Pay0005613 (gene) Melon (Payzawat) v1

Overview
NamePay0005613
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE2
Locationchr01: 10676315 .. 10677882 (+)
RNA-Seq ExpressionPay0005613
SyntenyPay0005613
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAACTCTAGCAAAATCAGGTATTTTTAAGCCAAAGGCCTTTCACATCACAATTGCTCTCCCGACTCCCACATCATACACGGAAGCCTCTAAGTATCCTAAATGGTGGACTGCGATGTGTGAGGAATTCAATGCTCTTCAAGCATAAGGTACCTGGTTCCTAGTACCCGGACTTCCATCTATGAATGTTGTTGGCTGTAAATGGGTTTTTCGTACCAAATATAATCTTGATTGCTCAGTTGCTCGTCACAAAGCACGCCTAGTTTCAAAAGGCTATCACCAGGTGCATGGTTTTGATTTTGATGAAACATTTAATCATGTTGTTTAAAAACCTACTATACGCATCATTCTTGCTCTTGCTACTTAATACAATTGGTCCTTAACCCAGTTAGATGTCAAAAATGCCTTTTCATGGTATTCTTCAGGAAACAGTGTACATGGCTCAACCTACTGGCTTCCAAGACAAAACATGTCTCAATCATGTGTGTCTCCTCCACAAGAGTCTTTATGGCCTCAAACAGTCCCCTCGTGCTTGGTTTGAACGATTTACCTCTTATTTATTTACACTAGGATTTGTTGCCTCTAATGCTGATCCTTCTTTATTCATTCGATCAGTTGGATCTTCTCTTACTTACTTACTTTTGTATGTATATGATATCATTGTCACTGGACCTAACTATTTATACATTTCTGTTCTTAAAAATCAATTGGCCCTAGAATTCAAAATATTTGATCTTGGTCCTTTGAAGTATTTTCTTGGTCTCAAAATCCAAACCTCCATTGAGGGCATATTTGTTAATCATGCCAAATTTCTCAATGATCTCCTCCACACATCAGGAATGACCTCTGCCAAATCTTGTATCACACCAATGTCTACTTCTCTCGATCTTTATACAATTGCACCACCATTTAATGATCCATCAATCTATTGCAGACTAGTTGGTTCATTGCAATATCTTACCTTCACTAGTCCTGATATTGCATTCTTCGTAAATCGTGCCAGTCAGTTCATGCATAAACCAACTATCATTCACTTCTCGACAGTCAAATCAACCTCCGGTATTTATTTGGTACTCCAACTTTTGGAATAAATTTTCGCAAAAATTCGTTTCCTCTTCAAACCTTTTGTGACTTTGATTGGGCAGGTGATACATCTGATCAACGTTCCACCTCCGACTTCATCGCCTTTCTCGATTCTAATCCAATATCTTGGTCTTCTAAAAAGCAACCTACCATCTCTCGTTCCTCCACAGAAGCATAATATCGTTCCCTTGCCACTACTACATCCGATCTTACTGGATCTGACAGCTTCTATGTGATCTCCATGTTCCCCTTAAGACATCACCAACATTATGGTGTGACAATGTTTTCGCTATATCTCTGGCTCACAATCCAGTTTTTCATGCTCACACCAAACACATGAAATTTATTATCACTTTGTTCGGGAAAAAGTTCTTCGCAAAGACATCTCAATTTGTTACATCTCTTCCAACAACCAACTTGCTGATATTCTCACAAAGCCACTCCTATCTCCTACATTCCTTCACCTTCAAGACAAACTACTGA

mRNA sequence

ATGCAAACTCTAGCAAAATCAGGTATTTTTAAGCCAAAGGCCTTTCACATCACAATTGCTCTCCCGACTCCCACATCATACACGGAAGCCTCTAAGTATCCTAAATGGTGGACTGCGATGTTTGGATCTTCTCTTACTTACTTACTTTTGTATGTATATGATATCATTGTCACTGGACCTAACTATTTATACATTTCTGTTCTTAAAAATCAATTGGCCCTAGAATTCAAAATATTTGATCTTGGTCCTTTGAAGTATTTTCTTGGTCTCAAAATCCAAACCTCCATTGAGGGCATATTTGTTAATCATGCCAAATTTCTCAATGATCTCCTCCACACATCAGGAATGACCTCTGCCAAATCTTGTATCACACCAATGTCTACTTCTCTCGATCTTTATACAATTGCACCACCATTTAATGATCCATCAATCTATTGCAGACTAGTTGGTTCATTGCAATATCTTACCTTCACTAGTCCTGATATTGCATTCTTCGTAAATCGTGCCAGTGATACATCTGATCAACGTTCCACCTCCGACTTCATCGCCTTTCTCGATTCTAATCCAATATCTTGGTCTTCTAAAAAGCAACCTACCATCTCTCGTTCCTCCACAGAACTTCTATGTGATCTCCATGTTCCCCTTAAGACATCACCAACATTATGGTGTGACAATGTTTTCGCTATATCTCTGGCTCACAATCCAGTTTTTCATGCTCACACCAAACACATGAAATTTATTATCACTTTGTTCGGGAAAAAGTTCTTCGCAAAGACATCTCAATTTGTTACATCTCTTCCAACAACCAACTTGCTGATATTCTCACAAAGCCACTCCTATCTCCTACATTCCTTCACCTTCAAGACAAACTACTGA

