PI0025703 (gene) Melon (PI 482460) v1

Overview
NamePI0025703
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Locationchr06: 13442585 .. 13443585 (-)
RNA-Seq ExpressionPI0025703
SyntenyPI0025703
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAGTTCTTCACGAGCACCCAAACACACATGGACTAAAGAGGAAGAAGCGAAGTTGGTTGAGTATTTGGTGGAATTGGTTTCATCTGGCGGGTGGAGGTTAGATAATGGGACATTTCAACCTGGATATTTAGCACAGTTGCAACGGATGATGGCGGAGAAGTTGCCCGGCACTAACATCCAAGGATCACCGACTATTGATTGTCGTGTGAAATCCCTCAAGAAAACTTATCAGGCAATTGCAGAAATGAGGGGACCATCTTGTAGTGGGTTCGGGTGGAATGAAGAATATCAGTGCATCATCGCGGAACGCGACTTGTTTGATAATTGGGTCAAGTTACAGTTTATTTAACGCGAATTTTACATAATTTAGAAATCACAACCATCTACTAATGTGTTTGTTTCATGTATGTACAGAGTCATCCTGGGGCGAAAGGACTGTTACACAAATCATTTCCATATTATGACGATTTGTCGTACGTGTTCGGCAGAGATCGGGCAACAAGAGCACGTGCGGAGACTTTTGCTGACGTGGGATCTAATGTGCCAAACAGTTTCAACGACAGTGTTACACTTGATGATCTACATGACGAAGACATCCTGACGATGTATAGCCAAAGGGTGGATATGTCCCCAGATGACATGGTAGGAACACGTGCAGGTCGGTCAAGTGATGGACGGAACTGTTCAAGTGGGAGTAAGAGGAAACGGGGTGGCCAACATAGTGAAACAATGGAGGTGATCAGGAATGCAATGGACTTTGCAAATGATCAATTGAGGGCAATTGCGGATTGGCCAAAGGAGAAGCGTGCAACGGAGGTCGAATTGCGTGCTGAAGTCGTGAAACAACTGGATGATATCCCTGAACTACGGAGTCGAGATAGGGTAAAGCTTCTGCGAATATTATTCCGTAGTGTTGATGACACACAGGGATTCCTGTCGGTCCCATCGGAACTGAAATTGGAGTACTGCAGTATTTTGTTGGAAGAAAATGTTTGA

mRNA sequence

ATGGCAAGTTCTTCACGAGCACCCAAACACACATGGACTAAAGAGGAAGAAGCGAAGTTGGTTGAGTATTTGGTGGAATTGGTTTCATCTGGCGGGTGGAGGTTAGATAATGGGACATTTCAACCTGGATATTTAGCACAGTTGCAACGGATGATGGCGGAGAAGTTGCCCGGCACTAACATCCAAGGATCACCGACTATTGATTGTCGTGTGAAATCCCTCAAGAAAACTTATCAGGCAATTGCAGAAATGAGGGGACCATCTTGTAGTGGGTTCGGGTGGAATGAAGAATATCAGTGCATCATCGCGGAACGCGACTTGTTTGATAATTGGAGTCATCCTGGGGCGAAAGGACTGTTACACAAATCATTTCCATATTATGACGATTTGTCGTACGTGTTCGGCAGAGATCGGGCAACAAGAGCACGTGCGGAGACTTTTGCTGACGTGGGATCTAATGTGCCAAACAGTTTCAACGACAGTGTTACACTTGATGATCTACATGACGAAGACATCCTGACGATGTATAGCCAAAGGGTGGATATGTCCCCAGATGACATGGTAGGAACACGTGCAGGTCGGTCAAGTGATGGACGGAACTGTTCAAGTGGGAGTAAGAGGAAACGGGGTGGCCAACATAGTGAAACAATGGAGGTGATCAGGAATGCAATGGACTTTGCAAATGATCAATTGAGGGCAATTGCGGATTGGCCAAAGGAGAAGCGTGCAACGGAGGTCGAATTGCGTGCTGAAGTCGTGAAACAACTGGATGATATCCCTGAACTACGGAGTCGAGATAGGGTAAAGCTTCTGCGAATATTATTCCGTAGTGTTGATGACACACAGGGATTCCTGTCGGTCCCATCGGAACTGAAATTGGAGTACTGCAGTATTTTGTTGGAAGAAAATGTTTGA

Coding sequence (CDS)

ATGGCAAGTTCTTCACGAGCACCCAAACACACATGGACTAAAGAGGAAGAAGCGAAGTTGGTTGAGTATTTGGTGGAATTGGTTTCATCTGGCGGGTGGAGGTTAGATAATGGGACATTTCAACCTGGATATTTAGCACAGTTGCAACGGATGATGGCGGAGAAGTTGCCCGGCACTAACATCCAAGGATCACCGACTATTGATTGTCGTGTGAAATCCCTCAAGAAAACTTATCAGGCAATTGCAGAAATGAGGGGACCATCTTGTAGTGGGTTCGGGTGGAATGAAGAATATCAGTGCATCATCGCGGAACGCGACTTGTTTGATAATTGGAGTCATCCTGGGGCGAAAGGACTGTTACACAAATCATTTCCATATTATGACGATTTGTCGTACGTGTTCGGCAGAGATCGGGCAACAAGAGCACGTGCGGAGACTTTTGCTGACGTGGGATCTAATGTGCCAAACAGTTTCAACGACAGTGTTACACTTGATGATCTACATGACGAAGACATCCTGACGATGTATAGCCAAAGGGTGGATATGTCCCCAGATGACATGGTAGGAACACGTGCAGGTCGGTCAAGTGATGGACGGAACTGTTCAAGTGGGAGTAAGAGGAAACGGGGTGGCCAACATAGTGAAACAATGGAGGTGATCAGGAATGCAATGGACTTTGCAAATGATCAATTGAGGGCAATTGCGGATTGGCCAAAGGAGAAGCGTGCAACGGAGGTCGAATTGCGTGCTGAAGTCGTGAAACAACTGGATGATATCCCTGAACTACGGAGTCGAGATAGGGTAAAGCTTCTGCGAATATTATTCCGTAGTGTTGATGACACACAGGGATTCCTGTCGGTCCCATCGGAACTGAAATTGGAGTACTGCAGTATTTTGTTGGAAGAAAATGTTTGA

Protein sequence

MASSSRAPKHTWTKEEEAKLVEYLVELVSSGGWRLDNGTFQPGYLAQLQRMMAEKLPGTNIQGSPTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCIIAERDLFDNWSHPGAKGLLHKSFPYYDDLSYVFGRDRATRARAETFADVGSNVPNSFNDSVTLDDLHDEDILTMYSQRVDMSPDDMVGTRAGRSSDGRNCSSGSKRKRGGQHSETMEVIRNAMDFANDQLRAIADWPKEKRATEVELRAEVVKQLDDIPELRSRDRVKLLRILFRSVDDTQGFLSVPSELKLEYCSILLEENV
Homology
BLAST of PI0025703 vs. ExPASy TrEMBL
Match: A0A5A7U0H7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G002060 PE=4 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 2.4e-133
Identity = 238/306 (77.78%), Postives = 268/306 (87.58%), Query Frame = 0

Query: 1   MASSSRAPKHTWTKEEEAKLVEYLVELVSSGGWRLDNGTFQPGYLAQLQRMMAEKLPGTN 60
           MAS SRAPKHTWTKEEE K VE LVELVSSGGWR DNGTFQPGYLAQLQRMMAEKLPGTN
Sbjct: 1   MASLSRAPKHTWTKEEEEKFVECLVELVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTN 60

Query: 61  IQGSPTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCIIAERDLFDNW--SHPGAKG 120
           IQ S TIDC VKSLKKTY AIAEMRGPSCSGFGWNEE+QCIIAERDLFD+W  SHP AKG
Sbjct: 61  IQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKG 120

Query: 121 LLHKSFPYYDDLSYVFGRDRATRARAETFADVGSNVPNSFNDSVTLDDLHDEDILTMYSQ 180
           LLHKSFPYYDDLSYVFG+DRAT AR+ETF +VGSNV N FND++ L D HDEDI TMYSQ
Sbjct: 121 LLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQ 180

Query: 181 RVDMSPDDMVGTRAGRSSDGRNCSSGSKRKRGGQHSETMEVIRNAMDFANDQLRAIADWP 240
            V MSPD+M G RAG++S+ RNCSS SKRKRG +  ET+EVIR+ M+F N+QL+AIADWP
Sbjct: 181 GVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGNEQLKAIADWP 240

Query: 241 KEKRATEVELRAEVVKQLDDIPELRSRDRVKLLRILFRSVDDTQGFLSVPSELKLEYCSI 300
           KEKRA EVE+RA+VVKQL DIP+LRS+DR KL++ILFRS++  +GFLS+P+ELKLEYC+I
Sbjct: 241 KEKRAMEVEMRAQVVKQLQDIPKLRSQDRAKLMQILFRSLEAIEGFLSIPTELKLEYCNI 300

Query: 301 LLEENV 305
           LL+  V
Sbjct: 301 LLQNIV 306

BLAST of PI0025703 vs. ExPASy TrEMBL
Match: A0A1S3B4L3 (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 2.4e-133
Identity = 238/306 (77.78%), Postives = 268/306 (87.58%), Query Frame = 0

Query: 1   MASSSRAPKHTWTKEEEAKLVEYLVELVSSGGWRLDNGTFQPGYLAQLQRMMAEKLPGTN 60
           MAS SRAPKHTWTKEEE K VE LVELVSSGGWR DNGTFQPGYLAQLQRMMAEKLPGTN
Sbjct: 1   MASLSRAPKHTWTKEEEEKFVECLVELVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTN 60

Query: 61  IQGSPTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCIIAERDLFDNW--SHPGAKG 120
           IQ S TIDC VKSLKKTY AIAEMRGPSCSGFGWNEE+QCIIAERDLFD+W  SHP AKG
Sbjct: 61  IQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKG 120

Query: 121 LLHKSFPYYDDLSYVFGRDRATRARAETFADVGSNVPNSFNDSVTLDDLHDEDILTMYSQ 180
           LLHKSFPYYDDLSYVFG+DRAT AR+ETF +VGSNV N FND++ L D HDEDI TMYSQ
Sbjct: 121 LLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQ 180

Query: 181 RVDMSPDDMVGTRAGRSSDGRNCSSGSKRKRGGQHSETMEVIRNAMDFANDQLRAIADWP 240
            V MSPD+M G RAG++S+ RNCSS SKRKRG +  ET+EVIR+ M+F N+QL+AIADWP
Sbjct: 181 GVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGNEQLKAIADWP 240

Query: 241 KEKRATEVELRAEVVKQLDDIPELRSRDRVKLLRILFRSVDDTQGFLSVPSELKLEYCSI 300
           KEKRA EVE+RA+VVKQL DIP+LRS+DR KL++ILFRS++  +GFLS+P+ELKLEYC+I
Sbjct: 241 KEKRAMEVEMRAQVVKQLQDIPKLRSQDRAKLMQILFRSLEAIEGFLSIPTELKLEYCNI 300

Query: 301 LLEENV 305
           LL+  V
Sbjct: 301 LLQNIV 306

BLAST of PI0025703 vs. ExPASy TrEMBL
Match: A0A5D3BZU3 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G00280 PE=4 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 3.5e-100
Identity = 197/304 (64.80%), Postives = 223/304 (73.36%), Query Frame = 0

Query: 1   MASSSRAPKHTWTKEEEAKLVEYLVELVSSGGWRLDNGTFQPGYLAQLQRMMAEKLPGTN 60
           MASSSRA KH WTKEEEAKLVE LVELVS+GGWR DNGTF+ GYL QLQRMMAEKLP TN
Sbjct: 1   MASSSRATKHAWTKEEEAKLVECLVELVSAGGWRSDNGTFRHGYLTQLQRMMAEKLPDTN 60

Query: 61  IQGSPTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCIIAERDLFDNWSHPGAKGLL 120
           IQGSPTIDCR                                         SHP AKGLL
Sbjct: 61  IQGSPTIDCR-----------------------------------------SHPAAKGLL 120

Query: 121 HKSFPYYDDLSYVFGRDRATRARAETFADVGSNVPNSFNDSVTLDDLHDEDILTMYSQRV 180
           HKSFPYYDDLSYVFG D AT A +ETFAD GSNV N FND V L D H++DILT+YSQ V
Sbjct: 121 HKSFPYYDDLSYVFGNDGATGAHSETFADGGSNVSNMFNDGVPLGDSHNQDILTIYSQGV 180

Query: 181 DMSPDDMVGTRAGRSSDGRNCSSGSKRKRGGQHSETMEVIRNAMDFANDQLRAIADWPKE 240
            MS D++ G RAG++S+ RN SSGSKRKRG +H E +EVI +A +F NDQL+ I DWPKE
Sbjct: 181 HMSLDEIFGIRAGQASERRNYSSGSKRKRGSKHYEMVEVISSATEFGNDQLKTITDWPKE 240

Query: 241 KRATEVELRAEVVKQLDDIPELRSRDRVKLLRILFRSVDDTQGFLSVPSELKLEYCSILL 300
           KRATEVELR EVVKQL DIP+LRS+DR KL++ILFRSV+  +GFLS+P++LKLEYC+ILL
Sbjct: 241 KRATEVELRTEVVKQLQDIPQLRSQDRAKLMQILFRSVEAIEGFLSIPTKLKLEYCNILL 263

Query: 301 EENV 305
           E NV
Sbjct: 301 ENNV 263

BLAST of PI0025703 vs. ExPASy TrEMBL
Match: A0A5D3DPR5 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold259G00580 PE=4 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 8.5e-99
Identity = 177/303 (58.42%), Postives = 233/303 (76.90%), Query Frame = 0

Query: 1   MASSSRAPKHTWTKEEEAKLVEYLVELVSSGGWRLDNGTFQPGYLAQLQRMMAEKLPGTN 60
           M SSSR PKHTWTKEEEA LVE LVELV++GGWR DNGTF+PGYL QL RMMA K+PG+N
Sbjct: 1   MTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSN 60

Query: 61  IQGSPTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCIIAERDLFDNWSHPGAKGLL 120
           I  S TID R+K +K+ + A+AEMRGP+CSGFGWN+E +CI+AE+++FD+WSHP AKGLL
Sbjct: 61  IHAS-TIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDWSHPAAKGLL 120

Query: 121 HKSFPYYDDLSYVFGRDRATRARAETFADVGSNVPNSFNDSVTLDDLHDEDILTMYSQRV 180
           +KSF +YD+LSYVFG+DRAT  RAE+FAD+GSN P  + D+V  D + D D   MYS  +
Sbjct: 121 NKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGY-DAVAADAMPDTDFPPMYSPGL 180

Query: 181 DMSPDDMVGTRAGRSSDGRNCSSGSKRKRGGQHSETMEVIRNAMDFANDQLRAIADWPKE 240
           +MSPDD++ TR  R S+ RN SSGSKRKR G  +++ +++R A+++ N+QL  IA+WP  
Sbjct: 181 NMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPIL 240

Query: 241 KRATEVELRAEVVKQLDDIPELRSRDRVKLLRILFRSVDDTQGFLSVPSELKLEYCSILL 300
           +R    + R E+V+ L+ IPEL   DR +L+RIL R+VDD + FL VP  +K  YCS++L
Sbjct: 241 QRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLIL 300

Query: 301 EEN 304
           +EN
Sbjct: 301 QEN 301

BLAST of PI0025703 vs. ExPASy TrEMBL
Match: A0A5A7UME4 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold615G00290 PE=4 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 4.2e-98
Identity = 176/303 (58.09%), Postives = 232/303 (76.57%), Query Frame = 0

Query: 1   MASSSRAPKHTWTKEEEAKLVEYLVELVSSGGWRLDNGTFQPGYLAQLQRMMAEKLPGTN 60
           M SSSR PKHTWTKEEEA LVE LVELV++GGWR DNGTF+PGYL QL RMMA K+PG+N
Sbjct: 1   MTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSN 60

Query: 61  IQGSPTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCIIAERDLFDNWSHPGAKGLL 120
           I  S TID R+K +K+ + A+AEMRGP+CSGFGWN+E +CI+AE+++FD+WSHP AKGLL
Sbjct: 61  IHAS-TIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDWSHPAAKGLL 120

Query: 121 HKSFPYYDDLSYVFGRDRATRARAETFADVGSNVPNSFNDSVTLDDLHDEDILTMYSQRV 180
           +KSF +YD+LSYVFG+DRAT  RAE+FAD+GSN P  + D+   D + D D   MYS  +
Sbjct: 121 NKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGY-DAEAADAMPDTDFPPMYSPGL 180

Query: 181 DMSPDDMVGTRAGRSSDGRNCSSGSKRKRGGQHSETMEVIRNAMDFANDQLRAIADWPKE 240
           +MSPDD++ TR  R S+ RN SSGSKRKR G  +++ +++R A+++ N+QL  IA+WP  
Sbjct: 181 NMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPIL 240

Query: 241 KRATEVELRAEVVKQLDDIPELRSRDRVKLLRILFRSVDDTQGFLSVPSELKLEYCSILL 300
           +R    + R E+V+ L+ IPEL   DR +L+RIL R+VDD + FL VP  +K  YCS++L
Sbjct: 241 QRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLIL 300

Query: 301 EEN 304
           +EN
Sbjct: 301 QEN 301

BLAST of PI0025703 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo] >KAA0047736.1 retrotransposon protein [Cucumis melo var. makuwa] >TYK08388.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 485.0 bits (1247), Expect = 4.9e-133
Identity = 238/306 (77.78%), Postives = 268/306 (87.58%), Query Frame = 0

Query: 1   MASSSRAPKHTWTKEEEAKLVEYLVELVSSGGWRLDNGTFQPGYLAQLQRMMAEKLPGTN 60
           MAS SRAPKHTWTKEEE K VE LVELVSSGGWR DNGTFQPGYLAQLQRMMAEKLPGTN
Sbjct: 1   MASLSRAPKHTWTKEEEEKFVECLVELVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTN 60

Query: 61  IQGSPTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCIIAERDLFDNW--SHPGAKG 120
           IQ S TIDC VKSLKKTY AIAEMRGPSCSGFGWNEE+QCIIAERDLFD+W  SHP AKG
Sbjct: 61  IQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKG 120

Query: 121 LLHKSFPYYDDLSYVFGRDRATRARAETFADVGSNVPNSFNDSVTLDDLHDEDILTMYSQ 180
           LLHKSFPYYDDLSYVFG+DRAT AR+ETF +VGSNV N FND++ L D HDEDI TMYSQ
Sbjct: 121 LLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQ 180

Query: 181 RVDMSPDDMVGTRAGRSSDGRNCSSGSKRKRGGQHSETMEVIRNAMDFANDQLRAIADWP 240
            V MSPD+M G RAG++S+ RNCSS SKRKRG +  ET+EVIR+ M+F N+QL+AIADWP
Sbjct: 181 GVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGNEQLKAIADWP 240

Query: 241 KEKRATEVELRAEVVKQLDDIPELRSRDRVKLLRILFRSVDDTQGFLSVPSELKLEYCSI 300
           KEKRA EVE+RA+VVKQL DIP+LRS+DR KL++ILFRS++  +GFLS+P+ELKLEYC+I
Sbjct: 241 KEKRAMEVEMRAQVVKQLQDIPKLRSQDRAKLMQILFRSLEAIEGFLSIPTELKLEYCNI 300

Query: 301 LLEENV 305
           LL+  V
Sbjct: 301 LLQNIV 306

BLAST of PI0025703 vs. NCBI nr
Match: KAA0031678.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK04432.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 374.8 bits (961), Expect = 7.1e-100
Identity = 197/304 (64.80%), Postives = 223/304 (73.36%), Query Frame = 0

Query: 1   MASSSRAPKHTWTKEEEAKLVEYLVELVSSGGWRLDNGTFQPGYLAQLQRMMAEKLPGTN 60
           MASSSRA KH WTKEEEAKLVE LVELVS+GGWR DNGTF+ GYL QLQRMMAEKLP TN
Sbjct: 1   MASSSRATKHAWTKEEEAKLVECLVELVSAGGWRSDNGTFRHGYLTQLQRMMAEKLPDTN 60

Query: 61  IQGSPTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCIIAERDLFDNWSHPGAKGLL 120
           IQGSPTIDCR                                         SHP AKGLL
Sbjct: 61  IQGSPTIDCR-----------------------------------------SHPAAKGLL 120

Query: 121 HKSFPYYDDLSYVFGRDRATRARAETFADVGSNVPNSFNDSVTLDDLHDEDILTMYSQRV 180
           HKSFPYYDDLSYVFG D AT A +ETFAD GSNV N FND V L D H++DILT+YSQ V
Sbjct: 121 HKSFPYYDDLSYVFGNDGATGAHSETFADGGSNVSNMFNDGVPLGDSHNQDILTIYSQGV 180

Query: 181 DMSPDDMVGTRAGRSSDGRNCSSGSKRKRGGQHSETMEVIRNAMDFANDQLRAIADWPKE 240
            MS D++ G RAG++S+ RN SSGSKRKRG +H E +EVI +A +F NDQL+ I DWPKE
Sbjct: 181 HMSLDEIFGIRAGQASERRNYSSGSKRKRGSKHYEMVEVISSATEFGNDQLKTITDWPKE 240

Query: 241 KRATEVELRAEVVKQLDDIPELRSRDRVKLLRILFRSVDDTQGFLSVPSELKLEYCSILL 300
           KRATEVELR EVVKQL DIP+LRS+DR KL++ILFRSV+  +GFLS+P++LKLEYC+ILL
Sbjct: 241 KRATEVELRTEVVKQLQDIPQLRSQDRAKLMQILFRSVEAIEGFLSIPTKLKLEYCNILL 263

Query: 301 EENV 305
           E NV
Sbjct: 301 ENNV 263

BLAST of PI0025703 vs. NCBI nr
Match: KAA0035621.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0041647.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0046728.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0052099.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0054495.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 370.2 bits (949), Expect = 1.8e-98
Identity = 177/303 (58.42%), Postives = 233/303 (76.90%), Query Frame = 0

Query: 1   MASSSRAPKHTWTKEEEAKLVEYLVELVSSGGWRLDNGTFQPGYLAQLQRMMAEKLPGTN 60
           M SSSR PKHTWTKEEEA LVE LVELV++GGWR DNGTF+PGYL QL RMMA K+PG+N
Sbjct: 1   MTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSN 60

Query: 61  IQGSPTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCIIAERDLFDNWSHPGAKGLL 120
           I  S TID R+K +K+ + A+AEMRGP+CSGFGWN+E +CI+AE+++FD+WSHP AKGLL
Sbjct: 61  IHAS-TIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDWSHPAAKGLL 120

Query: 121 HKSFPYYDDLSYVFGRDRATRARAETFADVGSNVPNSFNDSVTLDDLHDEDILTMYSQRV 180
           +KSF +YD+LSYVFG+DRAT  RAE+FAD+GSN P  + D+V  D + D D   MYS  +
Sbjct: 121 NKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGY-DAVAADAMPDTDFPPMYSPGL 180

Query: 181 DMSPDDMVGTRAGRSSDGRNCSSGSKRKRGGQHSETMEVIRNAMDFANDQLRAIADWPKE 240
           +MSPDD++ TR  R S+ RN SSGSKRKR G  +++ +++R A+++ N+QL  IA+WP  
Sbjct: 181 NMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPIL 240

Query: 241 KRATEVELRAEVVKQLDDIPELRSRDRVKLLRILFRSVDDTQGFLSVPSELKLEYCSILL 300
           +R    + R E+V+ L+ IPEL   DR +L+RIL R+VDD + FL VP  +K  YCS++L
Sbjct: 241 QRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLIL 300

Query: 301 EEN 304
           +EN
Sbjct: 301 QEN 301

BLAST of PI0025703 vs. NCBI nr
Match: KAA0057083.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK09001.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 367.9 bits (943), Expect = 8.7e-98
Identity = 176/303 (58.09%), Postives = 232/303 (76.57%), Query Frame = 0

Query: 1   MASSSRAPKHTWTKEEEAKLVEYLVELVSSGGWRLDNGTFQPGYLAQLQRMMAEKLPGTN 60
           M SSSR PKHTWTKEEEA LVE LVELV++GGWR DNGTF+PGYL QL RMMA K+PG+N
Sbjct: 1   MTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSN 60

Query: 61  IQGSPTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCIIAERDLFDNWSHPGAKGLL 120
           I  S TID R+K +K+ + A+AEMRGP+CSGFGWN+E +CI+AE+++FD+WSHP AKGLL
Sbjct: 61  IHAS-TIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDWSHPAAKGLL 120

Query: 121 HKSFPYYDDLSYVFGRDRATRARAETFADVGSNVPNSFNDSVTLDDLHDEDILTMYSQRV 180
           +KSF +YD+LSYVFG+DRAT  RAE+FAD+GSN P  + D+   D + D D   MYS  +
Sbjct: 121 NKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGY-DAEAADAMPDTDFPPMYSPGL 180

Query: 181 DMSPDDMVGTRAGRSSDGRNCSSGSKRKRGGQHSETMEVIRNAMDFANDQLRAIADWPKE 240
           +MSPDD++ TR  R S+ RN SSGSKRKR G  +++ +++R A+++ N+QL  IA+WP  
Sbjct: 181 NMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPIL 240

Query: 241 KRATEVELRAEVVKQLDDIPELRSRDRVKLLRILFRSVDDTQGFLSVPSELKLEYCSILL 300
           +R    + R E+V+ L+ IPEL   DR +L+RIL R+VDD + FL VP  +K  YCS++L
Sbjct: 241 QRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLIL 300

Query: 301 EEN 304
           +EN
Sbjct: 301 QEN 301

BLAST of PI0025703 vs. NCBI nr
Match: KAA0038122.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0047362.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0055248.1 retrotransposon protein [Cucumis melo var. makuwa] >TYJ97185.1 retrotransposon protein [Cucumis melo var. makuwa] >TYK00369.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 367.5 bits (942), Expect = 1.1e-97
Identity = 176/303 (58.09%), Postives = 232/303 (76.57%), Query Frame = 0

Query: 1   MASSSRAPKHTWTKEEEAKLVEYLVELVSSGGWRLDNGTFQPGYLAQLQRMMAEKLPGTN 60
           M SSSR PKHTWTKEEEA LVE LVELV++GGWR DNGTF+PGYL QL RMMA K+PG+N
Sbjct: 1   MTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSN 60

Query: 61  IQGSPTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCIIAERDLFDNWSHPGAKGLL 120
           I  S TID R+K +K+ + A+AEMRGP+CSGFGWN+E +CI+AE+++FD+WSHP AKGLL
Sbjct: 61  IHAS-TIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDWSHPAAKGLL 120

Query: 121 HKSFPYYDDLSYVFGRDRATRARAETFADVGSNVPNSFNDSVTLDDLHDEDILTMYSQRV 180
           +KSF +YD+LSYVFG+DRAT  RAE+FAD+GSN P  + D+   D + D D   MYS  +
Sbjct: 121 NKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGY-DAGAADAMPDTDFPPMYSPGL 180

Query: 181 DMSPDDMVGTRAGRSSDGRNCSSGSKRKRGGQHSETMEVIRNAMDFANDQLRAIADWPKE 240
           +MSPDD++ TR  R S+ RN SSGSKRKR G  +++ +++R A+++ N+QL  IA+WP  
Sbjct: 181 NMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPIL 240

Query: 241 KRATEVELRAEVVKQLDDIPELRSRDRVKLLRILFRSVDDTQGFLSVPSELKLEYCSILL 300
           +R    + R E+V+ L+ IPEL   DR +L+RIL R+VDD + FL VP  +K  YCS++L
Sbjct: 241 QRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLIL 300

Query: 301 EEN 304
           +EN
Sbjct: 301 QEN 301

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7U0H72.4e-13377.78Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3B4L32.4e-13377.78uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=... [more]
A0A5D3BZU33.5e-10064.80Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3DPR58.5e-9958.42Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7UME44.2e-9858.09Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
XP_008441954.14.9e-13377.78PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo] >KAA0047736.1 ret... [more]
KAA0031678.17.1e-10064.80retrotransposon protein [Cucumis melo var. makuwa] >TYK04432.1 retrotransposon p... [more]
KAA0035621.11.8e-9858.42retrotransposon protein [Cucumis melo var. makuwa] >KAA0041647.1 retrotransposon... [more]
KAA0057083.18.7e-9858.09retrotransposon protein [Cucumis melo var. makuwa] >TYK09001.1 retrotransposon p... [more]
KAA0038122.11.1e-9758.09retrotransposon protein [Cucumis melo var. makuwa] >KAA0047362.1 retrotransposon... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024752Myb/SANT-like domainPFAMPF12776Myb_DNA-bind_3coord: 11..109
e-value: 6.4E-7
score: 30.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 184..214
NoneNo IPR availablePANTHERPTHR46250MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATEDcoord: 3..296
NoneNo IPR availablePANTHERPTHR46250:SF3MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEINcoord: 3..296

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0025703.1PI0025703.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane