTTCTTAAATGATTATTTGAATGAGGAGGTTTATGTTGCTCAACCAAAAGGTTTTGTTGATTCTGAGCATCCGAAGCATGTGTATAAGCTCAACAAATCTTTATATGGGCTAAAGCAAGCTCCGAGAGCTTGGTATGAACGGCTAACTGTTTACTTGAAAGGTAAAGAATATTCCAGAGGAGAAATTGTCAAGACCTTGTTTATACACAGGAAATCTGATCAACTTTTGGTTGCTCAAATTTATGTTGATGTCATCATTTTTGGAGGTTTTCCTCAAGATCTAGTAAATAATTTCATTAACATCATGCAGTCAGAATTCGAAATGAGCATGGTTGGAGAACTTTCATACTTTTTGGGTCTTCAAATTAAGCAAAAGAATGATGGCATCTTCATATCTCAGGAAAAGTATGCCAAGGATATGGTTAAAAAGTTTGGTTTGGAACAGGCTCGAAATAAGCGGACTCCAGCTGCGGCACATGTTAAACTTACAAGAGACACTGATGGTGCTGAAGTTGGTCACAAACTCTACAGGAGTATAGTAGGCAGCTTATTATATTTAACAGCAAGTCGACCTGACATAGCTTATGTTGTGGGAATATGTGCTCGTTTTCAAGCGGATCCCTGCATCTCTCACTTAGAAGTTGTTAAACGAATTCTTAAGTATGTTCATGGGACCAGTGACTTTGGAATGATGTATTTCTATGGTACCACCCCCACTCTTGTTGGATATTGTGATGCTGACTGGACAGGTTCAGCTGATGATCGTAAAAGTACGTCTGAAGGATGTTTCTTTTTAGGAAACAACTTAATTTCTTGGTTAAGTAAGAAGCAAAACTGTGTCTCTTTATCTACAGCTGAAGCGGAATATATAGCAACAGGTAGTGGTTGCACACAGTTGATTTGGATGAAAAATATGTTGCATGAATATCGCTTTGATCAAGACACTATGACGTTGTATTATGACAATATGAGCGCAATTGATATATCGAAGAATCCTATTCAACATAGTCGAACAAAGCACATTGACATAAGACATCACTTTATTCATGAACTTGTTGAAGATAAAGTAATTAAGCTTGATCATATTTCTTCCAACTTACAATCAGTCGATATTTTCACTAAACCTCTGGATGCGAACTCATTTGAATACTTACGTGCTGATTTAGGAGTGTGTCTTACTTAA

mRNA sequence

ATGTCTGTAATATCTTCTCTAAAGTTAAAACTAAGAGAAGTTCAGAATGAGAATGATCAGATTTTAAAATCCGTTAAAATGCTAAACTCAGGAACGAAGAATCTAGATTCAATACTTAAGTCTGGACATAATGGTTCTCATAGATATGGGTTGGGATTTGTGGCCTCTGCAAGTAGAGCCATGCACAACCTCGCATTGTCTGGAGAATTAAATCTGCTGAAAGATGTAAGATTGCCTTTACATCCGTTCAGACCGCAGATGATGCACTGTGTCACCGGACATGTTACCTTTGGTGATGGTACAAAAGGAAAAATTATAGCTAAAGGTAACATAGACAAAAATAACCTACCACGTCTAAACGATCTGGGGCATGTCAGTATGAAAGGCTTGGAAAAAGTCATTAAAAATGAAGCAATTTTGGAAATTCTTGATTTAGACGTAAATAGAAAATTCTTCTGTGGAGACTGTCAAATTAGCAAGCAGACAAGGTCTACTCATAAAAGTCTGAAAGAATGTTATACAAATAGAGTTTTGGAATTGTTACATATGGATCTCATGGGTCCAATGCAAACAGAAAGTCTAAGAGGAAAGAGGTATATGCTGGTTGTAGTTGATGATTACTCAAGATATACTTGGGTTTGCTTTCCCAAAGGAAAAACAGATACTGTTGAAATATGCAAAAATTTGTGTTTGAAGCTACAACGTGAAAAAGGGAAGAAGATAACGAGGATCCGAAGTGATCATGGTAAAGATTTTGATAATGAAGGCTTTAACAGTTTTTCAGAAAGAAAGAACAGGACGTTACAAGAAATGACACGTGTTATGATACATGCCAAAAATTTACCTCTATGTTTTTGGGCAGAAGCTGTAAATACTACCTGTCACATTCATAATAGGGTAACTATTAGAACTGGAATGACTGTTACTCTTTATGAACTTTGGAAAGAGAGAGAGCCAAATATTAAATACTTCCATGTGTTTGGAAGTACATGTTATATCTTAGCTGACAAGGAATACCGTCAGAAATGGGATGCAAGGTCAGAACAAGGAATCTTTCTCGGGTACTCTCAGAACAGTCGAGCCTATAAAGTCTTCAATAACAGATCTGAAAGTGTTATGGAAACAATCAATGTAGTTATAAATGATCTCGATTCAGCTATCAAACAGATGAATGATGAGGAAGATGAGACTCCAAACATGTCTGAAGCTAGCACTACGAGTACTGTAGAAGTTTCTAAAGCTGATAACCCATCTGATGATCCAGGCAAAAGTTTGAAAAACTCTATTATTGGTGGTTCGTCAGCTGGGATGCAAACCAAAAGGAAAGAAAAGATTGATTATATGAAGATGGTTGTTGATTTATGTTATAATTCCACCATTGAACCTTCTACTGTTCACTCTGCTCTCAAGGATGAGTATTGGCTAAATGCTATGCAAGAGGAGCTACTCCAATTCAGACGAAACAATACTGATGAAGCTGGATGTGTGACGAAAAATAAAGCCAGATTAGTAGCTCAAGGGTATAATCAAGTTGAAGGTATTGAATTTGATGAAACGTTTGCTCCTGTTGCTCGACTTGAAGCCATTCAATTATTACTTGGTATATCATGCATACAGAAATTTAAATTGTATCAGATAGATGTAAAGAGTGTCTTCTTAAATGATTATTTGAATGAGGAGGTTTATGTTGCTCAACCAAAAGGTTTTGTTGATTCTGAGCATCCGAAGCATGTGTATAAGCTCAACAAATCTTTATATGGGCTAAAGCAAGCTCCGAGAGCTTGGTATGAACGGCTAACTGTTTACTTGAAAGGTAAAGAATATTCCAGAGGAGAAATTGTCAAGACCTTGTTTATACACAGGAAATCTGATCAACTTTTGGTTGCTCAAATTTATGTTGATGTCATCATTTTTGGAGGTTTTCCTCAAGATCTAGTAAATAATTTCATTAACATCATGCAGTCAGAATTCGAAATGAGCATGGTTGGAGAACTTTCATACTTTTTGGGTCTTCAAATTAAGCAAAAGAATGATGGCATCTTCATATCTCAGGAAAAGTATGCCAAGGATATGGTTAAAAAGTTTGGTTTGGAACAGGCTCGAAATAAGCGGACTCCAGCTGCGGCACATGTTAAACTTACAAGAGACACTGATGGTGCTGAAGTTGGTCACAAACTCTACAGGAGTATAGTAGGCAGCTTATTATATTTAACAGCAAGTCGACCTGACATAGCTTATGTTGTGGGAATATGTGCTCGTTTTCAAGCGGATCCCTGCATCTCTCACTTAGAAGTTGTTAAACGAATTCTTAAGTATGTTCATGGGACCAGTGACTTTGGAATGATGTATTTCTATGGTACCACCCCCACTCTTGTTGGATATTGTGATGCTGACTGGACAGGTTCAGCTGATGATCGTAAAAGTACGTCTGAAGGATGTTTCTTTTTAGGAAACAACTTAATTTCTTGGTTAAGTAAGAAGCAAAACTGTGTCTCTTTATCTACAGCTGAAGCGGAATATATAGCAACAGGTAGTGGTTGCACACAGTTGATTTGGATGAAAAATATGTTGCATGAATATCGCTTTGATCAAGACACTATGACGTTGTATTATGACAATATGAGCGCAATTGATATATCGAAGAATCCTATTCAACATAGTCGAACAAAGCACATTGACATAAGACATCACTTTATTCATGAACTTGTTGAAGATAAAGTAATTAAGCTTGATCATATTTCTTCCAACTTACAATCAGTCGATATTTTCACTAAACCTCTGGATGCGAACTCATTTGAATACTTACGTGCTGATTTAGGAGTGTGTCTTACTTAA

Coding sequence (CDS)

ATGTCTGTAATATCTTCTCTAAAGTTAAAACTAAGAGAAGTTCAGAATGAGAATGATCAGATTTTAAAATCCGTTAAAATGCTAAACTCAGGAACGAAGAATCTAGATTCAATACTTAAGTCTGGACATAATGGTTCTCATAGATATGGGTTGGGATTTGTGGCCTCTGCAAGTAGAGCCATGCACAACCTCGCATTGTCTGGAGAATTAAATCTGCTGAAAGATGTAAGATTGCCTTTACATCCGTTCAGACCGCAGATGATGCACTGTGTCACCGGACATGTTACCTTTGGTGATGGTACAAAAGGAAAAATTATAGCTAAAGGTAACATAGACAAAAATAACCTACCACGTCTAAACGATCTGGGGCATGTCAGTATGAAAGGCTTGGAAAAAGTCATTAAAAATGAAGCAATTTTGGAAATTCTTGATTTAGACGTAAATAGAAAATTCTTCTGTGGAGACTGTCAAATTAGCAAGCAGACAAGGTCTACTCATAAAAGTCTGAAAGAATGTTATACAAATAGAGTTTTGGAATTGTTACATATGGATCTCATGGGTCCAATGCAAACAGAAAGTCTAAGAGGAAAGAGGTATATGCTGGTTGTAGTTGATGATTACTCAAGATATACTTGGGTTTGCTTTCCCAAAGGAAAAACAGATACTGTTGAAATATGCAAAAATTTGTGTTTGAAGCTACAACGTGAAAAAGGGAAGAAGATAACGAGGATCCGAAGTGATCATGGTAAAGATTTTGATAATGAAGGCTTTAACAGTTTTTCAGAAAGAAAGAACAGGACGTTACAAGAAATGACACGTGTTATGATACATGCCAAAAATTTACCTCTATGTTTTTGGGCAGAAGCTGTAAATACTACCTGTCACATTCATAATAGGGTAACTATTAGAACTGGAATGACTGTTACTCTTTATGAACTTTGGAAAGAGAGAGAGCCAAATATTAAATACTTCCATGTGTTTGGAAGTACATGTTATATCTTAGCTGACAAGGAATACCGTCAGAAATGGGATGCAAGGTCAGAACAAGGAATCTTTCTCGGGTACTCTCAGAACAGTCGAGCCTATAAAGTCTTCAATAACAGATCTGAAAGTGTTATGGAAACAATCAATGTAGTTATAAATGATCTCGATTCAGCTATCAAACAGATGAATGATGAGGAAGATGAGACTCCAAACATGTCTGAAGCTAGCACTACGAGTACTGTAGAAGTTTCTAAAGCTGATAACCCATCTGATGATCCAGGCAAAAGTTTGAAAAACTCTATTATTGGTGGTTCGTCAGCTGGGATGCAAACCAAAAGGAAAGAAAAGATTGATTATATGAAGATGGTTGTTGATTTATGTTATAATTCCACCATTGAACCTTCTACTGTTCACTCTGCTCTCAAGGATGAGTATTGGCTAAATGCTATGCAAGAGGAGCTACTCCAATTCAGACGAAACAATACTGATGAAGCTGGATGTGTGACGAAAAATAAAGCCAGATTAGTAGCTCAAGGGTATAATCAAGTTGAAGGTATTGAATTTGATGAAACGTTTGCTCCTGTTGCTCGACTTGAAGCCATTCAATTATTACTTGGTATATCATGCATACAGAAATTTAAATTGTATCAGATAGATGTAAAGAGTGTCTTCTTAAATGATTATTTGAATGAGGAGGTTTATGTTGCTCAACCAAAAGGTTTTGTTGATTCTGAGCATCCGAAGCATGTGTATAAGCTCAACAAATCTTTATATGGGCTAAAGCAAGCTCCGAGAGCTTGGTATGAACGGCTAACTGTTTACTTGAAAGGTAAAGAATATTCCAGAGGAGAAATTGTCAAGACCTTGTTTATACACAGGAAATCTGATCAACTTTTGGTTGCTCAAATTTATGTTGATGTCATCATTTTTGGAGGTTTTCCTCAAGATCTAGTAAATAATTTCATTAACATCATGCAGTCAGAATTCGAAATGAGCATGGTTGGAGAACTTTCATACTTTTTGGGTCTTCAAATTAAGCAAAAGAATGATGGCATCTTCATATCTCAGGAAAAGTATGCCAAGGATATGGTTAAAAAGTTTGGTTTGGAACAGGCTCGAAATAAGCGGACTCCAGCTGCGGCACATGTTAAACTTACAAGAGACACTGATGGTGCTGAAGTTGGTCACAAACTCTACAGGAGTATAGTAGGCAGCTTATTATATTTAACAGCAAGTCGACCTGACATAGCTTATGTTGTGGGAATATGTGCTCGTTTTCAAGCGGATCCCTGCATCTCTCACTTAGAAGTTGTTAAACGAATTCTTAAGTATGTTCATGGGACCAGTGACTTTGGAATGATGTATTTCTATGGTACCACCCCCACTCTTGTTGGATATTGTGATGCTGACTGGACAGGTTCAGCTGATGATCGTAAAAGTACGTCTGAAGGATGTTTCTTTTTAGGAAACAACTTAATTTCTTGGTTAAGTAAGAAGCAAAACTGTGTCTCTTTATCTACAGCTGAAGCGGAATATATAGCAACAGGTAGTGGTTGCACACAGTTGATTTGGATGAAAAATATGTTGCATGAATATCGCTTTGATCAAGACACTATGACGTTGTATTATGACAATATGAGCGCAATTGATATATCGAAGAATCCTATTCAACATAGTCGAACAAAGCACATTGACATAAGACATCACTTTATTCATGAACTTGTTGAAGATAAAGTAATTAAGCTTGATCATATTTCTTCCAACTTACAATCAGTCGATATTTTCACTAAACCTCTGGATGCGAACTCATTTGAATACTTACGTGCTGATTTAGGAGTGTGTCTTACTTAA

