Pay0008377 (gene) Melon (Payzawat) v1

Overview


Name	Pay0008377
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Unknown protein
Location	chr04: 9027983 .. 9030744 (+)
RNA-Seq Expression	Pay0008377
Synteny	Pay0008377

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATGCTTAAGAAGACATAATTATGCAGCCCTTTTTCATTCTTTCATAGGGGTTGACAGTAGAGACATGACACACCACTTTCCTCTCTTTTTAGAAGCATTTGAAATGGGGCCATCATTCTCTCTTATACCCCATGTCTCTTTGCACCACCTCACCAACCGAGCACAGTTTCAAATATTTATCGGTCAAACACAGTGCAATTGAAAGGGAAAACATGCTTATATATATATCTATATATTATATGTATATTTGTTCTGTTACTCTTCCAGACATACTGGTAATACTGTATAGCACATATATGATCCTCGAACCCTCATTAAACTTTATTAATTTTCAATTTCAATTCCTAACCATGTTAAGAGAACAGAGCAACACTGTTTCTCAACATATTTTCTTAGGTACATTGTTTTTCAACTGCTGAATGAATATGTTCCCCACCATTACCTCTTCTCTATATGTCATATAAATCCCTATCCACTGGTCACTCCATTTTCTCAAGAAAAGAAATGGGAAAAGTTGAAAGAGAGAGAGCGAAAGAGAAACCCACAAAAGAAAAAAAAAGAGGAAGGTTTAATATGCCCTTCTTATAATATATACATGATTTTTATCATAATCTAAAAGAGATACTTTTCTTGCGTACTTGTGGTCAAACAGGTGTTCGTGCTGTAAGGACCCACTGGCTATCCTATCAAGCGACAAGAAGCGATGGGCTGAAAGGTTGAAACCTAAGAAGCCATATTGCTCTTTTGTATTGGATATAAACTTCAAGGTCTAATCACGTCGATGCTTTGAATTTGCTTTTGTAGGAACTAGAAACAAATATTTATATGAATTGCAAGCACTTAGCTTAGCGATGGAAAATCGCTGCTGTGGAATCATAAAACCCTTTCTTGTCATCTTCATGATTTTTAAATCTCTTTTTGGGCCATCATGTCAGGTATTTTTCTTTTTAAATTAATGTTTATCCTTTGCTACATGCTACACCATAATCAAAATGCATGTTATATGCCTGGGCACAAAGTGTTATACATCACTAGCCATCTAATCCTGGCCTCCAAAAGTAGCCGACCAACAGAAACTTAAAAACTCATTTTATTGGTGATAACATGTGATTTGTGGCCTCAATCACAGAAACCCATTGGCTGATTTCCTTTTTCTCTTTTTCTGTCTCTTCCTTTTTTTTTTTAATTTATTTAATATTACGAAGCATCGACAATGACTTGCTAATGGTTTTTTTTCTTACCTAATCAGGAAGTGTTCCTTAGTTGGCCTTCGGTTTGGCCTATGAAGTCATAATTATAGCTCTGACTTTCATTTTATTGTCGTATAGCTCTGACTTCCATTTTTTTATCTATGAAACAGCGTCATAATATTGGTAAAATGTTCCATAATCACATCTAATCCGAACCTCTCTTGAAGAAATATGTAGTGCTTAAAAGTAATGATATCTTATAAAGTAAGAGATAAGATGTTTGATTAATGACACCATTCGTTGGATGAACAAATAGCTGAGTCCAGCTAGAACCCAGTTCTAACTATCTTAGATTCTAAATCCTATTATACTTTTTATTTAAAGAAATTTGATTTTAAATTAGCTTTAATACTAATATTCTGTCATGTTTTTCACTTTTCTTATACTGTAGTCTGATGGGACAATAATTTGTCCTATGAAGTTTTCTAATTTACTAGAGGCTGGATACAATAATTCCCCAGCTTGACTTCTTCTGAATGAAATGAATATTTAGTTAAATGCAGGATGTTCTCACTTTGCTCACAAAAGATGACATTTGGTAAATATGAAATGAAAACAATGCTATAAGAAAAGAATCACTAACAAGCTCGATATTCATTCTGTCTAAAGGAAGTTGATCTTGTGGTAAAAATTAGTGCTTTATGATTTAGATGTTGTTCAGCATTAGTATTTAATCTATGTCAAGCTCTCCTTTAATAAAAAAAATGCATGATTCCATTTTTGACAATGTCTGGAAGCTTTTCTTTTTGTTAGTTCCTCACCATAAACACGTGGATAACCTCTCAAGTCACTGTAACCTTAATGTTAATCATATATCTTTGGGGACAGTTTTGGCATGGGACTGTGCATTTTCACAAAATGTGGTATTACAAATCCGTTATGAAAAGCACACAGTGAAGCTTTTTTTTTTTAGGAAATTGGAAAAGATAAAGTGGACATTTTTTATTTTTAATTTTTCTTAAGAGAAAGATGTGTTCTTTTATAATATATAATATATATAATATATATAATAATAATATAGTTTCTATTTGACTATCTCTTTAAAGGGGGAACTTACTTTCTGCGGCAGCTTTGAGATACAGTTAGCATTTACTTATTTAATGTCAGGTAGTTGGGTTGGGGAGGCAGGCCATAATGCTGTTTATGATCCTTTTGTCGGCGGAAAACATGCATGGAACGAATTACGTGTCGATATGAGGCAAATTAGCTTCATGAAAATTGAAAGAGATGAAAAGAGATTGGTAAGCAGCAGAAATTAATCGAGTATGTGATCAGCCTATTATGATTTTTTTTTCTTTTTTACTGAAAGAAGAATTATGCATGCATTCCAACTTTAAGTTTCTGTTCTTTTGGTTTTAATTGAGATTGAACATTTCTGCAGTTGCATACCAAGTTTGAATTGATTGCATGTCACCGAAAGAATTTCAATTGTTGACTACAGTTTGAATACTTTAGTTTGGCCAGTGTGTTTGAGTTGGATACTTTGGCTTGGCTAGCATATAAGGCCTAA

mRNA sequence

ATATGCTTAAGAAGACATAATTATGCAGCCCTTTTTCATTCTTTCATAGGGGTTGACAGTAGAGACATGACACACCACTTTCCTCTCTTTTTAGAAGCATTTGAAATGGGGCCATCATTCTCTCTTATACCCCATGTCTCTTTGCACCACCTCACCAACCGAGCACAGTTTCAAATATTTATCGGTCAAACACAGTGCAATTGAAAGGGAAAACATGCTTATATATATATCTATATATTATATGTATATTTGTTCTGTTACTCTTCCAGACATACTGGTAATACTGTATAGCACATATATGATCCTCGAACCCTCATTAAACTTTATTAATTTTCAATTTCAATTCCTAACCATGTTAAGAGAACAGAGCAACACTGTTTCTCAACATATTTTCTTAGGTACATTGTTTTTCAACTGCTGAATGAATATGTTCCCCACCATTACCTCTTCTCTATATGTCATATAAATCCCTATCCACTGGTCACTCCATTTTCTCAAGAAAAGAAATGGGAAAAGTTGAAAGAGAGAGAGCGAAAGAGAAACCCACAAAAGAAAAAAAAAGAGGAAGGATGTTCTCACTTTGCTCACAAAAGATGACATTTGGTAGTTGGGTTGGGGAGGCAGGCCATAATGCTGTTTATGATCCTTTTGTCGGCGGAAAACATGCATGGAACGAATTACGTGTCGATATGAGGCAAATTAGCTTCATGAAAATTGAAAGAGATGAAAAGAGATTGTTTGAATACTTTAGTTTGGCCAGTGTGTTTGAGTTGGATACTTTGGCTTGGCTAGCATATAAGGCCTAA

Coding sequence (CDS)

ATGTCATATAAATCCCTATCCACTGGTCACTCCATTTTCTCAAGAAAAGAAATGGGAAAAGTTGAAAGAGAGAGAGCGAAAGAGAAACCCACAAAAGAAAAAAAAAGAGGAAGGATGTTCTCACTTTGCTCACAAAAGATGACATTTGGTAGTTGGGTTGGGGAGGCAGGCCATAATGCTGTTTATGATCCTTTTGTCGGCGGAAAACATGCATGGAACGAATTACGTGTCGATATGAGGCAAATTAGCTTCATGAAAATTGAAAGAGATGAAAAGAGATTGTTTGAATACTTTAGTTTGGCCAGTGTGTTTGAGTTGGATACTTTGGCTTGGCTAGCATATAAGGCCTAA

Protein sequence

MSYKSLSTGHSIFSRKEMGKVERERAKEKPTKEKKRGRMFSLCSQKMTFGSWVGEAGHNAVYDPFVGGKHAWNELRVDMRQISFMKIERDEKRLFEYFSLASVFELDTLAWLAYKA

Homology

[Close]

BLAST of Pay0008377 vs. NCBI nr
Match: KAE8650712.1 (hypothetical protein Csa_009895 [Cucumis sativus])

HSP 1 Score: 85.9 bits (211), Expect = 2.5e-13
Identity = 40/63 (63.49%), Postives = 50/63 (79.37%), Query Frame = 0


Query: 41  SLCSQKMTFGSWVGEAGHNAVYDPFVGGKHAWNELRVDMRQISFMKIERDEKRLFEYFSL 100
           +L +    F   VG+AGHNAV DPFVGGKHAWNELRVDMRQISF+++ERDEKRLF + ++
Sbjct: 164 ALLAWDCAFAQNVGKAGHNAVDDPFVGGKHAWNELRVDMRQISFIEMERDEKRLFLHNNV 223

Query: 101 ASV 104
             +
Sbjct: 224 VKI 226

[Close]

BLAST of Pay0008377 vs. NCBI nr
Match: XP_038896213.1 (uncharacterized protein LOC120084489 [Benincasa hispida])

HSP 1 Score: 67.4 bits (163), Expect = 9.3e-08
Identity = 35/51 (68.63%), Postives = 40/51 (78.43%), Query Frame = 0


Query: 47  MTFGSWVG---EAGHNA--VYDPFVGGKHAWNELRVDMRQISFMKIERDEK 93
           M F S  G   +AGHNA  V DPFVGGKHAWNE+RVDM QISFM++ERDE+
Sbjct: 66  MIFKSLFGPSCQAGHNADDVDDPFVGGKHAWNEVRVDMSQISFMEMERDEE 116

The following BLAST results are available for this feature:

BLAST of Pay0008377 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0008377 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0008377 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650712.1	2.5e-13	63.49	hypothetical protein Csa_009895 [Cucumis sativus]	[more]
XP_038896213.1	9.3e-08	68.63	uncharacterized protein LOC120084489 [Benincasa hispida]	[more]

BLAST of Pay0008377 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..37

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0008377.1	Pay0008377.1	mRNA