PI0028041 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTCCCCCTTTTCCCACTTGTCCTCTCTTCATTCTCCATTCCTTTGTAAAAACAAGCTGCAGCAGCACACCGGTTTTTGAAATCCACTTCCATTTCCGCCATGGATGAACCTCAACCTCAGCCGGTTTGCGCTCAGGAAGCTCTCAATTTGCTCAATTGCGTTACGGAATCTCCCTTCGATCAAGAGAAATGCTACAGTCTCCTTCATTCTTTGCGTGAATGCGTGCTCAGCAAGGTAATTCAGTTATTCCTTCTCTTCAATTTGCCCTAACCCTTCATCATTTGTTTACATGGTCATTTGTTATTAATTAGTACTGTTTTTTGGAATTTTCGAATTAGGTCATCTACCTCTCTGAATCGAAGTTCGATTGTCATTCTTCGAATTGTGATAATTAATTAGTCGTTTTACTTTAGGATTAGTGAAATGGAAATAGATTCAGGTGGATTTTGGTTTATTGCTTATTAAGATATTCATCAAACATGTGGGGGGATCTTGATTTTAATTTCTGTTTCTGATGTTATTTTCTTTGATTTGTTACTTCAATAGAAAGTGAAGAAATTCTCTCTGGCTGAAGAAGAACAAACAAAACCAATAATCAAGAAGAATGCTTGAAGGAAGCAATTTTGTAAGACTGATTTTGTTCATTTTAAAGTAGGGTCTTGTGCTACTTTACTTGAAATTTTTTTATTTCTTGGAGAGATTGAACTTTGCTGAAAACTGTCAAAATGATTTAGAATTGAAGTCCATCAAAGTGGTGACCATTGAATTCCCCAATAAATTCTGTTTCTGGAATCTGAAAGATTG TTTTCCCCCTTTTCCCACTTGTCCTCTCTTCATTCTCCATTCCTTTGTAAAAACAAGCTGCAGCAGCACACCGGTTTTTGAAATCCACTTCCATTTCCGCCATGGATGAACCTCAACCTCAGCCGGTTTGCGCTCAGGAAGCTCTCAATTTGCTCAATTGCGTTACGGAATCTCCCTTCGATCAAGAGAAATGCTACAGTCTCCTTCATTCTTTGCGTGAATGCGTGCTCAGCAAGAAAGTGAAGAAATTCTCTCTGGCTGAAGAAGAACAAACAAAACCAATAATCAAGAAGAATGCTTGAAGGAAGCAATTTTGTAAGACTGATTTTGTTCATTTTAAAGTAGGGTCTTGTGCTACTTTACTTGAAATTTTTTTATTTCTTGGAGAGATTGAACTTTGCTGAAAACTGTCAAAATGATTTAGAATTGAAGTCCATCAAAGTGGTGACCATTGAATTCCCCAATAAATTCTGTTTCTGGAATCTGAAAGATTG ATGGATGAACCTCAACCTCAGCCGGTTTGCGCTCAGGAAGCTCTCAATTTGCTCAATTGCGTTACGGAATCTCCCTTCGATCAAGAGAAATGCTACAGTCTCCTTCATTCTTTGCGTGAATGCGTGCTCAGCAAGAAAGTGAAGAAATTCTCTCTGGCTGAAGAAGAACAAACAAAACCAATAATCAAGAAGAATGCTTGA MDEPQPQPVCAQEALNLLNCVTESPFDQEKCYSLLHSLRECVLSKKVKKFSLAEEEQTKPIIKKNA Homology
BLAST of PI0028041 vs. ExPASy TrEMBL
Match: A0A0A0KQS7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G151520 PE=4 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 6.5e-28 Identity = 65/66 (98.48%), Postives = 65/66 (98.48%), Query Frame = 0
BLAST of PI0028041 vs. ExPASy TrEMBL
Match: A0A5D3C4E2 (Cox19-like CHCH family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G002030 PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 4.2e-27 Identity = 62/66 (93.94%), Postives = 65/66 (98.48%), Query Frame = 0
BLAST of PI0028041 vs. ExPASy TrEMBL
Match: A0A5J4ZSA8 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_011592 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 3.9e-17 Identity = 51/68 (75.00%), Postives = 58/68 (85.29%), Query Frame = 0
BLAST of PI0028041 vs. ExPASy TrEMBL
Match: A0A7J7CJI7 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW16G00654 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 4.4e-16 Identity = 44/56 (78.57%), Postives = 52/56 (92.86%), Query Frame = 0
BLAST of PI0028041 vs. ExPASy TrEMBL
Match: A0A061GD02 (Cox19-like CHCH family protein OS=Theobroma cacao OX=3641 GN=TCM_016398 PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 2.2e-15 Identity = 47/67 (70.15%), Postives = 53/67 (79.10%), Query Frame = 0
BLAST of PI0028041 vs. NCBI nr
Match: KGN50036.1 (hypothetical protein Csa_000619 [Cucumis sativus]) HSP 1 Score: 132.5 bits (332), Expect = 1.3e-27 Identity = 65/66 (98.48%), Postives = 65/66 (98.48%), Query Frame = 0
BLAST of PI0028041 vs. NCBI nr
Match: KAA0042698.1 (Cox19-like CHCH family protein [Cucumis melo var. makuwa] >TYK06102.1 Cox19-like CHCH family protein [Cucumis melo var. makuwa]) HSP 1 Score: 129.8 bits (325), Expect = 8.7e-27 Identity = 62/66 (93.94%), Postives = 65/66 (98.48%), Query Frame = 0
BLAST of PI0028041 vs. NCBI nr
Match: KAG6606053.1 (hypothetical protein SDJN03_03370, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 105.1 bits (261), Expect = 2.3e-19 Identity = 52/65 (80.00%), Postives = 58/65 (89.23%), Query Frame = 0
BLAST of PI0028041 vs. NCBI nr
Match: KAG7017003.1 (hypothetical protein SDJN02_22114, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 97.8 bits (242), Expect = 3.7e-17 Identity = 51/66 (77.27%), Postives = 57/66 (86.36%), Query Frame = 0
BLAST of PI0028041 vs. NCBI nr
Match: KAA8520919.1 (hypothetical protein F0562_011592 [Nyssa sinensis]) HSP 1 Score: 96.7 bits (239), Expect = 8.1e-17 Identity = 51/68 (75.00%), Postives = 58/68 (85.29%), Query Frame = 0
BLAST of PI0028041 vs. TAIR 10
Match: AT4G23760.1 (Cox19-like CHCH family protein ) HSP 1 Score: 82.4 bits (202), Expect = 1.5e-16 Identity = 38/56 (67.86%), Postives = 44/56 (78.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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