Protein sequence

MSVISSLKLKLREVQNENDQILKSVKMLNSGTKNLDSILKSGHNGSHRYGLGFVASASRAMHNLALSGELNLLKDVRLPLHPFRPQMMHCVTGHVTFGDGTKGKIIAKGNIDKNNLPRLNDLGHVSMKGLEKVIKNEAILEILDLDVNRKFFCGDCQISKQTRSTHKSLKECYTNRVLELLHMDLMGPMQTESLRGKRYMLVVVDDYSRYTWVCFPKGKTDTVEICKNLCLKLQREKGKKITRIRSDHGKDFDNEGFNSFSERKNRTLQEMTRVMIHAKNLPLCFWAEAVNTTCHIHNRVTIRTGMTVTLYELWKEREPNIKYFHVFGSTCYILADKEYRQKWDARSEQGIFLGYSQNSRAYKVFNNRSESVMETINVVINDLDSAIKQMNDEEDETPNMSEASTTSTVEVSKADNPSDDPGKSLKNSIIGGSSAGMQTKRKEKIDYMKMVVDLCYNSTIEPSTVHSALKDEYWLNAMQEELLQFRRNNTDEAGCVTKNKARLVAQGYNQVEGIEFDETFAPVARLEAIQLLLGISCIQKFKLYQIDVKSVFLNDYLNEEVYVAQPKGFVDSEHPKHVYKLNKSLYGLKQAPRAWYERLTVYLKGKEYSRGEIVKTLFIHRKSDQLLVAQIYVDVIIFGGFPQDLVNNFINIMQSEFEMSMVGELSYFLGLQIKQKNDGIFISQEKYAKDMVKKFGLEQARNKRTPAAAHVKLTRDTDGAEVGHKLYRSIVGSLLYLTASRPDIAYVVGICARFQADPCISHLEVVKRILKYVHGTSDFGMMYFYGTTPTLVGYCDADWTGSADDRKSTSEGCFFLGNNLISWLSKKQNCVSLSTAEAEYIATGSGCTQLIWMKNMLHEYRFDQDTMTLYYDNMSAIDISKNPIQHSRTKHIDIRHHFIHELVEDKVIKLDHISSNLQSVDIFTKPLDANSFEYLRADLGVCLT

Homology

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BLAST of Pay0020653 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 3.4e-119
Identity = 281/904 (31.08%), Postives = 453/904 (50.11%), Query Frame = 0


Query: 122  LGHVSMKGLEKVIKNEAILEILDLDVNRKFFCGDCQISKQTRSTHKSLKECYTNRVLELL 181
            +GH+S KGL+ + K   I       V     C  C   KQ R + ++  E   N +L+L+
Sbjct: 429  MGHMSEKGLQILAKKSLISYAKGTTVKP---CDYCLFGKQHRVSFQTSSERKLN-ILDLV 488

Query: 182  HMDLMGPMQTESLRGKRYMLVVVDDYSRYTWVCFPKGKTDTVEICKNLCLKLQREKGKKI 241
            + D+ GPM+ ES+ G +Y +  +DD SR  WV   K K    ++ +     ++RE G+K+
Sbjct: 489  YSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRKL 548

Query: 242  TRIRSDHGKDFDNEGF---------------------NSFSERKNRTLQEMTRVMIHAKN 301
             R+RSD+G ++ +  F                     N  +ER NRT+ E  R M+    
Sbjct: 549  KRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAK 608

Query: 302  LPLCFWAEAVNTTCHIHNRVTIRTGMTVTLYELWKEREPNIKYFHVFGSTCYILADKEYR 361
            LP  FW EAV T C++ NR             +W  +E +  +  VFG   +    KE R
Sbjct: 609  LPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQR 668

Query: 362  QKWDARSEQGIFLGYSQNSRAYKVFNNRSESVMETINVVINDLDSAIKQMNDEEDET--- 421
             K D +S   IF+GY      Y++++   + V+ + +VV    +S ++   D  ++    
Sbjct: 669  TKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFR--ESEVRTAADMSEKVKNG 728

Query: 422  --------PNMSEASTTSTVEVSKADNPSDDPGKSLKNS---IIGGSSAGMQTKRKEKID 481
                    P+ S   T++     +     + PG+ ++       G       T+ +E+  
Sbjct: 729  IIPNFVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQHQ 788

Query: 482  YMKMVVDLCYNSTIEPSTVHSALKDE----------------YWLNAMQEELLQFRRNNT 541
             ++        S   PST +  + D+                  + AMQEE+   ++N T
Sbjct: 789  PLRRSERPRVESRRYPSTEYVLISDDREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGT 848

Query: 542  ----------------------DEAGC-VTKNKARLVAQGYNQVEGIEFDETFAPVARLE 601
                                   +  C + + KARLV +G+ Q +GI+FDE F+PV ++ 
Sbjct: 849  YKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMT 908

Query: 602  AIQLLLGISCIQKFKLYQIDVKSVFLNDYLNEEVYVAQPKGFVDSEHPKHVYKLNKSLYG 661
            +I+ +L ++     ++ Q+DVK+ FL+  L EE+Y+ QP+GF  +     V KLNKSLYG
Sbjct: 909  SIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYG 968

Query: 662  LKQAPRAWYERLTVYLKGKEYSRGEIVKTLFIHRKSD-QLLVAQIYVDVIIFGGFPQDLV 721
            LKQAPR WY +   ++K + Y +      ++  R S+   ++  +YVD ++  G  + L+
Sbjct: 969  LKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLI 1028

Query: 722  NNFINIMQSEFEMSMVGELSYFLGLQIKQKNDG--IFISQEKYAKDMVKKFGLEQARNKR 781
                  +   F+M  +G     LG++I ++     +++SQEKY + ++++F ++ A+   
Sbjct: 1029 AKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVS 1088

Query: 782  TPAAAHVKLTRDTDGAEVGHK------LYRSIVGSLLY-LTASRPDIAYVVGICARFQAD 841
            TP A H+KL++      V  K       Y S VGSL+Y +  +RPDIA+ VG+ +RF  +
Sbjct: 1089 TPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLEN 1148

Query: 842  PCISHLEVVKRILKYVHGTSDFGMMYFYGTTPTLVGYCDADWTGSADDRKSTSEGCFFLG 901
            P   H E VK IL+Y+ GT+    + F G+ P L GY DAD  G  D+RKS++   F   
Sbjct: 1149 PGKEHWEAVKWILRYLRGTTG-DCLCFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTFS 1208

Query: 902  NNLISWLSKKQNCVSLSTAEAEYIATGSGCTQLIWMKNMLHEYRFDQDTMTLYYDNMSAI 942
               ISW SK Q CV+LST EAEYIA      ++IW+K  L E    Q    +Y D+ SAI
Sbjct: 1209 GGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQKEYVVYCDSQSAI 1268

[Close]

BLAST of Pay0020653 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 345.9 bits (886), Expect = 1.4e-93
Identity = 273/1001 (27.27%), Postives = 458/1001 (45.75%), Query Frame = 0


Query: 113  KNNLPRLND-LGHVSMKGL-----EKVIKNEAILEILDLDVNRKFFCGDCQISKQTRSTH 172
            KNN    ++  GH+S   L     + +  ++++L  L+L       C  C   KQ R   
Sbjct: 412  KNNFRLWHERFGHISDGKLLEIKRKNMFSDQSLLNNLELSCE---ICEPCLNGKQARLPF 471

Query: 173  KSLKE-CYTNRVLELLHMDLMGPMQTESLRGKRYMLVVVDDYSRYTWVCFPKGKTDTVEI 232
            K LK+  +  R L ++H D+ GP+   +L  K Y ++ VD ++ Y      K K+D   +
Sbjct: 472  KQLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSM 531

Query: 233  CKNLCLKLQREKGKKITRIRSDHGKDF-DNE--------------------GFNSFSERK 292
             ++   K +     K+  +  D+G+++  NE                      N  SER 
Sbjct: 532  FQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERM 591

Query: 293  NRTLQEMTRVMIHAKNLPLCFWAEAVNTTCHIHNRVTIR--TGMTVTLYELWKEREPNIK 352
             RT+ E  R M+    L   FW EAV T  ++ NR+  R     + T YE+W  ++P +K
Sbjct: 592  IRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYLK 651

Query: 353  YFHVFGSTCYILADKEYRQKWDARSEQGIFLGYSQNSRAYKVFNNRSESVMETINVVIND 412
            +  VFG+T Y+   K  + K+D +S + IF+GY  N   +K+++  +E  +   +VV+++
Sbjct: 652  HLRVFGATVYVHI-KNKQGKFDDKSFKSIFVGYEPN--GFKLWDAVNEKFIVARDVVVDE 711

Query: 413  LDSA-----------IKQMNDEED-------------ETPNMS-EASTTSTVEVSKADNP 472
             +             +K   + E+             E PN S E      ++ SK    
Sbjct: 712  TNMVNSRAVKFETVFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESEN 771

Query: 473  SDDPGKS--------------------LKNSIIGGSSAGMQTKRKEKIDY---------- 532
             + P  S                    LK+S         ++K++++ D+          
Sbjct: 772  KNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESNKYFLNESKKRKRDDHLNESKGSGNP 831

Query: 533  -----------------------------------MKMVVDLCYNS--------TIEPST 592
                                               +K    + YN          +   T
Sbjct: 832  NESRESETAEHLKEIGIDNPTKNDGIEIINRRSERLKTKPQISYNEEDNSLNKVVLNAHT 891

Query: 593  VHSALKDEY-----------WLNAMQEELLQFRRNNT----------------------- 652
            + + + + +           W  A+  EL   + NNT                       
Sbjct: 892  IFNDVPNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKY 951

Query: 653  DEAGCVTKNKARLVAQGYNQVEGIEFDETFAPVARLEAIQLLLGISCIQKFKLYQIDVKS 712
            +E G   + KARLVA+G+ Q   I+++ETFAPVAR+ + + +L +      K++Q+DVK+
Sbjct: 952  NELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKT 1011

Query: 713  VFLNDYLNEEVYVAQPKGFVDSEHPKHVYKLNKSLYGLKQAPRAWYERLTVYLKGKEYSR 772
             FLN  L EE+Y+  P+G   S +  +V KLNK++YGLKQA R W+E     LK  E+  
Sbjct: 1012 AFLNGTLKEEIYMRLPQGI--SCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVN 1071

Query: 773  GEIVKTLFIHRKS--DQLLVAQIYVDVIIFGGFPQDLVNNFINIMQSEFEMSMVGELSYF 832
              + + ++I  K   ++ +   +YVD ++        +NNF   +  +F M+ + E+ +F
Sbjct: 1072 SSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHF 1131

Query: 833  LGLQIKQKNDGIFISQEKYAKDMVKKFGLEQARNKRTPAAAHVK---LTRDTDGAEVGHK 892
            +G++I+ + D I++SQ  Y K ++ KF +E      TP  + +    L  D D     + 
Sbjct: 1132 IGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNSDED----CNT 1191

Query: 893  LYRSIVGSLLY-LTASRPDIAYVVGICARFQADPCISHLEVVKRILKYVHGTSDFGMMYF 942
              RS++G L+Y +  +RPD+   V I +R+ +       + +KR+L+Y+ GT D  +++ 
Sbjct: 1192 PCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFK 1251

[Close]

BLAST of Pay0020653 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 7.4e-90
Identity = 269/1006 (26.74%), Postives = 438/1006 (43.54%), Query Frame = 0


Query: 122  LGHVSMKGLEKVIKNEAILEILDLDVNRKFFCGDCQISKQTRSTHK---SLKECYTNRVL 181
            LGH S+  L  VI N + L +L+   ++   C DC I+K    +HK   S     +++ L
Sbjct: 450  LGHPSLAILNSVISNHS-LPVLN-PSHKLLSCSDCFINK----SHKVPFSNSTITSSKPL 509

Query: 182  ELLHMDLMGPMQTESLRGKRYMLVVVDDYSRYTWVCFPKGKT---DTVEICKNLCLKLQR 241
            E ++ D+       S+   RY ++ VD ++RYTW+   K K+   DT  I K+L   ++ 
Sbjct: 510  EYIYSDVWS-SPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSL---VEN 569

Query: 242  EKGKKITRIRSDHGKDF-------------------DNEGFNSFSERKNRTLQEMTRVMI 301
                +I  + SD+G +F                        N  SERK+R + EM   ++
Sbjct: 570  RFQTRIGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLL 629

Query: 302  HAKNLPLCFWAEAVNTTCHIHNRVTIRTGMTVTLYELWKEREPNIKYFHVFGSTCYILAD 361
               ++P  +W  A +   ++ NR+        + ++    + PN +   VFG  CY    
Sbjct: 630  SHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLR 689

Query: 362  KEYRQKWDARSEQGIFLGYSQNSRAYKVFNNRSESVMETINVVIND-----------LDS 421
               R K + +S+Q  F+GYS    AY   +  +  +  + +V  ++           + +
Sbjct: 690  PYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVST 749

Query: 422  AIKQMNDEEDETPNMSEASTT---------------------------STVEVSKADNPS 481
            + +Q +D     P+ +   TT                            T +VS ++ PS
Sbjct: 750  SQEQRSDSAPNWPSHTTLPTTPLVLPAPPCLGPHLDTSPRPPSSPSPLCTTQVSSSNLPS 809

Query: 482  DD---------------------------------------------------------- 541
                                                                        
Sbjct: 810  SSISSPSSSEPTAPSHNGPQPTAQPHQTQNSNSNSPILNNPNPNSPSPNSPNQNSPLPQS 869

Query: 542  ---------PGKSLKNSIIGGSSA---------------------------GMQTKRKEK 601
                     P  S+       SS+                            M T+ K+ 
Sbjct: 870  PISSPHIPTPSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMATRAKDG 929

Query: 602  I----DYMKMVVDLCYNSTIEPSTVHSALKDEYWLNAMQEELLQFRRNNT---------- 661
            I            L  NS  EP T   A+KD+ W  AM  E+     N+T          
Sbjct: 930  IRKPNQKYSYATSLAANS--EPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPS 989

Query: 662  --------------DEAGCVTKNKARLVAQGYNQVEGIEFDETFAPVARLEAIQLLLGIS 721
                          +  G + + KARLVA+GYNQ  G+++ ETF+PV +  +I+++LG++
Sbjct: 990  VTIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVA 1049

Query: 722  CIQKFKLYQIDVKSVFLNDYLNEEVYVAQPKGFVDSEHPKHVYKLNKSLYGLKQAPRAWY 781
              + + + Q+DV + FL   L +EVY++QP GFVD + P +V +L K++YGLKQAPRAWY
Sbjct: 1050 VDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWY 1109

Query: 782  ERLTVYLKGKEYSRGEIVKTLFIHRKSDQLLVAQIYVDVIIFGGFPQDLVNNFINIMQSE 841
              L  YL    +       +LF+ ++   ++   +YVD I+  G    L+ + ++ +   
Sbjct: 1110 VELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQR 1169

Query: 842  FEMSMVGELSYFLGLQIKQKNDGIFISQEKYAKDMVKKFGLEQARNKRTPAAAHVKLTRD 901
            F +    +L YFLG++ K+   G+ +SQ +Y  D++ +  +  A+   TP A   KLT  
Sbjct: 1170 FSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLH 1229

Query: 902  TDGAEVGHKLYRSIVGSLLYLTASRPDIAYVVGICARFQADPCISHLEVVKRILKYVHGT 942
            +         YR IVGSL YL  +RPD++Y V   +++   P   H   +KR+L+Y+ GT
Sbjct: 1230 SGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGT 1289

[Close]

BLAST of Pay0020653 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 2.7e-84
Identity = 205/604 (33.94%), Postives = 317/604 (52.48%), Query Frame = 0


Query: 381  NDLDSAIKQMNDEEDETPNMSEASTTSTVEVSKADNPSD---DPGKSLKNSIIGGSSAGM 440
            N+  S + Q      ++ + S + TTS    S +  P      P   L   +   + A +
Sbjct: 865  NESPSQLAQSLSTPAQSSSSSPSPTTSASSSSTSPTPPSILIHPPPPLAQIVNNNNQAPL 924

Query: 441  QTK---RKEKIDYMK------MVVDLCYNSTIEPSTVHSALKDEYWLNAMQEELLQFRRN 500
             T     + K   +K      + V L   S  EP T   ALKDE W NAM  E+     N
Sbjct: 925  NTHSMGTRAKAGIIKPNPKYSLAVSLAAES--EPRTAIQALKDERWRNAMGSEINAQIGN 984

Query: 501  NT------------------------DEAGCVTKNKARLVAQGYNQVEGIEFDETFAPVA 560
            +T                        +  G + + KARLVA+GYNQ  G+++ ETF+PV 
Sbjct: 985  HTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVI 1044

Query: 561  RLEAIQLLLGISCIQKFKLYQIDVKSVFLNDYLNEEVYVAQPKGFVDSEHPKHVYKLNKS 620
            +  +I+++LG++  + + + Q+DV + FL   L ++VY++QP GF+D + P +V KL K+
Sbjct: 1045 KSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKA 1104

Query: 621  LYGLKQAPRAWYERLTVYLKGKEYSRGEIVKTLFIHRKSDQLLVAQIYVDVIIFGGFPQD 680
            LYGLKQAPRAWY  L  YL    +       +LF+ ++   ++   +YVD I+  G    
Sbjct: 1105 LYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPT 1164

Query: 681  LVNNFINIMQSEFEMSMVGELSYFLGLQIKQKNDGIFISQEKYAKDMVKKFGLEQARNKR 740
            L++N ++ +   F +    EL YFLG++ K+   G+ +SQ +Y  D++ +  +  A+   
Sbjct: 1165 LLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTGLHLSQRRYILDLLARTNMITAKPVT 1224

Query: 741  TPAAAHVKL-----TRDTDGAEVGHKLYRSIVGSLLYLTASRPDIAYVVGICARFQADPC 800
            TP A   KL     T+ TD  E     YR IVGSL YL  +RPDI+Y V   ++F   P 
Sbjct: 1225 TPMAPSPKLSLYSGTKLTDPTE-----YRGIVGSLQYLAFTRPDISYAVNRLSQFMHMPT 1284

Query: 801  ISHLEVVKRILKYVHGTSDFGMMYFYGTTPTLVGYCDADWTGSADDRKSTSEGCFFLGNN 860
              HL+ +KRIL+Y+ GT + G+    G T +L  Y DADW G  DD  ST+    +LG++
Sbjct: 1285 EEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHH 1344

Query: 861  LISWLSKKQNCVSLSTAEAEYIATGSGCTQLIWMKNMLHE--YRFDQDTMTLYYDNMSAI 920
             ISW SKKQ  V  S+ EAEY +  +  +++ W+ ++L E   R  +  + +Y DN+ A 
Sbjct: 1345 PISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPV-IYCDNVGAT 1404

Query: 921  DISKNPIQHSRTKHIDIRHHFIHELVEDKVIKLDHISSNLQSVDIFTKPLDANSFEYLRA 942
             +  NP+ HSR KHI I +HFI   V+   +++ H+S++ Q  D  TKPL   +F+   +
Sbjct: 1405 YLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRTAFQNFAS 1460

[Close]

BLAST of Pay0020653 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 1.1e-35
Identity = 84/223 (37.67%), Postives = 125/223 (56.05%), Query Frame = 0


Query: 631 IYVDVIIFGGFPQDLVNNFINIMQSEFEMSMVGELSYFLGLQIKQKNDGIFISQEKYAKD 690
           +YVD I+  G    L+N  I  + S F M  +G + YFLG+QIK    G+F+SQ KYA+ 
Sbjct: 5   LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64

Query: 691 MVKKFGLEQARNKRTPAAAHVKLTRDTDGAEVGHKL-YRSIVGSLLYLTASRPDIAYVVG 750
           ++   G+   +   TP    +KL      A+      +RSIVG+L YLT +RPDI+Y V 
Sbjct: 65  ILNNAGMLDCKPMSTPLP--LKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVN 124

Query: 751 ICARFQADPCISHLEVVKRILKYVHGTSDFGMMYFYGTTPTLVGYCDADWTGSADDRKST 810
           I  +   +P ++  +++KR+L+YV GT   G+     +   +  +CD+DW G    R+ST
Sbjct: 125 IVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRST 184

Query: 811 SEGCFFLGNNLISWLSKKQNCVSLSTAEAEYIATGSGCTQLIW 853
           +  C FLG N+ISW +K+Q  VS S+ E EY A      +L W
Sbjct: 185 TGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Pay0020653 vs. ExPASy TrEMBL
Match: Q84VH6 (Gag-pol polyprotein OS=Glycine max OX=3847 GN=gag-pol PE=4 SV=1)

HSP 1 Score: 1015.4 bits (2624), Expect = 1.6e-292
Identity = 512/880 (58.18%), Postives = 639/880 (72.61%), Query Frame = 0


Query: 123  GHVSMKGLEKVIKNEAILEILDLDVNRKFFCGDCQISKQTRSTHKSLKECYTNRVLELLH 182
            GH+ ++G++K+I   A+  I +L +     CG+CQI KQ + +H+ L+   T+RVLELLH
Sbjct: 698  GHLHLRGMKKIIDKGAVRGIPNLKIEEGRICGECQIGKQVKMSHQKLQHQTTSRVLELLH 757

Query: 183  MDLMGPMQTESLRGKRYMLVVVDDYSRYTWVCFPKGKTDTVEICKNLCLKLQREKGKKIT 242
            MDLMGPMQ ESL GKRY  VVVDD+SR+TWV F + K+DT E+ K L L+LQREK   I 
Sbjct: 758  MDLMGPMQVESLGGKRYAYVVVDDFSRFTWVNFIREKSDTFEVFKELSLRLQREKDCVIK 817

Query: 243  RIRSDHGKDFDNEGFNSFS---------------------ERKNRTLQEMTRVMIHAKNL 302
            RIRSDHG++F+N  F  F                      ERKNRTLQE  RVM+HAK L
Sbjct: 818  RIRSDHGREFENSKFTEFCTSEGITHEFSAAITPQQNGIVERKNRTLQEAARVMLHAKEL 877

Query: 303  PLCFWAEAVNTTCHIHNRVTIRTGMTVTLYELWKEREPNIKYFHVFGSTCYILADKEYRQ 362
            P   WAEA+NT C+IHNRVT+R G   TLYE+WK R+P +K+FH+FGS CYILAD+E R+
Sbjct: 878  PYNLWAEAMNTACYIHNRVTLRRGTPTTLYEIWKGRKPTVKHFHIFGSPCYILADREQRR 937

Query: 363  KWDARSEQGIFLGYSQNSRAYKVFNNRSESVMETINVVINDLDSAIKQMNDEEDETPNMS 422
            K D +S+ GIFLGYS NSRAY+VFN+R+ +VME+INVV++DL  A K+  +E+  T   +
Sbjct: 938  KMDPKSDAGIFLGYSTNSRAYRVFNSRTRTVMESINVVVDDLTPARKKDVEEDVRTSGDN 997

Query: 423  EASTTSTVE-VSKADNPSDDPGKSL--------------KNSIIGGSSAGMQTKRKEKID 482
             A T  + E    +D+ +D+P  +               K  IIG  + G+ T+ +E   
Sbjct: 998  VADTAKSAENAENSDSATDEPNINQPDKRPSIRIQKMHPKELIIGDPNRGVTTRSRE--- 1057

Query: 483  YMKMVVDLCYNSTIEPSTVHSALKDEYWLNAMQEELLQFRR------------------- 542
             +++V + C+ S IEP  V  AL DE+W+NAMQEEL QF+R                   
Sbjct: 1058 -IEIVSNSCFVSKIEPKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTK 1117

Query: 543  ----NNTDEAGCVTKNKARLVAQGYNQVEGIEFDETFAPVARLEAIQLLLGISCIQKFKL 602
                N T+E G +T+NKARLVAQGY Q+EG++FDETFAPVARLE+I+LLLG++CI KFKL
Sbjct: 1118 WIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAPVARLESIRLLLGVACILKFKL 1177

Query: 603  YQIDVKSVFLNDYLNEEVYVAQPKGFVDSEHPKHVYKLNKSLYGLKQAPRAWYERLTVYL 662
            YQ+DVKS FLN YLNEE YV QPKGFVD  HP HVY+L K+LYGLKQAPRAWYERLT +L
Sbjct: 1178 YQMDVKSAFLNGYLNEEAYVEQPKGFVDPTHPDHVYRLKKALYGLKQAPRAWYERLTEFL 1237

Query: 663  KGKEYSRGEIVKTLFIHRKSDQLLVAQIYVDVIIFGGFPQDLVNNFINIMQSEFEMSMVG 722
              + Y +G I KTLF+ + ++ L++AQIYVD I+FGG   +++ +F+  MQSEFEMS+VG
Sbjct: 1238 TQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMSLVG 1297

