Pay0008377 (gene) Melon (Payzawat) v1

Overview
NamePay0008377
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionUnknown protein
Locationchr04: 9027983 .. 9030744 (+)
RNA-Seq ExpressionPay0008377
SyntenyPay0008377
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATATGCTTAAGAAGACATAATTATGCAGCCCTTTTTCATTCTTTCATAGGGGTTGACAGTAGAGACATGACACACCACTTTCCTCTCTTTTTAGAAGCATTTGAAATGGGGCCATCATTCTCTCTTATACCCCATGTCTCTTTGCACCACCTCACCAACCGAGCACAGTTTCAAATATTTATCGGTCAAACACAGTGCAATTGAAAGGGAAAACATGCTTATATATATATCTATATATTATATGTATATTTGTTCTGTTACTCTTCCAGACATACTGGTAATACTGTATAGCACATATATGATCCTCGAACCCTCATTAAACTTTATTAATTTTCAATTTCAATTCCTAACCATGTTAAGAGAACAGAGCAACACTGTTTCTCAACATATTTTCTTAGGTACATTGTTTTTCAACTGCTGAATGAATATGTTCCCCACCATTACCTCTTCTCTATATGTCATATAAATCCCTATCCACTGGTCACTCCATTTTCTCAAGAAAAGAAATGGGAAAAGTTGAAAGAGAGAGAGCGAAAGAGAAACCCACAAAAGAAAAAAAAAGAGGAAGGTTTAATATGCCCTTCTTATAATATATACATGATTTTTATCATAATCTAAAAGAGATACTTTTCTTGCGTACTTGTGGTCAAACAGGTGTTCGTGCTGTAAGGACCCACTGGCTATCCTATCAAGCGACAAGAAGCGATGGGCTGAAAGGTTGAAACCTAAGAAGCCATATTGCTCTTTTGTATTGGATATAAACTTCAAGGTCTAATCACGTCGATGCTTTGAATTTGCTTTTGTAGGAACTAGAAACAAATATTTATATGAATTGCAAGCACTTAGCTTAGCGATGGAAAATCGCTGCTGTGGAATCATAAAACCCTTTCTTGTCATCTTCATGATTTTTAAATCTCTTTTTGGGCCATCATGTCAGGTATTTTTCTTTTTAAATTAATGTTTATCCTTTGCTACATGCTACACCATAATCAAAATGCATGTTATATGCCTGGGCACAAAGTGTTATACATCACTAGCCATCTAATCCTGGCCTCCAAAAGTAGCCGACCAACAGAAACTTAAAAACTCATTTTATTGGTGATAACATGTGATTTGTGGCCTCAATCACAGAAACCCATTGGCTGATTTCCTTTTTCTCTTTTTCTGTCTCTTCCTTTTTTTTTTTAATTTATTTAATATTACGAAGCATCGACAATGACTTGCTAATGGTTTTTTTTCTTACCTAATCAGGAAGTGTTCCTTAGTTGGCCTTCGGTTTGGCCTATGAAGTCATAATTATAGCTCTGACTTTCATTTTATTGTCGTATAGCTCTGACTTCCATTTTTTTATCTATGAAACAGCGTCATAATATTGGTAAAATGTTCCATAATCACATCTAATCCGAACCTCTCTTGAAGAAATATGTAGTGCTTAAAAGTAATGATATCTTATAAAGTAAGAGATAAGATGTTTGATTAATGACACCATTCGTTGGATGAACAAATAGCTGAGTCCAGCTAGAACCCAGTTCTAACTATCTTAGATTCTAAATCCTATTATACTTTTTATTTAAAGAAATTTGATTTTAAATTAGCTTTAATACTAATATTCTGTCATGTTTTTCACTTTTCTTATACTGTAGTCTGATGGGACAATAATTTGTCCTATGAAGTTTTCTAATTTACTAGAGGCTGGATACAATAATTCCCCAGCTTGACTTCTTCTGAATGAAATGAATATTTAGTTAAATGCAGGATGTTCTCACTTTGCTCACAAAAGATGACATTTGGTAAATATGAAATGAAAACAATGCTATAAGAAAAGAATCACTAACAAGCTCGATATTCATTCTGTCTAAAGGAAGTTGATCTTGTGGTAAAAATTAGTGCTTTATGATTTAGATGTTGTTCAGCATTAGTATTTAATCTATGTCAAGCTCTCCTTTAATAAAAAAAATGCATGATTCCATTTTTGACAATGTCTGGAAGCTTTTCTTTTTGTTAGTTCCTCACCATAAACACGTGGATAACCTCTCAAGTCACTGTAACCTTAATGTTAATCATATATCTTTGGGGACAGTTTTGGCATGGGACTGTGCATTTTCACAAAATGTGGTATTACAAATCCGTTATGAAAAGCACACAGTGAAGCTTTTTTTTTTTAGGAAATTGGAAAAGATAAAGTGGACATTTTTTATTTTTAATTTTTCTTAAGAGAAAGATGTGTTCTTTTATAATATATAATATATATAATATATATAATAATAATATAGTTTCTATTTGACTATCTCTTTAAAGGGGGAACTTACTTTCTGCGGCAGCTTTGAGATACAGTTAGCATTTACTTATTTAATGTCAGGTAGTTGGGTTGGGGAGGCAGGCCATAATGCTGTTTATGATCCTTTTGTCGGCGGAAAACATGCATGGAACGAATTACGTGTCGATATGAGGCAAATTAGCTTCATGAAAATTGAAAGAGATGAAAAGAGATTGGTAAGCAGCAGAAATTAATCGAGTATGTGATCAGCCTATTATGATTTTTTTTTCTTTTTTACTGAAAGAAGAATTATGCATGCATTCCAACTTTAAGTTTCTGTTCTTTTGGTTTTAATTGAGATTGAACATTTCTGCAGTTGCATACCAAGTTTGAATTGATTGCATGTCACCGAAAGAATTTCAATTGTTGACTACAGTTTGAATACTTTAGTTTGGCCAGTGTGTTTGAGTTGGATACTTTGGCTTGGCTAGCATATAAGGCCTAA

mRNA sequence

ATATGCTTAAGAAGACATAATTATGCAGCCCTTTTTCATTCTTTCATAGGGGTTGACAGTAGAGACATGACACACCACTTTCCTCTCTTTTTAGAAGCATTTGAAATGGGGCCATCATTCTCTCTTATACCCCATGTCTCTTTGCACCACCTCACCAACCGAGCACAGTTTCAAATATTTATCGGTCAAACACAGTGCAATTGAAAGGGAAAACATGCTTATATATATATCTATATATTATATGTATATTTGTTCTGTTACTCTTCCAGACATACTGGTAATACTGTATAGCACATATATGATCCTCGAACCCTCATTAAACTTTATTAATTTTCAATTTCAATTCCTAACCATGTTAAGAGAACAGAGCAACACTGTTTCTCAACATATTTTCTTAGGTACATTGTTTTTCAACTGCTGAATGAATATGTTCCCCACCATTACCTCTTCTCTATATGTCATATAAATCCCTATCCACTGGTCACTCCATTTTCTCAAGAAAAGAAATGGGAAAAGTTGAAAGAGAGAGAGCGAAAGAGAAACCCACAAAAGAAAAAAAAAGAGGAAGGATGTTCTCACTTTGCTCACAAAAGATGACATTTGGTAGTTGGGTTGGGGAGGCAGGCCATAATGCTGTTTATGATCCTTTTGTCGGCGGAAAACATGCATGGAACGAATTACGTGTCGATATGAGGCAAATTAGCTTCATGAAAATTGAAAGAGATGAAAAGAGATTGTTTGAATACTTTAGTTTGGCCAGTGTGTTTGAGTTGGATACTTTGGCTTGGCTAGCATATAAGGCCTAA

Coding sequence (CDS)

ATGTCATATAAATCCCTATCCACTGGTCACTCCATTTTCTCAAGAAAAGAAATGGGAAAAGTTGAAAGAGAGAGAGCGAAAGAGAAACCCACAAAAGAAAAAAAAAGAGGAAGGATGTTCTCACTTTGCTCACAAAAGATGACATTTGGTAGTTGGGTTGGGGAGGCAGGCCATAATGCTGTTTATGATCCTTTTGTCGGCGGAAAACATGCATGGAACGAATTACGTGTCGATATGAGGCAAATTAGCTTCATGAAAATTGAAAGAGATGAAAAGAGATTGTTTGAATACTTTAGTTTGGCCAGTGTGTTTGAGTTGGATACTTTGGCTTGGCTAGCATATAAGGCCTAA

Protein sequence

MSYKSLSTGHSIFSRKEMGKVERERAKEKPTKEKKRGRMFSLCSQKMTFGSWVGEAGHNAVYDPFVGGKHAWNELRVDMRQISFMKIERDEKRLFEYFSLASVFELDTLAWLAYKA
Homology
[Close]
BLAST of Pay0008377 vs. NCBI nr
Match: KAE8650712.1 (hypothetical protein Csa_009895 [Cucumis sativus])

HSP 1 Score: 85.9 bits (211), Expect = 2.5e-13
Identity = 40/63 (63.49%), Postives = 50/63 (79.37%), Query Frame = 0 

Query: 41  SLCSQKMTFGSWVGEAGHNAVYDPFVGGKHAWNELRVDMRQISFMKIERDEKRLFEYFSL 100
           +L +    F   VG+AGHNAV DPFVGGKHAWNELRVDMRQISF+++ERDEKRLF + ++
Sbjct: 164 ALLAWDCAFAQNVGKAGHNAVDDPFVGGKHAWNELRVDMRQISFIEMERDEKRLFLHNNV 223

Query: 101 ASV 104
             +
Sbjct: 224 VKI 226

[Close]
BLAST of Pay0008377 vs. NCBI nr
Match: XP_038896213.1 (uncharacterized protein LOC120084489 [Benincasa hispida])

HSP 1 Score: 67.4 bits (163), Expect = 9.3e-08
Identity = 35/51 (68.63%), Postives = 40/51 (78.43%), Query Frame = 0 

Query: 47  MTFGSWVG---EAGHNA--VYDPFVGGKHAWNELRVDMRQISFMKIERDEK 93
           M F S  G   +AGHNA  V DPFVGGKHAWNE+RVDM QISFM++ERDE+
Sbjct: 66  MIFKSLFGPSCQAGHNADDVDDPFVGGKHAWNEVRVDMSQISFMEMERDEE 116

The following BLAST results are available for this feature:
BLAST of Pay0008377 vs.
Match NameE-valueIdentityDescription
BLAST of Pay0008377 vs.
Match NameE-valueIdentityDescription
BLAST of Pay0008377 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8650712.12.5e-1363.49hypothetical protein Csa_009895 [Cucumis sativus][more]
XP_038896213.19.3e-0868.63uncharacterized protein LOC120084489 [Benincasa hispida][more]
BLAST of Pay0008377 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..37
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..37

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0008377.1Pay0008377.1mRNA