Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTAGATTATGGAGGGCTGGAAAATCTCGATTAGTAAAACAAATCCAAGACGCCCCAACAAGGGATGCAATTTTGAAGCTAATGCCCAATAATTTGCAATCTGTAGATGATTGGATGGACTTTGTGAGTGAAAAGACTAGTGCAAACTTCAAGGTATCTAAATCTTTACTTCAAAACGTATACGCTTACATTTTCTAGATATTACTTTGTATCAATATTGAATGTCTTTTATTTGAGTAGTTGAAAAGTGAAAAATACAAAGTCATGAAGAAAAAGCAACTCCCACATACATGTAGTAGGAAAGGGTATGCTCATTTGGCTGAAGAAATGGTAAAGCTCATGATTACTATATTTCAATTTTGCTTTCATATTGTATGTGGCGTCATTTTTTAATCTAATTTTGTAGAAAAAAAGTAGTTCAGATCCAAGTTCAGTCACGAGGGTTGCTTTATGGACTAAAGCACACAAAAGAAGGATGGAAAACCGGTGAATGCACAAGTTGCCGAGACACTCGTATGTTTCTTGTGATTAGACTTTACTATGTTCTTTTTCTCTATGAGCATTTCGTTACGTTTGTATGTTGTTGTTCAATTGACTTATTGTGATTGTAATAAGAATGGGTACTAAGTTTAATATTGAAGGGGAGAGGGGGGAGGGGGGCGGGTTGAAAATGTTTATGCATTGAGTTTTGCTTGTTGGGATATTGTGTTCATTTAGAGTGTGTGAAAGTTTGGTGTGATTAGACTTTACTATGTTCTTTTTCTCTATGAGCATTTGGTTACGTTTGTATATTGTTGGAAAATTAACTTATTGTGATTGCGATAAGAATTGGCAATAAGTTTAATATTGATTAGACTTTACTATGTTCTTTTTCTCTATGAGCATTTGGTTACATTTGTATGTTGTTGAAAAATTAACTTATTGTGATTGTGATAAGAATGGGTACTAAGTTTAATATTGAAGGGGAGAGAGGAGGGGGTGGGGGGTTGAAAATGTTTATGCATTGAGTTTTGCTTGTTGGGATATTGTGTTCATTTAGTGTGTGAAAGTTTGGTGTGATTAGACTTTACTATGTTCTTTTTCTCTATGAGCATTTGGTTACATTTGTATATTGTTGGAAAATTAACTTATTGTGATTGCGATAAGAATTGGCAATAAGTTTAATATTGAAGGGGAGAGAGGAGAGGAAGGGGGGGGGGTTGAAAATGTTTATGCATTTAGTTTTTCTTGTTGGGATATTGTGTTCATTTAGAGTGTGTGAAAGTTTGGTGTGATTAGACTTTACTATGTTCTTTTTCTCTATGAGCATTTGGTTACGTTTATATGTTGTTGGAAAATTAACTTATTGTGATTGTGATAAGAATGGGTAATAAGTTTAATATTGAAGGGGAGAGAGGAGGGGAAGGGGGGGGGTTGAAAATGTTTATGCATTTAGTTTTTCTTGTTGGGATATTGTCAAAAAGCTTATGCAAGAAATTTTTTCTTATACTTGTCTTTAGGAGCGCATTCAACAAATTGAGGCTAAGACAACAACTTCAACAACGAATGTGGTTGATGATGCTTTGAGTAAAGTTCTTGGCCCTGATCGTGGTCATGTAAGAGGATTTGGATTTGGTGTGACACGTTCAAAACTATCTCTTTTATCTCAACAAGATCACAATTATAAAGTTCTTGAAAAAGAATATTTGAAGATGAAGAGGAAATGATAGAAATGAAAGCAATGAAAGATGAGATGATAGAAATGAAAGCAATTATGTCATCTTATATAAAGAAACAGGTAATCTTTTTTCTTTATGTAACAATTACATTCATTTTTTTCCTATTCGTGATTAACTGTATTTTTTGTTTCATATGAAATTATCGTAGGTTGAACCAAGTGAGGAACTTTCAAATGCTAATGCAAGTGCTCCTAAGCCAACAAATATTCCTCCAACTTGTCTAATATCTTGTCCATCGGTAAATTTATTTATAATGGGATGGAAATTACTTTGATCTCATTATTTTCTTATTCTAGTACCTCACATTTTTCTTTTGATAGAGTATCAATAACAACAGTCCAATAAAGTGCAAGTTATTAGATTGGTATGGCTCAGGAGAGATTGTTGCAGAAGGACGTGGTCTTCTAATGATCCAACTGCTCTTGTTCATCACATTCCTATTGGTCCACATGCAGCTAGAGTATGGGTCGATGTATCAAAGAAACCAAATGCATATTTGTGGAGGCCAACATCAGAAATGACATGTATTGAAGAAGCATTGGGCAGTACGGTTGCATGGCCATCTGATAAAGTGACCATTGGTGCGTTATTTTCTAATCTTATAATTTATCTACGGCATTCATTAAGTTTCTCTATATTTGCTTCATATCCACTATTATTGGTGTCTACAAAATCATTTATTGATATACATTTTATAAATTTATGTAGGTGAATGAAATGGTGCCTTACTAG
mRNA sequence
