PI0026666 (gene) Melon (PI 482460) v1

Overview


Name	PI0026666
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Plant transposase
Location	chr03: 9642277 .. 9644729 (+)
RNA-Seq Expression	PI0026666
Synteny	PI0026666

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTAGATTATGGAGGGCTGGAAAATCTCGATTAGTAAAACAAATCCAAGACGCCCCAACAAGGGATGCAATTTTGAAGCTAATGCCCAATAATTTGCAATCTGTAGATGATTGGATGGACTTTGTGAGTGAAAAGACTAGTGCAAACTTCAAGGTATCTAAATCTTTACTTCAAAACGTATACGCTTACATTTTCTAGATATTACTTTGTATCAATATTGAATGTCTTTTATTTGAGTAGTTGAAAAGTGAAAAATACAAAGTCATGAAGAAAAAGCAACTCCCACATACATGTAGTAGGAAAGGGTATGCTCATTTGGCTGAAGAAATGGTAAAGCTCATGATTACTATATTTCAATTTTGCTTTCATATTGTATGTGGCGTCATTTTTTAATCTAATTTTGTAGAAAAAAAGTAGTTCAGATCCAAGTTCAGTCACGAGGGTTGCTTTATGGACTAAAGCACACAAAAGAAGGATGGAAAACCGGTGAATGCACAAGTTGCCGAGACACTCGTATGTTTCTTGTGATTAGACTTTACTATGTTCTTTTTCTCTATGAGCATTTCGTTACGTTTGTATGTTGTTGTTCAATTGACTTATTGTGATTGTAATAAGAATGGGTACTAAGTTTAATATTGAAGGGGAGAGGGGGGAGGGGGGCGGGTTGAAAATGTTTATGCATTGAGTTTTGCTTGTTGGGATATTGTGTTCATTTAGAGTGTGTGAAAGTTTGGTGTGATTAGACTTTACTATGTTCTTTTTCTCTATGAGCATTTGGTTACGTTTGTATATTGTTGGAAAATTAACTTATTGTGATTGCGATAAGAATTGGCAATAAGTTTAATATTGATTAGACTTTACTATGTTCTTTTTCTCTATGAGCATTTGGTTACATTTGTATGTTGTTGAAAAATTAACTTATTGTGATTGTGATAAGAATGGGTACTAAGTTTAATATTGAAGGGGAGAGAGGAGGGGGTGGGGGGTTGAAAATGTTTATGCATTGAGTTTTGCTTGTTGGGATATTGTGTTCATTTAGTGTGTGAAAGTTTGGTGTGATTAGACTTTACTATGTTCTTTTTCTCTATGAGCATTTGGTTACATTTGTATATTGTTGGAAAATTAACTTATTGTGATTGCGATAAGAATTGGCAATAAGTTTAATATTGAAGGGGAGAGAGGAGAGGAAGGGGGGGGGGTTGAAAATGTTTATGCATTTAGTTTTTCTTGTTGGGATATTGTGTTCATTTAGAGTGTGTGAAAGTTTGGTGTGATTAGACTTTACTATGTTCTTTTTCTCTATGAGCATTTGGTTACGTTTATATGTTGTTGGAAAATTAACTTATTGTGATTGTGATAAGAATGGGTAATAAGTTTAATATTGAAGGGGAGAGAGGAGGGGAAGGGGGGGGGTTGAAAATGTTTATGCATTTAGTTTTTCTTGTTGGGATATTGTCAAAAAGCTTATGCAAGAAATTTTTTCTTATACTTGTCTTTAGGAGCGCATTCAACAAATTGAGGCTAAGACAACAACTTCAACAACGAATGTGGTTGATGATGCTTTGAGTAAAGTTCTTGGCCCTGATCGTGGTCATGTAAGAGGATTTGGATTTGGTGTGACACGTTCAAAACTATCTCTTTTATCTCAACAAGATCACAATTATAAAGTTCTTGAAAAAGAATATTTGAAGATGAAGAGGAAATGATAGAAATGAAAGCAATGAAAGATGAGATGATAGAAATGAAAGCAATTATGTCATCTTATATAAAGAAACAGGTAATCTTTTTTCTTTATGTAACAATTACATTCATTTTTTTCCTATTCGTGATTAACTGTATTTTTTGTTTCATATGAAATTATCGTAGGTTGAACCAAGTGAGGAACTTTCAAATGCTAATGCAAGTGCTCCTAAGCCAACAAATATTCCTCCAACTTGTCTAATATCTTGTCCATCGGTAAATTTATTTATAATGGGATGGAAATTACTTTGATCTCATTATTTTCTTATTCTAGTACCTCACATTTTTCTTTTGATAGAGTATCAATAACAACAGTCCAATAAAGTGCAAGTTATTAGATTGGTATGGCTCAGGAGAGATTGTTGCAGAAGGACGTGGTCTTCTAATGATCCAACTGCTCTTGTTCATCACATTCCTATTGGTCCACATGCAGCTAGAGTATGGGTCGATGTATCAAAGAAACCAAATGCATATTTGTGGAGGCCAACATCAGAAATGACATGTATTGAAGAAGCATTGGGCAGTACGGTTGCATGGCCATCTGATAAAGTGACCATTGGTGCGTTATTTTCTAATCTTATAATTTATCTACGGCATTCATTAAGTTTCTCTATATTTGCTTCATATCCACTATTATTGGTGTCTACAAAATCATTTATTGATATACATTTTATAAATTTATGTAGGTGAATGAAATGGTGCCTTACTAG

mRNA sequence

ATGGGTAGATTATGGAGGGCTGGAAAATCTCGATTAGTAAAACAAATCCAAGACGCCCCAACAAGGGATGCAATTTTGAAGCTAATGCCCAATAATTTGCAATCTGTAGATGATTGGATGGACTTTGTGAGTGAAAAGACTAGTGCAAACTTCAAGGAGCGCATTCAACAAATTGAGGCTAAGACAACAACTTCAACAACGAATGTGGTTGATGATGCTTTGAGTAAAGTTCTTGGCCCTGATCGTGGTCATGTTGAACCAAGTGAGGAACTTTCAAATGCTAATGCAAGTGCTCCTAAGCCAACAAATATTCCTCCAACTTGTCTAATATCTTGTCCATCGGTGAATGAAATGGTGCCTTACTAG

Coding sequence (CDS)

ATGGGTAGATTATGGAGGGCTGGAAAATCTCGATTAGTAAAACAAATCCAAGACGCCCCAACAAGGGATGCAATTTTGAAGCTAATGCCCAATAATTTGCAATCTGTAGATGATTGGATGGACTTTGTGAGTGAAAAGACTAGTGCAAACTTCAAGGAGCGCATTCAACAAATTGAGGCTAAGACAACAACTTCAACAACGAATGTGGTTGATGATGCTTTGAGTAAAGTTCTTGGCCCTGATCGTGGTCATGTTGAACCAAGTGAGGAACTTTCAAATGCTAATGCAAGTGCTCCTAAGCCAACAAATATTCCTCCAACTTGTCTAATATCTTGTCCATCGGTGAATGAAATGGTGCCTTACTAG

Protein sequence

MGRLWRAGKSRLVKQIQDAPTRDAILKLMPNNLQSVDDWMDFVSEKTSANFKERIQQIEAKTTTSTTNVVDDALSKVLGPDRGHVEPSEELSNANASAPKPTNIPPTCLISCPSVNEMVPY

Homology

[Close]

BLAST of PI0026666 vs. ExPASy TrEMBL
Match: A0A5D3D4L2 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold12553G00010 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 3.1e-28
Identity = 90/196 (45.92%), Postives = 96/196 (48.98%), Query Frame = 0


Query: 1   MGRLWRAGKSRLVKQIQDAPTRDAILKLMPNNLQSVDDWMDFVSEKTSANFK-------- 60
           MGRLWRAGKSRLVKQI+DAPT+DAILKLMP+NLQSVDDWMDFVSE TSA FK        
Sbjct: 1   MGRLWRAGKSRLVKQIRDAPTKDAILKLMPDNLQSVDDWMDFVSENTSATFKLQSEKYKA 60

Query: 61  ----------------------------------------------------------ER 107
                                                                     E 
Sbjct: 61  MKKKQLPHTCSRKGYASLAEEMRKSSSDPSSVTRVALWTKAHKRKDGQPVNSQVADTLES 120

[Close]

BLAST of PI0026666 vs. ExPASy TrEMBL
Match: A0A5A7UTC4 (Putative TNP1-like transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold409G001270 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 4.5e-27
Identity = 88/196 (44.90%), Postives = 94/196 (47.96%), Query Frame = 0


Query: 1   MGRLWRAGKSRLVKQIQDAPTRDAILKLMPNNLQSVDDWMDFVSEKTSANFK-------- 60
           MGRLWR GK RLVKQI+DAPT+DAILKLMP+NLQSVDDWMDFVSE TSA FK        
Sbjct: 459 MGRLWRTGKYRLVKQIRDAPTKDAILKLMPDNLQSVDDWMDFVSENTSATFKLQSEKYKA 518

Query: 61  ----------------------------------------------------------ER 107
                                                                     E 
Sbjct: 519 MKKKQLPHTCSRKGYASLAEEMRKSSSDPSSVTRVALWTKAHKRKDGQPVNSQVTDTLES 578

[Close]

BLAST of PI0026666 vs. ExPASy TrEMBL
Match: A0A5A7TEX1 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold6G00480 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.7e-26
Identity = 90/203 (44.33%), Postives = 95/203 (46.80%), Query Frame = 0


Query: 1   MGRLWRAGKSRLVKQIQDAPTRDAILKLMPNNLQSVDDWMDFVSEKTSANFK-------- 60
           MGRLWRAGKSRLVKQI+DAPT+DAILKLMP+NLQSVDDWMDFVSEKTSA FK        
Sbjct: 170 MGRLWRAGKSRLVKQIRDAPTKDAILKLMPDNLQSVDDWMDFVSEKTSATFKRKSSSDPS 229

Query: 61  ----------------------------ERIQQIEAKTTTSTTNVVDDALSKVLGPDRGH 107
                                       E I+Q EA+TT ST NVVDDALSKVLG DRGH
Sbjct: 230 SVTRVALWTKAHKRKDRQPVNSQVAETLELIEQTEAETTISTINVVDDALSKVLGSDRGH 289

[Close]

BLAST of PI0026666 vs. ExPASy TrEMBL
Match: A0A5D3DCM2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1702G00300 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 1.1e-25
Identity = 93/233 (39.91%), Postives = 98/233 (42.06%), Query Frame = 0


Query: 1    MGRLWRAGKSRLVKQIQDAPTRDAILKLMPNNLQSVDDWMDFVSEKTSANFK-------- 60
            MGRLWRAGKSRLVKQI+DAPT+DAILKLMP+NLQSVDDWMDFVSEKTSA FK        
Sbjct: 1005 MGRLWRAGKSRLVKQIRDAPTKDAILKLMPDNLQSVDDWMDFVSEKTSATFKLKSEKYKA 1064

Query: 61   ----------------------------------------------------------ER 107
                                                                      ER
Sbjct: 1065 MKKKQLPHTCSRKGYARLAEEMRKSSSDPSLVTRVALWTKAHKRKDGQPVNSQVAETLER 1124

[Close]

BLAST of PI0026666 vs. ExPASy TrEMBL
Match: A0A5A7T672 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00660 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 1.1e-25
Identity = 93/233 (39.91%), Postives = 98/233 (42.06%), Query Frame = 0


Query: 1    MGRLWRAGKSRLVKQIQDAPTRDAILKLMPNNLQSVDDWMDFVSEKTSANFK-------- 60
            MGRLWRAGKSRLVKQI+DAPT+DAILKLMP+NLQSVDDWMDFVSEKTSA FK        
Sbjct: 1042 MGRLWRAGKSRLVKQIRDAPTKDAILKLMPDNLQSVDDWMDFVSEKTSATFKLKSEKYKA 1101

Query: 61   ----------------------------------------------------------ER 107
                                                                      ER
Sbjct: 1102 MKKKQLPHTCSRKGYARLAEEMRKSSSDPSLVTRVALWTKAHKRKDGQPVNSQVAETLER 1161

[Close]

BLAST of PI0026666 vs. NCBI nr
Match: TYK18483.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 134.4 bits (337), Expect = 6.5e-28
Identity = 90/196 (45.92%), Postives = 96/196 (48.98%), Query Frame = 0


Query: 1   MGRLWRAGKSRLVKQIQDAPTRDAILKLMPNNLQSVDDWMDFVSEKTSANFK-------- 60
           MGRLWRAGKSRLVKQI+DAPT+DAILKLMP+NLQSVDDWMDFVSE TSA FK        
Sbjct: 1   MGRLWRAGKSRLVKQIRDAPTKDAILKLMPDNLQSVDDWMDFVSENTSATFKLQSEKYKA 60

Query: 61  ----------------------------------------------------------ER 107
                                                                     E 
Sbjct: 61  MKKKQLPHTCSRKGYASLAEEMRKSSSDPSSVTRVALWTKAHKRKDGQPVNSQVADTLES 120

[Close]

BLAST of PI0026666 vs. NCBI nr
Match: KAA0058414.1 (putative TNP1-like transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 130.6 bits (327), Expect = 9.3e-27
Identity = 88/196 (44.90%), Postives = 94/196 (47.96%), Query Frame = 0


Query: 1   MGRLWRAGKSRLVKQIQDAPTRDAILKLMPNNLQSVDDWMDFVSEKTSANFK-------- 60
           MGRLWR GK RLVKQI+DAPT+DAILKLMP+NLQSVDDWMDFVSE TSA FK        
Sbjct: 459 MGRLWRTGKYRLVKQIRDAPTKDAILKLMPDNLQSVDDWMDFVSENTSATFKLQSEKYKA 518

Query: 61  ----------------------------------------------------------ER 107
                                                                     E 
Sbjct: 519 MKKKQLPHTCSRKGYASLAEEMRKSSSDPSSVTRVALWTKAHKRKDGQPVNSQVTDTLES 578

[Close]

BLAST of PI0026666 vs. NCBI nr
Match: KAA0041468.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 128.6 bits (322), Expect = 3.5e-26
Identity = 90/203 (44.33%), Postives = 95/203 (46.80%), Query Frame = 0


Query: 1   MGRLWRAGKSRLVKQIQDAPTRDAILKLMPNNLQSVDDWMDFVSEKTSANFK-------- 60
           MGRLWRAGKSRLVKQI+DAPT+DAILKLMP+NLQSVDDWMDFVSEKTSA FK        
Sbjct: 170 MGRLWRAGKSRLVKQIRDAPTKDAILKLMPDNLQSVDDWMDFVSEKTSATFKRKSSSDPS 229

Query: 61  ----------------------------ERIQQIEAKTTTSTTNVVDDALSKVLGPDRGH 107
                                       E I+Q EA+TT ST NVVDDALSKVLG DRGH
Sbjct: 230 SVTRVALWTKAHKRKDRQPVNSQVAETLELIEQTEAETTISTINVVDDALSKVLGSDRGH 289

[Close]

BLAST of PI0026666 vs. NCBI nr
Match: TYK07512.1 (uncharacterized protein E5676_scaffold1702G00300 [Cucumis melo var. makuwa] >TYK21220.1 uncharacterized protein E5676_scaffold359G00290 [Cucumis melo var. makuwa])

HSP 1 Score: 125.9 bits (315), Expect = 2.3e-25
Identity = 93/233 (39.91%), Postives = 98/233 (42.06%), Query Frame = 0


Query: 1    MGRLWRAGKSRLVKQIQDAPTRDAILKLMPNNLQSVDDWMDFVSEKTSANFK-------- 60
            MGRLWRAGKSRLVKQI+DAPT+DAILKLMP+NLQSVDDWMDFVSEKTSA FK        
Sbjct: 1005 MGRLWRAGKSRLVKQIRDAPTKDAILKLMPDNLQSVDDWMDFVSEKTSATFKLKSEKYKA 1064

Query: 61   ----------------------------------------------------------ER 107
                                                                      ER
Sbjct: 1065 MKKKQLPHTCSRKGYARLAEEMRKSSSDPSLVTRVALWTKAHKRKDGQPVNSQVAETLER 1124

[Close]

BLAST of PI0026666 vs. NCBI nr
Match: KAA0036985.1 (uncharacterized protein E6C27_scaffold86G00660 [Cucumis melo var. makuwa])

HSP 1 Score: 125.9 bits (315), Expect = 2.3e-25
Identity = 93/233 (39.91%), Postives = 98/233 (42.06%), Query Frame = 0


Query: 1    MGRLWRAGKSRLVKQIQDAPTRDAILKLMPNNLQSVDDWMDFVSEKTSANFK-------- 60
            MGRLWRAGKSRLVKQI+DAPT+DAILKLMP+NLQSVDDWMDFVSEKTSA FK        
Sbjct: 1042 MGRLWRAGKSRLVKQIRDAPTKDAILKLMPDNLQSVDDWMDFVSEKTSATFKLKSEKYKA 1101

Query: 61   ----------------------------------------------------------ER 107
                                                                      ER
Sbjct: 1102 MKKKQLPHTCSRKGYARLAEEMRKSSSDPSLVTRVALWTKAHKRKDGQPVNSQVAETLER 1161

The following BLAST results are available for this feature:

BLAST of PI0026666 vs.


Match Name	E-value	Identity	Description

BLAST of PI0026666 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D4L2	3.1e-28	45.92	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold12553G...	[more]
A0A5A7UTC4	4.5e-27	44.90	Putative TNP1-like transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5A7TEX1	1.7e-26	44.33	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold6G0048...	[more]
A0A5D3DCM2	1.1e-25	39.91	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7T672	1.1e-25	39.91	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of PI0026666 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK18483.1	6.5e-28	45.92	Plant transposase [Cucumis melo var. makuwa]	[more]
KAA0058414.1	9.3e-27	44.90	putative TNP1-like transposon protein [Cucumis melo var. makuwa]	[more]
KAA0041468.1	3.5e-26	44.33	Plant transposase [Cucumis melo var. makuwa]	[more]
TYK07512.1	2.3e-25	39.91	uncharacterized protein E5676_scaffold1702G00300 [Cucumis melo var. makuwa] >TYK...	[more]
KAA0036985.1	2.3e-25	39.91	uncharacterized protein E6C27_scaffold86G00660 [Cucumis melo var. makuwa]	[more]

BLAST of PI0026666 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..107
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..107

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0026666.1	PI0026666.1	mRNA