Pay0015123 (gene) Melon (Payzawat) v1

Overview
NamePay0015123
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionThionin-like protein 2
Locationchr10: 8840158 .. 8840755 (-)
RNA-Seq ExpressionPay0015123
SyntenyPay0015123
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGTCAATTGTTCTAATTCACTTCATTTTGAGCTTAGTTGCTGGAAGATCCACACCTGTACTAGATACGACGAAGTGGTTTGTCAAGTGCATGGCAGAGTGTGCTATCCTACCAATCATTCCCGTTGTTGGCACTTGTGCTGTAAAATGCATGGCTGATTGCATTTCCGTTGCTTCTTCCCCTATGGATTTGAACCGTATGGACACTCATTACTTCTGTAAACTTGGTTGTACCATTTATCGTTGCACCAAACTCAGCACCAAAAAAGACCTTGGTCAGATACTTTGTATATACTTTTTTTTATTACTACTTATTTTAATTATTATACATATATATCTATATGTATACTGTCATTTAGATTTTTTTTCGATTGATTCTTTGACATAACACAATTTTCCTCAAATTTCTAAAGTTAACTTTTTCGTTAGTGACAGTTAAAAATATCAGTCGTATTTATGTTAAATTTTTATCTCATTATTCTAGAGTTTTGATGTATGTTTTTAATTGTGTTTGATTGCTTTTTATGAACTTGGCAGTCGAGAACAAAGTAGAAAGTTGTAGAAACACATGTGATCAAACATGCATGAAAGCTTAA

mRNA sequence

ATGAGGTCAATTGTTCTAATTCACTTCATTTTGAGCTTAGTTGCTGGAAGATCCACACCTGTACTAGATACGACGAAGTGGTTTGTCAAGTGCATGGCAGAGTGTGCTATCCTACCAATCATTCCCGTTGTTGGCACTTGTGCTGTAAAATGCATGGCTGATTGCATTTCCGTTGCTTCTTCCCCTATGGATTTGAACCGTATGGACACTCATTACTTCTGTAAACTTGGTTGTACCATTTATCGTTGCACCAAACTCAGCACCAAAAAAGACCTTGTCGAGAACAAAGTAGAAAGTTGTAGAAACACATGTGATCAAACATGCATGAAAGCTTAA

Coding sequence (CDS)

ATGAGGTCAATTGTTCTAATTCACTTCATTTTGAGCTTAGTTGCTGGAAGATCCACACCTGTACTAGATACGACGAAGTGGTTTGTCAAGTGCATGGCAGAGTGTGCTATCCTACCAATCATTCCCGTTGTTGGCACTTGTGCTGTAAAATGCATGGCTGATTGCATTTCCGTTGCTTCTTCCCCTATGGATTTGAACCGTATGGACACTCATTACTTCTGTAAACTTGGTTGTACCATTTATCGTTGCACCAAACTCAGCACCAAAAAAGACCTTGTCGAGAACAAAGTAGAAAGTTGTAGAAACACATGTGATCAAACATGCATGAAAGCTTAA

Protein sequence

MRSIVLIHFILSLVAGRSTPVLDTTKWFVKCMAECAILPIIPVVGTCAVKCMADCISVASSPMDLNRMDTHYFCKLGCTIYRCTKLSTKKDLVENKVESCRNTCDQTCMKA
Homology
BLAST of Pay0015123 vs. ExPASy Swiss-Prot
Match: A8MRP4 (Thionin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At1g12663 PE=3 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 1.7e-06
Identity = 30/110 (27.27%), Postives = 54/110 (49.09%), Query Frame = 0

Query: 3   SIVLIHFILSLVAGRSTPVLDTTKWFVKCMAECAILPIIPVVGTCAVKCMADCISVASSP 62
           +++++  I +L+A  +   +   + +  C+ EC      P    C   C  +C+   S P
Sbjct: 4   AVMIVMVIGNLLAQTAAQKIPFKECYPACLVECKAGSKFPKYLKCPFTCTKECLQQPSPP 63

Query: 63  -MDLNRMD-THYFCKLGCTIYRCTKLSTKKDLVENKVESCRNTCDQTCMK 111
            +  N +D + YFCKLGC  Y C  LS+ ++    +V +C ++C   C K
Sbjct: 64  SVSSNNIDESDYFCKLGCATYHCVSLSSIQNPNVERVSACVDSCSNKCTK 113

BLAST of Pay0015123 vs. ExPASy TrEMBL
Match: A0A5D3BCH5 (Thionin-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold85G00550 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.7e-52
Identity = 104/111 (93.69%), Postives = 105/111 (94.59%), Query Frame = 0