Query: 723  ELSYFLGLQIKQKNDGIFISQEKYAKDMVKKFGLEQARNKRTPAAAHVKLTRDTDGAEVG 782
            EL+YFLGLQ+KQ  D IF+SQ KYAK++VKKFG+E A +KRTPA  H+KL++D  G  V 
Sbjct: 1298 ELTYFLGLQVKQMEDSIFLSQSKYAKNIVKKFGMENASHKRTPAPTHLKLSKDEAGTSVD 1357

Query: 783  HKLYRSIVGSLLYLTASRPDIAYVVGICARFQADPCISHLEVVKRILKYVHGTSDFGMMY 842
              LYRS++GSLLYLTASRPDI Y VG+CAR+QA+P ISHL  VKRILKYV+GTSD+G+MY
Sbjct: 1358 QSLYRSMIGSLLYLTASRPDITYAVGVCARYQANPKISHLNQVKRILKYVNGTSDYGIMY 1417

Query: 843  FYGTTPTLVGYCDADWTGSADDRKSTSEGCFFLGNNLISWLSKKQNCVSLSTAEAEYIAT 902
             + +   LVGYCDADW GSADDRKSTS GCF+LGNNLISW SKKQNCVSLSTAEAEYIA 
Sbjct: 1418 CHCSGSMLVGYCDADWAGSADDRKSTSGGCFYLGNNLISWFSKKQNCVSLSTAEAEYIAA 1477

Query: 903  GSGCTQLIWMKNMLHEYRFDQDTMTLYYDNMSAIDISKNPIQHSRTKHIDIRHHFIHELV 944
            GS C+QL+WMK ML EY  +QD MTLY DNMSAI+ISKNP+QHSRTKHIDIRHH+I ELV
Sbjct: 1478 GSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAINISKNPVQHSRTKHIDIRHHYIRELV 1537

[Close]

BLAST of Pay0020653 vs. ExPASy TrEMBL
Match: Q84VI4 (Gag-pol polyprotein OS=Glycine max OX=3847 GN=gag-pol PE=4 SV=1)

HSP 1 Score: 1012.3 bits (2616), Expect = 1.3e-291
Identity = 561/1166 (48.11%), Postives = 714/1166 (61.23%), Query Frame = 0


Query: 4    ISSLKLKLREVQNENDQILKSVKMLNSGTKNLDSILKSGHNGSHRYGLGF---------- 63
            IS LK ++  + ++ + + KS+KMLN G+  LD +L  G N  ++ GLGF          
Sbjct: 409  ISELKGEVGFLNSKLENMTKSIKMLNKGSDTLDEVLLLGKNAGNQRGLGFNPKSAGRTTM 468

Query: 64   ------------VASASRAMHN-------------LALSGELNLLKDVRLPLHPF----- 123
                          S  R+ H+                 G+   +K     LHP      
Sbjct: 469  TEFVPAKNRTGATMSQHRSRHHGMQQKKSKRKKWRCHYCGKYGHIKPFCYHLHPHHGTQS 528

Query: 124  ---RPQMM---------------------------------------------HCVTGHV 183
               R +MM                                              C T +V
Sbjct: 529  SNSRKKMMWVPKHKAVSLVVHTSLRASAKEDWYLDSGCSRHMTGVKEFLLNIEPCSTSYV 588

Query: 184  TFGDGTKGKIIAKGNIDKNNLPRLNDL--------------------------------- 243
            TFGDG+KGKII  G +  + LP LN +                                 
Sbjct: 589  TFGDGSKGKIIGMGKLVHDGLPSLNKVLLVKGLTANLISISQLCDEGFNVNFTKSECLVT 648

Query: 244  ----------------------------------------------GHVSMKGLEKVIKN 303
                                                          GH+ ++G++K+I  
Sbjct: 649  NEKSEVLMKGSRSKDNCYLWTPQETSYSSTCLSSKEDEVRIWHQRFGHLHLRGMKKIIDK 708

Query: 304  EAILEILDLDVNRKFFCGDCQISKQTRSTHKSLKECYTNRVLELLHMDLMGPMQTESLRG 363
             A+  I +L +     CG+CQI KQ + +H+ L+   T+RVLELLHMDLMGPMQ ESL G
Sbjct: 709  GAVRGIPNLKIEEGRICGECQIGKQVKMSHQKLQHQTTSRVLELLHMDLMGPMQVESLGG 768

Query: 364  KRYMLVVVDDYSRYTWVCFPKGKTDTVEICKNLCLKLQREKGKKITRIRSDHGKDFDN-- 423
            KRY  VVVDD+SR+TWV F + K++T E+ K L L+LQREK   I RIRSDHG++F+N  
Sbjct: 769  KRYAYVVVDDFSRFTWVKFIREKSETFEVFKELSLRLQREKDCVIKRIRSDHGREFENSR 828

Query: 424  -------EGF------------NSFSERKNRTLQEMTRVMIHAKNLPLCFWAEAVNTTCH 483
                   EG             N   ERKNRTLQE  RVM+HAK LP   WAEA+NT C+
Sbjct: 829  LTEFCTSEGITHEFSAAITPQQNGIVERKNRTLQEAARVMLHAKELPYNLWAEAMNTACY 888

Query: 484  IHNRVTIRTGMTVTLYELWKEREPNIKYFHVFGSTCYILADKEYRQKWDARSEQGIFLGY 543
            IHNRVT+R G   TLYE+WK R+P++K+FH+FGS CYILAD+E R+K D +S+ GIFLGY
Sbjct: 889  IHNRVTLRRGTPTTLYEIWKGRKPSVKHFHIFGSPCYILADREQRRKMDPKSDAGIFLGY 948

Query: 544  SQNSRAYKVFNNRSESVMETINVVINDLDSAIKQMNDEEDET--PNMSEA---------- 603
            S NSRAY+VFN+R+ +VME+INVV++DL  A K+  +E+  T   N+++A          
Sbjct: 949  STNSRAYRVFNSRTRTVMESINVVVDDLSPARKKDVEEDVRTSGDNVADAAKSGENAENS 1008

Query: 604  -STTSTVEVSKADNPSDDPGKSL--KNSIIGGSSAGMQTKRKEKIDYMKMVVDLCYNSTI 663
             S T    +++ D  S    + +  K  IIG  + G+ T+ +E    +++V + C+ S I
Sbjct: 1009 DSATDESNINQPDKRSSTRIQKMHPKELIIGDPNRGVTTRSRE----VEIVSNSCFVSKI 1068

Query: 664  EPSTVHSALKDEYWLNAMQEELLQFRR-----------------------NNTDEAGCVT 723
            EP  V  AL DE+W+NAMQEEL QF+R                       N T+E G +T
Sbjct: 1069 EPKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEGVIT 1128

Query: 724  KNKARLVAQGYNQVEGIEFDETFAPVARLEAIQLLLGISCIQKFKLYQIDVKSVFLNDYL 783
            +NKARLVAQGY Q+EG++FDETFAPVARLE+I+LLLG++CI KFKLYQ+DVKS FLN YL
Sbjct: 1129 RNKARLVAQGYTQIEGVDFDETFAPVARLESIRLLLGVACILKFKLYQMDVKSAFLNGYL 1188

Query: 784  NEEVYVAQPKGFVDSEHPKHVYKLNKSLYGLKQAPRAWYERLTVYLKGKEYSRGEIVKTL 843
            NEEVYV QPKGF D  HP HVY+L K+LYGLKQAPRAWYERLT +L  + Y +G I KTL
Sbjct: 1189 NEEVYVEQPKGFADPTHPDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTL 1248

Query: 844  FIHRKSDQLLVAQIYVDVIIFGGFPQDLVNNFINIMQSEFEMSMVGELSYFLGLQIKQKN 903
            F+ + ++ L++AQIYVD I+FGG   +++ +F+  MQSEFEMS+VGEL+YFLGLQ+KQ  
Sbjct: 1249 FVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQVKQME 1308

Query: 904  DGIFISQEKYAKDMVKKFGLEQARNKRTPAAAHVKLTRDTDGAEVGHKLYRSIVGSLLYL 944
            D IF+SQ +YAK++VKKFG+E A +KRTPA  H+KL++D  G  V   LYRS++GSLLYL
Sbjct: 1309 DSIFLSQSRYAKNIVKKFGMENASHKRTPAPTHLKLSKDEAGTSVDQSLYRSMIGSLLYL 1368

[Close]

BLAST of Pay0020653 vs. ExPASy TrEMBL
Match: Q84VH8 (Gag-pol polyprotein OS=Glycine max OX=3847 GN=gag-pol PE=4 SV=1)

HSP 1 Score: 1012.3 bits (2616), Expect = 1.3e-291
Identity = 511/880 (58.07%), Postives = 642/880 (72.95%), Query Frame = 0


Query: 123  GHVSMKGLEKVIKNEAILEILDLDVNRKFFCGDCQISKQTRSTHKSLKECYTNRVLELLH 182
            GH+ ++G++K+I   A+  I +L +     CG+CQI KQ + +H+ L+   T+RVLELLH
Sbjct: 697  GHLHLRGMKKIIDKGAVRGIPNLKIEEGRICGECQIGKQVKMSHQKLRHQTTSRVLELLH 756

Query: 183  MDLMGPMQTESLRGKRYMLVVVDDYSRYTWVCFPKGKTDTVEICKNLCLKLQREKGKKIT 242
            MDLMGPMQ ESL GKRY  VVVDD+SR+TWV F + K++T E+ K L L+LQREK   I 
Sbjct: 757  MDLMGPMQVESLGGKRYAYVVVDDFSRFTWVNFIREKSETFEVFKELSLRLQREKDCVIK 816

Query: 243  RIRSDHGKDFDNEGFNSFS---------------------ERKNRTLQEMTRVMIHAKNL 302
            RIRSDHG++F+N  F  F                      ERKNRTLQE  RVM+HAK L
Sbjct: 817  RIRSDHGREFENSRFTEFCTSEGITHEFSAAITPQQNGIVERKNRTLQEAARVMLHAKEL 876

Query: 303  PLCFWAEAVNTTCHIHNRVTIRTGMTVTLYELWKEREPNIKYFHVFGSTCYILADKEYRQ 362
            P   WAEA+NT C+IHNRVT+R G   TLYE+WK R+P++K+FH+FGS CYILAD+E R+
Sbjct: 877  PYNLWAEAMNTACYIHNRVTLRRGTPTTLYEIWKGRKPSVKHFHIFGSPCYILADREQRR 936

Query: 363  KWDARSEQGIFLGYSQNSRAYKVFNNRSESVMETINVVINDLDSAIKQMNDEEDET--PN 422
            K D +S+ GIFLGYS NSRAY+VFN+R+ +VME+INVV++DL  A K+  +E+  T   N
Sbjct: 937  KMDPKSDAGIFLGYSTNSRAYRVFNSRTRTVMESINVVVDDLSPARKKDVEEDVRTLGDN 996

Query: 423  MSEA-----------STTSTVEVSKADNPSDDPGKSL--KNSIIGGSSAGMQTKRKEKID 482
            +++A           S T    +++ D  S    + +  K  IIG  + G+ T+ +E   
Sbjct: 997  VADAAKSGENAENSDSATDESNINQPDKRSSTRIQKMHPKELIIGDPNRGVTTRSRE--- 1056

Query: 483  YMKMVVDLCYNSTIEPSTVHSALKDEYWLNAMQEELLQFRR------------------- 542
             +++V + C+ S IEP  V  AL DE+W+NAMQEEL QF+R                   
Sbjct: 1057 -VEIVSNSCFVSKIEPKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTK 1116

Query: 543  ----NNTDEAGCVTKNKARLVAQGYNQVEGIEFDETFAPVARLEAIQLLLGISCIQKFKL 602
                N T+E G +T+NKARLVAQGY Q+EG++FDETFAPVARLE+I+LLLG++CI KFKL
Sbjct: 1117 WIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAPVARLESIRLLLGVACILKFKL 1176

Query: 603  YQIDVKSVFLNDYLNEEVYVAQPKGFVDSEHPKHVYKLNKSLYGLKQAPRAWYERLTVYL 662
            YQ+DVKS FLN YLNEEVYV QPKGF D  HP HVY+L K+LYGLKQAPRAWYERLT +L
Sbjct: 1177 YQMDVKSAFLNGYLNEEVYVEQPKGFADPTHPDHVYRLKKALYGLKQAPRAWYERLTEFL 1236

Query: 663  KGKEYSRGEIVKTLFIHRKSDQLLVAQIYVDVIIFGGFPQDLVNNFINIMQSEFEMSMVG 722
              + Y +G I KTLF+ + ++ L++AQIYVD I+FGG   +++ +F+  MQSEFEMS+VG
Sbjct: 1237 TQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMSLVG 1296

Query: 723  ELSYFLGLQIKQKNDGIFISQEKYAKDMVKKFGLEQARNKRTPAAAHVKLTRDTDGAEVG 782
            EL+YFLGLQ+KQ  D IF+SQ +YAK++VKKFG+E A +KRTPA  H+KL++D  G  V 
Sbjct: 1297 ELTYFLGLQVKQMEDSIFLSQSRYAKNIVKKFGMENASHKRTPAPTHLKLSKDEAGTSVD 1356

