Pay0016424 (gene) Melon (Payzawat) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSexonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCACTTGCAAATTCAGCTATACAAGAAGTTGATGGCATGGAGAAAAATGGGGGTGGATATTTGAAGAGTTTAGCCATTGGAAAAGGCCATGATCAAAATCCAAATGGTGACTTTGTGTTCCGAGACGCCACGAATTATCAACTCGGGCTACAACAACAACAATCTCTCATCAACTTCGGTCATAAGATGAATAATGAATCTTTGTTGAGCTTTGAAGCACAAGGAATTTGTCAATTAGATCTCACTTATAATTGGGATGATCAGGAACGTGTGATGGAAGATCCTAATTGTTTTCAAACAGCTACAAGTCATAATAATTATAGTCCTTCAAAAGATCATCACCATAATAAAAATGGAAATAGTGGTTCTGTTTACGAGTGGCTTTATTGCGAATCAACAACTGATTTTTCTGATTCCATTCAAGACGCTGAAGGAACTCAAGAGATTGTTCCCAATCACAAGCGATCGCATAGCACGGTACGAAGTTATAAGTTTCGTCTTTGAACTTTTCAAAAAAAAAAAAAAAAAAGAAGTTATTTATTCATTCTTAAATTTTGATTTAATTTGTATGCATATTTGATTTTGACTTATGATATTTTTGGAAATGAAGTTTATGATTAAACACTAGCTAGGCTACACTTCTTTGTCTTATTCTTTACAACTAATTAAAAAAATTGGTTCAAAACCATTTTCCACAGTTCCAGCTAATTTTTAGTTTTTTATAATTTTATTTTTCATCTTCGAATAATTTAGTTGTGGATCCAAATGTTTGTTTGCGAAAGAGGAAAACCTTTAATTACAAAGAAACGGTGAGTAAATTTAAACTATCATTTAGTAAATGGTTATCAAAATAGAGTATATATCAAACTTTAAAACTAACCCATTGGTTTATATATTAGCTAATTTTGAACTTCAAACTCAAAACTTTGTAAAGATGGTAAGATTTGATAATCTTTTTAACATGGGATCCTTATCCTGACGCATTAAGTTAGATTAGTGTTTCTTTTGGTTTACCGTTTTTCGATGGAAAATCCCATTATTTCTTTTTAATTTCTTCCTACTTAGTACTCCATTTGGACAGTGGTTTCATAAACACTTTAATAGTACGTAAAAATGGAGTGAATTTTGTTTGTTGATAAATTGTTGTGAAGTGACTAAGAGGGGAAATAATTTTTTATCGAAAATTGAAAGGGAGAGAGCAGTGGGAGTGTATGCAAGAAGCAATGCACTGCTGCACCTAAGAAACAGAAACCCAAATCAGCAACAGCCAAAGATCCACAAAGCATTGCAGCCAAGGTTTCTAATTAGCTTTCTATTGTTATTTAAATTATTATTTTGCTTGTAATTTAAGGAACAAAAAAAAAAAAATTAATTAAGGTTCTGAAAGAATGTCTGTTTTGTTTTGTATTACTTAGAATCGAAGAGAAAGGATTAGCGAGAGGCTGAAAATACTCCAAGAATTGGTTCCAAATGGCTCTAAGGTGATTCTTGCCATCCTATACTACTTTTTCTTTTCTTAATAAAGAAAATGTTACTTTGTAATTTTGGTTGTTATAGTTTATATAATGTTAAAATTTAGTTTATATGGTGTTGGGTTTATAAATAATCCTATTATAATGAGAATTTTTTCAAATCATACAATTAATAAGTACTATTTATAAAATCATATGTACTCAAATTCTTACATTGGTGTACGAAAAAGATCGTTGATATTTTGAAAGAGGTGTTTTATTGGAAATTTGTTACTTTCTTCACCTAAAAGGTTCTTTCTCATTCAAAACTAAGTCTTCTTAAAAAAATTCTTATTAACATTTACTTTTTCAAATTTTAATGGAAAGAAAAATGCATTTGAAAGAGCGAAAACAAACATTTCATGATAATAATAATAATAAAGAAAACTTTTCTTTTTAGTTCGGATGGATATGTACTTTTAGTTCCTAGATTCTTAAAATGTAAGTTTTTAGTCTCCAGATTTTTAAGAATAAACCCGTTTAGTCTATAAGTTTTTTAAAATAATCATATAATATTTAAAATTAGAAGAAAAAAATAGTTTTAGGGAGTATGATTTTTAAAGATTATTTTTTAAATTTAAATGTCATATAATTATTTAAAATAAAAGTGTAAAAGTGTAAAGTGAAGTTGTTAAATTGTTTTTATGTAAATACTGAAGAAGTAAAGAAATAGCATTTGAAGACGAAAAAATGTAATTTTATTATAGTAATAAGAAGGAGTTATTGTGGTGTAAAGATTTATATGTGAATGTGCATATGGACAGAAACAAAAAGGATTAGGAGAATCAAAAAGAAAGGAATAATTAAGGTGGAAAATAAAAATAATTTAATTTTGCAGGTTGATTTGGTAACCATGTTGGAGAAAGCAATTAGTTATGTCAAATTTCTTCAACTACAAGTGAAGGTGGGTGTTATTTTACTTTCTTTCCAAATTTTGAACTTCATCATTTTCTTTCTTTCTTTCTAATTTCTTTTTAAGATTTCTTCAATTGATAATGAAAATGAAAAATCAGATCCTAGCAACAGATGAATTTTGGCCAGTTCAAGGTGGGAAAGCTCCAGATATTTCACAAGTAAAGGAAGCCATTGATGTCATTCTTTCATCTCAAAGAGAAAGAAGCTCAAGCTCAAACACTGAAAAGTGA ATGTCACTTGCAAATTCAGCTATACAAGAAGTTGATGGCATGGAGAAAAATGGGGGTGGATATTTGAAGAGTTTAGCCATTGGAAAAGGCCATGATCAAAATCCAAATGGTGACTTTGTGTTCCGAGACGCCACGAATTATCAACTCGGGCTACAACAACAACAATCTCTCATCAACTTCGGTCATAAGATGAATAATGAATCTTTGTTGAGCTTTGAAGCACAAGGAATTTGTCAATTAGATCTCACTTATAATTGGGATGATCAGGAACGTGTGATGGAAGATCCTAATTGTTTTCAAACAGCTACAAGTCATAATAATTATAGTCCTTCAAAAGATCATCACCATAATAAAAATGGAAATAGTGGTTCTGTTTACGAGTGGCTTTATTGCGAATCAACAACTGATTTTTCTGATTCCATTCAAGACGCTGAAGGAACTCAAGAGATTGTTCCCAATCACAAGCGATCGCATAGCACGGGAGAGAGCAGTGGGAGTGTATGCAAGAAGCAATGCACTGCTGCACCTAAGAAACAGAAACCCAAATCAGCAACAGCCAAAGATCCACAAAGCATTGCAGCCAAGAATCGAAGAGAAAGGATTAGCGAGAGGCTGAAAATACTCCAAGAATTGGTTCCAAATGGCTCTAAGGTTGATTTGGTAACCATGTTGGAGAAAGCAATTAGTTATGTCAAATTTCTTCAACTACAAGTGAAGATCCTAGCAACAGATGAATTTTGGCCAGTTCAAGGTGGGAAAGCTCCAGATATTTCACAAGTAAAGGAAGCCATTGATGTCATTCTTTCATCTCAAAGAGAAAGAAGCTCAAGCTCAAACACTGAAAAGTGA ATGTCACTTGCAAATTCAGCTATACAAGAAGTTGATGGCATGGAGAAAAATGGGGGTGGATATTTGAAGAGTTTAGCCATTGGAAAAGGCCATGATCAAAATCCAAATGGTGACTTTGTGTTCCGAGACGCCACGAATTATCAACTCGGGCTACAACAACAACAATCTCTCATCAACTTCGGTCATAAGATGAATAATGAATCTTTGTTGAGCTTTGAAGCACAAGGAATTTGTCAATTAGATCTCACTTATAATTGGGATGATCAGGAACGTGTGATGGAAGATCCTAATTGTTTTCAAACAGCTACAAGTCATAATAATTATAGTCCTTCAAAAGATCATCACCATAATAAAAATGGAAATAGTGGTTCTGTTTACGAGTGGCTTTATTGCGAATCAACAACTGATTTTTCTGATTCCATTCAAGACGCTGAAGGAACTCAAGAGATTGTTCCCAATCACAAGCGATCGCATAGCACGGGAGAGAGCAGTGGGAGTGTATGCAAGAAGCAATGCACTGCTGCACCTAAGAAACAGAAACCCAAATCAGCAACAGCCAAAGATCCACAAAGCATTGCAGCCAAGAATCGAAGAGAAAGGATTAGCGAGAGGCTGAAAATACTCCAAGAATTGGTTCCAAATGGCTCTAAGGTTGATTTGGTAACCATGTTGGAGAAAGCAATTAGTTATGTCAAATTTCTTCAACTACAAGTGAAGATCCTAGCAACAGATGAATTTTGGCCAGTTCAAGGTGGGAAAGCTCCAGATATTTCACAAGTAAAGGAAGCCATTGATGTCATTCTTTCATCTCAAAGAGAAAGAAGCTCAAGCTCAAACACTGAAAAGTGA MSLANSAIQEVDGMEKNGGGYLKSLAIGKGHDQNPNGDFVFRDATNYQLGLQQQQSLINFGHKMNNESLLSFEAQGICQLDLTYNWDDQERVMEDPNCFQTATSHNNYSPSKDHHHNKNGNSGSVYEWLYCESTTDFSDSIQDAEGTQEIVPNHKRSHSTGESSGSVCKKQCTAAPKKQKPKSATAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNTEK Homology
BLAST of Pay0016424 vs. ExPASy Swiss-Prot
Match: Q9FJ00 (Putative transcription factor bHLH086 OS=Arabidopsis thaliana OX=3702 GN=RSL1 PE=1 SV=2) HSP 1 Score: 168.3 bits (425), Expect = 1.2e-40 Identity = 125/268 (46.64%), Postives = 159/268 (59.33%), Query Frame = 0
BLAST of Pay0016424 vs. ExPASy Swiss-Prot
Match: Q9C707 (Transcription factor RHD6 OS=Arabidopsis thaliana OX=3702 GN=RHD6 PE=1 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 1.6e-40 Identity = 102/153 (66.67%), Postives = 120/153 (78.43%), Query Frame = 0
BLAST of Pay0016424 vs. ExPASy Swiss-Prot
Match: Q7XHI9 (Transcription factor bHLH84 OS=Arabidopsis thaliana OX=3702 GN=BHLH84 PE=1 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 9.5e-17 Identity = 43/70 (61.43%), Postives = 57/70 (81.43%), Query Frame = 0
BLAST of Pay0016424 vs. ExPASy Swiss-Prot
Match: Q84WK0 (Transcription factor RSL2 OS=Arabidopsis thaliana OX=3702 GN=RSL2 PE=2 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 1.2e-16 Identity = 43/70 (61.43%), Postives = 57/70 (81.43%), Query Frame = 0
BLAST of Pay0016424 vs. ExPASy Swiss-Prot
Match: Q8LEG1 (Transcription factor RSL3 OS=Arabidopsis thaliana OX=3702 GN=RSL4 PE=1 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 1.2e-16 Identity = 52/110 (47.27%), Postives = 71/110 (64.55%), Query Frame = 0
BLAST of Pay0016424 vs. ExPASy TrEMBL
Match: A0A1S3CCR8 (putative transcription factor bHLH086 OS=Cucumis melo OX=3656 GN=LOC103499318 PE=4 SV=1) HSP 1 Score: 553.9 bits (1426), Expect = 3.9e-154 Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0
BLAST of Pay0016424 vs. ExPASy TrEMBL
Match: A0A5A7V5W7 (Putative transcription factor bHLH086 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G00940 PE=4 SV=1) HSP 1 Score: 550.8 bits (1418), Expect = 3.3e-153 Identity = 281/282 (99.65%), Postives = 281/282 (99.65%), Query Frame = 0
BLAST of Pay0016424 vs. ExPASy TrEMBL
Match: A0A0A0KN55 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G420280 PE=4 SV=1) HSP 1 Score: 526.2 bits (1354), Expect = 8.6e-146 Identity = 271/284 (95.42%), Postives = 279/284 (98.24%), Query Frame = 0
BLAST of Pay0016424 vs. ExPASy TrEMBL
Match: A0A5D3DS91 (Putative transcription factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G002830 PE=4 SV=1) HSP 1 Score: 503.1 bits (1294), Expect = 7.8e-139 Identity = 260/282 (92.20%), Postives = 260/282 (92.20%), Query Frame = 0
BLAST of Pay0016424 vs. ExPASy TrEMBL
Match: A0A6J1JPE9 (putative transcription factor bHLH086 OS=Cucurbita maxima OX=3661 GN=LOC111487700 PE=4 SV=1) HSP 1 Score: 353.2 bits (905), Expect = 1.0e-93 Identity = 216/296 (72.97%), Postives = 234/296 (79.05%), Query Frame = 0
BLAST of Pay0016424 vs. NCBI nr
Match: XP_008460515.1 (PREDICTED: putative transcription factor bHLH086 [Cucumis melo]) HSP 1 Score: 553.9 bits (1426), Expect = 8.0e-154 Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0
BLAST of Pay0016424 vs. NCBI nr
Match: KAA0062337.1 (putative transcription factor bHLH086 [Cucumis melo var. makuwa]) HSP 1 Score: 550.8 bits (1418), Expect = 6.7e-153 Identity = 281/282 (99.65%), Postives = 281/282 (99.65%), Query Frame = 0
BLAST of Pay0016424 vs. NCBI nr
Match: XP_004140364.1 (putative transcription factor bHLH086 isoform X1 [Cucumis sativus] >KGN51045.1 hypothetical protein Csa_008782 [Cucumis sativus]) HSP 1 Score: 526.2 bits (1354), Expect = 1.8e-145 Identity = 271/284 (95.42%), Postives = 279/284 (98.24%), Query Frame = 0
BLAST of Pay0016424 vs. NCBI nr
Match: TYK26637.1 (putative transcription factor [Cucumis melo var. makuwa]) HSP 1 Score: 503.1 bits (1294), Expect = 1.6e-138 Identity = 260/282 (92.20%), Postives = 260/282 (92.20%), Query Frame = 0
BLAST of Pay0016424 vs. NCBI nr
Match: XP_031741132.1 (putative transcription factor bHLH086 isoform X2 [Cucumis sativus]) HSP 1 Score: 475.3 bits (1222), Expect = 3.6e-130 Identity = 249/284 (87.68%), Postives = 257/284 (90.49%), Query Frame = 0
BLAST of Pay0016424 vs. TAIR 10
Match: AT5G37800.1 (RHD SIX-LIKE 1 ) HSP 1 Score: 168.3 bits (425), Expect = 8.8e-42 Identity = 125/268 (46.64%), Postives = 159/268 (59.33%), Query Frame = 0
BLAST of Pay0016424 vs. TAIR 10
Match: AT1G66470.1 (ROOT HAIR DEFECTIVE6 ) HSP 1 Score: 167.9 bits (424), Expect = 1.1e-41 Identity = 102/153 (66.67%), Postives = 120/153 (78.43%), Query Frame = 0
BLAST of Pay0016424 vs. TAIR 10
Match: AT2G14760.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 89.0 bits (219), Expect = 6.8e-18 Identity = 43/70 (61.43%), Postives = 57/70 (81.43%), Query Frame = 0
BLAST of Pay0016424 vs. TAIR 10
Match: AT1G27740.1 (root hair defective 6-like 4 ) HSP 1 Score: 88.6 bits (218), Expect = 8.8e-18 Identity = 52/110 (47.27%), Postives = 71/110 (64.55%), Query Frame = 0
BLAST of Pay0016424 vs. TAIR 10
Match: AT4G33880.1 (ROOT HAIR DEFECTIVE 6-LIKE 2 ) HSP 1 Score: 88.6 bits (218), Expect = 8.8e-18 Identity = 43/70 (61.43%), Postives = 57/70 (81.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|