PI0028785 (gene) Melon (PI 482460) v1

Overview
NamePI0028785
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
Description50S ribosomal protein HLP
Locationchr04: 1004612 .. 1006743 (-)
RNA-Seq ExpressionPI0028785
SyntenyPI0028785
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGCAACTCCAGAGTTCTCGTTGCCGTCGTTCTGTCTTCGTGCTCTTTTCTCCCTGCGCCGGTTTCGTAACTAAGATTTTGGCGACCAAAGTCAGAGATGGCTGCCGCTTTTGCTTCAAAGTTTTCCCCCGGTATTTGATTTTTTCTGAAATAGGTGGATCCTGGGACTTCTTTTGTTTTTTTTATTTGGAGCTGCTACTGCTACTGCTACAAGCGTTGTTTCCTTCTCTTTCAGGATTCTTATGGTTGTATTGAACTTGTTTTCACCCGATTCAACTTAAGAAATGCTGGTTTTTCTGTTTCTTTCTGATTGCTAGAAAAGAAATTCCCAATTGATTTTGCTTTCACGTATATTTGCTCACATGTTTCAATGTTACTGATTTGTTTCTAGAATACTTTTCAGGTTATACATTGTTGAGTTGTGCACATCTTGTTGTAACATTTATCGTTACTTTGATTTTTCAATCTTTCATTTGTCTTATTTTAGTTTTGAATTTCTAGTTGGTGTGAAACTCATTCTTGCTCATTGTTTTATGCTCAATGTTTCTGGAAAATTAAACTAGTCAGCCGTTCATTGTTGGGTGGACTTGGAAACAATTTGTCTACTTCATTGACCGCATCAAATGAGAGAATATGCAGCAGTTTCATCTCGCAGGTCTGCTTCTCTGAAATTTTAATCTACCCATCTGACTTTCGCATTAACAAGAGAGTCTAAGTAGAGAATGCATGAATAATATATTCATATGCATGAAAGAAAGTTACATGCCTCTTTCACTACTTATACTAAAATTGCTATTTAGGAGATAGGATGGCTATAAAATAGGTAGTTAGAAAACAATGCATTCTTCCAGAACTTGGAGAAGTTTGTCTTTTCAATATATTTATATATATAAATAAAATCAGGGAAGTTCGTTATGAGGCTTGTTTGGACAATGTGGGTTGAGTTCAAGTTTCAGCTGTTTGCAATTGTTTTCCTGGAATATAAACGATAGAAGTTCAGTGCTCCTAGACTAAATTTGTGCCTTGCTCGAACACTTGTCCATGCTAAAATTTGATGATGGCAATTTTCTGCGCATTGATATGTACTTGTTAATACCTTGAAGAGCTACTGAAATGAAAGAAGGAATTATCTGTAAATTTTAAGAGGTCATAAAATAATTTGGAGATAAACGTTGCATTTTTTAAATCATTGTGAGCAGCATAAAATGTAGAGGAAACATTGATGGACTACTATCAAGTTCTAATCTAACCTTCTGTGTTGCCATTGTTGCAGCAACAAAGAACTTTCATACAGATGAGAACTGTGCTAAAAGTAGTGGACAATTCGGGTGCAAAAAAAGTGATGTGCATACAAGCATTGAAGGGGAAGAAAGGAGCGCGGTTAGGAGACACAATCGTCGCATCAGTGAAAGAAGCCCATCCTAATGGAAAAGTGAAGAAAGGAAAAGTTGTATATGGTGTAGTTGTGCGAGCTGCAATGCAAAGAGGCCGCTGTGATGGGAGTGAGGTCAAGTTTGATGATAACGCTGTAGTACTTGTAGATAAGCAAGGCCAGCCTATTGGGACGAGAGTGTTTGGTCCAGTTCCTCACGAACTCAGGAAGAAAAAGCACGTGAAGATTCTTACTTTAGCAGAGCACATTGCTTGAAATCAATAATCAAGTCGGAGCCAAGGATAGAAGGTTATGTTTGTTAACTTCTTAATGATGTTCCCAAAAGCACAACCTTATTGAGGTTTATTGGAAGAAAGCAAATGAATCTGCTAAAACCATCTGATAAATTTGTCTTTGACAAATGATTGGGAAGTTGTTGCAGCAGCTCTTATCGATCCGTCTTCTGTTTTTAATTTAAAAAACTAGGACGTGACTGGTTAGTTTTCGAACTCGGTTCAACCAGTGCTTAAATGGCATCCAAAATACAGATGTTGAGAACTTTAAACGTGGTTTGAAAGTGTTTCTTGGACTGGCAGAAGCCAACGTTTATACATTATTCAATTTTAACTCAAGATTTAAGGTTAAGATTGCACCATCTAAGTAATGAGTCCATTGGCTTAATGAAATTTTCTTTGTGCTAATTGTTGATTGTATGGAAAGCCTATCTTGATTAATGTACAGAAATTTAGAAGGAAAACGCT

mRNA sequence

CGCAACTCCAGAGTTCTCGTTGCCGTCGTTCTGTCTTCGTGCTCTTTTCTCCCTGCGCCGGTTTCGTAACTAAGATTTTGGCGACCAAAGTCAGAGATGGCTGCCGCTTTTGCTTCAAAGTTTTCCCCCGTCAGCCGTTCATTGTTGGGTGGACTTGGAAACAATTTGTCTACTTCATTGACCGCATCAAATGAGAGAATATGCAGCAGTTTCATCTCGCAGCAACAAAGAACTTTCATACAGATGAGAACTGTGCTAAAAGTAGTGGACAATTCGGGTGCAAAAAAAGTGATGTGCATACAAGCATTGAAGGGGAAGAAAGGAGCGCGGTTAGGAGACACAATCGTCGCATCAGTGAAAGAAGCCCATCCTAATGGAAAAGTGAAGAAAGGAAAAGTTGTATATGGTGTAGTTGTGCGAGCTGCAATGCAAAGAGGCCGCTGTGATGGGAGTGAGGTCAAGTTTGATGATAACGCTGTAGTACTTGTAGATAAGCAAGGCCAGCCTATTGGGACGAGAGTGTTTGGTCCAGTTCCTCACGAACTCAGGAAGAAAAAGCACGTGAAGATTCTTACTTTAGCAGAGCACATTGCTTGAAATCAATAATCAAGTCGGAGCCAAGGATAGAAGGTTATGTTTGTTAACTTCTTAATGATGTTCCCAAAAGCACAACCTTATTGAGGTTTATTGGAAGAAAGCAAATGAATCTGCTAAAACCATCTGATAAATTTGTCTTTGACAAATGATTGGGAAGTTGTTGCAGCAGCTCTTATCGATCCGTCTTCTGTTTTTAATTTAAAAAACTAGGACGTGACTGGTTAGTTTTCGAACTCGGTTCAACCAGTGCTTAAATGGCATCCAAAATACAGATGTTGAGAACTTTAAACGTGGTTTGAAAGTGTTTCTTGGACTGGCAGAAGCCAACGTTTATACATTATTCAATTTTAACTCAAGATTTAAGGTTAAGATTGCACCATCTAAGTAATGAGTCCATTGGCTTAATGAAATTTTCTTTGTGCTAATTGTTGATTGTATGGAAAGCCTATCTTGATTAATGTACAGAAATTTAGAAGGAAAACGCT

Coding sequence (CDS)

ATGGCTGCCGCTTTTGCTTCAAAGTTTTCCCCCGTCAGCCGTTCATTGTTGGGTGGACTTGGAAACAATTTGTCTACTTCATTGACCGCATCAAATGAGAGAATATGCAGCAGTTTCATCTCGCAGCAACAAAGAACTTTCATACAGATGAGAACTGTGCTAAAAGTAGTGGACAATTCGGGTGCAAAAAAAGTGATGTGCATACAAGCATTGAAGGGGAAGAAAGGAGCGCGGTTAGGAGACACAATCGTCGCATCAGTGAAAGAAGCCCATCCTAATGGAAAAGTGAAGAAAGGAAAAGTTGTATATGGTGTAGTTGTGCGAGCTGCAATGCAAAGAGGCCGCTGTGATGGGAGTGAGGTCAAGTTTGATGATAACGCTGTAGTACTTGTAGATAAGCAAGGCCAGCCTATTGGGACGAGAGTGTTTGGTCCAGTTCCTCACGAACTCAGGAAGAAAAAGCACGTGAAGATTCTTACTTTAGCAGAGCACATTGCTTGA

Protein sequence

MAAAFASKFSPVSRSLLGGLGNNLSTSLTASNERICSSFISQQQRTFIQMRTVLKVVDNSGAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQRGRCDGSEVKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA
Homology
[Close]
BLAST of PI0028785 vs. ExPASy Swiss-Prot
Match: Q93Z17 (50S ribosomal protein HLP, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HLP PE=1 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 2.8e-61
Identity = 133/175 (76.00%), Postives = 144/175 (82.29%), Query Frame = 0 

Query: 1   MAAAFASKFSPVSRSLLGGLGNNLSTSLTASNERICSSFISQQQ--RTFIQMRTVLKVVD 60
           MAAAFAS+ +   RSLLGGL N    S+ +SN  +  S +SQQQ  RTFIQM TVLKVVD
Sbjct: 1   MAAAFASRLTRGGRSLLGGLNN--GGSMNSSNGMMNESILSQQQQRRTFIQMGTVLKVVD 60

Query: 61  NSGAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQRGRCDG 120
           NSGAKKVMCIQALKGKKGARLGDTIVASVKEA PNGKVKKG VVYGVVVRAAMQRGR DG
Sbjct: 61  NSGAKKVMCIQALKGKKGARLGDTIVASVKEAMPNGKVKKGAVVYGVVVRAAMQRGRVDG 120

Query: 121 SEVKFDDNAVVLVDKQG-------QPIGTRVFGPVPHELRKKKHVKILTLAEHIA 167
           SEV+FDDNAVVLVD +        QPIGTRVFGPVPHELRKKKH+KIL LA+H+A
Sbjct: 121 SEVRFDDNAVVLVDSKDKNTKTDRQPIGTRVFGPVPHELRKKKHLKILALAQHVA 173

[Close]
BLAST of PI0028785 vs. ExPASy Swiss-Prot
Match: Q84JG5 (50S ribosomal protein HLL, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HLL PE=2 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 3.4e-46
Identity = 116/196 (59.18%), Postives = 137/196 (69.90%), Query Frame = 0 

Query: 1   MAAAFASKFSPVSRSLLGGLGNNLSTSL-TASNERICSSFISQQQ-RTFIQMRTVLKVVD 60
           MA A ASK S   RSLLGGL N  S  + ++SN  +  S +SQQQ RTFIQM T+LK VD
Sbjct: 1   MATALASKLSK-GRSLLGGLCNAFSGLMNSSSNGMMNGSILSQQQHRTFIQMGTILKCVD 60

Query: 61  NSGAKKVMCIQALKGKKGARLGDTIVASVKEAH------------PNGKVKKGKVVYGVV 120
           NS AK+VMCIQ+L+GKKGARLGD IV SVKEA+            P GKVKKG VVYGVV
Sbjct: 61  NSCAKEVMCIQSLRGKKGARLGDIIVGSVKEANPIVQKKVKKDAIPKGKVKKGMVVYGVV 120

Query: 121 VRAAMQRGRCDGSEVKFDDNAVVLV---DKQG--------------QPIGTRVFGPVPHE 166
           VRAAM +GR DGS+VKFDDNA+V+V   +K+G              QP GTRVFGPVPHE
Sbjct: 121 VRAAMPKGRADGSQVKFDDNAIVVVGIKEKKGQNNSHGSKRKMEYNQPTGTRVFGPVPHE 180

[Close]
BLAST of PI0028785 vs. ExPASy Swiss-Prot
Match: A8GVC4 (50S ribosomal protein L14 OS=Rickettsia bellii (strain OSU 85-389) OX=391896 GN=rplN PE=3 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 2.8e-32
Identity = 73/120 (60.83%), Postives = 91/120 (75.83%), Query Frame = 0 

Query: 48  IQMRTVLKVVDNSGAKKVMCIQALKGKKG--ARLGDTIVASVKEAHPNGKVKKGKVVYGV 107
           IQM+++L+V DNSGAKKVMCI+ L G     A+LGD IV S+KEA P GKVKKG V  GV
Sbjct: 2   IQMQSILEVADNSGAKKVMCIKVLGGSHHMVAKLGDVIVVSIKEAIPGGKVKKGDVYKGV 61

Query: 108 VVRAAMQRGRCDGSEVKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHI 166
           +VR      R DGS +KFD NA+VL++KQ +PIGTRVFGPV  ELR KK+V+I++LAE +
Sbjct: 62  IVRTKTGVVRADGSTIKFDKNALVLLNKQDEPIGTRVFGPVTRELRAKKYVRIMSLAEEV 121

[Close]
BLAST of PI0028785 vs. ExPASy Swiss-Prot
Match: Q1RHN1 (50S ribosomal protein L14 OS=Rickettsia bellii (strain RML369-C) OX=336407 GN=rplN PE=3 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 2.8e-32
Identity = 73/120 (60.83%), Postives = 91/120 (75.83%), Query Frame = 0 

Query: 48  IQMRTVLKVVDNSGAKKVMCIQALKGKKG--ARLGDTIVASVKEAHPNGKVKKGKVVYGV 107
           IQM+++L+V DNSGAKKVMCI+ L G     A+LGD IV S+KEA P GKVKKG V  GV
Sbjct: 2   IQMQSILEVADNSGAKKVMCIKVLGGSHHMVAKLGDVIVVSIKEAIPGGKVKKGDVYKGV 61

Query: 108 VVRAAMQRGRCDGSEVKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHI 166
           +VR      R DGS +KFD NA+VL++KQ +PIGTRVFGPV  ELR KK+V+I++LAE +
Sbjct: 62  IVRTKTGVVRADGSTIKFDKNALVLLNKQDEPIGTRVFGPVTRELRAKKYVRIMSLAEEV 121

[Close]
BLAST of PI0028785 vs. ExPASy Swiss-Prot
Match: Q9ZCR5 (50S ribosomal protein L14 OS=Rickettsia prowazekii (strain Madrid E) OX=272947 GN=rplN PE=3 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 3.6e-32
Identity = 73/120 (60.83%), Postives = 91/120 (75.83%), Query Frame = 0 

Query: 48  IQMRTVLKVVDNSGAKKVMCIQALKGKKG--ARLGDTIVASVKEAHPNGKVKKGKVVYGV 107
           IQM+++L+V DNSGAKKVMCI+ L G     A+LGD IV S+KEA P GKVKKG V  GV
Sbjct: 2   IQMQSILEVADNSGAKKVMCIKVLGGSHHMMAKLGDVIVVSIKEAIPGGKVKKGDVYKGV 61

Query: 108 VVRAAMQRGRCDGSEVKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHI 166
           +VR      R DGS +KFD NA+VL++KQ +PIGTRVFGPV  ELR KK+V+I++LAE +
Sbjct: 62  IVRTKTGVVRSDGSTIKFDKNALVLLNKQDEPIGTRVFGPVTRELRAKKYVRIMSLAEEV 121

[Close]
BLAST of PI0028785 vs. ExPASy TrEMBL
Match: A0A1S3AZ44 (50S ribosomal protein HLP, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484354 PE=3 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 5.7e-81
Identity = 161/166 (96.99%), Postives = 163/166 (98.19%), Query Frame = 0 

Query: 1   MAAAFASKFSPVSRSLLGGLGNNLSTSLTASNERICSSFISQQQRTFIQMRTVLKVVDNS 60
           MAAAFASKFS VSRSLLGGLGNNLSTSLT SNE ICSSFISQQQRTFIQMRTVLKVVDNS
Sbjct: 1   MAAAFASKFSRVSRSLLGGLGNNLSTSLTTSNETICSSFISQQQRTFIQMRTVLKVVDNS 60

Query: 61  GAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQRGRCDGSE 120
           GAKKVMCIQ+LKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQ+GRCDGSE
Sbjct: 61  GAKKVMCIQSLKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSE 120

Query: 121 VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 167
           VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA
Sbjct: 121 VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 166

[Close]
BLAST of PI0028785 vs. ExPASy TrEMBL
Match: A0A0A0KIN2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G524020 PE=3 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.2e-80
Identity = 161/166 (96.99%), Postives = 162/166 (97.59%), Query Frame = 0 

Query: 1   MAAAFASKFSPVSRSLLGGLGNNLSTSLTASNERICSSFISQQQRTFIQMRTVLKVVDNS 60
           MAAAFASKFS VSRSLLGGLGNNLST LTAS E ICSSFISQQQRTFIQMRTVLKVVDNS
Sbjct: 87  MAAAFASKFSRVSRSLLGGLGNNLSTLLTASKESICSSFISQQQRTFIQMRTVLKVVDNS 146

Query: 61  GAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQRGRCDGSE 120
           GAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQ+GRCDGSE
Sbjct: 147 GAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSE 206

Query: 121 VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 167
           VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA
Sbjct: 207 VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 252

[Close]
BLAST of PI0028785 vs. ExPASy TrEMBL
Match: A0A1S3AZ61 (50S ribosomal protein HLP, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484354 PE=3 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 1.8e-79
Identity = 161/168 (95.83%), Postives = 163/168 (97.02%), Query Frame = 0 

Query: 1   MAAAFASKFSPVSRSLLGGLGNNLSTSLTASNERICSSFIS--QQQRTFIQMRTVLKVVD 60
           MAAAFASKFS VSRSLLGGLGNNLSTSLT SNE ICSSFIS  QQQRTFIQMRTVLKVVD
Sbjct: 1   MAAAFASKFSRVSRSLLGGLGNNLSTSLTTSNETICSSFISQLQQQRTFIQMRTVLKVVD 60

Query: 61  NSGAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQRGRCDG 120
           NSGAKKVMCIQ+LKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQ+GRCDG
Sbjct: 61  NSGAKKVMCIQSLKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDG 120

Query: 121 SEVKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 167
           SEVKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA
Sbjct: 121 SEVKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 168

[Close]
BLAST of PI0028785 vs. ExPASy TrEMBL
Match: A0A6J1EE21 (50S ribosomal protein HLP, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111433311 PE=3 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 9.1e-79
Identity = 158/166 (95.18%), Postives = 160/166 (96.39%), Query Frame = 0 

Query: 1   MAAAFASKFSPVSRSLLGGLGNNLSTSLTASNERICSSFISQQQRTFIQMRTVLKVVDNS 60
           MAAAFASK S V RSLLGGLG NLS SLTASNE +CSSFISQQQRTFIQMRTVLKVVDNS
Sbjct: 1   MAAAFASKCSRVGRSLLGGLGKNLSGSLTASNETVCSSFISQQQRTFIQMRTVLKVVDNS 60

Query: 61  GAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQRGRCDGSE 120
           GAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQ+GRCDGSE
Sbjct: 61  GAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSE 120

Query: 121 VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 167
           VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA
Sbjct: 121 VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 166

[Close]
BLAST of PI0028785 vs. ExPASy TrEMBL
Match: A0A5D3CNW7 (50S ribosomal protein HLP OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009160 PE=3 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.2e-78
Identity = 160/168 (95.24%), Postives = 162/168 (96.43%), Query Frame = 0 

Query: 1   MAAAFASKFSPVSRSLLGGLGNNLSTSLTASNERICSSFIS--QQQRTFIQMRTVLKVVD 60
           MAAAFASKFS VSRSLLGGLGNNLSTSLT SNE ICSSFIS  QQQRTFIQMRTVLKVVD
Sbjct: 1   MAAAFASKFSRVSRSLLGGLGNNLSTSLTTSNETICSSFISQLQQQRTFIQMRTVLKVVD 60

Query: 61  NSGAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQRGRCDG 120
           NSGAKKVMCIQ+LKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQ+GRCDG
Sbjct: 61  NSGAKKVMCIQSLKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDG 120

Query: 121 SEVKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 167
           SEVKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKH KILTLAEHIA
Sbjct: 121 SEVKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHGKILTLAEHIA 168

[Close]
BLAST of PI0028785 vs. NCBI nr
Match: XP_008439613.1 (PREDICTED: 50S ribosomal protein HLP, mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 310.1 bits (793), Expect = 1.2e-80
Identity = 161/166 (96.99%), Postives = 163/166 (98.19%), Query Frame = 0 

Query: 1   MAAAFASKFSPVSRSLLGGLGNNLSTSLTASNERICSSFISQQQRTFIQMRTVLKVVDNS 60
           MAAAFASKFS VSRSLLGGLGNNLSTSLT SNE ICSSFISQQQRTFIQMRTVLKVVDNS
Sbjct: 1   MAAAFASKFSRVSRSLLGGLGNNLSTSLTTSNETICSSFISQQQRTFIQMRTVLKVVDNS 60

Query: 61  GAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQRGRCDGSE 120
           GAKKVMCIQ+LKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQ+GRCDGSE
Sbjct: 61  GAKKVMCIQSLKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSE 120

Query: 121 VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 167
           VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA
Sbjct: 121 VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 166

[Close]
BLAST of PI0028785 vs. NCBI nr
Match: XP_011658297.1 (50S ribosomal protein HLP, mitochondrial isoform X2 [Cucumis sativus])

HSP 1 Score: 308.1 bits (788), Expect = 4.5e-80
Identity = 161/166 (96.99%), Postives = 162/166 (97.59%), Query Frame = 0 

Query: 1   MAAAFASKFSPVSRSLLGGLGNNLSTSLTASNERICSSFISQQQRTFIQMRTVLKVVDNS 60
           MAAAFASKFS VSRSLLGGLGNNLST LTAS E ICSSFISQQQRTFIQMRTVLKVVDNS
Sbjct: 1   MAAAFASKFSRVSRSLLGGLGNNLSTLLTASKESICSSFISQQQRTFIQMRTVLKVVDNS 60

Query: 61  GAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQRGRCDGSE 120
           GAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQ+GRCDGSE
Sbjct: 61  GAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSE 120

Query: 121 VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 167
           VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA
Sbjct: 121 VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 166

[Close]
BLAST of PI0028785 vs. NCBI nr
Match: XP_008439612.1 (PREDICTED: 50S ribosomal protein HLP, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 305.1 bits (780), Expect = 3.8e-79
Identity = 161/168 (95.83%), Postives = 163/168 (97.02%), Query Frame = 0 

Query: 1   MAAAFASKFSPVSRSLLGGLGNNLSTSLTASNERICSSFIS--QQQRTFIQMRTVLKVVD 60
           MAAAFASKFS VSRSLLGGLGNNLSTSLT SNE ICSSFIS  QQQRTFIQMRTVLKVVD
Sbjct: 1   MAAAFASKFSRVSRSLLGGLGNNLSTSLTTSNETICSSFISQLQQQRTFIQMRTVLKVVD 60

Query: 61  NSGAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQRGRCDG 120
           NSGAKKVMCIQ+LKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQ+GRCDG
Sbjct: 61  NSGAKKVMCIQSLKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDG 120

Query: 121 SEVKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 167
           SEVKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA
Sbjct: 121 SEVKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 168

[Close]
BLAST of PI0028785 vs. NCBI nr
Match: XP_031742368.1 (50S ribosomal protein HLP, mitochondrial isoform X1 [Cucumis sativus])

HSP 1 Score: 303.1 bits (775), Expect = 1.4e-78
Identity = 161/168 (95.83%), Postives = 162/168 (96.43%), Query Frame = 0 

Query: 1   MAAAFASKFSPVSRSLLGGLGNNLSTSLTASNERICSSFIS--QQQRTFIQMRTVLKVVD 60
           MAAAFASKFS VSRSLLGGLGNNLST LTAS E ICSSFIS  QQQRTFIQMRTVLKVVD
Sbjct: 1   MAAAFASKFSRVSRSLLGGLGNNLSTLLTASKESICSSFISQLQQQRTFIQMRTVLKVVD 60

Query: 61  NSGAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQRGRCDG 120
           NSGAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQ+GRCDG
Sbjct: 61  NSGAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDG 120

Query: 121 SEVKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 167
           SEVKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA
Sbjct: 121 SEVKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 168

[Close]
BLAST of PI0028785 vs. NCBI nr
Match: XP_022926089.1 (50S ribosomal protein HLP, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 302.8 bits (774), Expect = 1.9e-78
Identity = 158/166 (95.18%), Postives = 160/166 (96.39%), Query Frame = 0 

Query: 1   MAAAFASKFSPVSRSLLGGLGNNLSTSLTASNERICSSFISQQQRTFIQMRTVLKVVDNS 60
           MAAAFASK S V RSLLGGLG NLS SLTASNE +CSSFISQQQRTFIQMRTVLKVVDNS
Sbjct: 1   MAAAFASKCSRVGRSLLGGLGKNLSGSLTASNETVCSSFISQQQRTFIQMRTVLKVVDNS 60

Query: 61  GAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQRGRCDGSE 120
           GAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQ+GRCDGSE
Sbjct: 61  GAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSE 120

Query: 121 VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 167
           VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA
Sbjct: 121 VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 166

[Close]
BLAST of PI0028785 vs. TAIR 10
Match: AT5G46160.2 (Ribosomal protein L14p/L23e family protein )

HSP 1 Score: 236.5 bits (602), Expect = 1.5e-62
Identity = 133/174 (76.44%), Postives = 144/174 (82.76%), Query Frame = 0 

Query: 1   MAAAFASKFSPVSRSLLGGLGNNLSTSLTASNERICSSFISQQQ-RTFIQMRTVLKVVDN 60
           MAAAFAS+ +   RSLLGGL N    S+ +SN  +  S +SQQQ RTFIQM TVLKVVDN
Sbjct: 1   MAAAFASRLTRGGRSLLGGLNN--GGSMNSSNGMMNESILSQQQRRTFIQMGTVLKVVDN 60

Query: 61  SGAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQRGRCDGS 120
           SGAKKVMCIQALKGKKGARLGDTIVASVKEA PNGKVKKG VVYGVVVRAAMQRGR DGS
Sbjct: 61  SGAKKVMCIQALKGKKGARLGDTIVASVKEAMPNGKVKKGAVVYGVVVRAAMQRGRVDGS 120

Query: 121 EVKFDDNAVVLVDKQG-------QPIGTRVFGPVPHELRKKKHVKILTLAEHIA 167
           EV+FDDNAVVLVD +        QPIGTRVFGPVPHELRKKKH+KIL LA+H+A
Sbjct: 121 EVRFDDNAVVLVDSKDKNTKTDRQPIGTRVFGPVPHELRKKKHLKILALAQHVA 172

[Close]
BLAST of PI0028785 vs. TAIR 10
Match: AT5G46160.1 (Ribosomal protein L14p/L23e family protein )

HSP 1 Score: 236.1 bits (601), Expect = 2.0e-62
Identity = 133/175 (76.00%), Postives = 144/175 (82.29%), Query Frame = 0 

Query: 1   MAAAFASKFSPVSRSLLGGLGNNLSTSLTASNERICSSFISQQQ--RTFIQMRTVLKVVD 60
           MAAAFAS+ +   RSLLGGL N    S+ +SN  +  S +SQQQ  RTFIQM TVLKVVD
Sbjct: 1   MAAAFASRLTRGGRSLLGGLNN--GGSMNSSNGMMNESILSQQQQRRTFIQMGTVLKVVD 60

Query: 61  NSGAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQRGRCDG 120
           NSGAKKVMCIQALKGKKGARLGDTIVASVKEA PNGKVKKG VVYGVVVRAAMQRGR DG
Sbjct: 61  NSGAKKVMCIQALKGKKGARLGDTIVASVKEAMPNGKVKKGAVVYGVVVRAAMQRGRVDG 120

Query: 121 SEVKFDDNAVVLVDKQG-------QPIGTRVFGPVPHELRKKKHVKILTLAEHIA 167
           SEV+FDDNAVVLVD +        QPIGTRVFGPVPHELRKKKH+KIL LA+H+A
Sbjct: 121 SEVRFDDNAVVLVDSKDKNTKTDRQPIGTRVFGPVPHELRKKKHLKILALAQHVA 173

[Close]
BLAST of PI0028785 vs. TAIR 10
Match: AT1G17560.1 (Ribosomal protein L14p/L23e family protein )

HSP 1 Score: 186.0 bits (471), Expect = 2.4e-47
Identity = 116/196 (59.18%), Postives = 137/196 (69.90%), Query Frame = 0 

Query: 1   MAAAFASKFSPVSRSLLGGLGNNLSTSL-TASNERICSSFISQQQ-RTFIQMRTVLKVVD 60
           MA A ASK S   RSLLGGL N  S  + ++SN  +  S +SQQQ RTFIQM T+LK VD
Sbjct: 1   MATALASKLSK-GRSLLGGLCNAFSGLMNSSSNGMMNGSILSQQQHRTFIQMGTILKCVD 60

Query: 61  NSGAKKVMCIQALKGKKGARLGDTIVASVKEAH------------PNGKVKKGKVVYGVV 120
           NS AK+VMCIQ+L+GKKGARLGD IV SVKEA+            P GKVKKG VVYGVV
Sbjct: 61  NSCAKEVMCIQSLRGKKGARLGDIIVGSVKEANPIVQKKVKKDAIPKGKVKKGMVVYGVV 120

Query: 121 VRAAMQRGRCDGSEVKFDDNAVVLV---DKQG--------------QPIGTRVFGPVPHE 166
           VRAAM +GR DGS+VKFDDNA+V+V   +K+G              QP GTRVFGPVPHE
Sbjct: 121 VRAAMPKGRADGSQVKFDDNAIVVVGIKEKKGQNNSHGSKRKMEYNQPTGTRVFGPVPHE 180

[Close]
BLAST of PI0028785 vs. TAIR 10
Match: ATCG00780.1 (ribosomal protein L14 )

HSP 1 Score: 107.5 bits (267), Expect = 1.1e-23
Identity = 52/120 (43.33%), Postives = 83/120 (69.17%), Query Frame = 0 

Query: 48  IQMRTVLKVVDNSGAKKVMCIQAL--KGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGV 107
           IQ +T L V DNSGA+++MCI+ +    ++ A +GD IVA +KEA PN  +++ +V+  V
Sbjct: 2   IQPQTYLNVADNSGARELMCIRIIGASNRRYAHIGDVIVAVIKEAIPNTPLERSEVIRAV 61

Query: 108 VVRAAMQRGRCDGSEVKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHI 166
           +VR   +  R +G+ +++DDNA V++D++G P GTRVFG +P ELR+    KI++LA  +
Sbjct: 62  IVRTCKELKRNNGTIIRYDDNAAVVIDQEGNPKGTRVFGAIPRELRQLNFTKIVSLAPEV 121

[Close]
BLAST of PI0028785 vs. TAIR 10
Match: AT1G04480.1 (Ribosomal protein L14p/L23e family protein )

HSP 1 Score: 53.1 bits (126), Expect = 2.4e-07
Identity = 36/109 (33.03%), Postives = 61/109 (55.96%), Query Frame = 0 

Query: 48  IQMRTVLKVVDNSGAKKVMCIQALKGKKG-------ARLGDTIVASVKEAHPNGKVKKGK 107
           + +   +   DN+GAK +  I ++KG KG       A +GD ++A+VK+  P+    + K
Sbjct: 20  LPVAATVNCADNTGAKNLYII-SVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKK 79

Query: 108 VVYGVVVRAAMQRGRCDGSEVKFDDNAVVLVDKQGQPIGTRVFGPVPHE 150
           V+  V+VR      R DG  + F+DNA V+V+ +G+  G+ + GP+  E
Sbjct: 80  VLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 124

The following BLAST results are available for this feature:
BLAST of PI0028785 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q93Z172.8e-6176.0050S ribosomal protein HLP, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HLP ... [more]
Q84JG53.4e-4659.1850S ribosomal protein HLL, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HLL ... [more]
A8GVC42.8e-3260.8350S ribosomal protein L14 OS=Rickettsia bellii (strain OSU 85-389) OX=391896 GN=... [more]
Q1RHN12.8e-3260.8350S ribosomal protein L14 OS=Rickettsia bellii (strain RML369-C) OX=336407 GN=rp... [more]
Q9ZCR53.6e-3260.8350S ribosomal protein L14 OS=Rickettsia prowazekii (strain Madrid E) OX=272947 G... [more]
BLAST of PI0028785 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3AZ445.7e-8196.9950S ribosomal protein HLP, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=L... [more]
A0A0A0KIN22.2e-8096.99Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G524020 PE=3 SV=1[more]
A0A1S3AZ611.8e-7995.8350S ribosomal protein HLP, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=L... [more]
A0A6J1EE219.1e-7995.1850S ribosomal protein HLP, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=L... [more]
A0A5D3CNW71.2e-7895.2450S ribosomal protein HLP OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
BLAST of PI0028785 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008439613.11.2e-8096.99PREDICTED: 50S ribosomal protein HLP, mitochondrial isoform X2 [Cucumis melo][more]
XP_011658297.14.5e-8096.9950S ribosomal protein HLP, mitochondrial isoform X2 [Cucumis sativus][more]
XP_008439612.13.8e-7995.83PREDICTED: 50S ribosomal protein HLP, mitochondrial isoform X1 [Cucumis melo][more]
XP_031742368.11.4e-7895.8350S ribosomal protein HLP, mitochondrial isoform X1 [Cucumis sativus][more]
XP_022926089.11.9e-7895.1850S ribosomal protein HLP, mitochondrial-like [Cucurbita moschata][more]
BLAST of PI0028785 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G46160.21.5e-6276.44Ribosomal protein L14p/L23e family protein [more]
AT5G46160.12.0e-6276.00Ribosomal protein L14p/L23e family protein [more]
AT1G17560.12.4e-4759.18Ribosomal protein L14p/L23e family protein [more]
ATCG00780.11.1e-2343.33ribosomal protein L14 [more]
AT1G04480.12.4e-0733.03Ribosomal protein L14p/L23e family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000218Ribosomal protein L14PSMARTSM01374Ribosomal_L14_2coord: 47..166
e-value: 1.0E-62
score: 224.4
IPR000218Ribosomal protein L14PPFAMPF00238Ribosomal_L14coord: 48..165
e-value: 9.1E-50
score: 167.7
IPR000218Ribosomal protein L14PPANTHERPTHR1176150S/60S RIBOSOMAL PROTEIN L14/L23coord: 19..166
IPR000218Ribosomal protein L14PHAMAPMF_01367Ribosomal_L14coord: 47..166
score: 23.608328
IPR036853Ribosomal protein L14 superfamilyGENE3D2.40.150.20Ribosomal protein L14coord: 47..166
e-value: 7.6E-48
score: 163.4
IPR036853Ribosomal protein L14 superfamilySUPERFAMILY50193Ribosomal protein L14coord: 48..165
IPR005745Ribosomal protein L14P, bacterial-typeTIGRFAMTIGR01067TIGR01067coord: 48..165
e-value: 1.5E-43
score: 145.5
NoneNo IPR availablePANTHERPTHR11761:SF3850S RIBOSOMAL PROTEIN HLP, MITOCHONDRIAL-LIKE ISOFORM X1coord: 19..166
IPR019972Ribosomal protein L14P, conserved sitePROSITEPS00049RIBOSOMAL_L14coord: 104..130

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0028785.1PI0028785.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005762 mitochondrial large ribosomal subunit
cellular_component GO:0015934 large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0070180 large ribosomal subunit rRNA binding
molecular_function GO:0003735 structural constituent of ribosome