Coding sequence (CDS)

ATGCAAACTCTAGCAAAATCAGGTATTTTTAAGCCAAAGGCCTTTCACATCACAATTGCTCTCCCGACTCCCACATCATACACGGAAGCCTCTAAGTATCCTAAATGGTGGACTGCGATGTTTGGATCTTCTCTTACTTACTTACTTTTGTATGTATATGATATCATTGTCACTGGACCTAACTATTTATACATTTCTGTTCTTAAAAATCAATTGGCCCTAGAATTCAAAATATTTGATCTTGGTCCTTTGAAGTATTTTCTTGGTCTCAAAATCCAAACCTCCATTGAGGGCATATTTGTTAATCATGCCAAATTTCTCAATGATCTCCTCCACACATCAGGAATGACCTCTGCCAAATCTTGTATCACACCAATGTCTACTTCTCTCGATCTTTATACAATTGCACCACCATTTAATGATCCATCAATCTATTGCAGACTAGTTGGTTCATTGCAATATCTTACCTTCACTAGTCCTGATATTGCATTCTTCGTAAATCGTGCCAGTGATACATCTGATCAACGTTCCACCTCCGACTTCATCGCCTTTCTCGATTCTAATCCAATATCTTGGTCTTCTAAAAAGCAACCTACCATCTCTCGTTCCTCCACAGAACTTCTATGTGATCTCCATGTTCCCCTTAAGACATCACCAACATTATGGTGTGACAATGTTTTCGCTATATCTCTGGCTCACAATCCAGTTTTTCATGCTCACACCAAACACATGAAATTTATTATCACTTTGTTCGGGAAAAAGTTCTTCGCAAAGACATCTCAATTTGTTACATCTCTTCCAACAACCAACTTGCTGATATTCTCACAAAGCCACTCCTATCTCCTACATTCCTTCACCTTCAAGACAAACTACTGA

Protein sequence

MQTLAKSGIFKPKAFHITIALPTPTSYTEASKYPKWWTAMFGSSLTYLLLYVYDIIVTGPNYLYISVLKNQLALEFKIFDLGPLKYFLGLKIQTSIEGIFVNHAKFLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPSIYCRLVGSLQYLTFTSPDIAFFVNRASDTSDQRSTSDFIAFLDSNPISWSSKKQPTISRSSTELLCDLHVPLKTSPTLWCDNVFAISLAHNPVFHAHTKHMKFIITLFGKKFFAKTSQFVTSLPTTNLLIFSQSHSYLLHSFTFKTNY
Homology
BLAST of Pay0005613 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 3.2e-28
Identity = 89/272 (32.72%), Postives = 127/272 (46.69%), Query Frame = 0

Query: 42   GSSLTYLLLYVYDIIVTGPNYLYISVLKNQLALEFKIFDLGPLKYFLGLKIQTSIEGIFV 101
            G S+ Y+L+YV DI++TG +   +    + L+  F + D   L YFLG++ +    G+ +
Sbjct: 1141 GKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTGLHL 1200

Query: 102  NHAKFLNDLLHTSGMTSAKSCITPMSTS--LDLYTIAPPFNDPSIYCRLVGSLQYLTFTS 161
            +  +++ DLL  + M +AK   TPM+ S  L LY+      DP+ Y  +VGSLQYL FT 
Sbjct: 1201 SQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYS-GTKLTDPTEYRGIVGSLQYLAFTR 1260

Query: 162  PDIAFFVNR-------------------------------------------------AS 221
            PDI++ VNR                                                 A 
Sbjct: 1261 PDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAG 1320

Query: 222  DTSDQRSTSDFIAFLDSNPISWSSKKQPTISRSSTE------------------LLCDLH 245
            D  D  ST+ +I +L  +PISWSSKKQ  + RSSTE                  LL +L 
Sbjct: 1321 DKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELG 1380

BLAST of Pay0005613 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 3.2e-28
Identity = 88/272 (32.35%), Postives = 130/272 (47.79%), Query Frame = 0

Query: 42   GSSLTYLLLYVYDIIVTGPNYLYISVLKNQLALEFKIFDLGPLKYFLGLKIQTSIEGIFV 101
            G S+ Y+L+YV DI++TG + + +    + L+  F + +   L YFLG++ +   +G+ +
Sbjct: 1124 GRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHL 1183

Query: 102  NHAKFLNDLLHTSGMTSAKSCITPMSTS--LDLYTIAPPFNDPSIYCRLVGSLQYLTFTS 161
            +  ++  DLL  + M +AK   TPM+TS  L L++      DP+ Y  +VGSLQYL FT 
Sbjct: 1184 SQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHS-GTKLPDPTEYRGIVGSLQYLAFTR 1243

Query: 162  PDIAFFVNR-------------------------------------------------AS 221
            PD+++ VNR                                                 A 
Sbjct: 1244 PDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAG 1303

Query: 222  DTSDQRSTSDFIAFLDSNPISWSSKKQPTISRSSTE------------------LLCDLH 245
            DT D  ST+ +I +L  +PISWSSKKQ  + RSSTE                  LL +L 
Sbjct: 1304 DTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELG 1363

BLAST of Pay0005613 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.5e-25
Identity = 74/209 (35.41%), Postives = 106/209 (50.72%), Query Frame = 0

Query: 47  YLLLYVYDIIVTGPNYLYISVLKNQLALEFKIFDLGPLKYFLGLKIQTSIEGIFVNHAKF 106
           YLLLYV DI++TG +   +++L  QL+  F + DLGP+ YFLG++I+T   G+F++  K+
Sbjct: 2   YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKY 61

Query: 107 LNDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPSIYCRLVGSLQYLTFTSPDIAFFV 166
              +L+ +GM   K   TP+   L+       + DPS +  +VG+LQYLT T PDI++ V
Sbjct: 62  AEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAV 121

Query: 167 N-------------------------------------------------RASDTSDQRS 207
           N                                                  A  TS +RS
Sbjct: 122 NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRS 181

BLAST of Pay0005613 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.8e-10
Identity = 69/273 (25.27%), Postives = 113/273 (41.39%), Query Frame = 0

Query: 48   LLLYVYDIIVTGPNYLYISVLKNQLALEFKIFDLGPLKYFLGLKI--QTSIEGIFVNHAK 107
            LLLYV D+++ G +   I+ LK  L+  F + DLGP +  LG+KI  + +   ++++  K
Sbjct: 1005 LLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEK 1064

Query: 108  FLNDLLHTSGMTSAKSCITPMSTSLDL------YTIAPPFNDPSI-YCRLVGSLQY-LTF 167
            ++  +L    M +AK   TP++  L L       T+    N   + Y   VGSL Y +  
Sbjct: 1065 YIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVC 1124

Query: 168  TSPDIAFFV------------------------------------------------NRA 227
            T PDIA  V                                                + A
Sbjct: 1125 TRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPILKGYTDADMA 1184

Query: 228  SDTSDQRSTSDFIAFLDSNPISWSSKKQPTISRSSTE------------------LLCDL 245
             D  +++S++ ++       ISW SK Q  ++ S+TE                   L +L
Sbjct: 1185 GDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQEL 1244

BLAST of Pay0005613 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 57.8 bits (138), Expect = 2.4e-07
Identity = 35/134 (26.12%), Postives = 73/134 (54.48%), Query Frame = 0

Query: 47   YLLLYVYDIIVTGPNYLYISVLKNQLALEFKIFDLGPLKYFLGLKIQTSIEGIFVNHAKF 106
            Y+LLYV D+++   +   ++  K  L  +F++ DL  +K+F+G++I+   + I+++ + +
Sbjct: 1083 YVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAY 1142

Query: 107  LNDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPSIYCR-LVGSLQYLTF-TSPDIAF 166
            +  +L    M +  +  TP+ + ++ Y +     D +  CR L+G L Y+   T PD+  
Sbjct: 1143 VKKILSKFNMENCNAVSTPLPSKIN-YELLNSDEDCNTPCRSLIGCLMYIMLCTRPDLTT 1202

Query: 167  FVNRASDTSDQRST 179
             VN  S  S + ++
Sbjct: 1203 AVNILSRYSSKNNS 1215

BLAST of Pay0005613 vs. ExPASy TrEMBL
Match: A0A1S4DZJ0 (uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=LOC107991247 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 8.4e-104
Identity = 214/311 (68.81%), Postives = 231/311 (74.28%), Query Frame = 0

Query: 1   MQTLAKSGIFKPKAFHITIALPTPTSYTEASKYPKWWTAMFGSSLTYLLLYVYDIIVTGP 60
           MQT AKSGIFKP AFHIT ALPTPTSYTEASKYP+W T M       +L    DIIVTGP
Sbjct: 1   MQTRAKSGIFKPNAFHITTALPTPTSYTEASKYPEWRTTMHEE--FNVLQAQDDIIVTGP 60

Query: 61  NYLYISVLKNQLALEFKIFDLGPLKYFLGLKIQTSIEGIFVNHAKFLNDLLHTSGMTSAK 120
            Y YIS+LKNQLALEFKI DL PLKYFLGL+IQ+SI+GIFVN AK+LNDLLHTSGMTS K
Sbjct: 61  VYSYISLLKNQLALEFKISDLSPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSTK 120

Query: 121 SCITPMSTSLDLYTIAPPFNDPSIYCRLVGSLQYLTFTSPDIAFFVNRASDTSDQRSTSD 180
           SCITPMSTSLDLYTIAPPFNDPS+YCRLVGSLQYLTFT PDI F VNR     D    + 
Sbjct: 121 SCITPMSTSLDLYTIAPPFNDPSLYCRLVGSLQYLTFTRPDIIFSVNRVIHLIDV-PPAG 180

Query: 181 FIAFLDSNPISWSSKKQPTISRSSTE------------------LLCDLHVPLKTSPTLW 240
           FIAFLDSNPISWSSKKQ T+S SSTE                  LLCDLHVPLKTSPTLW
Sbjct: 181 FIAFLDSNPISWSSKKQSTVSHSSTEVEYRSLATTTSDLYWIRQLLCDLHVPLKTSPTLW 240

Query: 241 CDNVFAISLAHNPVFHAHTKHMKFIITLFGKKFFAKTSQFVTSLPTTNLL--IFSQSHSY 292
           CDNV AISL HNP+FHA TKH++       KK   K    +  + + N L  IFS SHSY
Sbjct: 241 CDNVSAISLTHNPIFHARTKHIEIDYHFVRKKVLRKDIS-IRYISSNNELVDIFSPSHSY 300

BLAST of Pay0005613 vs. ExPASy TrEMBL
Match: A0A5D3DUH6 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1920G00270 PE=4 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 1.6e-102
Identity = 217/324 (66.98%), Postives = 229/324 (70.68%), Query Frame = 0

Query: 34  PKWWTAMFGSSLTYLLLYVYDIIVTGPNYLYISVLKNQLALEFKIFDLGPLKYFLGLKIQ 93
           P  +    GSSLTYLLLYV +IIV GP+YLYI VLKNQLALEFKI DLGPLKYFLGL+IQ
Sbjct: 113 PSLFIRSVGSSLTYLLLYVGNIIVAGPDYLYIFVLKNQLALEFKISDLGPLKYFLGLEIQ 172

Query: 94  TSIEGIFVNHAKFLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPSIYCRLVGSLQ 153
           +SI+GIFVN AK+LNDLLHTS MTSAK CITPMSTSLD YTIAPPFNDPS+Y RLVGSLQ
Sbjct: 173 SSIDGIFVNQAKYLNDLLHTSRMTSAKCCITPMSTSLDPYTIAPPFNDPSLYRRLVGSLQ 232

Query: 154 YLTFTSPDIAFFVNR--------------------------------------------- 213
           YLTFT PDIAF +NR                                             
Sbjct: 233 YLTFTRPDIAFSINRVSQFMHKPTVIHFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFCD 292

Query: 214 ---ASDTSDQRSTSDFIAFLDSNPISWSSKKQPTISRSSTE------------------L 273
              A DTSDQRSTS FIAFL SNPISWSSKKQ T+SRSSTE                  L
Sbjct: 293 SEWAGDTSDQRSTSSFIAFLGSNPISWSSKKQSTVSRSSTEAEYRFLATTTADLYWIRQL 352

Query: 274 LCDLHVPLKTSPTLWCDNVFAISLAHNPVFHAHTKHMKFIITLFGKKFFAKTSQFVTSLP 292
           LCDLHVPLKTSPTLWCDNV AISLAHN VFHA T  +K IITLFGKKFFAKTS  VTSLP
Sbjct: 353 LCDLHVPLKTSPTLWCDNVSAISLAHNRVFHARTT-LKLIITLFGKKFFAKTSPSVTSLP 412

BLAST of Pay0005613 vs. ExPASy TrEMBL
Match: A0A5D3CD24 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G00160 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 7.1e-87
Identity = 191/317 (60.25%), Postives = 212/317 (66.88%), Query Frame = 0

Query: 1   MQTLAKSGIFKPKA------FHITIALPTPTSYTEASKYPKWWTAMFGSSLTYLLLYVYD 60
           +Q +  S  FK KA      +H         +++   K P       G  L     Y  D
Sbjct: 26  LQCMRNSMFFKHKAQLVAKGYHQVQGFDFDETFSPVVKKP-----TIGIILALTAQYFDD 85

Query: 61  IIVTGPNYLYISVLKNQLALEFKIFDLGPLKYFLGLKIQTSIEGIFVNHAKFLNDLLHTS 120
           IIVTGP Y YIS+LKNQLALEFKI DL PLKYFLGL+IQ+SI+GIFVN AK+LNDLLHTS
Sbjct: 86  IIVTGPVYSYISLLKNQLALEFKISDLSPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTS 145

Query: 121 GMTSAKSCITPMSTSLDLYTIAPPFNDPSIYCRLVGSLQYLTFTSPDIAFFVNRASDTSD 180
           GMTS KSCITPMSTSLDLYTIAPPFNDPS+YCRLVGSLQYLTFT PDI F VNR     D
Sbjct: 146 GMTSTKSCITPMSTSLDLYTIAPPFNDPSLYCRLVGSLQYLTFTRPDIIFSVNRVIHLID 205

Query: 181 QRSTSDFIAFLDSNPISWSSKKQPTISRSSTE------------------LLCDLHVPLK 240
               + FIAFLDSNPISWSSKKQ T+S SSTE                  LLCDLHVPLK
Sbjct: 206 V-PPAGFIAFLDSNPISWSSKKQSTVSHSSTEVEYRSLATTTSDLYWIRQLLCDLHVPLK 265

Query: 241 TSPTLWCDNVFAISLAHNPVFHAHTKHMKFIITLFGKKFFAKTSQFVTSLPTTNLL--IF 292
           TSPTLWCDNV AISL HNP+FHA TKH++       KK   K    +  + + N L  IF
Sbjct: 266 TSPTLWCDNVSAISLTHNPIFHARTKHIEIDYHFVRKKVLRKDIS-IRYISSNNELVDIF 325

BLAST of Pay0005613 vs. ExPASy TrEMBL
Match: A0A5D3BEU0 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold690G00250 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 7.4e-84
Identity = 182/284 (64.08%), Postives = 198/284 (69.72%), Query Frame = 0

Query: 34  PKWWTAMFGSSLTYLLLYVYDIIVTGPNYLYISVLKNQLALEFKIFDLGPLKYFLGLKIQ 93
           P  +    GS LTYLLLYVYDIIVTGPNYLYISVLKNQLALEFKI D GPLKYFLGL+IQ
Sbjct: 355 PSLFIRSVGSPLTYLLLYVYDIIVTGPNYLYISVLKNQLALEFKISDFGPLKYFLGLEIQ 414

Query: 94  TSIEGIFVNHAKFLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPSIYCRLVGSLQ 153
           +SI+GIFVN AK+LNDLLHTS MTSAKSCIT MSTSLDLYTI PPFNDPS+Y RLVGSLQ
Sbjct: 415 SSIDGIFVNQAKYLNDLLHTSRMTSAKSCITLMSTSLDLYTITPPFNDPSLYRRLVGSLQ 474

Query: 154 YLTFTSPDIAFFVNRASDTSDQRSTSDFIA------FLDSNPISWSS--KKQPTISRSST 213
           Y TFT P+IAF VNR S    + +   F A      +L   P       K+Q T+SRSST
Sbjct: 475 YFTFTHPNIAFSVNRVSQFMHKSTVIHFSAVKRILRYLHGTPTLGIKFRKEQSTVSRSST 534

Query: 214 E------------------LLCDLHVPLKTSPTLWCDNVFAISLAHNPVFHAHTKHMKFI 273
           E                  LLCDLHVPLKTSPTLWC NV AISLAHNPVF A TKH++  
Sbjct: 535 EAKYRSLATTTADLYWIRQLLCDLHVPLKTSPTLWCGNVSAISLAHNPVFRARTKHIEID 594

Query: 274 ITLFGKKFFAKTSQFVTSLPTTNLLIFSQSHSYLLHSFTFKTNY 292
                +K   K         TTNLLIFSQSH YLLHSFTF+TNY
Sbjct: 595 YHFVREKVLRKDISIRYISSTTNLLIFSQSHFYLLHSFTFETNY 638

BLAST of Pay0005613 vs. ExPASy TrEMBL
Match: A0A5A7UTE5 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold486G00610 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 7.4e-84
Identity = 182/284 (64.08%), Postives = 198/284 (69.72%), Query Frame = 0

Query: 34  PKWWTAMFGSSLTYLLLYVYDIIVTGPNYLYISVLKNQLALEFKIFDLGPLKYFLGLKIQ 93
           P  +    GS LTYLLLYVYDIIVTGPNYLYISVLKNQLALEFKI D GPLKYFLGL+IQ
Sbjct: 355 PSLFIRSVGSPLTYLLLYVYDIIVTGPNYLYISVLKNQLALEFKISDFGPLKYFLGLEIQ 414

Query: 94  TSIEGIFVNHAKFLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPSIYCRLVGSLQ 153
           +SI+GIFVN AK+LNDLLHTS MTSAKSCIT MSTSLDLYTI PPFNDPS+Y RLVGSLQ
Sbjct: 415 SSIDGIFVNQAKYLNDLLHTSRMTSAKSCITLMSTSLDLYTITPPFNDPSLYRRLVGSLQ 474

Query: 154 YLTFTSPDIAFFVNRASDTSDQRSTSDFIA------FLDSNPISWSS--KKQPTISRSST 213
           Y TFT P+IAF VNR S    + +   F A      +L   P       K+Q T+SRSST
Sbjct: 475 YFTFTHPNIAFSVNRVSQFMHKSTVIHFSAVKRILRYLHGTPTLGIKFRKEQSTVSRSST 534

Query: 214 E------------------LLCDLHVPLKTSPTLWCDNVFAISLAHNPVFHAHTKHMKFI 273
           E                  LLCDLHVPLKTSPTLWC NV AISLAHNPVF A TKH++  
Sbjct: 535 EAKYRSLATTTADLYWIRQLLCDLHVPLKTSPTLWCGNVSAISLAHNPVFRARTKHIEID 594

Query: 274 ITLFGKKFFAKTSQFVTSLPTTNLLIFSQSHSYLLHSFTFKTNY 292
                +K   K         TTNLLIFSQSH YLLHSFTF+TNY
Sbjct: 595 YHFVREKVLRKDISIRYISSTTNLLIFSQSHFYLLHSFTFETNY 638

BLAST of Pay0005613 vs. NCBI nr
Match: XP_016901398.1 (PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo])

HSP 1 Score: 386.7 bits (992), Expect = 1.7e-103
Identity = 214/311 (68.81%), Postives = 231/311 (74.28%), Query Frame = 0

Query: 1   MQTLAKSGIFKPKAFHITIALPTPTSYTEASKYPKWWTAMFGSSLTYLLLYVYDIIVTGP 60
           MQT AKSGIFKP AFHIT ALPTPTSYTEASKYP+W T M       +L    DIIVTGP
Sbjct: 1   MQTRAKSGIFKPNAFHITTALPTPTSYTEASKYPEWRTTMHEE--FNVLQAQDDIIVTGP 60

Query: 61  NYLYISVLKNQLALEFKIFDLGPLKYFLGLKIQTSIEGIFVNHAKFLNDLLHTSGMTSAK 120
            Y YIS+LKNQLALEFKI DL PLKYFLGL+IQ+SI+GIFVN AK+LNDLLHTSGMTS K
Sbjct: 61  VYSYISLLKNQLALEFKISDLSPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSTK 120

Query: 121 SCITPMSTSLDLYTIAPPFNDPSIYCRLVGSLQYLTFTSPDIAFFVNRASDTSDQRSTSD 180
           SCITPMSTSLDLYTIAPPFNDPS+YCRLVGSLQYLTFT PDI F VNR     D    + 
Sbjct: 121 SCITPMSTSLDLYTIAPPFNDPSLYCRLVGSLQYLTFTRPDIIFSVNRVIHLIDV-PPAG 180

Query: 181 FIAFLDSNPISWSSKKQPTISRSSTE------------------LLCDLHVPLKTSPTLW 240
           FIAFLDSNPISWSSKKQ T+S SSTE                  LLCDLHVPLKTSPTLW
Sbjct: 181 FIAFLDSNPISWSSKKQSTVSHSSTEVEYRSLATTTSDLYWIRQLLCDLHVPLKTSPTLW 240

Query: 241 CDNVFAISLAHNPVFHAHTKHMKFIITLFGKKFFAKTSQFVTSLPTTNLL--IFSQSHSY 292
           CDNV AISL HNP+FHA TKH++       KK   K    +  + + N L  IFS SHSY
Sbjct: 241 CDNVSAISLTHNPIFHARTKHIEIDYHFVRKKVLRKDIS-IRYISSNNELVDIFSPSHSY 300

BLAST of Pay0005613 vs. NCBI nr
Match: KAA0057165.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK27148.1 putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 382.5 bits (981), Expect = 3.3e-102
Identity = 217/324 (66.98%), Postives = 229/324 (70.68%), Query Frame = 0

Query: 34  PKWWTAMFGSSLTYLLLYVYDIIVTGPNYLYISVLKNQLALEFKIFDLGPLKYFLGLKIQ 93
           P  +    GSSLTYLLLYV +IIV GP+YLYI VLKNQLALEFKI DLGPLKYFLGL+IQ
Sbjct: 113 PSLFIRSVGSSLTYLLLYVGNIIVAGPDYLYIFVLKNQLALEFKISDLGPLKYFLGLEIQ 172

Query: 94  TSIEGIFVNHAKFLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPSIYCRLVGSLQ 153
           +SI+GIFVN AK+LNDLLHTS MTSAK CITPMSTSLD YTIAPPFNDPS+Y RLVGSLQ
Sbjct: 173 SSIDGIFVNQAKYLNDLLHTSRMTSAKCCITPMSTSLDPYTIAPPFNDPSLYRRLVGSLQ 232

Query: 154 YLTFTSPDIAFFVNR--------------------------------------------- 213
           YLTFT PDIAF +NR                                             
Sbjct: 233 YLTFTRPDIAFSINRVSQFMHKPTVIHFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFCD 292

Query: 214 ---ASDTSDQRSTSDFIAFLDSNPISWSSKKQPTISRSSTE------------------L 273
              A DTSDQRSTS FIAFL SNPISWSSKKQ T+SRSSTE                  L
Sbjct: 293 SEWAGDTSDQRSTSSFIAFLGSNPISWSSKKQSTVSRSSTEAEYRFLATTTADLYWIRQL 352

Query: 274 LCDLHVPLKTSPTLWCDNVFAISLAHNPVFHAHTKHMKFIITLFGKKFFAKTSQFVTSLP 292
           LCDLHVPLKTSPTLWCDNV AISLAHN VFHA T  +K IITLFGKKFFAKTS  VTSLP
Sbjct: 353 LCDLHVPLKTSPTLWCDNVSAISLAHNRVFHARTT-LKLIITLFGKKFFAKTSPSVTSLP 412

BLAST of Pay0005613 vs. NCBI nr
Match: KAA0047586.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK08246.1 putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 330.5 bits (846), Expect = 1.5e-86
Identity = 191/317 (60.25%), Postives = 212/317 (66.88%), Query Frame = 0

Query: 1   MQTLAKSGIFKPKA------FHITIALPTPTSYTEASKYPKWWTAMFGSSLTYLLLYVYD 60
           +Q +  S  FK KA      +H         +++   K P       G  L     Y  D
Sbjct: 26  LQCMRNSMFFKHKAQLVAKGYHQVQGFDFDETFSPVVKKP-----TIGIILALTAQYFDD 85

Query: 61  IIVTGPNYLYISVLKNQLALEFKIFDLGPLKYFLGLKIQTSIEGIFVNHAKFLNDLLHTS 120
           IIVTGP Y YIS+LKNQLALEFKI DL PLKYFLGL+IQ+SI+GIFVN AK+LNDLLHTS
Sbjct: 86  IIVTGPVYSYISLLKNQLALEFKISDLSPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTS 145

Query: 121 GMTSAKSCITPMSTSLDLYTIAPPFNDPSIYCRLVGSLQYLTFTSPDIAFFVNRASDTSD 180
           GMTS KSCITPMSTSLDLYTIAPPFNDPS+YCRLVGSLQYLTFT PDI F VNR     D
Sbjct: 146 GMTSTKSCITPMSTSLDLYTIAPPFNDPSLYCRLVGSLQYLTFTRPDIIFSVNRVIHLID 205

Query: 181 QRSTSDFIAFLDSNPISWSSKKQPTISRSSTE------------------LLCDLHVPLK 240
               + FIAFLDSNPISWSSKKQ T+S SSTE                  LLCDLHVPLK
Sbjct: 206 V-PPAGFIAFLDSNPISWSSKKQSTVSHSSTEVEYRSLATTTSDLYWIRQLLCDLHVPLK 265

Query: 241 TSPTLWCDNVFAISLAHNPVFHAHTKHMKFIITLFGKKFFAKTSQFVTSLPTTNLL--IF 292
           TSPTLWCDNV AISL HNP+FHA TKH++       KK   K    +  + + N L  IF
Sbjct: 266 TSPTLWCDNVSAISLTHNPIFHARTKHIEIDYHFVRKKVLRKDIS-IRYISSNNELVDIF 325

BLAST of Pay0005613 vs. NCBI nr
Match: TYJ97594.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 320.5 bits (820), Expect = 1.5e-83
Identity = 182/284 (64.08%), Postives = 198/284 (69.72%), Query Frame = 0

Query: 34  PKWWTAMFGSSLTYLLLYVYDIIVTGPNYLYISVLKNQLALEFKIFDLGPLKYFLGLKIQ 93
           P  +    GS LTYLLLYVYDIIVTGPNYLYISVLKNQLALEFKI D GPLKYFLGL+IQ
Sbjct: 355 PSLFIRSVGSPLTYLLLYVYDIIVTGPNYLYISVLKNQLALEFKISDFGPLKYFLGLEIQ 414

Query: 94  TSIEGIFVNHAKFLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPSIYCRLVGSLQ 153
           +SI+GIFVN AK+LNDLLHTS MTSAKSCIT MSTSLDLYTI PPFNDPS+Y RLVGSLQ
Sbjct: 415 SSIDGIFVNQAKYLNDLLHTSRMTSAKSCITLMSTSLDLYTITPPFNDPSLYRRLVGSLQ 474

Query: 154 YLTFTSPDIAFFVNRASDTSDQRSTSDFIA------FLDSNPISWSS--KKQPTISRSST 213
           Y TFT P+IAF VNR S    + +   F A      +L   P       K+Q T+SRSST
Sbjct: 475 YFTFTHPNIAFSVNRVSQFMHKSTVIHFSAVKRILRYLHGTPTLGIKFRKEQSTVSRSST 534

Query: 214 E------------------LLCDLHVPLKTSPTLWCDNVFAISLAHNPVFHAHTKHMKFI 273
           E                  LLCDLHVPLKTSPTLWC NV AISLAHNPVF A TKH++  
Sbjct: 535 EAKYRSLATTTADLYWIRQLLCDLHVPLKTSPTLWCGNVSAISLAHNPVFRARTKHIEID 594

Query: 274 ITLFGKKFFAKTSQFVTSLPTTNLLIFSQSHSYLLHSFTFKTNY 292
                +K   K         TTNLLIFSQSH YLLHSFTF+TNY
Sbjct: 595 YHFVREKVLRKDISIRYISSTTNLLIFSQSHFYLLHSFTFETNY 638

BLAST of Pay0005613 vs. NCBI nr
Match: KAA0056771.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 320.5 bits (820), Expect = 1.5e-83
Identity = 182/284 (64.08%), Postives = 198/284 (69.72%), Query Frame = 0

Query: 34  PKWWTAMFGSSLTYLLLYVYDIIVTGPNYLYISVLKNQLALEFKIFDLGPLKYFLGLKIQ 93
           P  +    GS LTYLLLYVYDIIVTGPNYLYISVLKNQLALEFKI D GPLKYFLGL+IQ
Sbjct: 355 PSLFIRSVGSPLTYLLLYVYDIIVTGPNYLYISVLKNQLALEFKISDFGPLKYFLGLEIQ 414

Query: 94  TSIEGIFVNHAKFLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPSIYCRLVGSLQ 153
           +SI+GIFVN AK+LNDLLHTS MTSAKSCIT MSTSLDLYTI PPFNDPS+Y RLVGSLQ
Sbjct: 415 SSIDGIFVNQAKYLNDLLHTSRMTSAKSCITLMSTSLDLYTITPPFNDPSLYRRLVGSLQ 474

Query: 154 YLTFTSPDIAFFVNRASDTSDQRSTSDFIA------FLDSNPISWSS--KKQPTISRSST 213
           Y TFT P+IAF VNR S    + +   F A      +L   P       K+Q T+SRSST
Sbjct: 475 YFTFTHPNIAFSVNRVSQFMHKSTVIHFSAVKRILRYLHGTPTLGIKFRKEQSTVSRSST 534

Query: 214 E------------------LLCDLHVPLKTSPTLWCDNVFAISLAHNPVFHAHTKHMKFI 273
           E                  LLCDLHVPLKTSPTLWC NV AISLAHNPVF A TKH++  
Sbjct: 535 EAKYRSLATTTADLYWIRQLLCDLHVPLKTSPTLWCGNVSAISLAHNPVFRARTKHIEID 594

Query: 274 ITLFGKKFFAKTSQFVTSLPTTNLLIFSQSHSYLLHSFTFKTNY 292
                +K   K         TTNLLIFSQSH YLLHSFTF+TNY
Sbjct: 595 YHFVREKVLRKDISIRYISSTTNLLIFSQSHFYLLHSFTFETNY 638

BLAST of Pay0005613 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 118.2 bits (295), Expect = 1.1e-26
Identity = 74/209 (35.41%), Postives = 106/209 (50.72%), Query Frame = 0

Query: 47  YLLLYVYDIIVTGPNYLYISVLKNQLALEFKIFDLGPLKYFLGLKIQTSIEGIFVNHAKF 106
           YLLLYV DI++TG +   +++L  QL+  F + DLGP+ YFLG++I+T   G+F++  K+
Sbjct: 2   YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKY 61

Query: 107 LNDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPSIYCRLVGSLQYLTFTSPDIAFFV 166
              +L+ +GM   K   TP+   L+       + DPS +  +VG+LQYLT T PDI++ V
Sbjct: 62  AEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAV 121

Query: 167 N-------------------------------------------------RASDTSDQRS 207
           N                                                  A  TS +RS
Sbjct: 122 NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRS 181

BLAST of Pay0005613 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 117.1 bits (292), Expect = 2.4e-26
Identity = 87/266 (32.71%), Postives = 116/266 (43.61%), Query Frame = 0

Query: 48  LLLYVYDIIVTGPNYLYISVLKNQLALEFKIFDLGPLKYFLGLKIQTSIEGIFVNHAKFL 107
           +L+YV DII+   N   +  LK+QL   FK+ DLGPLKYFLGL+I  S  GI +   K+ 
Sbjct: 280 VLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYA 339

Query: 108 NDLLHTSGMTSAKSCITPMSTSLDLYT-IAPPFNDPSIYCRLVGSLQYLTFTSPDIAFFV 167
            DLL  +G+   K    PM  S+         F D   Y RL+G L YL  T  DI+F V
Sbjct: 340 LDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAV 399

Query: 168 NRASDTSD-------------------------------------------------QRS 227
           N+ S  S+                                                 +RS
Sbjct: 400 NKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRS 459

Query: 228 TSDFIAFLDSNPISWSSKKQPTISRSSTE------------------LLCDLHVPLKTSP 246
           T+ +  FL ++ ISW SKKQ  +S+SS E                     +L +PL    
Sbjct: 460 TNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPT 519

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q94HW23.2e-2832.72Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Q9ZT943.2e-2832.35Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
P925191.5e-2535.41Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ... [more]
P109781.8e-1025.27Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P041462.4e-0726.12Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
Match NameE-valueIdentityDescription
A0A1S4DZJ08.4e-10468.81uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=... [more]
A0A5D3DUH61.6e-10266.98Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A5D3CD247.1e-8760.25Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A5D3BEU07.4e-8464.08Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A5A7UTE57.4e-8464.08Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... [more]
Match NameE-valueIdentityDescription
XP_016901398.11.7e-10368.81PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo][more]
KAA0057165.13.3e-10266.98putative mitochondrial protein [Cucumis melo var. makuwa] >TYK27148.1 putative m... [more]
KAA0047586.11.5e-8660.25putative mitochondrial protein [Cucumis melo var. makuwa] >TYK08246.1 putative m... [more]
TYJ97594.11.5e-8364.08putative mitochondrial protein [Cucumis melo var. makuwa][more]
KAA0056771.11.5e-8364.08putative mitochondrial protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
ATMG00810.11.1e-2635.41DNA/RNA polymerases superfamily protein [more]
AT4G23160.12.4e-2632.71cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 40..126
e-value: 9.6E-14
score: 51.6
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 51..192
NoneNo IPR availablePANTHERPTHR11439:SF344SUBFAMILY NOT NAMEDcoord: 51..192
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 169..244
e-value: 1.82547E-29
score: 107.169
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 46..251

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0005613.1Pay0005613.1mRNA