Pay0011533 (gene) Melon (Payzawat) v1

Overview


Name	Pay0011533
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Protein DETOXIFICATION
Location	chr04: 33204622 .. 33204895 (+)
RNA-Seq Expression	Pay0011533
Synteny	Pay0011533

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAAGACGTTGACGACTACTACTACTACCACTAAACATGAACTTAAAATCATGAGTAGTAACAGTCATAGTAATAGTAGCAGCAATAATAGTAACCTTAGTGGTACAATCCCAGGATTCTTTCGCCGCCTTTTACCTCTCCATGCCCTTCCTCATGGTCTCCCTCCACAACAGGTACTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCATATTATTATTAATTATTTCAATTCTTCAATAGGAACCATTACCAAAAGTTGGAAAATTTTAG

mRNA sequence

ATGGGAAAGACGTTGACGACTACTACTACTACCACTAAACATGAACTTAAAATCATGAGTAGTAACAGTCATAGTAATAGTAGCAGCAATAATAGTAACCTTAGTGGTACAATCCCAGGATTCTTTCGCCGCCTTTTACCTCTCCATGCCCTTCCTCATGGTCTCCCTCCACAACAGGAACCATTACCAAAAGTTGGAAAATTTTAG

Coding sequence (CDS)

ATGGGAAAGACGTTGACGACTACTACTACTACCACTAAACATGAACTTAAAATCATGAGTAGTAACAGTCATAGTAATAGTAGCAGCAATAATAGTAACCTTAGTGGTACAATCCCAGGATTCTTTCGCCGCCTTTTACCTCTCCATGCCCTTCCTCATGGTCTCCCTCCACAACAGGAACCATTACCAAAAGTTGGAAAATTTTAG

Protein sequence

MGKTLTTTTTTTKHELKIMSSNSHSNSSSNNSNLSGTIPGFFRRLLPLHALPHGLPPQQEPLPKVGKF

Homology

[Close]

BLAST of Pay0011533 vs. ExPASy TrEMBL
Match: A0A0A0LCM3 (Protein DETOXIFICATION OS=Cucumis sativus OX=3659 GN=Csa_3G728650 PE=3 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 4.2e-22
Identity = 61/70 (87.14%), Postives = 64/70 (91.43%), Query Frame = 0


Query: 1  MGKTLTTTTTTTKHELKIMSSNSHSNSSSNNSNLSGTIPGFFRRLLPLHALPHGLPPQQ- 60
          MGKTLTTTTTTTKHELKIMSSNS+SNSSSNNSNLSGTIPGFFRRLLPLHALPHGLPPQQ 
Sbjct: 1  MGKTLTTTTTTTKHELKIMSSNSNSNSSSNNSNLSGTIPGFFRRLLPLHALPHGLPPQQM 60

Query: 61 -EPLPKVGKF 69
           E L  + +F
Sbjct: 61 KEELKSLARF 70

[Close]

BLAST of Pay0011533 vs. NCBI nr
Match: XP_004137889.2 (protein DETOXIFICATION 53 isoform X1 [Cucumis sativus] >KGN58699.1 hypothetical protein Csa_001442 [Cucumis sativus])

HSP 1 Score: 113.2 bits (282), Expect = 8.7e-22
Identity = 61/70 (87.14%), Postives = 64/70 (91.43%), Query Frame = 0


Query: 1  MGKTLTTTTTTTKHELKIMSSNSHSNSSSNNSNLSGTIPGFFRRLLPLHALPHGLPPQQ- 60
          MGKTLTTTTTTTKHELKIMSSNS+SNSSSNNSNLSGTIPGFFRRLLPLHALPHGLPPQQ 
Sbjct: 1  MGKTLTTTTTTTKHELKIMSSNSNSNSSSNNSNLSGTIPGFFRRLLPLHALPHGLPPQQM 60

Query: 61 -EPLPKVGKF 69
           E L  + +F
Sbjct: 61 KEELKSLARF 70

[Close]

BLAST of Pay0011533 vs. NCBI nr
Match: XP_038904374.1 (protein DETOXIFICATION 53 [Benincasa hispida])

HSP 1 Score: 57.4 bits (137), Expect = 5.6e-05
Identity = 37/61 (60.66%), Postives = 44/61 (72.13%), Query Frame = 0


Query: 10 TTTKHELKIMSSNSHSNSSSNNSNLSGTIPGFFRRLLPLHALPHGLPPQQ--EPLPKVGK 69
          T  K ELK MSS S SNSS++N+    T+ GFFRRLLPLHALP+GLPPQQ  E L  + +
Sbjct: 4  TIAKDELK-MSSTSSSNSSNSNT----TLGGFFRRLLPLHALPNGLPPQQMKEELKSLAR 59

The following BLAST results are available for this feature:

BLAST of Pay0011533 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0011533 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCM3	4.2e-22	87.14	Protein DETOXIFICATION OS=Cucumis sativus OX=3659 GN=Csa_3G728650 PE=3 SV=1	[more]

BLAST of Pay0011533 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137889.2	8.7e-22	87.14	protein DETOXIFICATION 53 isoform X1 [Cucumis sativus] >KGN58699.1 hypothetical ...	[more]
XP_038904374.1	5.6e-05	60.66	protein DETOXIFICATION 53 [Benincasa hispida]	[more]

BLAST of Pay0011533 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0011533.1	Pay0011533.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1990961	xenobiotic detoxification by transmembrane export across the plasma membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0015297	antiporter activity
molecular_function	GO:0042910	xenobiotic transmembrane transporter activity