Query: 1   MRSIVLIHFILSLVAGRSTPVLDTTKWFVKCMAECAILPIIPVVGTCAVKCMADCISVAS 60
           MRSIVLIHFILSLVAGRSTPVLDT KWFVKCMAECAILPIIPVV  CAVKCMADCI VAS
Sbjct: 1   MRSIVLIHFILSLVAGRSTPVLDTAKWFVKCMAECAILPIIPVVSICAVKCMADCIPVAS 60

Query: 61  SPMDLNRMDTHYFCKLGCTIYRCTKLSTKKDLVENKVESCRNTCDQTCMKA 112
           SPMDLNRMDTHYFCKLGCT YRCTKLSTKKDLVENKVE+C NTCDQTCMKA
Sbjct: 61  SPMDLNRMDTHYFCKLGCTTYRCTKLSTKKDLVENKVETCGNTCDQTCMKA 111

BLAST of Pay0015123 vs. ExPASy TrEMBL
Match: A0A6J1KDK0 (thionin-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111494667 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 2.4e-27
Identity = 66/111 (59.46%), Postives = 80/111 (72.07%), Query Frame = 0

Query: 1   MRSIVLIHFILSLVAGRSTPVLDTTKWFVKCMAECAILPIIPVVGTCAVKCMADCISVAS 60
           M+S+V+I FILSLVAGRST      K + KC   CAI P +P +GTC  KC+ADC+ +AS
Sbjct: 36  MKSVVVICFILSLVAGRSTASFG--KCYAKCFIVCAITPGVP-IGTCGGKCLADCLFLAS 95

Query: 61  SPMDLNRMDTHYFCKLGCTIYRCTKLSTKKDLVENKVESCRNTCDQTCMKA 112
           +P DLN +DTHYFCKLGC    CTK STK D  E KVESC N+C +TC+KA
Sbjct: 96  APRDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNSCSRTCLKA 143

BLAST of Pay0015123 vs. ExPASy TrEMBL
Match: A0A0A0KC18 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G446640 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.2e-23
Identity = 62/91 (68.13%), Postives = 68/91 (74.73%), Query Frame = 0

Query: 1  MRSIVLIHFILSLVAGRSTPVLDTTKWFVKCMAECAILPIIPVVGTCAVKCMADCISVAS 60
          M+S+VLI FILSLVAGRST      K + KC   CAI P IP VGTC  KC+ADC+ +AS
Sbjct: 1  MKSVVLICFILSLVAGRSTASFG--KCYAKCFIVCAITPGIP-VGTCGAKCLADCLFIAS 60

Query: 61 SPMDLNRMDTHYFCKLGCTIYRCTKLSTKKD 92
          SPMDLN MDTHYFCKLGC   RCTK STKKD
Sbjct: 61 SPMDLNYMDTHYFCKLGCATSRCTKFSTKKD 88

BLAST of Pay0015123 vs. ExPASy TrEMBL
Match: A0A6J1DDL8 (thionin-like protein 2 OS=Momordica charantia OX=3673 GN=LOC111019402 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 5.4e-19
Identity = 57/110 (51.82%), Postives = 71/110 (64.55%), Query Frame = 0

Query: 4   IVLIHFILSLVAGRSTPVLDTTKWFVKCMAECAILPIIPVVGTCAVKCMADCI-SVASSP 63
           ++L+  +LSLVAG+ST      K + KC   CAI P IP VGTCA KC+ DC+   AS+ 
Sbjct: 6   LILVMLVLSLVAGKSTASFG--KCYAKCFVVCAITPGIP-VGTCAAKCLTDCLFRAASTT 65

Query: 64  MDLN-RMDTHYFCKLGCTIYRCTKLSTKKDLVENKVESCRNTCDQTCMKA 112
            D N ++DT YFCKLGC    CTK STKKD  E KV SC ++C Q C+ A
Sbjct: 66  ADFNDQIDTRYFCKLGCATSLCTKFSTKKDPAEKKVGSCVDSCSQKCINA 112

BLAST of Pay0015123 vs. ExPASy TrEMBL
Match: A0A5B7C7R7 (Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_046429 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 2.2e-12
Identity = 48/112 (42.86%), Postives = 65/112 (58.04%), Query Frame = 0

Query: 1   MRSIVLIHFILSLVAGRSTPVLDTTKWFVKCMAEC---AILPIIPVVGTCAVKCMADCIS 60
           +RS V+I  +L L  G+ST        F KC A+C    ++ I P V  CAVKC+ DCI 
Sbjct: 6   LRSAVMIVLVLGLFVGQSTAS------FKKCYAKCFLFCMINIPPTVLPCAVKCLKDCI- 65

Query: 61  VASSPMDLNRMDTHYFCKLGCTIYRCTKLSTKKDLVENKVESCRNTCDQTCM 110
           +      L + +THYFCKLGC    CT +ST ++  E KVESC  +C +TC+
Sbjct: 66  IPKPTHHLTQENTHYFCKLGCASSLCTNISTIQNPGEEKVESCIGSCSETCI 110

BLAST of Pay0015123 vs. NCBI nr
Match: KAA0037367.1 (thionin-like protein 2 [Cucumis melo var. makuwa] >TYJ97540.1 thionin-like protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 214.9 bits (546), Expect = 3.4e-52
Identity = 104/111 (93.69%), Postives = 105/111 (94.59%), Query Frame = 0

Query: 1   MRSIVLIHFILSLVAGRSTPVLDTTKWFVKCMAECAILPIIPVVGTCAVKCMADCISVAS 60
           MRSIVLIHFILSLVAGRSTPVLDT KWFVKCMAECAILPIIPVV  CAVKCMADCI VAS
Sbjct: 1   MRSIVLIHFILSLVAGRSTPVLDTAKWFVKCMAECAILPIIPVVSICAVKCMADCIPVAS 60

Query: 61  SPMDLNRMDTHYFCKLGCTIYRCTKLSTKKDLVENKVESCRNTCDQTCMKA 112
           SPMDLNRMDTHYFCKLGCT YRCTKLSTKKDLVENKVE+C NTCDQTCMKA
Sbjct: 61  SPMDLNRMDTHYFCKLGCTTYRCTKLSTKKDLVENKVETCGNTCDQTCMKA 111

BLAST of Pay0015123 vs. NCBI nr
Match: XP_004152967.1 (thionin-like protein 2 [Cucumis sativus] >KAE8646463.1 hypothetical protein Csa_015837 [Cucumis sativus])

HSP 1 Score: 150.6 bits (379), Expect = 8.0e-33
Identity = 73/111 (65.77%), Postives = 87/111 (78.38%), Query Frame = 0

Query: 1   MRSIVLIHFILSLVAGRSTPVLDTTKWFVKCMAECAILPIIPVVGTCAVKCMADCISVAS 60
           MRS+VLI FILSLVAG+ST V++ +K ++ CMA CA+   +  VG CA+KC ADCI++AS
Sbjct: 1   MRSVVLICFILSLVAGKSTAVIEVSKCYLNCMAVCAVPSSLLTVGLCALKCTADCIAIAS 60

Query: 61  SPMDLNRMDTHYFCKLGCTIYRCTKLSTKKDLVENKVESCRNTCDQTCMKA 112
           SPM+LNR+DT YFCKLGC    CTK STKKD  E KVESC NTCDQ CMKA
Sbjct: 61  SPMNLNRVDTRYFCKLGCATSCCTKSSTKKDFAEKKVESCVNTCDQICMKA 111

BLAST of Pay0015123 vs. NCBI nr
Match: XP_038899787.1 (thionin-like protein 2 [Benincasa hispida])

HSP 1 Score: 134.8 bits (338), Expect = 4.5e-28
Identity = 66/111 (59.46%), Postives = 79/111 (71.17%), Query Frame = 0

Query: 1   MRSIVLIHFILSLVAGRSTPVLDTTKWFVKCMAECAILPIIPVVGTCAVKCMADCISVAS 60
           M+S++LI FI+SLV GRST      K + KC   CAI P IP +GTC  KC+ DC+ +AS
Sbjct: 1   MKSVILICFIMSLVVGRSTASFG--KCYAKCFVVCAITPGIP-IGTCGAKCLGDCLFIAS 60

Query: 61  SPMDLNRMDTHYFCKLGCTIYRCTKLSTKKDLVENKVESCRNTCDQTCMKA 112
           SP+D N +DTHYFCKLGC    CTK STKKD  E KVESC N+C QTC+KA
Sbjct: 61  SPLDFNHLDTHYFCKLGCATSLCTKFSTKKDPAEKKVESCVNSCGQTCIKA 108

BLAST of Pay0015123 vs. NCBI nr
Match: XP_023000407.1 (thionin-like protein 2 [Cucurbita maxima])

HSP 1 Score: 131.3 bits (329), Expect = 5.0e-27
Identity = 66/111 (59.46%), Postives = 80/111 (72.07%), Query Frame = 0

Query: 1   MRSIVLIHFILSLVAGRSTPVLDTTKWFVKCMAECAILPIIPVVGTCAVKCMADCISVAS 60
           M+S+V+I FILSLVAGRST      K + KC   CAI P +P +GTC  KC+ADC+ +AS
Sbjct: 36  MKSVVVICFILSLVAGRSTASFG--KCYAKCFIVCAITPGVP-IGTCGGKCLADCLFLAS 95

Query: 61  SPMDLNRMDTHYFCKLGCTIYRCTKLSTKKDLVENKVESCRNTCDQTCMKA 112
           +P DLN +DTHYFCKLGC    CTK STK D  E KVESC N+C +TC+KA
Sbjct: 96  APRDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNSCSRTCLKA 143

BLAST of Pay0015123 vs. NCBI nr
Match: KAG6593441.1 (Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 130.6 bits (327), Expect = 8.5e-27
Identity = 67/111 (60.36%), Postives = 79/111 (71.17%), Query Frame = 0

Query: 1   MRSIVLIHFILSLVAGRSTPVLDTTKWFVKCMAECAILPIIPVVGTCAVKCMADCISVAS 60
           M+SIV+I FILSLVAGRST      K + KC   CAI P +P +GTC  KC+ADC+  AS
Sbjct: 1   MKSIVVICFILSLVAGRSTASFG--KCYAKCFIVCAITPGVP-IGTCGGKCLADCLFPAS 60

Query: 61  SPMDLNRMDTHYFCKLGCTIYRCTKLSTKKDLVENKVESCRNTCDQTCMKA 112
           +P DLN +DTHYFCKLGC    CTK STK D  E KVESC N+C +TC+KA
Sbjct: 61  APRDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNSCSRTCLKA 108

BLAST of Pay0015123 vs. TAIR 10
Match: AT1G12663.1 (Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660. )

HSP 1 Score: 53.5 bits (127), Expect = 1.2e-07
Identity = 30/110 (27.27%), Postives = 54/110 (49.09%), Query Frame = 0

Query: 3   SIVLIHFILSLVAGRSTPVLDTTKWFVKCMAECAILPIIPVVGTCAVKCMADCISVASSP 62
           +++++  I +L+A  +   +   + +  C+ EC      P    C   C  +C+   S P
Sbjct: 4   AVMIVMVIGNLLAQTAAQKIPFKECYPACLVECKAGSKFPKYLKCPFTCTKECLQQPSPP 63

Query: 63  -MDLNRMD-THYFCKLGCTIYRCTKLSTKKDLVENKVESCRNTCDQTCMK 111
            +  N +D + YFCKLGC  Y C  LS+ ++    +V +C ++C   C K
Sbjct: 64  SVSSNNIDESDYFCKLGCATYHCVSLSSIQNPNVERVSACVDSCSNKCTK 113

BLAST of Pay0015123 vs. TAIR 10
Match: AT1G12672.2 (unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12663.1). )

HSP 1 Score: 45.1 bits (105), Expect = 4.4e-05
Identity = 21/60 (35.00%), Postives = 32/60 (53.33%), Query Frame = 0

Query: 51  CMADCISVASSPMDLNRMDTH--YFCKLGCTIYRCTKLSTKKDLVENKVESCRNTCDQTC 109
           C+  C+   SS MD      H  Y+CKLGC+ + C  LS+ ++   +KV  C ++C   C
Sbjct: 41  CIKTCLEPPSSQMDSTNEINHNDYYCKLGCSTHHCASLSSIQNPNVDKVVDCVDSCSDKC 100

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A8MRP41.7e-0627.27Thionin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At1g12663 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
A0A5D3BCH51.7e-5293.69Thionin-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold8... [more]
A0A6J1KDK02.4e-2759.46thionin-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111494667 PE=4 SV=1[more]
A0A0A0KC181.2e-2368.13Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G446640 PE=4 SV=1[more]
A0A6J1DDL85.4e-1951.82thionin-like protein 2 OS=Momordica charantia OX=3673 GN=LOC111019402 PE=4 SV=1[more]
A0A5B7C7R72.2e-1242.86Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_046429 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAA0037367.13.4e-5293.69thionin-like protein 2 [Cucumis melo var. makuwa] >TYJ97540.1 thionin-like prote... [more]
XP_004152967.18.0e-3365.77thionin-like protein 2 [Cucumis sativus] >KAE8646463.1 hypothetical protein Csa_... [more]
XP_038899787.14.5e-2859.46thionin-like protein 2 [Benincasa hispida][more]
XP_023000407.15.0e-2759.46thionin-like protein 2 [Cucurbita maxima][more]
KAG6593441.18.5e-2760.36Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. sororia][more]
Match NameE-valueIdentityDescription
AT1G12663.11.2e-0727.27Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant t... [more]
AT1G12672.24.4e-0535.00unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana prot... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038975Thionin-like proteinPANTHERPTHR36312THIONIN-LIKE PROTEIN 1coord: 2..110
NoneNo IPR availablePANTHERPTHR36312:SF1THIONIN-LIKE PROTEIN 1coord: 2..110

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0015123.1Pay0015123.1mRNA