Query: 783  HKLYRSIVGSLLYLTASRPDIAYVVGICARFQADPCISHLEVVKRILKYVHGTSDFGMMY 842
              LYRS++GSLLYLTASRPDI Y VG+CAR+QA+P ISHL  VKRILKYV+GTSD+G+MY
Sbjct: 1357 QSLYRSMIGSLLYLTASRPDITYAVGVCARYQANPKISHLTQVKRILKYVNGTSDYGIMY 1416

Query: 843  FYGTTPTLVGYCDADWTGSADDRKSTSEGCFFLGNNLISWLSKKQNCVSLSTAEAEYIAT 902
             + + P LVGYCDADW GSADDRKSTS GCF+LGNNLISW SKKQNCVSLSTAEAEYIA 
Sbjct: 1417 CHCSNPMLVGYCDADWAGSADDRKSTSGGCFYLGNNLISWFSKKQNCVSLSTAEAEYIAA 1476

Query: 903  GSGCTQLIWMKNMLHEYRFDQDTMTLYYDNMSAIDISKNPIQHSRTKHIDIRHHFIHELV 944
            GS C+QL+WMK ML EY  +QD MTLY DNMSAI+ISKNP+QHSRTKHIDIRHH+I +LV
Sbjct: 1477 GSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAINISKNPVQHSRTKHIDIRHHYIRDLV 1536

[Close]

BLAST of Pay0020653 vs. ExPASy TrEMBL
Match: A0A392LWM0 (Gag-pol polyprotein (Fragment) OS=Trifolium medium OX=97028 GN=A2U01_0000112 PE=4 SV=1)

HSP 1 Score: 1011.1 bits (2613), Expect = 2.9e-291
Identity = 513/877 (58.49%), Postives = 641/877 (73.09%), Query Frame = 0


Query: 122  LGHVSMKGLEKVIKNEAILEILDLDVNRKFFCGDCQISKQTRSTHKSLKECYTNRVLELL 181
            LGH+ +KG++K I  EAI  +  L +     CG+CQI KQT+ +H  L+   T+RVLELL
Sbjct: 427  LGHLHLKGMKKAIAEEAIRGLPKLKIEEGSICGECQIGKQTKMSHPKLQHLTTSRVLELL 486

Query: 182  HMDLMGPMQTESLRGKRYMLVVVDDYSRYTWVCFPKGKTDTVEICKNLCLKLQREKGKKI 241
            HMDLMGPMQ ES+ GKRY  V+VDD+SR+TW+ F K K+D+ E+ KNLCL+LQREK   I
Sbjct: 487  HMDLMGPMQVESIGGKRYAFVMVDDFSRFTWIDFLKEKSDSFEVFKNLCLQLQREKNTVI 546

Query: 242  TRIRSDHGKDFDNEGF---------------------NSFSERKNRTLQEMTRVMIHAKN 301
             RIRSDHGK+F+N  F                     N   ERKNRT+QE  RVM+HAK+
Sbjct: 547  VRIRSDHGKEFENAKFLEFCSSEGIKHEFSSPITPQQNGVVERKNRTIQESARVMLHAKH 606

Query: 302  LPLCFWAEAVNTTCHIHNRVTIRTGMTVTLYELWKEREPNIKYFHVFGSTCYILADKEYR 361
            LP   WAEA+NT C+IHNRVT+R+G + TLYELWK R+P +K+FHVFGS CYILAD+E R
Sbjct: 607  LPKNLWAEAMNTACYIHNRVTLRSGTSTTLYELWKGRKPTVKHFHVFGSKCYILADREPR 666

Query: 362  QKWDARSEQGIFLGYSQNSRAYKVFNNRSESVMETINVVINDLDSA--------IKQMND 421
            +K D +SE+GIFLGYS NSRAY+V N+R++ +ME+INVV++D  SA        +   +D
Sbjct: 667  RKLDPKSEEGIFLGYSTNSRAYRVMNSRTKVIMESINVVVDDTTSAKTYDVEPDVTTSDD 726

Query: 422  --EEDETPNMSEASTTSTVEVSKADNPSDDPGKS-LKNSIIGGSSAGMQTKRKEKIDYMK 481
              EE E  +  EAST+    V+K   PS    K+  K+ IIG  + G+ T+R       +
Sbjct: 727  PVEETEPESDDEASTSDLAPVNKV--PSIRIQKNHPKDLIIGSPTQGITTRRSN-----E 786

Query: 482  MVVDLCYNSTIEPSTVHSALKDEYWLNAMQEELLQFR----------------------- 541
             + + C+ S IEP  V  AL DE+W+ AMQEEL QF+                       
Sbjct: 787  NISNACFVSKIEPKNVKEALTDEFWIEAMQEELTQFKRSEVWDLVPRPCNVNVIGTKWVY 846

Query: 542  RNNTDEAGCVTKNKARLVAQGYNQVEGIEFDETFAPVARLEAIQLLLGISCIQKFKLYQI 601
            RN +DE G VT+NKARLVAQGY+QVEG++FDETFAPVARLE+I+LL+G++CI +FKLYQ+
Sbjct: 847  RNKSDENGVVTRNKARLVAQGYSQVEGLDFDETFAPVARLESIRLLIGVACILRFKLYQM 906

Query: 602  DVKSVFLNDYLNEEVYVAQPKGFVDSEHPKHVYKLNKSLYGLKQAPRAWYERLTVYLKGK 661
            DVKS FLN YL+EEVYV QPKGF+D  +P HVYKL K+LYGLKQAPRAWYERLT++L  +
Sbjct: 907  DVKSAFLNGYLHEEVYVEQPKGFIDPSYPDHVYKLKKALYGLKQAPRAWYERLTIFLVSQ 966

Query: 662  EYSRGEIVKTLFIHRKSDQLLVAQIYVDVIIFGGFPQDLVNNFINIMQSEFEMSMVGELS 721
             Y +G   KTLF+  K+  L++AQIYVD I+FGG   ++V +F+  MQSEFEMS+VGEL+
Sbjct: 967  GYRKGGNDKTLFVKEKNGNLMIAQIYVDDIVFGGMSNEMVQHFVQQMQSEFEMSLVGELT 1026

Query: 722  YFLGLQIKQKNDGIFISQEKYAKDMVKKFGLEQARNKRTPAAAHVKLTRDTDGAEVGHKL 781
            YFLGLQ+KQ  D IF+SQ KYAK++VKKFG+E A  KRTPAA H+KLTRD  G  V   +
Sbjct: 1027 YFLGLQVKQMEDTIFVSQSKYAKNIVKKFGMESAAYKRTPAATHLKLTRDEKGVNVDQSM 1086

Query: 782  YRSIVGSLLYLTASRPDIAYVVGICARFQADPCISHLEVVKRILKYVHGTSDFGMMYFYG 841
            Y+S++GSLLYLTASRPDI + VG+CAR+QA+P +SHL  VKRILKY++GTSD+G++Y   
Sbjct: 1087 YKSMIGSLLYLTASRPDITFAVGVCARYQAEPKMSHLIQVKRILKYINGTSDYGILYSQT 1146

Query: 842  TTPTLVGYCDADWTGSADDRKSTSEGCFFLGNNLISWLSKKQNCVSLSTAEAEYIATGSG 901
                LVGYCDADW GSADDRKSTS GCFFLGNNLISW SKKQNCVSLSTAEAEYIA GS 
Sbjct: 1147 KNSNLVGYCDADWAGSADDRKSTSGGCFFLGNNLISWFSKKQNCVSLSTAEAEYIAAGSS 1206

Query: 902  CTQLIWMKNMLHEYRFDQDTMTLYYDNMSAIDISKNPIQHSRTKHIDIRHHFIHELVEDK 944
            C+QL+WMK ML +Y   QD MTL+ DN+SAI+ISKNPIQHSRTKHIDIRHHFI +LVE+ 
Sbjct: 1207 CSQLLWMKQMLKDYNVPQDVMTLFCDNLSAINISKNPIQHSRTKHIDIRHHFIRDLVEEN 1266

[Close]

BLAST of Pay0020653 vs. ExPASy TrEMBL
Match: Q84VI2 (Gag-pol polyprotein OS=Glycine max OX=3847 GN=gag-pol PE=4 SV=1)

HSP 1 Score: 1006.5 bits (2601), Expect = 7.3e-290
Identity = 508/880 (57.73%), Postives = 641/880 (72.84%), Query Frame = 0


Query: 123  GHVSMKGLEKVIKNEAILEILDLDVNRKFFCGDCQISKQTRSTHKSLKECYTNRVLELLH 182
            GH+ ++G++K++   A+  I +L +     CG+CQI KQ + +H+ L+   T+RVLELLH
Sbjct: 697  GHLHLRGMKKILDKSAVRGIPNLKIEEGRICGECQIGKQVKMSHQKLQHQTTSRVLELLH 756

Query: 183  MDLMGPMQTESLRGKRYMLVVVDDYSRYTWVCFPKGKTDTVEICKNLCLKLQREKGKKIT 242
            MDLMGPMQ ESL GKRY  VVVDD+SR+TWV F + K+ T E+ K L L+LQREK   I 
Sbjct: 757  MDLMGPMQVESLGGKRYAYVVVDDFSRFTWVNFIREKSGTFEVFKKLSLRLQREKDCVIK 816

Query: 243  RIRSDHGKDFDNEGFNSFS---------------------ERKNRTLQEMTRVMIHAKNL 302
            RIRSDHG++F+N  F  F                      ERKNRTLQE  RVM+HAK L
Sbjct: 817  RIRSDHGREFENSRFTEFCTSEGITHEFSAAITPQQNGIVERKNRTLQEAARVMLHAKEL 876

Query: 303  PLCFWAEAVNTTCHIHNRVTIRTGMTVTLYELWKEREPNIKYFHVFGSTCYILADKEYRQ 362
            P   WAEA+NT C+IHNRVT+R G   TLYE+WK R+P++K+FH+FGS CYILAD+E R+
Sbjct: 877  PYNLWAEAMNTACYIHNRVTLRRGTPTTLYEIWKGRKPSVKHFHIFGSPCYILADREQRR 936

Query: 363  KWDARSEQGIFLGYSQNSRAYKVFNNRSESVMETINVVINDLDSAIKQMNDEEDET--PN 422
            K D +S+ GIFLGYS NSRAY+VFN+R+ +VME+INVV++DL  A K+  +E+  T   N
Sbjct: 937  KMDPKSDAGIFLGYSTNSRAYRVFNSRTRTVMESINVVVDDLSPARKKDVEEDVRTSGDN 996

Query: 423  MSEA-----------STTSTVEVSKADNPSDDPGKSL--KNSIIGGSSAGMQTKRKEKID 482
            +++A           S T    +++ D  S    + +  K  IIG  + G+ T+ +E   
Sbjct: 997  VADAAKSGENAENSDSATDESNINQPDKRSSTRIQKMHPKELIIGDPNRGVTTRSRE--- 1056

Query: 483  YMKMVVDLCYNSTIEPSTVHSALKDEYWLNAMQEELLQFRR------------------- 542
             +++V + C+ S IEP  V  AL DE+W+NAMQEEL QF+R                   
Sbjct: 1057 -VEIVSNSCFVSKIEPKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTK 1116

Query: 543  ----NNTDEAGCVTKNKARLVAQGYNQVEGIEFDETFAPVARLEAIQLLLGISCIQKFKL 602
                N T+E G +T+NKARLVAQGY Q+EG++FDETFAPVARLE+I+LLLG++CI KFKL
Sbjct: 1117 WIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAPVARLESIRLLLGVACILKFKL 1176

Query: 603  YQIDVKSVFLNDYLNEEVYVAQPKGFVDSEHPKHVYKLNKSLYGLKQAPRAWYERLTVYL 662
            YQ+DVKS FLN YLNEEVYV QPKGF D  HP HVY+L K+LYGLKQAPRAWYERLT +L
Sbjct: 1177 YQMDVKSAFLNGYLNEEVYVEQPKGFADPTHPDHVYRLKKALYGLKQAPRAWYERLTEFL 1236

Query: 663  KGKEYSRGEIVKTLFIHRKSDQLLVAQIYVDVIIFGGFPQDLVNNFINIMQSEFEMSMVG 722
              + Y +G I KTLF+ + ++ L++AQIYVD I+FGG   +++ +F+  MQSEFEMS+VG
Sbjct: 1237 TQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMSLVG 1296

Query: 723  ELSYFLGLQIKQKNDGIFISQEKYAKDMVKKFGLEQARNKRTPAAAHVKLTRDTDGAEVG 782
            EL+YFLGLQ+KQ  D IF+SQ +YAK++VKKFG+E A +KRTPA  H+KL++D  G  V 
Sbjct: 1297 ELTYFLGLQVKQMEDSIFLSQSRYAKNIVKKFGMENASHKRTPAPTHLKLSKDEAGTSVD 1356

Query: 783  HKLYRSIVGSLLYLTASRPDIAYVVGICARFQADPCISHLEVVKRILKYVHGTSDFGMMY 842
             K YRS++GSLLYLTASRPDI Y VG+CAR+QA+P ISHL  VKRILKYV+GTSD+G+MY
Sbjct: 1357 QKPYRSMIGSLLYLTASRPDITYAVGVCARYQANPKISHLNQVKRILKYVNGTSDYGIMY 1416

Query: 843  FYGTTPTLVGYCDADWTGSADDRKSTSEGCFFLGNNLISWLSKKQNCVSLSTAEAEYIAT 902
             + ++  LVGYCDADW GSADDRKSTS GCF+LGNNLISW SKKQNCVSLSTAEAEYIA 
Sbjct: 1417 CHCSSSMLVGYCDADWAGSADDRKSTSGGCFYLGNNLISWFSKKQNCVSLSTAEAEYIAA 1476

Query: 903  GSGCTQLIWMKNMLHEYRFDQDTMTLYYDNMSAIDISKNPIQHSRTKHIDIRHHFIHELV 944
            GS C+QL+WMK ML EY  +QD MTLY DNMSAI+ISKNP+QHSRTKHIDIRHH+I +LV
Sbjct: 1477 GSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAINISKNPVQHSRTKHIDIRHHYIRDLV 1536

[Close]

BLAST of Pay0020653 vs. NCBI nr
Match: AAO73529.1 (gag-pol polyprotein [Glycine max])

HSP 1 Score: 1015.4 bits (2624), Expect = 3.2e-292
Identity = 512/880 (58.18%), Postives = 639/880 (72.61%), Query Frame = 0


Query: 123  GHVSMKGLEKVIKNEAILEILDLDVNRKFFCGDCQISKQTRSTHKSLKECYTNRVLELLH 182
            GH+ ++G++K+I   A+  I +L +     CG+CQI KQ + +H+ L+   T+RVLELLH
Sbjct: 698  GHLHLRGMKKIIDKGAVRGIPNLKIEEGRICGECQIGKQVKMSHQKLQHQTTSRVLELLH 757

Query: 183  MDLMGPMQTESLRGKRYMLVVVDDYSRYTWVCFPKGKTDTVEICKNLCLKLQREKGKKIT 242
            MDLMGPMQ ESL GKRY  VVVDD+SR+TWV F + K+DT E+ K L L+LQREK   I 
Sbjct: 758  MDLMGPMQVESLGGKRYAYVVVDDFSRFTWVNFIREKSDTFEVFKELSLRLQREKDCVIK 817

Query: 243  RIRSDHGKDFDNEGFNSFS---------------------ERKNRTLQEMTRVMIHAKNL 302
            RIRSDHG++F+N  F  F                      ERKNRTLQE  RVM+HAK L
Sbjct: 818  RIRSDHGREFENSKFTEFCTSEGITHEFSAAITPQQNGIVERKNRTLQEAARVMLHAKEL 877

Query: 303  PLCFWAEAVNTTCHIHNRVTIRTGMTVTLYELWKEREPNIKYFHVFGSTCYILADKEYRQ 362
            P   WAEA+NT C+IHNRVT+R G   TLYE+WK R+P +K+FH+FGS CYILAD+E R+
Sbjct: 878  PYNLWAEAMNTACYIHNRVTLRRGTPTTLYEIWKGRKPTVKHFHIFGSPCYILADREQRR 937

Query: 363  KWDARSEQGIFLGYSQNSRAYKVFNNRSESVMETINVVINDLDSAIKQMNDEEDETPNMS 422
            K D +S+ GIFLGYS NSRAY+VFN+R+ +VME+INVV++DL  A K+  +E+  T   +
Sbjct: 938  KMDPKSDAGIFLGYSTNSRAYRVFNSRTRTVMESINVVVDDLTPARKKDVEEDVRTSGDN 997

Query: 423  EASTTSTVE-VSKADNPSDDPGKSL--------------KNSIIGGSSAGMQTKRKEKID 482
             A T  + E    +D+ +D+P  +               K  IIG  + G+ T+ +E   
Sbjct: 998  VADTAKSAENAENSDSATDEPNINQPDKRPSIRIQKMHPKELIIGDPNRGVTTRSRE--- 1057

Query: 483  YMKMVVDLCYNSTIEPSTVHSALKDEYWLNAMQEELLQFRR------------------- 542
             +++V + C+ S IEP  V  AL DE+W+NAMQEEL QF+R                   
Sbjct: 1058 -IEIVSNSCFVSKIEPKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTK 1117

Query: 543  ----NNTDEAGCVTKNKARLVAQGYNQVEGIEFDETFAPVARLEAIQLLLGISCIQKFKL 602
                N T+E G +T+NKARLVAQGY Q+EG++FDETFAPVARLE+I+LLLG++CI KFKL
Sbjct: 1118 WIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAPVARLESIRLLLGVACILKFKL 1177

Query: 603  YQIDVKSVFLNDYLNEEVYVAQPKGFVDSEHPKHVYKLNKSLYGLKQAPRAWYERLTVYL 662
            YQ+DVKS FLN YLNEE YV QPKGFVD  HP HVY+L K+LYGLKQAPRAWYERLT +L
Sbjct: 1178 YQMDVKSAFLNGYLNEEAYVEQPKGFVDPTHPDHVYRLKKALYGLKQAPRAWYERLTEFL 1237

Query: 663  KGKEYSRGEIVKTLFIHRKSDQLLVAQIYVDVIIFGGFPQDLVNNFINIMQSEFEMSMVG 722
              + Y +G I KTLF+ + ++ L++AQIYVD I+FGG   +++ +F+  MQSEFEMS+VG
Sbjct: 1238 TQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMSLVG 1297

Query: 723  ELSYFLGLQIKQKNDGIFISQEKYAKDMVKKFGLEQARNKRTPAAAHVKLTRDTDGAEVG 782
            EL+YFLGLQ+KQ  D IF+SQ KYAK++VKKFG+E A +KRTPA  H+KL++D  G  V 
Sbjct: 1298 ELTYFLGLQVKQMEDSIFLSQSKYAKNIVKKFGMENASHKRTPAPTHLKLSKDEAGTSVD 1357

Query: 783  HKLYRSIVGSLLYLTASRPDIAYVVGICARFQADPCISHLEVVKRILKYVHGTSDFGMMY 842
              LYRS++GSLLYLTASRPDI Y VG+CAR+QA+P ISHL  VKRILKYV+GTSD+G+MY
Sbjct: 1358 QSLYRSMIGSLLYLTASRPDITYAVGVCARYQANPKISHLNQVKRILKYVNGTSDYGIMY 1417

Query: 843  FYGTTPTLVGYCDADWTGSADDRKSTSEGCFFLGNNLISWLSKKQNCVSLSTAEAEYIAT 902
             + +   LVGYCDADW GSADDRKSTS GCF+LGNNLISW SKKQNCVSLSTAEAEYIA 
Sbjct: 1418 CHCSGSMLVGYCDADWAGSADDRKSTSGGCFYLGNNLISWFSKKQNCVSLSTAEAEYIAA 1477

Query: 903  GSGCTQLIWMKNMLHEYRFDQDTMTLYYDNMSAIDISKNPIQHSRTKHIDIRHHFIHELV 944
            GS C+QL+WMK ML EY  +QD MTLY DNMSAI+ISKNP+QHSRTKHIDIRHH+I ELV
Sbjct: 1478 GSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAINISKNPVQHSRTKHIDIRHHYIRELV 1537

[Close]

BLAST of Pay0020653 vs. NCBI nr
Match: AAO73521.1 (gag-pol polyprotein [Glycine max])

HSP 1 Score: 1012.3 bits (2616), Expect = 2.7e-291
Identity = 561/1166 (48.11%), Postives = 714/1166 (61.23%), Query Frame = 0


Query: 4    ISSLKLKLREVQNENDQILKSVKMLNSGTKNLDSILKSGHNGSHRYGLGF---------- 63
            IS LK ++  + ++ + + KS+KMLN G+  LD +L  G N  ++ GLGF          
Sbjct: 409  ISELKGEVGFLNSKLENMTKSIKMLNKGSDTLDEVLLLGKNAGNQRGLGFNPKSAGRTTM 468

Query: 64   ------------VASASRAMHN-------------LALSGELNLLKDVRLPLHPF----- 123
                          S  R+ H+                 G+   +K     LHP      
Sbjct: 469  TEFVPAKNRTGATMSQHRSRHHGMQQKKSKRKKWRCHYCGKYGHIKPFCYHLHPHHGTQS 528

Query: 124  ---RPQMM---------------------------------------------HCVTGHV 183
               R +MM                                              C T +V
Sbjct: 529  SNSRKKMMWVPKHKAVSLVVHTSLRASAKEDWYLDSGCSRHMTGVKEFLLNIEPCSTSYV 588

Query: 184  TFGDGTKGKIIAKGNIDKNNLPRLNDL--------------------------------- 243
            TFGDG+KGKII  G +  + LP LN +                                 
Sbjct: 589  TFGDGSKGKIIGMGKLVHDGLPSLNKVLLVKGLTANLISISQLCDEGFNVNFTKSECLVT 648

Query: 244  ----------------------------------------------GHVSMKGLEKVIKN 303
                                                          GH+ ++G++K+I  
Sbjct: 649  NEKSEVLMKGSRSKDNCYLWTPQETSYSSTCLSSKEDEVRIWHQRFGHLHLRGMKKIIDK 708

Query: 304  EAILEILDLDVNRKFFCGDCQISKQTRSTHKSLKECYTNRVLELLHMDLMGPMQTESLRG 363
             A+  I +L +     CG+CQI KQ + +H+ L+   T+RVLELLHMDLMGPMQ ESL G
Sbjct: 709  GAVRGIPNLKIEEGRICGECQIGKQVKMSHQKLQHQTTSRVLELLHMDLMGPMQVESLGG 768

Query: 364  KRYMLVVVDDYSRYTWVCFPKGKTDTVEICKNLCLKLQREKGKKITRIRSDHGKDFDN-- 423
            KRY  VVVDD+SR+TWV F + K++T E+ K L L+LQREK   I RIRSDHG++F+N  
Sbjct: 769  KRYAYVVVDDFSRFTWVKFIREKSETFEVFKELSLRLQREKDCVIKRIRSDHGREFENSR 828

Query: 424  -------EGF------------NSFSERKNRTLQEMTRVMIHAKNLPLCFWAEAVNTTCH 483
                   EG             N   ERKNRTLQE  RVM+HAK LP   WAEA+NT C+
Sbjct: 829  LTEFCTSEGITHEFSAAITPQQNGIVERKNRTLQEAARVMLHAKELPYNLWAEAMNTACY 888

Query: 484  IHNRVTIRTGMTVTLYELWKEREPNIKYFHVFGSTCYILADKEYRQKWDARSEQGIFLGY 543
            IHNRVT+R G   TLYE+WK R+P++K+FH+FGS CYILAD+E R+K D +S+ GIFLGY
Sbjct: 889  IHNRVTLRRGTPTTLYEIWKGRKPSVKHFHIFGSPCYILADREQRRKMDPKSDAGIFLGY 948

Query: 544  SQNSRAYKVFNNRSESVMETINVVINDLDSAIKQMNDEEDET--PNMSEA---------- 603
            S NSRAY+VFN+R+ +VME+INVV++DL  A K+  +E+  T   N+++A          
Sbjct: 949  STNSRAYRVFNSRTRTVMESINVVVDDLSPARKKDVEEDVRTSGDNVADAAKSGENAENS 1008

Query: 604  -STTSTVEVSKADNPSDDPGKSL--KNSIIGGSSAGMQTKRKEKIDYMKMVVDLCYNSTI 663
             S T    +++ D  S    + +  K  IIG  + G+ T+ +E    +++V + C+ S I
Sbjct: 1009 DSATDESNINQPDKRSSTRIQKMHPKELIIGDPNRGVTTRSRE----VEIVSNSCFVSKI 1068

Query: 664  EPSTVHSALKDEYWLNAMQEELLQFRR-----------------------NNTDEAGCVT 723
            EP  V  AL DE+W+NAMQEEL QF+R                       N T+E G +T
Sbjct: 1069 EPKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEGVIT 1128

Query: 724  KNKARLVAQGYNQVEGIEFDETFAPVARLEAIQLLLGISCIQKFKLYQIDVKSVFLNDYL 783
            +NKARLVAQGY Q+EG++FDETFAPVARLE+I+LLLG++CI KFKLYQ+DVKS FLN YL
Sbjct: 1129 RNKARLVAQGYTQIEGVDFDETFAPVARLESIRLLLGVACILKFKLYQMDVKSAFLNGYL 1188

Query: 784  NEEVYVAQPKGFVDSEHPKHVYKLNKSLYGLKQAPRAWYERLTVYLKGKEYSRGEIVKTL 843
            NEEVYV QPKGF D  HP HVY+L K+LYGLKQAPRAWYERLT +L  + Y +G I KTL
Sbjct: 1189 NEEVYVEQPKGFADPTHPDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTL 1248

Query: 844  FIHRKSDQLLVAQIYVDVIIFGGFPQDLVNNFINIMQSEFEMSMVGELSYFLGLQIKQKN 903
            F+ + ++ L++AQIYVD I+FGG   +++ +F+  MQSEFEMS+VGEL+YFLGLQ+KQ  
Sbjct: 1249 FVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQVKQME 1308