ATGGGTAGATTATGGAGGGCTGGAAAATCTCGATTAGTAAAACAAATCCAAGACGCCCCAACAAGGGATGCAATTTTGAAGCTAATGCCCAATAATTTGCAATCTGTAGATGATTGGATGGACTTTGTGAGTGAAAAGACTAGTGCAAACTTCAAGGAGCGCATTCAACAAATTGAGGCTAAGACAACAACTTCAACAACGAATGTGGTTGATGATGCTTTGAGTAAAGTTCTTGGCCCTGATCGTGGTCATGTTGAACCAAGTGAGGAACTTTCAAATGCTAATGCAAGTGCTCCTAAGCCAACAAATATTCCTCCAACTTGTCTAATATCTTGTCCATCGGTGAATGAAATGGTGCCTTACTAG
Coding sequence (CDS)
ATGGGTAGATTATGGAGGGCTGGAAAATCTCGATTAGTAAAACAAATCCAAGACGCCCCAACAAGGGATGCAATTTTGAAGCTAATGCCCAATAATTTGCAATCTGTAGATGATTGGATGGACTTTGTGAGTGAAAAGACTAGTGCAAACTTCAAGGAGCGCATTCAACAAATTGAGGCTAAGACAACAACTTCAACAACGAATGTGGTTGATGATGCTTTGAGTAAAGTTCTTGGCCCTGATCGTGGTCATGTTGAACCAAGTGAGGAACTTTCAAATGCTAATGCAAGTGCTCCTAAGCCAACAAATATTCCTCCAACTTGTCTAATATCTTGTCCATCGGTGAATGAAATGGTGCCTTACTAG
Protein sequence
MGRLWRAGKSRLVKQIQDAPTRDAILKLMPNNLQSVDDWMDFVSEKTSANFKERIQQIEAKTTTSTTNVVDDALSKVLGPDRGHVEPSEELSNANASAPKPTNIPPTCLISCPSVNEMVPY
Homology
BLAST of PI0026666 vs. ExPASy TrEMBL
Match:
A0A5D3D4L2 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold12553G00010 PE=4 SV=1)
HSP 1 Score: 134.4 bits (337), Expect = 3.1e-28
Identity = 90/196 (45.92%), Postives = 96/196 (48.98%), Query Frame = 0
Query: 1 MGRLWRAGKSRLVKQIQDAPTRDAILKLMPNNLQSVDDWMDFVSEKTSANFK-------- 60
MGRLWRAGKSRLVKQI+DAPT+DAILKLMP+NLQSVDDWMDFVSE TSA FK
Sbjct: 1 MGRLWRAGKSRLVKQIRDAPTKDAILKLMPDNLQSVDDWMDFVSENTSATFKLQSEKYKA 60
Query: 61 ----------------------------------------------------------ER 107
E
Sbjct: 61 MKKKQLPHTCSRKGYASLAEEMRKSSSDPSSVTRVALWTKAHKRKDGQPVNSQVADTLES 120
BLAST of PI0026666 vs. ExPASy TrEMBL
Match:
A0A5A7UTC4 (Putative TNP1-like transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold409G001270 PE=4 SV=1)
HSP 1 Score: 130.6 bits (327), Expect = 4.5e-27
Identity = 88/196 (44.90%), Postives = 94/196 (47.96%), Query Frame = 0
Query: 1 MGRLWRAGKSRLVKQIQDAPTRDAILKLMPNNLQSVDDWMDFVSEKTSANFK-------- 60
MGRLWR GK RLVKQI+DAPT+DAILKLMP+NLQSVDDWMDFVSE TSA FK
Sbjct: 459 MGRLWRTGKYRLVKQIRDAPTKDAILKLMPDNLQSVDDWMDFVSENTSATFKLQSEKYKA 518
Query: 61 ----------------------------------------------------------ER 107
E
Sbjct: 519 MKKKQLPHTCSRKGYASLAEEMRKSSSDPSSVTRVALWTKAHKRKDGQPVNSQVTDTLES 578
BLAST of PI0026666 vs. ExPASy TrEMBL
Match:
A0A5A7TEX1 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold6G00480 PE=4 SV=1)
HSP 1 Score: 128.6 bits (322), Expect = 1.7e-26
Identity = 90/203 (44.33%), Postives = 95/203 (46.80%), Query Frame = 0
Query: 1 MGRLWRAGKSRLVKQIQDAPTRDAILKLMPNNLQSVDDWMDFVSEKTSANFK-------- 60
MGRLWRAGKSRLVKQI+DAPT+DAILKLMP+NLQSVDDWMDFVSEKTSA FK
Sbjct: 170 MGRLWRAGKSRLVKQIRDAPTKDAILKLMPDNLQSVDDWMDFVSEKTSATFKRKSSSDPS 229
Query: 61 ----------------------------ERIQQIEAKTTTSTTNVVDDALSKVLGPDRGH 107
E I+Q EA+TT ST NVVDDALSKVLG DRGH
Sbjct: 230 SVTRVALWTKAHKRKDRQPVNSQVAETLELIEQTEAETTISTINVVDDALSKVLGSDRGH 289
BLAST of PI0026666 vs. ExPASy TrEMBL
Match:
A0A5D3DCM2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1702G00300 PE=4 SV=1)
HSP 1 Score: 125.9 bits (315), Expect = 1.1e-25
Identity = 93/233 (39.91%), Postives = 98/233 (42.06%), Query Frame = 0
Query: 1 MGRLWRAGKSRLVKQIQDAPTRDAILKLMPNNLQSVDDWMDFVSEKTSANFK-------- 60
MGRLWRAGKSRLVKQI+DAPT+DAILKLMP+NLQSVDDWMDFVSEKTSA FK
Sbjct: 1005 MGRLWRAGKSRLVKQIRDAPTKDAILKLMPDNLQSVDDWMDFVSEKTSATFKLKSEKYKA 1064
Query: 61 ----------------------------------------------------------ER 107
ER
Sbjct: 1065 MKKKQLPHTCSRKGYARLAEEMRKSSSDPSLVTRVALWTKAHKRKDGQPVNSQVAETLER 1124
BLAST of PI0026666 vs. ExPASy TrEMBL
Match:
A0A5A7T672 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00660 PE=4 SV=1)
HSP 1 Score: 125.9 bits (315), Expect = 1.1e-25
Identity = 93/233 (39.91%), Postives = 98/233 (42.06%), Query Frame = 0
Query: 1 MGRLWRAGKSRLVKQIQDAPTRDAILKLMPNNLQSVDDWMDFVSEKTSANFK-------- 60
MGRLWRAGKSRLVKQI+DAPT+DAILKLMP+NLQSVDDWMDFVSEKTSA FK
Sbjct: 1042 MGRLWRAGKSRLVKQIRDAPTKDAILKLMPDNLQSVDDWMDFVSEKTSATFKLKSEKYKA 1101
Query: 61 ----------------------------------------------------------ER 107
ER
Sbjct: 1102 MKKKQLPHTCSRKGYARLAEEMRKSSSDPSLVTRVALWTKAHKRKDGQPVNSQVAETLER 1161
BLAST of PI0026666 vs. NCBI nr
Match:
TYK18483.1 (Plant transposase [Cucumis melo var. makuwa])
HSP 1 Score: 134.4 bits (337), Expect = 6.5e-28
Identity = 90/196 (45.92%), Postives = 96/196 (48.98%), Query Frame = 0
Query: 1 MGRLWRAGKSRLVKQIQDAPTRDAILKLMPNNLQSVDDWMDFVSEKTSANFK-------- 60
MGRLWRAGKSRLVKQI+DAPT+DAILKLMP+NLQSVDDWMDFVSE TSA FK
Sbjct: 1 MGRLWRAGKSRLVKQIRDAPTKDAILKLMPDNLQSVDDWMDFVSENTSATFKLQSEKYKA 60
Query: 61 ----------------------------------------------------------ER 107
E
Sbjct: 61 MKKKQLPHTCSRKGYASLAEEMRKSSSDPSSVTRVALWTKAHKRKDGQPVNSQVADTLES 120
BLAST of PI0026666 vs. NCBI nr
Match:
KAA0058414.1 (putative TNP1-like transposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 130.6 bits (327), Expect = 9.3e-27
Identity = 88/196 (44.90%), Postives = 94/196 (47.96%), Query Frame = 0
Query: 1 MGRLWRAGKSRLVKQIQDAPTRDAILKLMPNNLQSVDDWMDFVSEKTSANFK-------- 60
MGRLWR GK RLVKQI+DAPT+DAILKLMP+NLQSVDDWMDFVSE TSA FK
Sbjct: 459 MGRLWRTGKYRLVKQIRDAPTKDAILKLMPDNLQSVDDWMDFVSENTSATFKLQSEKYKA 518
Query: 61 ----------------------------------------------------------ER 107
E
Sbjct: 519 MKKKQLPHTCSRKGYASLAEEMRKSSSDPSSVTRVALWTKAHKRKDGQPVNSQVTDTLES 578
BLAST of PI0026666 vs. NCBI nr
Match:
KAA0041468.1 (Plant transposase [Cucumis melo var. makuwa])
HSP 1 Score: 128.6 bits (322), Expect = 3.5e-26
Identity = 90/203 (44.33%), Postives = 95/203 (46.80%), Query Frame = 0
Query: 1 MGRLWRAGKSRLVKQIQDAPTRDAILKLMPNNLQSVDDWMDFVSEKTSANFK-------- 60
MGRLWRAGKSRLVKQI+DAPT+DAILKLMP+NLQSVDDWMDFVSEKTSA FK
Sbjct: 170 MGRLWRAGKSRLVKQIRDAPTKDAILKLMPDNLQSVDDWMDFVSEKTSATFKRKSSSDPS 229
Query: 61 ----------------------------ERIQQIEAKTTTSTTNVVDDALSKVLGPDRGH 107
E I+Q EA+TT ST NVVDDALSKVLG DRGH
Sbjct: 230 SVTRVALWTKAHKRKDRQPVNSQVAETLELIEQTEAETTISTINVVDDALSKVLGSDRGH 289
BLAST of PI0026666 vs. NCBI nr
Match:
TYK07512.1 (uncharacterized protein E5676_scaffold1702G00300 [Cucumis melo var. makuwa] >TYK21220.1 uncharacterized protein E5676_scaffold359G00290 [Cucumis melo var. makuwa])
HSP 1 Score: 125.9 bits (315), Expect = 2.3e-25
Identity = 93/233 (39.91%), Postives = 98/233 (42.06%), Query Frame = 0
Query: 1 MGRLWRAGKSRLVKQIQDAPTRDAILKLMPNNLQSVDDWMDFVSEKTSANFK-------- 60
MGRLWRAGKSRLVKQI+DAPT+DAILKLMP+NLQSVDDWMDFVSEKTSA FK
Sbjct: 1005 MGRLWRAGKSRLVKQIRDAPTKDAILKLMPDNLQSVDDWMDFVSEKTSATFKLKSEKYKA 1064
Query: 61 ----------------------------------------------------------ER 107
ER
Sbjct: 1065 MKKKQLPHTCSRKGYARLAEEMRKSSSDPSLVTRVALWTKAHKRKDGQPVNSQVAETLER 1124
BLAST of PI0026666 vs. NCBI nr
Match:
KAA0036985.1 (uncharacterized protein E6C27_scaffold86G00660 [Cucumis melo var. makuwa])
HSP 1 Score: 125.9 bits (315), Expect = 2.3e-25
Identity = 93/233 (39.91%), Postives = 98/233 (42.06%), Query Frame = 0
Query: 1 MGRLWRAGKSRLVKQIQDAPTRDAILKLMPNNLQSVDDWMDFVSEKTSANFK-------- 60
MGRLWRAGKSRLVKQI+DAPT+DAILKLMP+NLQSVDDWMDFVSEKTSA FK
Sbjct: 1042 MGRLWRAGKSRLVKQIRDAPTKDAILKLMPDNLQSVDDWMDFVSEKTSATFKLKSEKYKA 1101
Query: 61 ----------------------------------------------------------ER 107
ER
Sbjct: 1102 MKKKQLPHTCSRKGYARLAEEMRKSSSDPSLVTRVALWTKAHKRKDGQPVNSQVAETLER 1161
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3D4L2 | 3.1e-28 | 45.92 | Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold12553G... | [more] |
A0A5A7UTC4 | 4.5e-27 | 44.90 | Putative TNP1-like transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=... | [more] |
A0A5A7TEX1 | 1.7e-26 | 44.33 | Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold6G0048... | [more] |
A0A5D3DCM2 | 1.1e-25 | 39.91 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7T672 | 1.1e-25 | 39.91 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
TYK18483.1 | 6.5e-28 | 45.92 | Plant transposase [Cucumis melo var. makuwa] | [more] |
KAA0058414.1 | 9.3e-27 | 44.90 | putative TNP1-like transposon protein [Cucumis melo var. makuwa] | [more] |
KAA0041468.1 | 3.5e-26 | 44.33 | Plant transposase [Cucumis melo var. makuwa] | [more] |
TYK07512.1 | 2.3e-25 | 39.91 | uncharacterized protein E5676_scaffold1702G00300 [Cucumis melo var. makuwa] >TYK... | [more] |
KAA0036985.1 | 2.3e-25 | 39.91 | uncharacterized protein E6C27_scaffold86G00660 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |