Sequences
The following sequences are available for this feature:
Legend: five_prime_UTR exon CDS polypeptide three_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTTTGGCTCCCCATTATTATTGATTCTTTTAGCTCTTGGGAAACT ATGTTCAAGGTTAGGAGCTTTGGCATAGCTCTTATTATGATTTTAATGGCTATCCCAAACTTTGCTCTTTTGGCCGATAGTAGAATGCTCCGATCAGAGGCCGAGCGTGACGGTGTTAAGGAACATGATGTAGATGAAAAGCCAAAGAGCGTAACACCACAACTGAAAGCTGATTCGAGCAGTAGTGGCGATCGAGTTTTTACGTTGGCTTCAGGACCAAGCAGGAAGGGCGGCGGCCATTAG TCAGAAATGTTCTATACCATGTTGATTTTGGCAGAGAATTTGTTGCTCGAATTTATTTTTTCTTATTGGGATTATGTACATGACTTACAAAA
CTTTTTGGCTCCCCATTATTATTGATTCTTTTAGCTCTTGGGAAACTATGTTCAAGGTTAGGAGCTTTGGCATAGCTCTTATTATGATTTTAATGGCTATCCCAAACTTTGCTCTTTTGGCCGATAGTAGAATGCTCCGATCAGAGGCCGAGCGTGACGGTGTTAAGGAACATGATGTAGATGAAAAGCCAAAGAGCGTAACACCACAACTGAAAGCTGATTCGAGCAGTAGTGGCGATCGAGTTTTTACGTTGGCTTCAGGACCAAGCAGGAAGGGCGGCGGCCATTAGTCAGAAATGTTCTATACCATGTTGATTTTGGCAGAGAATTTGTTGCTCGAATTTATTTTTTCTTATTGGGATTATGTACATGACTTACAAAA
ATGTTCAAGGTTAGGAGCTTTGGCATAGCTCTTATTATGATTTTAATGGCTATCCCAAACTTTGCTCTTTTGGCCGATAGTAGAATGCTCCGATCAGAGGCCGAGCGTGACGGTGTTAAGGAACATGATGTAGATGAAAAGCCAAAGAGCGTAACACCACAACTGAAAGCTGATTCGAGCAGTAGTGGCGATCGAGTTTTTACGTTGGCTTCAGGACCAAGCAGGAAGGGCGGCGGCCATTAG
MFKVRSFGIALIMILMAIPNFALLADSRMLRSEAERDGVKEHDVDEKPKSVTPQLKADSSSSGDRVFTLASGPSRKGGGH
Homology
BLAST of PI0028018 vs. ExPASy TrEMBL
Match:
A0A5A7TI98 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold75G001340 PE=4 SV=1)
HSP 1 Score: 123.2 bits (308), Expect = 4.8e-25
Identity = 68/80 (85.00%), Postives = 72/80 (90.00%), Query Frame = 0
BLAST of PI0028018 vs. ExPASy TrEMBL
Match:
A0A5D3BTU1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold38G00040 PE=4 SV=1)
HSP 1 Score: 120.6 bits (301), Expect = 3.1e-24
Identity = 67/80 (83.75%), Postives = 71/80 (88.75%), Query Frame = 0
BLAST of PI0028018 vs. NCBI nr
Match:
KAE8652345.1 (hypothetical protein Csa_022541, partial [Cucumis sativus])
HSP 1 Score: 124.0 bits (310), Expect = 5.8e-25
Identity = 70/81 (86.42%), Postives = 74/81 (91.36%), Query Frame = 0
BLAST of PI0028018 vs. NCBI nr
Match:
KAA0043050.1 (uncharacterized protein E6C27_scaffold75G001340 [Cucumis melo var. makuwa])
HSP 1 Score: 123.2 bits (308), Expect = 9.8e-25
Identity = 68/80 (85.00%), Postives = 72/80 (90.00%), Query Frame = 0
BLAST of PI0028018 vs. NCBI nr
Match:
TYK01636.1 (uncharacterized protein E5676_scaffold38G00040 [Cucumis melo var. makuwa])
HSP 1 Score: 120.6 bits (301), Expect = 6.4e-24
Identity = 67/80 (83.75%), Postives = 71/80 (88.75%), Query Frame = 0
The following BLAST results are available for this feature:
Match Name E-value Identity Description
Match Name E-value Identity Description
A0A5A7TI98 4.8e-25 85.00 Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more] A0A5D3BTU1 3.1e-24 83.75 Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match Name E-value Identity Description
KAE8652345.1 5.8e-25 86.42 hypothetical protein Csa_022541, partial [Cucumis sativus] [more] KAA0043050.1 9.8e-25 85.00 uncharacterized protein E6C27_scaffold75G001340 [Cucumis melo var. makuwa] [more] TYK01636.1 6.4e-24 83.75 uncharacterized protein E5676_scaffold38G00040 [Cucumis melo var. makuwa] [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
C T T T T T G G C T C C C C A T T A T T A T T G A T T C T T T T A G C T C T T G G G A A A C T A T G T T C A A G G T T A G G A G C T T T G G C A T A G C T C T T A T T A T G A T T T T A A T G G C T A T C C C A A A C T T T G C T C T T T T G G C C G A T A G T A G A A T G C T C C G A T C A G A G G C C G A G C G T G A C G G T G T T A A G G A A C A T G A T G T A G A T G A A A A G C C A A A G A G C G T A A C A C C A C A A C T G A A A G C T G A T T C G A G C A G T A G T G G C G A T C G A G T T T T T A C G T T G G C T T C A G G A C C A A G C A G G A A G G G C G G C G G C C A T T A G T C A G A A A T G T T C T A T A C C A T G T T G A T T T T G G C A G A G A A T T T G T T G C T C G A A T T T A T T T T T T C T T A T T G G G A T T A T G T A C A T G A C T T A C A A A A 50 100 150 200 250 300 350 Score = Score = Score = Sequence mobidb-lite mobidb-lite mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 34..52 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 34..80 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 53..68
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category
Term Accession
Term Name
cellular_component
GO:0016021 integral component of membrane