Query: 904  DGIFISQEKYAKDMVKKFGLEQARNKRTPAAAHVKLTRDTDGAEVGHKLYRSIVGSLLYL 944
            D IF+SQ +YAK++VKKFG+E A +KRTPA  H+KL++D  G  V   LYRS++GSLLYL
Sbjct: 1309 DSIFLSQSRYAKNIVKKFGMENASHKRTPAPTHLKLSKDEAGTSVDQSLYRSMIGSLLYL 1368

[Close]

BLAST of Pay0020653 vs. NCBI nr
Match: AAO73527.1 (gag-pol polyprotein [Glycine max])

HSP 1 Score: 1012.3 bits (2616), Expect = 2.7e-291
Identity = 511/880 (58.07%), Postives = 642/880 (72.95%), Query Frame = 0


Query: 123  GHVSMKGLEKVIKNEAILEILDLDVNRKFFCGDCQISKQTRSTHKSLKECYTNRVLELLH 182
            GH+ ++G++K+I   A+  I +L +     CG+CQI KQ + +H+ L+   T+RVLELLH
Sbjct: 697  GHLHLRGMKKIIDKGAVRGIPNLKIEEGRICGECQIGKQVKMSHQKLRHQTTSRVLELLH 756

Query: 183  MDLMGPMQTESLRGKRYMLVVVDDYSRYTWVCFPKGKTDTVEICKNLCLKLQREKGKKIT 242
            MDLMGPMQ ESL GKRY  VVVDD+SR+TWV F + K++T E+ K L L+LQREK   I 
Sbjct: 757  MDLMGPMQVESLGGKRYAYVVVDDFSRFTWVNFIREKSETFEVFKELSLRLQREKDCVIK 816

Query: 243  RIRSDHGKDFDNEGFNSFS---------------------ERKNRTLQEMTRVMIHAKNL 302
            RIRSDHG++F+N  F  F                      ERKNRTLQE  RVM+HAK L
Sbjct: 817  RIRSDHGREFENSRFTEFCTSEGITHEFSAAITPQQNGIVERKNRTLQEAARVMLHAKEL 876

Query: 303  PLCFWAEAVNTTCHIHNRVTIRTGMTVTLYELWKEREPNIKYFHVFGSTCYILADKEYRQ 362
            P   WAEA+NT C+IHNRVT+R G   TLYE+WK R+P++K+FH+FGS CYILAD+E R+
Sbjct: 877  PYNLWAEAMNTACYIHNRVTLRRGTPTTLYEIWKGRKPSVKHFHIFGSPCYILADREQRR 936

Query: 363  KWDARSEQGIFLGYSQNSRAYKVFNNRSESVMETINVVINDLDSAIKQMNDEEDET--PN 422
            K D +S+ GIFLGYS NSRAY+VFN+R+ +VME+INVV++DL  A K+  +E+  T   N
Sbjct: 937  KMDPKSDAGIFLGYSTNSRAYRVFNSRTRTVMESINVVVDDLSPARKKDVEEDVRTLGDN 996

Query: 423  MSEA-----------STTSTVEVSKADNPSDDPGKSL--KNSIIGGSSAGMQTKRKEKID 482
            +++A           S T    +++ D  S    + +  K  IIG  + G+ T+ +E   
Sbjct: 997  VADAAKSGENAENSDSATDESNINQPDKRSSTRIQKMHPKELIIGDPNRGVTTRSRE--- 1056

Query: 483  YMKMVVDLCYNSTIEPSTVHSALKDEYWLNAMQEELLQFRR------------------- 542
             +++V + C+ S IEP  V  AL DE+W+NAMQEEL QF+R                   
Sbjct: 1057 -VEIVSNSCFVSKIEPKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTK 1116

Query: 543  ----NNTDEAGCVTKNKARLVAQGYNQVEGIEFDETFAPVARLEAIQLLLGISCIQKFKL 602
                N T+E G +T+NKARLVAQGY Q+EG++FDETFAPVARLE+I+LLLG++CI KFKL
Sbjct: 1117 WIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAPVARLESIRLLLGVACILKFKL 1176

Query: 603  YQIDVKSVFLNDYLNEEVYVAQPKGFVDSEHPKHVYKLNKSLYGLKQAPRAWYERLTVYL 662
            YQ+DVKS FLN YLNEEVYV QPKGF D  HP HVY+L K+LYGLKQAPRAWYERLT +L
Sbjct: 1177 YQMDVKSAFLNGYLNEEVYVEQPKGFADPTHPDHVYRLKKALYGLKQAPRAWYERLTEFL 1236

Query: 663  KGKEYSRGEIVKTLFIHRKSDQLLVAQIYVDVIIFGGFPQDLVNNFINIMQSEFEMSMVG 722
              + Y +G I KTLF+ + ++ L++AQIYVD I+FGG   +++ +F+  MQSEFEMS+VG
Sbjct: 1237 TQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMSLVG 1296

Query: 723  ELSYFLGLQIKQKNDGIFISQEKYAKDMVKKFGLEQARNKRTPAAAHVKLTRDTDGAEVG 782
            EL+YFLGLQ+KQ  D IF+SQ +YAK++VKKFG+E A +KRTPA  H+KL++D  G  V 
Sbjct: 1297 ELTYFLGLQVKQMEDSIFLSQSRYAKNIVKKFGMENASHKRTPAPTHLKLSKDEAGTSVD 1356

Query: 783  HKLYRSIVGSLLYLTASRPDIAYVVGICARFQADPCISHLEVVKRILKYVHGTSDFGMMY 842
              LYRS++GSLLYLTASRPDI Y VG+CAR+QA+P ISHL  VKRILKYV+GTSD+G+MY
Sbjct: 1357 QSLYRSMIGSLLYLTASRPDITYAVGVCARYQANPKISHLTQVKRILKYVNGTSDYGIMY 1416

Query: 843  FYGTTPTLVGYCDADWTGSADDRKSTSEGCFFLGNNLISWLSKKQNCVSLSTAEAEYIAT 902
             + + P LVGYCDADW GSADDRKSTS GCF+LGNNLISW SKKQNCVSLSTAEAEYIA 
Sbjct: 1417 CHCSNPMLVGYCDADWAGSADDRKSTSGGCFYLGNNLISWFSKKQNCVSLSTAEAEYIAA 1476

Query: 903  GSGCTQLIWMKNMLHEYRFDQDTMTLYYDNMSAIDISKNPIQHSRTKHIDIRHHFIHELV 944
            GS C+QL+WMK ML EY  +QD MTLY DNMSAI+ISKNP+QHSRTKHIDIRHH+I +LV
Sbjct: 1477 GSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAINISKNPVQHSRTKHIDIRHHYIRDLV 1536

[Close]

BLAST of Pay0020653 vs. NCBI nr
Match: MCH79363.1 (gag-pol polyprotein [Trifolium medium])

HSP 1 Score: 1011.1 bits (2613), Expect = 6.1e-291
Identity = 513/877 (58.49%), Postives = 641/877 (73.09%), Query Frame = 0


Query: 122  LGHVSMKGLEKVIKNEAILEILDLDVNRKFFCGDCQISKQTRSTHKSLKECYTNRVLELL 181
            LGH+ +KG++K I  EAI  +  L +     CG+CQI KQT+ +H  L+   T+RVLELL
Sbjct: 427  LGHLHLKGMKKAIAEEAIRGLPKLKIEEGSICGECQIGKQTKMSHPKLQHLTTSRVLELL 486

Query: 182  HMDLMGPMQTESLRGKRYMLVVVDDYSRYTWVCFPKGKTDTVEICKNLCLKLQREKGKKI 241
            HMDLMGPMQ ES+ GKRY  V+VDD+SR+TW+ F K K+D+ E+ KNLCL+LQREK   I
Sbjct: 487  HMDLMGPMQVESIGGKRYAFVMVDDFSRFTWIDFLKEKSDSFEVFKNLCLQLQREKNTVI 546

Query: 242  TRIRSDHGKDFDNEGF---------------------NSFSERKNRTLQEMTRVMIHAKN 301
             RIRSDHGK+F+N  F                     N   ERKNRT+QE  RVM+HAK+
Sbjct: 547  VRIRSDHGKEFENAKFLEFCSSEGIKHEFSSPITPQQNGVVERKNRTIQESARVMLHAKH 606

Query: 302  LPLCFWAEAVNTTCHIHNRVTIRTGMTVTLYELWKEREPNIKYFHVFGSTCYILADKEYR 361
            LP   WAEA+NT C+IHNRVT+R+G + TLYELWK R+P +K+FHVFGS CYILAD+E R
Sbjct: 607  LPKNLWAEAMNTACYIHNRVTLRSGTSTTLYELWKGRKPTVKHFHVFGSKCYILADREPR 666

Query: 362  QKWDARSEQGIFLGYSQNSRAYKVFNNRSESVMETINVVINDLDSA--------IKQMND 421
            +K D +SE+GIFLGYS NSRAY+V N+R++ +ME+INVV++D  SA        +   +D
Sbjct: 667  RKLDPKSEEGIFLGYSTNSRAYRVMNSRTKVIMESINVVVDDTTSAKTYDVEPDVTTSDD 726

Query: 422  --EEDETPNMSEASTTSTVEVSKADNPSDDPGKS-LKNSIIGGSSAGMQTKRKEKIDYMK 481
              EE E  +  EAST+    V+K   PS    K+  K+ IIG  + G+ T+R       +
Sbjct: 727  PVEETEPESDDEASTSDLAPVNKV--PSIRIQKNHPKDLIIGSPTQGITTRRSN-----E 786

Query: 482  MVVDLCYNSTIEPSTVHSALKDEYWLNAMQEELLQFR----------------------- 541
             + + C+ S IEP  V  AL DE+W+ AMQEEL QF+                       
Sbjct: 787  NISNACFVSKIEPKNVKEALTDEFWIEAMQEELTQFKRSEVWDLVPRPCNVNVIGTKWVY 846

Query: 542  RNNTDEAGCVTKNKARLVAQGYNQVEGIEFDETFAPVARLEAIQLLLGISCIQKFKLYQI 601
            RN +DE G VT+NKARLVAQGY+QVEG++FDETFAPVARLE+I+LL+G++CI +FKLYQ+
Sbjct: 847  RNKSDENGVVTRNKARLVAQGYSQVEGLDFDETFAPVARLESIRLLIGVACILRFKLYQM 906

Query: 602  DVKSVFLNDYLNEEVYVAQPKGFVDSEHPKHVYKLNKSLYGLKQAPRAWYERLTVYLKGK 661
            DVKS FLN YL+EEVYV QPKGF+D  +P HVYKL K+LYGLKQAPRAWYERLT++L  +
Sbjct: 907  DVKSAFLNGYLHEEVYVEQPKGFIDPSYPDHVYKLKKALYGLKQAPRAWYERLTIFLVSQ 966

Query: 662  EYSRGEIVKTLFIHRKSDQLLVAQIYVDVIIFGGFPQDLVNNFINIMQSEFEMSMVGELS 721
             Y +G   KTLF+  K+  L++AQIYVD I+FGG   ++V +F+  MQSEFEMS+VGEL+
Sbjct: 967  GYRKGGNDKTLFVKEKNGNLMIAQIYVDDIVFGGMSNEMVQHFVQQMQSEFEMSLVGELT 1026

Query: 722  YFLGLQIKQKNDGIFISQEKYAKDMVKKFGLEQARNKRTPAAAHVKLTRDTDGAEVGHKL 781
            YFLGLQ+KQ  D IF+SQ KYAK++VKKFG+E A  KRTPAA H+KLTRD  G  V   +
Sbjct: 1027 YFLGLQVKQMEDTIFVSQSKYAKNIVKKFGMESAAYKRTPAATHLKLTRDEKGVNVDQSM 1086

Query: 782  YRSIVGSLLYLTASRPDIAYVVGICARFQADPCISHLEVVKRILKYVHGTSDFGMMYFYG 841
            Y+S++GSLLYLTASRPDI + VG+CAR+QA+P +SHL  VKRILKY++GTSD+G++Y   
Sbjct: 1087 YKSMIGSLLYLTASRPDITFAVGVCARYQAEPKMSHLIQVKRILKYINGTSDYGILYSQT 1146

Query: 842  TTPTLVGYCDADWTGSADDRKSTSEGCFFLGNNLISWLSKKQNCVSLSTAEAEYIATGSG 901
                LVGYCDADW GSADDRKSTS GCFFLGNNLISW SKKQNCVSLSTAEAEYIA GS 
Sbjct: 1147 KNSNLVGYCDADWAGSADDRKSTSGGCFFLGNNLISWFSKKQNCVSLSTAEAEYIAAGSS 1206

Query: 902  CTQLIWMKNMLHEYRFDQDTMTLYYDNMSAIDISKNPIQHSRTKHIDIRHHFIHELVEDK 944
            C+QL+WMK ML +Y   QD MTL+ DN+SAI+ISKNPIQHSRTKHIDIRHHFI +LVE+ 
Sbjct: 1207 CSQLLWMKQMLKDYNVPQDVMTLFCDNLSAINISKNPIQHSRTKHIDIRHHFIRDLVEEN 1266

[Close]

BLAST of Pay0020653 vs. NCBI nr
Match: AAO73523.1 (gag-pol polyprotein [Glycine max])

HSP 1 Score: 1006.5 bits (2601), Expect = 1.5e-289
Identity = 508/880 (57.73%), Postives = 641/880 (72.84%), Query Frame = 0


Query: 123  GHVSMKGLEKVIKNEAILEILDLDVNRKFFCGDCQISKQTRSTHKSLKECYTNRVLELLH 182
            GH+ ++G++K++   A+  I +L +     CG+CQI KQ + +H+ L+   T+RVLELLH
Sbjct: 697  GHLHLRGMKKILDKSAVRGIPNLKIEEGRICGECQIGKQVKMSHQKLQHQTTSRVLELLH 756

Query: 183  MDLMGPMQTESLRGKRYMLVVVDDYSRYTWVCFPKGKTDTVEICKNLCLKLQREKGKKIT 242
            MDLMGPMQ ESL GKRY  VVVDD+SR+TWV F + K+ T E+ K L L+LQREK   I 
Sbjct: 757  MDLMGPMQVESLGGKRYAYVVVDDFSRFTWVNFIREKSGTFEVFKKLSLRLQREKDCVIK 816

Query: 243  RIRSDHGKDFDNEGFNSFS---------------------ERKNRTLQEMTRVMIHAKNL 302
            RIRSDHG++F+N  F  F                      ERKNRTLQE  RVM+HAK L
Sbjct: 817  RIRSDHGREFENSRFTEFCTSEGITHEFSAAITPQQNGIVERKNRTLQEAARVMLHAKEL 876

Query: 303  PLCFWAEAVNTTCHIHNRVTIRTGMTVTLYELWKEREPNIKYFHVFGSTCYILADKEYRQ 362
            P   WAEA+NT C+IHNRVT+R G   TLYE+WK R+P++K+FH+FGS CYILAD+E R+
Sbjct: 877  PYNLWAEAMNTACYIHNRVTLRRGTPTTLYEIWKGRKPSVKHFHIFGSPCYILADREQRR 936

Query: 363  KWDARSEQGIFLGYSQNSRAYKVFNNRSESVMETINVVINDLDSAIKQMNDEEDET--PN 422
            K D +S+ GIFLGYS NSRAY+VFN+R+ +VME+INVV++DL  A K+  +E+  T   N
Sbjct: 937  KMDPKSDAGIFLGYSTNSRAYRVFNSRTRTVMESINVVVDDLSPARKKDVEEDVRTSGDN 996

Query: 423  MSEA-----------STTSTVEVSKADNPSDDPGKSL--KNSIIGGSSAGMQTKRKEKID 482
            +++A           S T    +++ D  S    + +  K  IIG  + G+ T+ +E   
Sbjct: 997  VADAAKSGENAENSDSATDESNINQPDKRSSTRIQKMHPKELIIGDPNRGVTTRSRE--- 1056

Query: 483  YMKMVVDLCYNSTIEPSTVHSALKDEYWLNAMQEELLQFRR------------------- 542
             +++V + C+ S IEP  V  AL DE+W+NAMQEEL QF+R                   
Sbjct: 1057 -VEIVSNSCFVSKIEPKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTK 1116

Query: 543  ----NNTDEAGCVTKNKARLVAQGYNQVEGIEFDETFAPVARLEAIQLLLGISCIQKFKL 602
                N T+E G +T+NKARLVAQGY Q+EG++FDETFAPVARLE+I+LLLG++CI KFKL
Sbjct: 1117 WIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAPVARLESIRLLLGVACILKFKL 1176

Query: 603  YQIDVKSVFLNDYLNEEVYVAQPKGFVDSEHPKHVYKLNKSLYGLKQAPRAWYERLTVYL 662
            YQ+DVKS FLN YLNEEVYV QPKGF D  HP HVY+L K+LYGLKQAPRAWYERLT +L
Sbjct: 1177 YQMDVKSAFLNGYLNEEVYVEQPKGFADPTHPDHVYRLKKALYGLKQAPRAWYERLTEFL 1236

Query: 663  KGKEYSRGEIVKTLFIHRKSDQLLVAQIYVDVIIFGGFPQDLVNNFINIMQSEFEMSMVG 722
              + Y +G I KTLF+ + ++ L++AQIYVD I+FGG   +++ +F+  MQSEFEMS+VG
Sbjct: 1237 TQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMSLVG 1296

Query: 723  ELSYFLGLQIKQKNDGIFISQEKYAKDMVKKFGLEQARNKRTPAAAHVKLTRDTDGAEVG 782
            EL+YFLGLQ+KQ  D IF+SQ +YAK++VKKFG+E A +KRTPA  H+KL++D  G  V 
Sbjct: 1297 ELTYFLGLQVKQMEDSIFLSQSRYAKNIVKKFGMENASHKRTPAPTHLKLSKDEAGTSVD 1356

Query: 783  HKLYRSIVGSLLYLTASRPDIAYVVGICARFQADPCISHLEVVKRILKYVHGTSDFGMMY 842
             K YRS++GSLLYLTASRPDI Y VG+CAR+QA+P ISHL  VKRILKYV+GTSD+G+MY
Sbjct: 1357 QKPYRSMIGSLLYLTASRPDITYAVGVCARYQANPKISHLNQVKRILKYVNGTSDYGIMY 1416

Query: 843  FYGTTPTLVGYCDADWTGSADDRKSTSEGCFFLGNNLISWLSKKQNCVSLSTAEAEYIAT 902
             + ++  LVGYCDADW GSADDRKSTS GCF+LGNNLISW SKKQNCVSLSTAEAEYIA 
Sbjct: 1417 CHCSSSMLVGYCDADWAGSADDRKSTSGGCFYLGNNLISWFSKKQNCVSLSTAEAEYIAA 1476

Query: 903  GSGCTQLIWMKNMLHEYRFDQDTMTLYYDNMSAIDISKNPIQHSRTKHIDIRHHFIHELV 944
            GS C+QL+WMK ML EY  +QD MTLY DNMSAI+ISKNP+QHSRTKHIDIRHH+I +LV
Sbjct: 1477 GSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAINISKNPVQHSRTKHIDIRHHYIRDLV 1536

[Close]

BLAST of Pay0020653 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 277.3 bits (708), Expect = 4.5e-74
Identity = 171/487 (35.11%), Postives = 252/487 (51.75%), Query Frame = 0


Query: 443 EKIDYMKMVVDLCYNSTIEPSTVHSALKDEYWLNAMQEELLQFRRNNTDEA--------- 502
           EK+  +     +C     EPST + A +   W  AM +E+      +T E          
Sbjct: 67  EKVSPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKP 126

Query: 503 --------------GCVTKNKARLVAQGYNQVEGIEFDETFAPVARLEAIQLLLGISCIQ 562
                         G + + KARLVA+GY Q EGI+F ETF+PV +L +++L+L IS I 
Sbjct: 127 IGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIY 186

Query: 563 KFKLYQIDVKSVFLNDYLNEEVYVAQPKGFV----DSEHPKHVYKLNKSLYGLKQAPRAW 622
            F L+Q+D+ + FLN  L+EE+Y+  P G+     DS  P  V  L KS+YGLKQA R W
Sbjct: 187 NFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQW 246

Query: 623 YERLTVYLKGKEYSRGEIVKTLFIHRKSDQLLVAQIYVDVIIFGGFPQDLVNNFINIMQS 682
           + + +V L G  + +     T F+   +   L   +YVD II        V+   + ++S
Sbjct: 247 FLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKS 306

Query: 683 EFEMSMVGELSYFLGLQIKQKNDGIFISQEKYAKDMVKKFGLEQARNKRTPAAAHVKLTR 742
            F++  +G L YFLGL+I +   GI I Q KYA D++ + GL   +    P    V  + 
Sbjct: 307 CFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSA 366

Query: 743 DTDGAEVGHKLYRSIVGSLLYLTASRPDIAYVVGICARFQADPCISHLEVVKRILKYVHG 802
            + G  V  K YR ++G L+YL  +R DI++ V   ++F   P ++H + V +IL Y+ G
Sbjct: 367 HSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKG 426

Query: 803 TSDFGMMYFYGTTPTLVGYCDADWTGSADDRKSTSEGCFFLGNNLISWLSKKQNCVSLST 862
           T   G+ Y       L  + DA +    D R+ST+  C FLG +LISW SKKQ  VS S+
Sbjct: 427 TVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSS 486

Query: 863 AEAEYIATGSGCTQLIWMKNMLHEYRFDQDTMTLYY-DNMSAIDISKNPIQHSRTKHIDI 902
           AEAEY A      +++W+     E +      TL + DN +AI I+ N + H RTKHI+ 
Sbjct: 487 AEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIES 546

[Close]

BLAST of Pay0020653 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 153.7 bits (387), Expect = 7.5e-37
Identity = 84/223 (37.67%), Postives = 125/223 (56.05%), Query Frame = 0


Query: 631 IYVDVIIFGGFPQDLVNNFINIMQSEFEMSMVGELSYFLGLQIKQKNDGIFISQEKYAKD 690
           +YVD I+  G    L+N  I  + S F M  +G + YFLG+QIK    G+F+SQ KYA+ 
Sbjct: 5   LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64

Query: 691 MVKKFGLEQARNKRTPAAAHVKLTRDTDGAEVGHKL-YRSIVGSLLYLTASRPDIAYVVG 750
           ++   G+   +   TP    +KL      A+      +RSIVG+L YLT +RPDI+Y V 
Sbjct: 65  ILNNAGMLDCKPMSTPLP--LKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVN 124

Query: 751 ICARFQADPCISHLEVVKRILKYVHGTSDFGMMYFYGTTPTLVGYCDADWTGSADDRKST 810
           I  +   +P ++  +++KR+L+YV GT   G+     +   +  +CD+DW G    R+ST
Sbjct: 125 IVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRST 184

Query: 811 SEGCFFLGNNLISWLSKKQNCVSLSTAEAEYIATGSGCTQLIW 853
           +  C FLG N+ISW +K+Q  VS S+ E EY A      +L W
Sbjct: 185 TGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Pay0020653 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 63.2 bits (152), Expect = 1.3e-09
Identity = 44/125 (35.20%), Postives = 60/125 (48.00%), Query Frame = 0


Query: 437 MQTKRKEKIDYMKMVVDLCYNSTI--EPSTVHSALKDEYWLNAMQEELLQFRRNNT---- 496
           M T+ K  I+ +     L   +TI  EP +V  ALKD  W  AMQEEL    RN T    
Sbjct: 1   MLTRSKAGINKLNPKYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILV 60

Query: 497 -------------------DEAGCVTKNKARLVAQGYNQVEGIEFDETFAPVARLEAIQL 537
                                 G + + KARLVA+G++Q EGI F ET++PV R   I+ 
Sbjct: 61  PPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRT 120

The following BLAST results are available for this feature:

BLAST of Pay0020653 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	3.4e-119	31.08	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	1.4e-93	27.27	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	7.4e-90	26.74	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	2.7e-84	33.94	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P92519	1.1e-35	37.67	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Pay0020653 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
Q84VH6	1.6e-292	58.18	Gag-pol polyprotein OS=Glycine max OX=3847 GN=gag-pol PE=4 SV=1	[more]
Q84VI4	1.3e-291	48.11	Gag-pol polyprotein OS=Glycine max OX=3847 GN=gag-pol PE=4 SV=1	[more]
Q84VH8	1.3e-291	58.07	Gag-pol polyprotein OS=Glycine max OX=3847 GN=gag-pol PE=4 SV=1	[more]
A0A392LWM0	2.9e-291	58.49	Gag-pol polyprotein (Fragment) OS=Trifolium medium OX=97028 GN=A2U01_0000112 PE=...	[more]
Q84VI2	7.3e-290	57.73	Gag-pol polyprotein OS=Glycine max OX=3847 GN=gag-pol PE=4 SV=1	[more]

BLAST of Pay0020653 vs. NCBI nr


Match Name	E-value	Identity	Description
AAO73529.1	3.2e-292	58.18	gag-pol polyprotein [Glycine max]	[more]
AAO73521.1	2.7e-291	48.11	gag-pol polyprotein [Glycine max]	[more]
AAO73527.1	2.7e-291	58.07	gag-pol polyprotein [Glycine max]	[more]
MCH79363.1	6.1e-291	58.49	gag-pol polyprotein [Trifolium medium]	[more]
AAO73523.1	1.5e-289	57.73	gag-pol polyprotein [Glycine max]	[more]

BLAST of Pay0020653 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	4.5e-74	35.11	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	7.5e-37	37.67	DNA/RNA polymerases superfamily protein	[more]
ATMG00820.1	1.3e-09	35.20	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 376..396
None	No IPR available	COILS	Coil	Coil	coord: 4..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 400..414
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 392..437
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 421..435
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 152..417 coord: 484..782
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 792..927 e-value: 3.85165E-70 score: 226.966
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 171..259 e-value: 8.6E-16 score: 59.8 coord: 260..331 e-value: 1.1E-6 score: 30.1
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 492..707 e-value: 7.3E-60 score: 202.6
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 167..263 score: 8.713217
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 175..312
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 538..895

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0020653.1	Pay0020653.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding